NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F089427

Metagenome Family F089427

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089427
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 65 residues
Representative Sequence MTWVIVQQCKDCGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYDTVDEVKEDYANTLNIMLTN
Number of Associated Samples 78
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 78.90 %
% of genes near scaffold ends (potentially truncated) 22.02 %
% of genes from short scaffolds (< 2000 bps) 80.73 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (59.633 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(38.532 % of family members)
Environment Ontology (ENVO) Unclassified
(87.156 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.569 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 22.34%    Coil/Unstructured: 77.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF06067DUF932 11.93
PF02195ParBc 3.67
PF07486Hydrolase_2 1.83
PF13385Laminin_G_3 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 1.83


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.63 %
All OrganismsrootAll Organisms40.37 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10002675All Organisms → cellular organisms → Bacteria13573Open in IMG/M
3300000101|DelMOSum2010_c10268582Not Available526Open in IMG/M
3300000115|DelMOSum2011_c10132880Not Available761Open in IMG/M
3300000116|DelMOSpr2010_c10193039Not Available658Open in IMG/M
3300001450|JGI24006J15134_10028297All Organisms → Viruses → Predicted Viral2489Open in IMG/M
3300001450|JGI24006J15134_10034964All Organisms → Viruses → Predicted Viral2169Open in IMG/M
3300001450|JGI24006J15134_10038988All Organisms → Viruses → Predicted Viral2024Open in IMG/M
3300001450|JGI24006J15134_10139200Not Available811Open in IMG/M
3300001450|JGI24006J15134_10174627Not Available680Open in IMG/M
3300001460|JGI24003J15210_10012898All Organisms → Viruses → Predicted Viral3326Open in IMG/M
3300001472|JGI24004J15324_10150667Not Available538Open in IMG/M
3300001589|JGI24005J15628_10003721All Organisms → cellular organisms → Bacteria7684Open in IMG/M
3300001589|JGI24005J15628_10044183All Organisms → Viruses → Predicted Viral1771Open in IMG/M
3300001589|JGI24005J15628_10182012Not Available606Open in IMG/M
3300004097|Ga0055584_100455485All Organisms → Viruses → Predicted Viral1328Open in IMG/M
3300004460|Ga0066222_1110665All Organisms → Viruses → Predicted Viral1563Open in IMG/M
3300006164|Ga0075441_10073547All Organisms → Viruses → Predicted Viral1329Open in IMG/M
3300006164|Ga0075441_10312136Not Available573Open in IMG/M
3300006164|Ga0075441_10314336Not Available571Open in IMG/M
3300006190|Ga0075446_10041365All Organisms → Viruses → Predicted Viral1455Open in IMG/M
3300006190|Ga0075446_10103921Not Available831Open in IMG/M
3300006191|Ga0075447_10052197All Organisms → Viruses → Predicted Viral1503Open in IMG/M
3300006352|Ga0075448_10169089Not Available674Open in IMG/M
3300006802|Ga0070749_10652166Not Available565Open in IMG/M
3300006867|Ga0075476_10184016Not Available767Open in IMG/M
3300006916|Ga0070750_10212878Not Available851Open in IMG/M
3300006920|Ga0070748_1155185Not Available850Open in IMG/M
3300006920|Ga0070748_1180154Not Available778Open in IMG/M
3300006920|Ga0070748_1222701Not Available684Open in IMG/M
3300006947|Ga0075444_10048981All Organisms → Viruses → Predicted Viral2008Open in IMG/M
3300006947|Ga0075444_10132791All Organisms → Viruses → Predicted Viral1058Open in IMG/M
3300007229|Ga0075468_10123405Not Available802Open in IMG/M
3300007276|Ga0070747_1168957Not Available781Open in IMG/M
3300007276|Ga0070747_1288888Not Available565Open in IMG/M
3300007344|Ga0070745_1047304All Organisms → Viruses → Predicted Viral1782Open in IMG/M
3300007346|Ga0070753_1195128Not Available751Open in IMG/M
3300008221|Ga0114916_1098707Not Available710Open in IMG/M
3300009071|Ga0115566_10075061All Organisms → Viruses → Predicted Viral2222Open in IMG/M
3300009149|Ga0114918_10015815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp.5809Open in IMG/M
3300009149|Ga0114918_10087853All Organisms → Viruses → Predicted Viral1959Open in IMG/M
3300009172|Ga0114995_10075860All Organisms → Viruses → Predicted Viral1895Open in IMG/M
3300009172|Ga0114995_10568949Not Available619Open in IMG/M
3300009173|Ga0114996_10467459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp.956Open in IMG/M
3300009409|Ga0114993_10090520All Organisms → Viruses → Predicted Viral2409Open in IMG/M
3300009409|Ga0114993_10106767All Organisms → Viruses → Predicted Viral2199Open in IMG/M
3300009420|Ga0114994_10955556Not Available555Open in IMG/M
3300009420|Ga0114994_10975459Not Available548Open in IMG/M
3300009422|Ga0114998_10195522Not Available962Open in IMG/M
3300009422|Ga0114998_10362766Not Available677Open in IMG/M
3300009476|Ga0115555_1282324Not Available671Open in IMG/M
3300009495|Ga0115571_1161689Not Available933Open in IMG/M
3300009507|Ga0115572_10044905All Organisms → Viruses → Predicted Viral2840Open in IMG/M
3300009705|Ga0115000_10505054Not Available761Open in IMG/M
3300009786|Ga0114999_10974239Not Available615Open in IMG/M
3300010300|Ga0129351_1190137Not Available800Open in IMG/M
3300010368|Ga0129324_10219077Not Available767Open in IMG/M
3300010883|Ga0133547_11495652All Organisms → Viruses → Predicted Viral1268Open in IMG/M
3300021958|Ga0222718_10160172All Organisms → Viruses → Predicted Viral1262Open in IMG/M
3300021964|Ga0222719_10170637All Organisms → Viruses → Predicted Viral1515Open in IMG/M
3300021964|Ga0222719_10411443Not Available838Open in IMG/M
3300022072|Ga0196889_1057524Not Available745Open in IMG/M
3300022169|Ga0196903_1042618Not Available527Open in IMG/M
3300022178|Ga0196887_1018099All Organisms → Viruses → Predicted Viral2126Open in IMG/M
3300022178|Ga0196887_1021463All Organisms → Viruses → Predicted Viral1908Open in IMG/M
(restricted) 3300022933|Ga0233427_10245370Not Available770Open in IMG/M
3300024262|Ga0210003_1013483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp.5394Open in IMG/M
3300024262|Ga0210003_1039749All Organisms → Viruses → Predicted Viral2512Open in IMG/M
3300024262|Ga0210003_1351885Not Available548Open in IMG/M
3300025045|Ga0207901_1022718Not Available858Open in IMG/M
3300025071|Ga0207896_1003313All Organisms → Viruses → Predicted Viral3026Open in IMG/M
3300025079|Ga0207890_1009864All Organisms → Viruses → Predicted Viral2035Open in IMG/M
3300025120|Ga0209535_1045751Not Available1910Open in IMG/M
3300025120|Ga0209535_1055197All Organisms → Viruses → Predicted Viral1662Open in IMG/M
3300025120|Ga0209535_1150573Not Available734Open in IMG/M
3300025120|Ga0209535_1187305Not Available601Open in IMG/M
3300025138|Ga0209634_1100541All Organisms → Viruses → Predicted Viral1280Open in IMG/M
3300025138|Ga0209634_1256188Not Available630Open in IMG/M
3300025168|Ga0209337_1188362All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp.852Open in IMG/M
3300025237|Ga0208031_1014771All Organisms → Viruses → Predicted Viral1061Open in IMG/M
3300025237|Ga0208031_1015260Not Available1044Open in IMG/M
3300025276|Ga0208814_1069679Not Available964Open in IMG/M
3300025287|Ga0207903_1070022Not Available605Open in IMG/M
3300025652|Ga0208134_1082315Not Available928Open in IMG/M
3300025853|Ga0208645_1123908Not Available1026Open in IMG/M
3300025869|Ga0209308_10125960Not Available1205Open in IMG/M
3300025890|Ga0209631_10005159All Organisms → cellular organisms → Bacteria13963Open in IMG/M
3300027522|Ga0209384_1024415All Organisms → Viruses → Predicted Viral1867Open in IMG/M
3300027522|Ga0209384_1104040Not Available671Open in IMG/M
3300027668|Ga0209482_1036370All Organisms → Viruses → Predicted Viral1924Open in IMG/M
3300027686|Ga0209071_1137321Not Available701Open in IMG/M
3300027687|Ga0209710_1264602Not Available549Open in IMG/M
3300027714|Ga0209815_1070090All Organisms → Viruses → Predicted Viral1218Open in IMG/M
3300027788|Ga0209711_10347059Not Available626Open in IMG/M
3300027838|Ga0209089_10154351Not Available1379Open in IMG/M
3300027839|Ga0209403_10025463All Organisms → Viruses → Predicted Viral4868Open in IMG/M
(restricted) 3300027881|Ga0255055_10401100Not Available738Open in IMG/M
3300028125|Ga0256368_1015525All Organisms → Viruses → Predicted Viral1322Open in IMG/M
3300029787|Ga0183757_1000072Not Available57842Open in IMG/M
3300031596|Ga0302134_10269649Not Available659Open in IMG/M
3300031605|Ga0302132_10175047Not Available1046Open in IMG/M
3300031622|Ga0302126_10286667Not Available559Open in IMG/M
3300031623|Ga0302123_10434656Not Available600Open in IMG/M
3300031627|Ga0302118_10217867All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sneathiellales → Sneathiellaceae → Sneathiella → unclassified Sneathiella → Sneathiella sp.908Open in IMG/M
3300031638|Ga0302125_10179046Not Available664Open in IMG/M
3300033742|Ga0314858_158562Not Available581Open in IMG/M
3300033742|Ga0314858_197349Not Available516Open in IMG/M
3300034375|Ga0348336_019575All Organisms → Viruses → Predicted Viral3565Open in IMG/M
3300034375|Ga0348336_103541Not Available958Open in IMG/M
3300034654|Ga0326741_062394Not Available623Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine38.53%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous17.43%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine13.76%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean4.59%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface4.59%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine4.59%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.67%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine2.75%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.75%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.83%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.83%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.83%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.92%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater0.92%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022933 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MGEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025071Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)EnvironmentalOpen in IMG/M
3300025079Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025237Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025287Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027686Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031596Marine microbial communities from Western Arctic Ocean, Canada - CB9_SCMEnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M
3300031622Marine microbial communities from Western Arctic Ocean, Canada - CB4_20mEnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031638Marine microbial communities from Western Arctic Ocean, Canada - CB4_surfaceEnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_10002675213300000101MarineMTWVIVQQCKDCGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYKTIDEVKEDYANTLNIMLTN*
DelMOSum2010_1026858213300000101MarineMTWVIVQKCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN*
DelMOSum2011_1013288023300000115MarineMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNIMLTN*
DelMOSpr2010_1019303933300000116MarineMTWIIVQQCKDCSGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYKTIDEVKKDYSNTLNIMLTN*
JGI24006J15134_1002829733300001450MarineMTWFIVQECKDCSGQGKLYGYNTIPDTCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTK*
JGI24006J15134_1003496473300001450MarineMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLTVMLTN*
JGI24006J15134_1003898823300001450MarineVTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNVMLTN*
JGI24006J15134_1013920043300001450MarineMTWVIVQECKDCSGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYKTIDEVKKDYSNTLNVMLTN*
JGI24006J15134_1017462723300001450MarineMTWIIVQQCKDCSGQGKLYGYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKKDYSNTLNIMLTN*
JGI24003J15210_1001289883300001460MarineMWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNVMLTN*
JGI24004J15324_1015066733300001472MarineMTWVIVQECKDCSGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYKTIDEVKKDYSNTL
JGI24005J15628_10003721143300001589MarineMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLNVMLTKHS*
JGI24005J15628_1004418353300001589MarineDMTWIIVQQCKDCSGQGKLYGYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKKDYSNTLNIMLTN*
JGI24005J15628_1018201213300001589MarineCSGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYKTIDEVKKDYSNTLNVMLTN*
Ga0055584_10045548553300004097Pelagic MarineCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDFSNTLTIMLTKHS*
Ga0066222_111066543300004460MarineMTWVIVQQCVDCGGHGELYSYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKKDYSNTLNVMLTN*
Ga0075441_1007354723300006164MarineMTWVIVQQCKDCSGQGKLYGYNTTPDTCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLNIMLTN*
Ga0075441_1031213623300006164MarineMTWIIVQECEDCSGQGKLYGYNTTPNKCHECEGTGKKEYHEENYQYDTVDDVKEDYSNTLNVMLTN*
Ga0075441_1031433633300006164MarineVTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNTLNVMLTN*
Ga0075446_1004136533300006190MarineMTWVIVQQCVDCSGQGKLYGYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKEDYANTLNVMLTN*
Ga0075446_1010392133300006190MarineMTWVIVQECKDCSGRGKLYSYNTIPNKCHECEGTGKKEYHEKTYQYKTVDEVKEDYSNTLTVLLTN*
Ga0075447_1005219753300006191MarineMTWVIVQQCVDCGGQGELYSYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKKDYSNTLNVMLTN*
Ga0075448_1016908913300006352MarineGRGKLYSYNTIPNKCHECEGTGKKEYHEKTYQYKTVDEVKEDYSNTLTVLLTN*
Ga0070749_1065216633300006802AqueousMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN*
Ga0075476_1018401633300006867AqueousMTWVIVQQCKDGGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYKTIDEVKEDYANTLNIMLTN*
Ga0070750_1021287813300006916AqueousMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVMLTN*
Ga0070748_115518513300006920AqueousMWVIVQQCEDCSGQGKLYGYSTTTDTCHECEGNGETEWYEENYQYDTVDDVKEDYSNPLTVMLTN*
Ga0070748_118015423300006920AqueousMTWVIVQKCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNIMLTN*
Ga0070748_122270113300006920AqueousCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN*
Ga0075444_1004898153300006947MarineMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNVMLTN*
Ga0075444_1013279153300006947MarineVIVQQCVDCSGQGKLYGYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKKDYSNTLNVMLTN*
Ga0075468_1012340523300007229AqueousMGVNGMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNIMLTN*
Ga0070747_116895743300007276AqueousMTWIIVQECKDCGGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYDTVDEVKEDYANTLNIMLTN*
Ga0070747_128888823300007276AqueousMTWIIVQQCKDCSGQGKLYGYNTTPDTCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLNIMLTN*
Ga0070745_104730453300007344AqueousMTWVIVQQCKDCGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYDTVDEVKEDYANTLNIMLTN*
Ga0070753_119512833300007346AqueousYNYCYAEMGVNGMTWVIVQECKDCSGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYKTIDEVKEDYANTLNIMLTN*
Ga0114916_109870723300008221Deep OceanMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDYANTLNVMLTN*
Ga0115566_1007506153300009071Pelagic MarineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDFSNTLTIMLTKHS*
Ga0114918_10015815123300009149Deep SubsurfaceMWVIVEECKDCAGQGKLYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNTLNIMLTN*
Ga0114918_1008785323300009149Deep SubsurfaceMWVIVQQCEDCSGQGKLYGYNTIPDTCHECEGTGEREWYEATYHYETKEGVKKDYSNTSSITLT*
Ga0114995_1007586053300009172MarineMTWVIVQECKDCSGQGKLYKYNTTPNKCYECEGTGEKEWYEENYQYKTVDEVKEDYSNTLTVMLTN*
Ga0114995_1056894923300009172MarineMTWVIVQECKDCSGRGKLYSYNTTPNKCHECEGTGEREWYEETYHYETKEGVKKDYSNTSSITLT*
Ga0114996_1046745943300009173MarineMTWFIVQECKDCSGQGKLYGYNTTPDKCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTN*
Ga0114993_1009052073300009409MarineMGVNGMTWFIVQECKDCSGQGKLYGYNTKPDTCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTN*
Ga0114993_1010676773300009409MarineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN*
Ga0114994_1095555633300009420MarineMTWIIVQECKDCSGQGKLYKYNTTPNKCYECEGTGEKEWYEENYQYKTVDEVKEDYSNTLTVMLTN*
Ga0114994_1097545933300009420MarineTWILVQECKDCSGQGKLYKYNTTPNKCHECEGTGEREWYEETYHYETKEGVKKDYSNTSSITLT*
Ga0114998_1019552233300009422MarineMTWVIVQECKDCSGQGKLYKYNTTPNKCHECEGTGEREWYEETYHYETKEGVKKDYSNTSSITLT*
Ga0114998_1036276613300009422MarineMTWVIVQECKDCSGRGKLYSYNTTPNKCYECEGTGKKEYYEKTYQYKTVDEVKEDYSNTLTVMLTN*
Ga0115555_128232423300009476Pelagic MarineMWVIVEECEDCAGQGKLYGYNTTPDTCYECEGTGEKEYYEENYQYDTVDEVKEDFSNTLTIMLTKHS*
Ga0115571_116168933300009495Pelagic MarineMTWVIVQECEDCSGQGKLYGYYTTPNKCHECEGTGEKEYYEENYQYKTVDEVKEDYSNTLTVMLTN*
Ga0115572_1004490543300009507Pelagic MarineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYKTVDEVKEDYSNTLTVMLTN*
Ga0115000_1050505423300009705MarineMTWIIVQECKDCSGQGKLYKYNTTPNKCHECEGTGEREWYEETYHYETKEGVKKDYSNTSSITLT*
Ga0114999_1097423923300009786MarineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVMLTN*
Ga0129351_119013723300010300Freshwater To Marine Saline GradientMGVNGMTWVIVQQCKDCGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYKTIDEVKEDYANTLNIMLTN*
Ga0129324_1021907723300010368Freshwater To Marine Saline GradientMTWVIVQQCKDCGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYKTIDEVKEDSANTLNIMLTN*
Ga0133547_1149565253300010883MarineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNTLNVMLTKHS*
Ga0222718_1016017243300021958Estuarine WaterMWVIVQQCEDCSGQGKLYSYYTTPHKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNSLTVMLTN
Ga0222719_1017063713300021964Estuarine WaterKIKMTWVIVQQCEDCSGQGKLYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVMLTN
Ga0222719_1041144343300021964Estuarine WaterMWVIVQQCEDCSGQGKLYSYYTTPHKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNSLT
Ga0196889_105752433300022072AqueousMTWVIVQQCKDCGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYKTIDEVKEDYANTLNIMLTN
Ga0196903_104261813300022169AqueousCKDCGGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYDTVDEVKEDYANTLNIMLTN
Ga0196887_101809913300022178AqueousMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNIMLTN
Ga0196887_102146333300022178AqueousMTWVIVQKCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN
(restricted) Ga0233427_1024537033300022933SeawaterMWVIVKQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNVMLTN
Ga0210003_101348343300024262Deep SubsurfaceMWVIVEECKDCAGQGKLYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNTLNIMLTN
Ga0210003_103974963300024262Deep SubsurfaceMWVIVQQCEDCSGQGKLYGYNTIPDTCHECEGTGEREWYEATYHYETKEGVKKDYSNTSSITLT
Ga0210003_135188523300024262Deep SubsurfaceMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVMLTN
Ga0207901_102271843300025045MarineMTWFIVQECKDCSGQGKLYGYNTIPDTCYECEGTGEREYYEASHHYETKAEVKED
Ga0207896_100331333300025071MarineMTWIIVQQCKDCSGQGKLYGYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKKDYSNTLNIMLTN
Ga0207890_100986443300025079MarineMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLNVMLTKHS
Ga0209535_104575143300025120MarineVTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNVMLTN
Ga0209535_105519713300025120MarineMWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNVMLTN
Ga0209535_115057333300025120MarineMTWIIVQQCKDCSGQGKLYGYNTTPDTCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLNIMLTN
Ga0209535_118730523300025120MarineMTWIIVQQCEDCSGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYDTVDDVKEDYANTLNVMLTN
Ga0209634_110054133300025138MarineMTWFIVQECKDCSGQGKLYGYNTIPDTCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTK
Ga0209634_125618813300025138MarineCSGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYKTIDEVKKDYSNTLNVMLTN
Ga0209337_118836243300025168MarineDMTWIIVQQCKDCSGQGKLYGYNTTPDTCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLNIMLTN
Ga0208031_101477133300025237Deep OceanMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNVMLTN
Ga0208031_101526023300025237Deep OceanMTWVIVQECKDCSGRGKLYSYNTIPNKCHECEGTGKKEYHEKTYQYKTVDEVKEDYSNTLTVLLTN
Ga0208814_106967933300025276Deep OceanMTWVIVQQCKDCSGQGKLYGYNTTPDTCHECEGTGEKEYYEENYQYDTVDEVKEDYSNTLNIMLTN
Ga0207903_107002233300025287Deep OceanQECKDCSGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYKTIDEVKKDYSNTLNVMLTN
Ga0208134_108231513300025652AqueousMTWIIVQECKDCGGQGKLYGYNTTPDTCHECEGTGEKEWYEENYQYDTVDEVKEDYANTLNIMLTN
Ga0208645_112390853300025853AqueousMTWIIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYAN
Ga0209308_1012596043300025869Pelagic MarineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDFSNTLTIMLTKH
Ga0209631_1000515973300025890Pelagic MarineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDFSNTLTIMLTKHS
Ga0209384_102441553300027522MarineMTWVIVQQCVDCGGQGELYSYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKEDYANTL
Ga0209384_110404033300027522MarineCLVGGNGMTWVIVQECKDCSGRGKLYSYNTIPNKCHECEGTGKKEYHEKTYQYKTVDEVKEDYSNTLTVLLTN
Ga0209482_103637043300027668MarineMTWVIVQQCVDCGGQGELYSYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKKDYSNTLNVMLTN
Ga0209071_113732113300027686MarineMTWVIVQQCVDCSGQGKLYGYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKEDYANTLNVMLTN
Ga0209710_126460223300027687MarineMTWVIVQECKDCSGQGKLYKYNTTPNKCHECEGTGEREWYEETYHYETKEGVKKDYSNTSSITLT
Ga0209815_107009053300027714MarineMTWVIVQQCVDCGGQGELYSYNTTPNKCHECEGTGEKEYYEENYQYKTIDEVKEDYANTLNVMLTN
Ga0209711_1034705923300027788MarineMTWVIVQECKDCSGQGKLYKYNTTPNKCYECEGTGEKEWYEENYQYKTVDEVKEDYSNTLTVMLTN
Ga0209089_1015435123300027838MarineMTWFIVQECKDCSGQGKLYGYNTKPDTCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTN
Ga0209403_1002546363300027839MarineMTWFIVQECKDCSGQGKLYGYNTTPDKCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTN
(restricted) Ga0255055_1040110013300027881SeawaterMWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANPLTVMLTN
Ga0256368_101552533300028125Sea-Ice BrineMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN
Ga0183757_1000072333300029787MarineMTWIIVQQCEDCNGQGELYGYNTIPYKCHECEGTGEKEYYEKNYHYDTIDEVTKDYSNTLSITLV
Ga0302134_1026964913300031596MarineQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN
Ga0302132_1017504753300031605MarineMTWFIVQECKDCSGQGKLYGYNTTPDTCYECEGTGEREYYEASHHYETKAEVKEDYLNTICIMLTK
Ga0302126_1028666733300031622MarineDMTWVIVQECKDCSGQGKLYKYNTTPNKCYECEGTGEKEWYEENYQYKTVDEVKEDYSNTLTVMLTN
Ga0302123_1043465613300031623MarineMTWFIVQECKDCSGQGKLYGYNTTPDKCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTK
Ga0302118_1021786743300031627MarineMGGNGMTWVIVQQCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYSNPLTVILTN
Ga0302125_1017904623300031638MarineMTWVIVQECKDCSGRGKLYSYNTTPNKCHECEGTGEREWYEETYHYETKEGVKKDYSNTSSITLT
Ga0314858_158562_254_4603300033742Sea-Ice BrineMTWVIVQECEDCSGQGKLYGYNTTPNKCHECEGTGEKEYYEENYQYDTVDEVKEDFSNTLTVMLTKHS
Ga0314858_197349_14_2293300033742Sea-Ice BrineMGVNGMTWFIVQECKDCSGQGKLYGYNTIPDTCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTK
Ga0348336_019575_1265_14803300034375AqueousMGVNGMTWVIVQQCKDCGGQGKLYGYNTTPNKCHECEGTGEKEWYEENYQYKTIDEVKEDYANTLNIMLTN
Ga0348336_103541_738_9383300034375AqueousMTWVIVQKCVDCGGHGELYSYYTTPNKCHECEGTGEKEYYEENYQYDTVDDVKEDYANTLNIMLTN
Ga0326741_062394_405_6023300034654Filtered SeawaterMWFIVQECKDCSGQGKLYGYNTIPDTCYECEGTGEREYYEASHHYETKAEVKEDYLNAICIMLTK


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