Metagenome / Metatranscriptome Family F089321

Basic Information
Family ID	F089321
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	38 residues
Representative Sequence	MRLFIALDIDDVIRERIARFVEGVRNFAPDARWVKPE
Number of Associated Samples	101
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.93 %
% of genes near scaffold ends (potentially truncated)	96.33 %
% of genes from short scaffolds (< 2000 bps)	89.91 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (97.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (7.339 % of family members)
Environment Ontology (ENVO)	Unclassified (18.349 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.459 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.15% β-sheet: 0.00% Coil/Unstructured: 73.85%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02464	CinA	87.16
PF02163	Peptidase_M50	0.92
PF13662	Toprim_4	0.92
PF13458	Peripla_BP_6	0.92
PF13563	2_5_RNA_ligase2	0.92
PF03631	Virul_fac_BrkB	0.92
PF02834	LigT_PEase	0.92
PF00682	HMGL-like	0.92
PF02954	HTH_8	0.92
PF08450	SGL	0.92
PF03884	YacG	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	87.16
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.92
COG1514	RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase)	Translation, ribosomal structure and biogenesis [J]	0.92
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.92
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.92
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.94 %
Unclassified	root	N/A	2.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.51 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.75 %
Unclassified	root	N/A	2.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	16.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Unclassified	root	N/A	2.75 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Unclassified	root	N/A	2.75 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	11.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Unclassified	root	N/A	2.75 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Unclassified	root	N/A	2.75 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	1.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Unclassified	root	N/A	2.75 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005158\|Ga0066816_1015621	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005184\|Ga0066671_10199395	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300005435\|Ga0070714_102017778	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005436\|Ga0070713_102174494	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300005518\|Ga0070699_100633098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	976	Open in IMG/M
3300005530\|Ga0070679_100347581	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300005540\|Ga0066697_10425276	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300005555\|Ga0066692_10976972	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005557\|Ga0066704_10149347	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300005569\|Ga0066705_10077860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1929	Open in IMG/M
3300005764\|Ga0066903_102887146	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005892\|Ga0075275_1042156	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005895\|Ga0075277_1094336	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005903\|Ga0075279_10028423	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005994\|Ga0066789_10047719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1879	Open in IMG/M
3300006086\|Ga0075019_10950607	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006173\|Ga0070716_101163474	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006354\|Ga0075021_10202210	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300009137\|Ga0066709_104016236	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009522\|Ga0116218_1573182	Not Available	500	Open in IMG/M
3300009545\|Ga0105237_10097742	All Organisms → cellular organisms → Bacteria → Acidobacteria	2927	Open in IMG/M
3300009639\|Ga0116122_1035162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1735	Open in IMG/M
3300009698\|Ga0116216_10367942	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300009792\|Ga0126374_10790255	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300009839\|Ga0116223_10268217	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300010048\|Ga0126373_10270697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1681	Open in IMG/M
3300010048\|Ga0126373_10810136	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300010358\|Ga0126370_11070278	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300010360\|Ga0126372_11066817	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300010366\|Ga0126379_13684612	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010398\|Ga0126383_12741095	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300011271\|Ga0137393_11421753	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012361\|Ga0137360_11196640	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012977\|Ga0134087_10269063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300012989\|Ga0164305_11812368	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300014165\|Ga0181523_10069789	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2144	Open in IMG/M
3300016422\|Ga0182039_11874176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	550	Open in IMG/M
3300016445\|Ga0182038_11836674	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300016750\|Ga0181505_10237776	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300017823\|Ga0187818_10046151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1871	Open in IMG/M
3300017961\|Ga0187778_10937017	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300017966\|Ga0187776_10541990	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300017973\|Ga0187780_10281669	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300017994\|Ga0187822_10263171	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300017995\|Ga0187816_10040059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1931	Open in IMG/M
3300017995\|Ga0187816_10233633	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300018012\|Ga0187810_10178432	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300018032\|Ga0187788_10313806	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300018034\|Ga0187863_10008233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6987	Open in IMG/M
3300018058\|Ga0187766_10049893	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2458	Open in IMG/M
3300018064\|Ga0187773_10618032	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300018090\|Ga0187770_10553388	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300018433\|Ga0066667_11009738	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300020583\|Ga0210401_10122523	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2438	Open in IMG/M
3300020583\|Ga0210401_10295871	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300021168\|Ga0210406_10437694	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300021402\|Ga0210385_11466370	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300021560\|Ga0126371_13180905	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300022722\|Ga0242657_1237910	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300024227\|Ga0228598_1018615	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300025795\|Ga0210114_1099139	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300025899\|Ga0207642_10377017	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300025907\|Ga0207645_10948286	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300026078\|Ga0207702_11968140	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300026089\|Ga0207648_11001799	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300026313\|Ga0209761_1074345	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300026529\|Ga0209806_1136127	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300026530\|Ga0209807_1337748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300026536\|Ga0209058_1211480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300027684\|Ga0209626_1167922	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300027803\|Ga0209910_10032840	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300027842\|Ga0209580_10091275	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300027867\|Ga0209167_10665348	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300027894\|Ga0209068_10189172	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300027894\|Ga0209068_10745149	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300027895\|Ga0209624_10806410	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300027898\|Ga0209067_10171000	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300028566\|Ga0302147_10057372	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300028746\|Ga0302233_10266317	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300028747\|Ga0302219_10017380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2682	Open in IMG/M
3300028779\|Ga0302266_10258936	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300028906\|Ga0308309_10641849	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300029907\|Ga0311329_11025365	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300029956\|Ga0302150_10358964	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300030007\|Ga0311338_10202530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2287	Open in IMG/M
3300030042\|Ga0302300_1108745	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300030047\|Ga0302286_10556310	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300030503\|Ga0311370_10350472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1882	Open in IMG/M
3300031681\|Ga0318572_10938393	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031718\|Ga0307474_11111263	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031754\|Ga0307475_10994453	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031771\|Ga0318546_10126765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1701	Open in IMG/M
3300031823\|Ga0307478_11548366	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031833\|Ga0310917_10371023	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300031852\|Ga0307410_11328374	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031852\|Ga0307410_11370768	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031954\|Ga0306926_10767071	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300032174\|Ga0307470_10227393	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300032180\|Ga0307471_100613818	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300032180\|Ga0307471_102121605	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300032515\|Ga0348332_10841088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5442	Open in IMG/M
3300032770\|Ga0335085_10107641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3587	Open in IMG/M
3300032783\|Ga0335079_11053814	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300032783\|Ga0335079_11730788	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300032783\|Ga0335079_11847007	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300032805\|Ga0335078_10926291	Not Available	1043	Open in IMG/M
3300032954\|Ga0335083_10311177	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300033402\|Ga0326728_10093588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3702	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.66%
Host-Associated	Host-Associated	7.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.90%
Aquatic	Environmental → Aquatic	13.76%
Plants	Host-Associated → Plants	7.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.89%
Peat	Environmental → Terrestrial → Peat	10.09%
Freshwater	Environmental → Aquatic → Freshwater	8.26%
Sediment	Environmental → Aquatic → Sediment	4.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.75%
Marine	Environmental → Aquatic → Marine	0.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.75%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.59%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005892	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_305	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300005903	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027803	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712S3S	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066816_10156211	3300005158	Soil	MRLFIALDIDDQIRQRIGRFLEGVSGFSPDARWVPLESLHITL
Ga0066671_101993952	3300005184	Soil	MRLFVALDIADEIRQRIARFMEGVREFAPEPGWVREESLH
Ga0070714_1020177781	3300005435	Agricultural Soil	MRLFVALDIDERIARFMEGVRNFASDAGWAKEESLHVTLKF
Ga0070713_1021744941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFVALDIDDPIRERIARFVVGLRNFAPDARWAKRNRCT*
Ga0070699_1006330982	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LTMRIFIAVDIDDVIRERLRLFMEGVRGFAVDARWVRSE*
Ga0070679_1003475812	3300005530	Corn Rhizosphere	MRLFVALDIDDPIRERIARFVEGVRNFAPDGRWAKEESLHV
Ga0066697_104252761	3300005540	Soil	MRIFVALDLDDDIRQRIQTFMDGVQNFSPDARWVNAASLHVT
Ga0066692_109769722	3300005555	Soil	MRIFIALDIDDAIRERIARFVEGVSSFAPDARWAKPE
Ga0066704_101493472	3300005557	Soil	MRLFVALDIADEIRQRIARFMEGVREFAPEPRWVREESLHV
Ga0066705_100778601	3300005569	Soil	MRVFVALDVDNAIREQLQLFMDGVSGFAPDARWIRPESMHVTL
Ga0066903_1028871461	3300005764	Tropical Forest Soil	MRLFVALDIDQSIRERIVRFVDGLHNFAPDARWMKPESMHV
Ga0075275_10421561	3300005892	Rice Paddy Soil	MRLFVAFDIDPDIRERLARFLDGVREFAPDARWVRAESL
Ga0075277_10943361	3300005895	Rice Paddy Soil	MRLFVALDIADEVRERIGRYVEGVQNFAPEARWVKE
Ga0075279_100284232	3300005903	Rice Paddy Soil	MRLFIALDIDDAIRERLAKFVEGVRGFAPDVRFVGVESLHIT
Ga0066789_100477191	3300005994	Soil	MRLFIALDIDDAIRDRITRFVEGVTGFAPDARWAKPE
Ga0075019_109506071	3300006086	Watersheds	MRLFLALDIDEAIRQRIERFLEGVHPFAPDARWAKPE
Ga0070716_1011634742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFIALEIDGAIRERVARFIEGVGPFAPDARWVTSESLHI
Ga0075021_102022101	3300006354	Watersheds	MRLFIALDIDGAIRERIVRFVDGVREFAPDARWVPP
Ga0066709_1040162362	3300009137	Grasslands Soil	MRIFIALDIDDSIRERIKRFMEGVRGFDPEARWVRH
Ga0116218_15731821	3300009522	Peatlands Soil	MRLFIALDIADAVRERLARFTEGVQAFAPDARWAK
Ga0105237_100977423	3300009545	Corn Rhizosphere	MRLFVALDIEETIRERIASFVKEVCPLAPGVRWVASEPCT*
Ga0116122_10351621	3300009639	Peatland	MRLFIALDIDDAIRERIARFIEGVQGFAPEARWVKP
Ga0116216_103679422	3300009698	Peatlands Soil	MRLFIALDIDDAIRERIARFVEGVSGFAPDARWAKPE
Ga0126374_107902552	3300009792	Tropical Forest Soil	MAAFMRLFIALDIDDGIRERISRFVESVRSFSPDARW
Ga0116223_102682172	3300009839	Peatlands Soil	MRLFIAVDIDDAIRERIARFIEGVQGFAPDARWVK
Ga0126373_102706971	3300010048	Tropical Forest Soil	MRLFIALEIDEAIRQRIARFTEGVRGFAPDARWVKEESLH
Ga0126373_108101362	3300010048	Tropical Forest Soil	MRIFIGLDLENSIRERIRRFMDGVRGFAPDARWTRPESL
Ga0126370_110702782	3300010358	Tropical Forest Soil	MRIFVALDIDEDIRRRIVGFVDDLRPYARDARWVKPES
Ga0126372_110668172	3300010360	Tropical Forest Soil	MRLFVALDIDDLIRERIARFVEGVCNFAPEARWVKPESLH
Ga0126379_136846121	3300010366	Tropical Forest Soil	MRIFIALDLDDAIRERIDRFIEGVRGFAPGARWVLPES
Ga0126383_127410952	3300010398	Tropical Forest Soil	MRVFIALDIDQSIRERITRFLDGVREFAPDARWVRTE
Ga0137393_114217532	3300011271	Vadose Zone Soil	MRIFIALDIDDAIRDRISRFMDGVREFAPDARWVRP
Ga0137360_111966402	3300012361	Vadose Zone Soil	MRLFIALDIDDPIRERITRFADEVRNFSPDARWVKL
Ga0134087_102690632	3300012977	Grasslands Soil	MRIFVALDLDDGIRQRIQRFMDGVQNFAPDARWVNAAS
Ga0164305_118123681	3300012989	Soil	LLNVRLFIALDIDEEIRQRIGRFLDGVSGFAADARWV
Ga0181523_100697891	3300014165	Bog	MRLFVALDIDGAIRGRIAQFMDGMRGFAPDARWVSAES
Ga0182039_118741762	3300016422	Soil	MRLFVALDIDDAIRERIVRFVEVVHPFAPDARWVKPESMHVTL
Ga0182038_118366742	3300016445	Soil	MRLFLALDIDDAIRDRLTRFLEGVRNFAPDARWVKPESL
Ga0181505_102377761	3300016750	Peatland	MRLFIALDIDDAIRERIARFLEGVSGFVPDARWAKPES
Ga0187818_100461513	3300017823	Freshwater Sediment	MRLFVALDIDSAIRAKIAQFMEGVREFAPDARRISAESL
Ga0187778_109370172	3300017961	Tropical Peatland	MRLFIALDIDDAIRECIARFVEGVQGFAPDARWVKPES
Ga0187776_105419901	3300017966	Tropical Peatland	MRLFVALEIDPEIRARIAQFMDGVREFAPDARWVSAES
Ga0187780_102816691	3300017973	Tropical Peatland	MRLFVALDIDAEIRARIAQFMDGVCAFAPDARWVSAESLHLTLK
Ga0187822_102631711	3300017994	Freshwater Sediment	MRLFIALDIDDVIRERIARFVEGVRNFAPDARWVKPE
Ga0187816_100400591	3300017995	Freshwater Sediment	MRLFIALDLDPSIRHRIAQFMDGVRGFAPDARWVSAE
Ga0187816_102336331	3300017995	Freshwater Sediment	MRLFVALDIDDGIRERITRFVDGVRNFAPDARWMKPESL
Ga0187810_101784322	3300018012	Freshwater Sediment	MRLFIALDLDDAIRERIARFVEGVSNFAPDARWVKPESLH
Ga0187788_103138062	3300018032	Tropical Peatland	MRLFLALDIDPEIRSRIAEFMDGVRGFAPDARWVS
Ga0187863_100082338	3300018034	Peatland	MRLFLALDIDDAIRERITRFVDGVRNFSPDARWMQPE
Ga0187766_100498931	3300018058	Tropical Peatland	MRLFVALDLHEEIRQRIARFVEGVGEFAPQPRWVSPQSLH
Ga0187773_106180321	3300018064	Tropical Peatland	MRLFVALDIDPPIRRRIAQFMDGVREFAPDARWVSAESL
Ga0187770_105533881	3300018090	Tropical Peatland	MRIFIALDIDDAIRERIARFMDGVREFAPDARWVKPE
Ga0066667_110097381	3300018433	Grasslands Soil	MFAMRLFVALDIDEAIRERITRFLDAVEDLAPDARW
Ga0210401_101225233	3300020583	Soil	MRLFVAFDIDDNIRDRIVRFLDGVRGFAPDARWARPESL
Ga0210401_102958711	3300020583	Soil	MRLFIALDIDDAIRGRIARFVEGVSGFALDARWAKPESMHV
Ga0210406_104376942	3300021168	Soil	MRLFIALDIDDGIRAQIAQFIEAVQAFAPEARWMKPESLLV
Ga0210385_114663702	3300021402	Soil	MRLFIALDIDEAVRERIARFVEGVTGFAADARWMRPE
Ga0126371_131809052	3300021560	Tropical Forest Soil	MRLFIALDIDHSIRERIARFMEGVRNFAPDARWMKEE
Ga0242657_12379101	3300022722	Soil	MRIFVALDIDAAIRQRIQRFMEGVSGFAPDARWVR
Ga0228598_10186151	3300024227	Rhizosphere	MRLFIALDIDDEIRERIARFAEGVSGFAPDARWARPDSL
Ga0210114_10991392	3300025795	Natural And Restored Wetlands	MRLFVGIDIEPAIRERISKFVEGVRNFAPDVRWVNAETFH
Ga0207642_103770171	3300025899	Miscanthus Rhizosphere	MRLFVALDIDDAIRERIALFQDGVGGFAPDAKWVRAESLHITL
Ga0207645_109482861	3300025907	Miscanthus Rhizosphere	MRLFVALDLADPIRERIQQFMEGVRGFAPDVRWVTPESL
Ga0207702_119681401	3300026078	Corn Rhizosphere	MRLFIALDIDEEIRRRIERFVEGVRGFAPDVRFVGPQSFHVTLK
Ga0207648_110017991	3300026089	Miscanthus Rhizosphere	MRIFVALDIDDAIRSRIQRFMEGVQEFAPDVRWVRP
Ga0209761_10743453	3300026313	Grasslands Soil	MRIFIALDIDDSIRERIKRFMEGVRGFDPEARWVRHESLHIT
Ga0209806_11361272	3300026529	Soil	MRIFIALDVEDSIRQRIARFMEGVRGFAPDVRWVR
Ga0209807_13377481	3300026530	Soil	MRVFVALDVDNAIREQLQLFMDGVSGFAPDARWIRP
Ga0209058_12114801	3300026536	Soil	MRIFVALDLDDGIRQRIQRFMDGVQNFAPDARWVNA
Ga0209626_11679221	3300027684	Forest Soil	MRLFVALDVDDAIRGRIAGFMDGVRGFAPDARWLE
Ga0209910_100328402	3300027803	Thawing Permafrost	MRLFVALDIDDAIRSRIARFLDGVREFAPDARWARPESL
Ga0209580_100912752	3300027842	Surface Soil	MRLFIALDIDDAIRERLTGFLEGVHNFAPDARWVKPESL
Ga0209167_106653481	3300027867	Surface Soil	MRIFVALDIDDAIRQRILRFMEGVSGFAPDARWVRL
Ga0209068_101891722	3300027894	Watersheds	MRLFIALDIDGAIRERIVRFVDGVREFAPDARWVPPE
Ga0209068_107451491	3300027894	Watersheds	MRIFVALHIDEAIRERIQRFMDGVRGFAADAHWARPE
Ga0209624_108064102	3300027895	Forest Soil	MRLFVALDINDDIRNRIARYLEGVRGFAPAVRWMRS
Ga0209067_101710002	3300027898	Watersheds	MRLFLALDIDDAIRARISRFVEGVRNFAPDARWAKEE
Ga0302147_100573722	3300028566	Bog	MRLFVALDIDDAIRSRIARFLDGVREFAPDARWAR
Ga0302233_102663172	3300028746	Palsa	MRLFIALDITDAIRGRIARFVEGVTGFAPDARGAK
Ga0302219_100173803	3300028747	Palsa	MRLFVALDIDDVIRSRIARFLDGVREFAPDARWARSESL
Ga0302266_102589361	3300028779	Bog	MRLFVALDIDEAIRVRIARFLDGVRGFAPEARWVRIE
Ga0308309_106418491	3300028906	Soil	MRLFVALDIDDGIRSRIARFLDGVRGFAPDVRWARPEAL
Ga0311329_110253651	3300029907	Bog	MRLFIALDLDNEIRNRIARFLDGVCEFASDARWARP
Ga0302150_103589641	3300029956	Bog	MRLFVALDIDDDIRGSIARFIDEFRDVAAQARWVKPESLH
Ga0311338_102025303	3300030007	Palsa	MRLFVALDLDDNLRSRIVRFVEGVRGFAPEARWARPESL
Ga0302300_11087452	3300030042	Palsa	MRLFVALDIDDVIRSRIARFLDGVREFAPDARWAR
Ga0302286_105563102	3300030047	Fen	MRIFVALDIEDIISQRIARFMDGVREFAPDARWVR
Ga0311370_103504723	3300030503	Palsa	MRLFIAVDLDDAIRERISLFMEGVRPFAPDARWLKPESL
Ga0318572_109383932	3300031681	Soil	MRLFIALDIDDAIRERITRFVEGVRSFAPDGRWVKPES
Ga0307474_111112632	3300031718	Hardwood Forest Soil	MRVFVALDVDDAIRSRIARFLDGVRGFAPDARWVKPES
Ga0307475_109944532	3300031754	Hardwood Forest Soil	VRLFIALDIDDAIRERMTGFMDGLRGFAPDVRWVRTE
Ga0318546_101267651	3300031771	Soil	MRIFIALDLDDPIRERIDHFIEGVRGFAPDARWVLPESLHI
Ga0307478_115483661	3300031823	Hardwood Forest Soil	MRLFIALDIDEAVRERIARFVEGVSGFAADARWMRPES
Ga0310917_103710231	3300031833	Soil	MRIFIALDLDDPIRERIDHFIEGVRGFAPDARWVLPESLH
Ga0307410_113283742	3300031852	Rhizosphere	MRLFVGIDIEPAIRERISKFVDGVRNFAPDVRWVNPETFHV
Ga0307410_113707682	3300031852	Rhizosphere	MRLFVGIDIEPAIRERISKFVEGVRNFAPDVRWVNVET
Ga0306926_107670711	3300031954	Soil	MRLFLALDIDDAIRDRLTRFLEGVRNFAPDARWVKPE
Ga0307470_102273932	3300032174	Hardwood Forest Soil	MRLFVALDIDDSIRSRITRFLDGLRGFAPDARWVRSES
Ga0307471_1006138181	3300032180	Hardwood Forest Soil	MRIFVALDIDDAIRNRIQRFMDGVRGFAPDARWVR
Ga0307471_1021216051	3300032180	Hardwood Forest Soil	MRIFIALDIEDVVRDRIRRFMDGVREFAPDARWVR
Ga0348332_108410887	3300032515	Plant Litter	MRLFIALDIDDEIRERIARFAEGVSGFAPDARWARPDS
Ga0335085_101076411	3300032770	Soil	MRLFVALDIDNAIRERIVRFVEGVNPFAPEARWLKPESMHVT
Ga0335079_110538141	3300032783	Soil	MRLFIALDIVDAIRGRIGRFLEGVRNFAPDARWVRDESLHV
Ga0335079_117307882	3300032783	Soil	MRLFLALDIDGAIRERIARFMDGVRGFAPDARWIQPESLH
Ga0335079_118470072	3300032783	Soil	MRLFIALDIDDAIRERIVRFLDGVQGFAPDARWVK
Ga0335078_109262911	3300032805	Soil	MARLPMRLFVALDIDPEIRNRIAQFMDGVRGFAPEARWVSVESLHLT
Ga0335075_105629482	3300032896	Soil	MRLFVALDLDESVREKIARFMDGVCGLAPEARWIQPESLH
Ga0335083_103111771	3300032954	Soil	MRLFVALDIPSEIRERITRFVEGLVRFSPDANWVKPA
Ga0326728_100935885	3300033402	Peat Soil	MRLFVALDIDFAVRERIAGFMAEVQKLAPEARWVKPESFHIT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089321

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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