Metagenome Family F089290

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089290
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	98 residues
Representative Sequence	VDDYYSGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Number of Associated Samples	81
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.15 %
% of genes near scaffold ends (potentially truncated)	29.36 %
% of genes from short scaffolds (< 2000 bps)	70.64 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.239 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (44.954 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.541 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.29% β-sheet: 0.00% Coil/Unstructured: 52.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00239	Resolvase	66.97
PF02586	SRAP	1.83
PF13589	HATPase_c_3	0.92
PF01925	TauE	0.92
PF04014	MazE_antitoxin	0.92
PF13384	HTH_23	0.92
PF11074	DUF2779	0.92
PF14236	DUF4338	0.92
PF13538	UvrD_C_2	0.92
PF12728	HTH_17	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	66.97
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	66.97
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	1.83
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.24 %
Unclassified	root	N/A	13.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.24 %
Unclassified	root	N/A	13.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.24 %
Unclassified	root	N/A	13.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.23 %
Unclassified	root	N/A	13.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.19 %
Unclassified	root	N/A	13.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.19 %
Unclassified	root	N/A	13.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.83 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.19 %
Unclassified	root	N/A	13.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.83 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.92 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.19 %
Unclassified	root	N/A	13.76 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	0.92 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.92 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.19 %
Unclassified	root	N/A	13.76 %
Candidatus Electrothrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electrothrix	0.92 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.92 %
unclassified Edaphobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.19 %
Unclassified	root	N/A	13.76 %
Candidatus Electrothrix aarhusiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electrothrix → Candidatus Electrothrix aarhusiensis	0.92 %
Edaphobacter sp. 4G125	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter → Edaphobacter sp. 4G125	0.92 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10029202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3257	Open in IMG/M
3300000567\|JGI12270J11330_10162092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300004080\|Ga0062385_11184140	Not Available	522	Open in IMG/M
3300004082\|Ga0062384_100062531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1854	Open in IMG/M
3300004152\|Ga0062386_101654149	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300005994\|Ga0066789_10128810	All Organisms → cellular organisms → Bacteria → Acidobacteria	1079	Open in IMG/M
3300006059\|Ga0075017_101331610	Not Available	564	Open in IMG/M
3300006162\|Ga0075030_100145665	All Organisms → cellular organisms → Bacteria → Acidobacteria	1918	Open in IMG/M
3300006162\|Ga0075030_100216805	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300006174\|Ga0075014_100720888	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300009520\|Ga0116214_1158366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300009521\|Ga0116222_1238432	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300009522\|Ga0116218_1023474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2749	Open in IMG/M
3300009522\|Ga0116218_1180553	Not Available	956	Open in IMG/M
3300009523\|Ga0116221_1095413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1319	Open in IMG/M
3300009623\|Ga0116133_1019061	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300009630\|Ga0116114_1123124	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300009632\|Ga0116102_1035041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300009638\|Ga0116113_1014874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1681	Open in IMG/M
3300009698\|Ga0116216_10180820	All Organisms → cellular organisms → Bacteria → Acidobacteria	1295	Open in IMG/M
3300009759\|Ga0116101_1067074	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300009839\|Ga0116223_10386474	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300010339\|Ga0074046_10056402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2593	Open in IMG/M
3300010339\|Ga0074046_10311518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300010341\|Ga0074045_10677636	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300010341\|Ga0074045_10882047	Not Available	565	Open in IMG/M
3300010341\|Ga0074045_11057799	Not Available	508	Open in IMG/M
3300010343\|Ga0074044_10010312	All Organisms → cellular organisms → Bacteria → Acidobacteria	7145	Open in IMG/M
3300010343\|Ga0074044_10320109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300010343\|Ga0074044_10566318	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300010343\|Ga0074044_10942691	Not Available	565	Open in IMG/M
3300010343\|Ga0074044_11010724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300010379\|Ga0136449_100152646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4526	Open in IMG/M
3300010379\|Ga0136449_100395081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2458	Open in IMG/M
3300010379\|Ga0136449_100403069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2426	Open in IMG/M
3300014155\|Ga0181524_10092835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1711	Open in IMG/M
3300014199\|Ga0181535_10617496	All Organisms → cellular organisms → Bacteria → Acidobacteria	621	Open in IMG/M
3300014200\|Ga0181526_10037293	All Organisms → cellular organisms → Bacteria	3127	Open in IMG/M
3300014491\|Ga0182014_10047335	All Organisms → cellular organisms → Bacteria → Acidobacteria	3008	Open in IMG/M
3300014495\|Ga0182015_10138623	All Organisms → cellular organisms → Bacteria → Acidobacteria	1661	Open in IMG/M
3300014501\|Ga0182024_10155983	All Organisms → cellular organisms → Bacteria → Acidobacteria	3198	Open in IMG/M
3300014638\|Ga0181536_10348256	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300017822\|Ga0187802_10166207	Not Available	845	Open in IMG/M
3300017823\|Ga0187818_10267046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300017823\|Ga0187818_10270095	Not Available	745	Open in IMG/M
3300017925\|Ga0187856_1125698	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300017933\|Ga0187801_10025239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2052	Open in IMG/M
3300017940\|Ga0187853_10403992	Not Available	604	Open in IMG/M
3300017940\|Ga0187853_10419514	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300017943\|Ga0187819_10169334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300017943\|Ga0187819_10369477	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300017943\|Ga0187819_10422491	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300017946\|Ga0187879_10004421	All Organisms → cellular organisms → Bacteria	9398	Open in IMG/M
3300017955\|Ga0187817_10500978	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300017955\|Ga0187817_10655810	Not Available	669	Open in IMG/M
3300017955\|Ga0187817_11079077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300017988\|Ga0181520_10015153	All Organisms → cellular organisms → Bacteria	9445	Open in IMG/M
3300018006\|Ga0187804_10010176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3207	Open in IMG/M
3300018007\|Ga0187805_10195974	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300018014\|Ga0187860_1330120	Not Available	584	Open in IMG/M
3300018016\|Ga0187880_1373313	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300018017\|Ga0187872_10010847	All Organisms → cellular organisms → Bacteria	5704	Open in IMG/M
3300018020\|Ga0187861_10276054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300018022\|Ga0187864_10014786	All Organisms → cellular organisms → Bacteria	5037	Open in IMG/M
3300018026\|Ga0187857_10213053	All Organisms → cellular organisms → Bacteria → Acidobacteria	898	Open in IMG/M
3300018030\|Ga0187869_10416320	Not Available	640	Open in IMG/M
3300018035\|Ga0187875_10073101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1972	Open in IMG/M
3300018040\|Ga0187862_10028817	All Organisms → cellular organisms → Bacteria → Acidobacteria	4223	Open in IMG/M
3300018040\|Ga0187862_10371536	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300018042\|Ga0187871_10488815	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300018090\|Ga0187770_10747246	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300025412\|Ga0208194_1013240	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300025453\|Ga0208455_1027129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300025473\|Ga0208190_1044188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300026291\|Ga0209890_10007761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4466	Open in IMG/M
3300027570\|Ga0208043_1189418	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300027604\|Ga0208324_1093642	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300027604\|Ga0208324_1217612	Not Available	502	Open in IMG/M
3300027676\|Ga0209333_1083253	Not Available	875	Open in IMG/M
3300027698\|Ga0209446_1007065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2750	Open in IMG/M
3300027737\|Ga0209038_10043578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1340	Open in IMG/M
3300027812\|Ga0209656_10384500	Not Available	632	Open in IMG/M
3300027829\|Ga0209773_10369777	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300027854\|Ga0209517_10005194	All Organisms → cellular organisms → Bacteria → Acidobacteria	16685	Open in IMG/M
3300027854\|Ga0209517_10448167	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300027905\|Ga0209415_10000094	All Organisms → cellular organisms → Bacteria → Acidobacteria	128781	Open in IMG/M
3300027905\|Ga0209415_10252150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1585	Open in IMG/M
3300027905\|Ga0209415_10600346	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300027911\|Ga0209698_10004617	All Organisms → cellular organisms → Bacteria → Acidobacteria	15033	Open in IMG/M
3300027911\|Ga0209698_10836302	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300028552\|Ga0302149_1217653	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300028731\|Ga0302301_1000083	All Organisms → cellular organisms → Bacteria	92767	Open in IMG/M
3300028808\|Ga0302228_10043562	All Organisms → cellular organisms → Bacteria → Acidobacteria	2187	Open in IMG/M
3300028877\|Ga0302235_10247358	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300029907\|Ga0311329_10623766	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300029953\|Ga0311343_10494068	All Organisms → cellular organisms → Bacteria → Acidobacteria	1089	Open in IMG/M
3300030041\|Ga0302274_10497252	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300030509\|Ga0302183_10020293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Candidatus Electrothrix → Candidatus Electrothrix aarhusiensis	2734	Open in IMG/M
3300031261\|Ga0302140_10307914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300031524\|Ga0302320_10181114	All Organisms → cellular organisms → Bacteria → Acidobacteria	3077	Open in IMG/M
3300031525\|Ga0302326_10831359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300031708\|Ga0310686_105573766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1338	Open in IMG/M
3300031708\|Ga0310686_106809103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter → Edaphobacter sp. 4G125	12525	Open in IMG/M
3300032160\|Ga0311301_10176958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3744	Open in IMG/M
3300032160\|Ga0311301_10313669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2496	Open in IMG/M
3300032160\|Ga0311301_10351885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2303	Open in IMG/M
3300033402\|Ga0326728_10016182	All Organisms → cellular organisms → Bacteria	15287	Open in IMG/M
3300033402\|Ga0326728_10271936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1584	Open in IMG/M
3300033828\|Ga0334850_002531	All Organisms → cellular organisms → Bacteria	5013	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.38%
Aquatic	Environmental → Aquatic	48.62%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.12%
Soil	Environmental → Terrestrial → Soil	38.53%
Peat	Environmental → Terrestrial → Peat	12.84%
Sediment	Environmental → Aquatic → Sediment	5.50%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	43.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.50%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	24.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	11.01%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.09%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	21.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	11.01%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	9.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100292022	3300000567	Peatlands Soil	MHDHCSAETMSIEGLIGLQRTLSLSRNPFERVIGTLCVAGILKARLTVLPDEAVGQLMVDHVTDLNLLGPECVIVEVASERLLNTSSVLVKTTKENIHP*
JGI12270J11330_101620921	3300000567	Peatlands Soil	MHDYYSRLSVEGLIEEQRRLSASKNPFERVVGALCVAGLLKKRLASFTDRAVGQLMSDFVWSELNLLGPESVIVEIASERLLHSSP
Ga0062385_111841401	3300004080	Bog Forest Soil	MHDSGQEISVEDLIVEQRRLSASKNPFDRVVGTLCLAGLLRQRLAALTDAAVGQLMFNHVCNEMNVFSPELTICEVATERLLHPTPVLVKSAKERLTR*
Ga0062384_1000625311	3300004082	Bog Forest Soil	MTDYYSQEETISVEGLIDEQRRLARAEDRFERVVGSLVASGLLKQRLVALTDVAVGQLMSDYVCDEMNIFGPELTICQEATERLLYSSPVLVKSDKENLKS*
Ga0062386_1016541491	3300004152	Bog Forest Soil	PDYYSGEEEISVEGLIEEQRRLSASKNPFERVVGTLCVSGILKARLAILPDEAVGQLMFDHVWSELNLLGPESVIVELASERLLHSSPLPAKNTKENLNQ*
Ga0066789_101288102	3300005994	Soil	VHAHYSGDEKISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKEKLAALTDAAVGQLMIDHVWSELNLLGPESVIVEVASERLFHPSPVLVKSVKENINR*
Ga0075017_1013316101	3300006059	Watersheds	MHDSGQEISVEDLIVEQRRLSASKNPFDRVVGTLCLAGLLRQRLAALTDVAVGQLMFNHVCNELNVFSPELTICEVVTERLLRPNPVLVKCAKERLTR*
Ga0075030_1001456651	3300006162	Watersheds	YSGVSVEGLIEEQRRLSVSKNPFERVVGALCVAGLLKERLAAFTDAAVGQLMFDCVWSELNLLGPESVIVELASERLLHSSPMPVKNTKENLNQ*
Ga0075030_1002168055	3300006162	Watersheds	MMHDYRSAESMSIEGLIGLQRRLSSSKNPFDRVIGTLCVAGLLKERFAVLTDAAVGKLMLDHVWNELNLLEPESVIVEIASERLLHSSPVLVKNVKENLNR*
Ga0075014_1007208881	3300006174	Watersheds	MDGLIDEQRRLSASQNPFERVVGTLCVAGLLKQRLAALTDVAVGQLMFDYVCDEMHVFGPELTICQEATERLLHPSPVLVKSERENLKS*
Ga0116214_11583661	3300009520	Peatlands Soil	VPDDYGGQEEISVEGLIEEQRRLARSKTCFGKVVGTLCVAALLKERLAALPDEAVGQLMFRHVWDDMSCLSPSMTIVGIATERL
Ga0116222_12384322	3300009521	Peatlands Soil	MHDYYSRLSVEGLIEEQRRLSASKNPFERVVGALCVAGLLKKRLASFTDRAVGQLMSDFVWSELNLLGPESVIVEIASERLLHSSPVLVKNTKENLNR*
Ga0116218_10234742	3300009522	Peatlands Soil	VPDDYGGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHPFPLIVKNAKENLNR*
Ga0116218_11805532	3300009522	Peatlands Soil	VGEYCGGVEDISVERVIEAQKRLSASKNPFERVVGTLCVAGLLKQRLAALPDKAVGQLMFDYVWNSMNVFSPELTICEVATERLLQPSSVLGKSAKERLTQ*
Ga0116221_10954131	3300009523	Peatlands Soil	VHDYQCGEEDISVEGLIEAQRRLSVSKNPFERVVGSLCLAGLLKEKLAALPDESVRQLMLDHVWSELDLLGPESVIVEIASERLIERCETSLVCPECGSE
Ga0116133_10190612	3300009623	Peatland	VPDYYGEEKEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR*
Ga0116114_11231242	3300009630	Peatland	VPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGALCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHSAPSQVKNSKENLSE*
Ga0116102_10350412	3300009632	Peatland	VPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGALCVAGLLKERLAASSDAAVGQLMLDHVWSELNLLGPESVIVEIASERLLHPFPLIVKNAKENLNR*
Ga0116113_10148743	3300009638	Peatland	VDDYYSGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR*
Ga0116216_101808203	3300009698	Peatlands Soil	YGGQEEISVEGHIAVQRRLASSKTFFEPVVGTWCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIFEIASERLLHPFPLIVKNAKENLNR*
Ga0116101_10670741	3300009759	Peatland	ISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR*
Ga0116223_103864742	3300009839	Peatlands Soil	MDDYYSGQEEISVEGLIEEQRRLARSKTFSEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVWSELNLLGPESVIVEIASERLLHSSPVLVKNTKENLNR*
Ga0074046_100564023	3300010339	Bog Forest Soil	VQSREEEISVEELIETQRRLLASKNPFERVIGTLWVAGLLKRRLAALSDAAVGQLMFDYVWNDLRVFSPELTICEVATERLLHSSPVPVKSAKERLTR*
Ga0074046_103115182	3300010339	Bog Forest Soil	VHDYRNEDEEVSVEGLIEEQQRLSASENPFDRVVGTLCVAGLLKRKLAGLTDAAIGHLMLNYVWNELNLLGPESVIVEIASERLLHCPPVPVNNVKENLNQ*
Ga0074045_106776362	3300010341	Bog Forest Soil	NSYRFSRSTGYNSNAGGCVPDDYGEEEISVDVLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEAATERLIHPSPVLVKSVKENHNR*
Ga0074045_108820471	3300010341	Bog Forest Soil	VHDYHSEDEEISVEGLIDEQRRLARSRNRCERVLGSLVVSGLLKQRLAALTNEAIGQLVFDHVWNELGIFGPELAICEVATERLLHPSPVLVKSEKENLKS*
Ga0074045_110577991	3300010341	Bog Forest Soil	MHDYRSGEERISVEGLIDTQRRLSASKNPFERVIGTLCVAGLLKRRLAALSDAAVGQLMFDYVWNDMHIFSPELTICEVATDRLLHSSPVLVKSAKERLTR*
Ga0074044_100103125	3300010343	Bog Forest Soil	VPDDYGEEEISVDVLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEAATERLIHPSPVLVKSVKENHNR*
Ga0074044_103201093	3300010343	Bog Forest Soil	VHNYYSQEDKMIVEGLIEDQRRLSASKNPFERVIGALCVSGILKARLAVLPDEAVGQLMVDHVWNELNLLGPESVIVEIASERLLNSSPVLVKSEKENLK
Ga0074044_105663181	3300010343	Bog Forest Soil	VQSGEEKITVEGLIEEQRWLSGSKNPFERVVGTLCVAGLLKQRLAALTDAAVGQLMFDYVCDEMNVFGPDLTICQEATERLLHPSPVLVKSEKENLKS*
Ga0074044_109426911	3300010343	Bog Forest Soil	VQSREEEISVEELIETQRRLLASKNPFERVIGTLCVAGLLKRRLAALSDAAVGQLMFDYVWNDMHVFSPELTICEAATERLLHSSPVLVKSAKERLTR*
Ga0074044_110107241	3300010343	Bog Forest Soil	VLNGEEKISVEGLIEEQRRLSASENPFERVVGTLCVAGLLKRKLAGLTDAAVGQLMFDLVLDDLALFSPAMTICQVA
Ga0136449_1001526468	3300010379	Peatlands Soil	MHDSGQEISVEDLIVEQRRLSASKSPFDRVVGTLCLAGLLRQRLAALTDAAVGQLMFNHVCNEMNGFSPELTICEVATERLLHPAPVLVKSAKERPTR*
Ga0136449_1003950814	3300010379	Peatlands Soil	MRDYCSGEEGISVEGLIDTQRRLSASKNPFERVVGTLCVAGLLKRRLSALSDAAVGQLMFDYVWNDMHVFSPELTICEVATERLLHPTSVLVKSAKERLTR*
Ga0136449_1004030692	3300010379	Peatlands Soil	MDDYYSGQEEISVEGLIEEQRRLARSKTFSEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLLHSSPVPVKNTKENLNQ*
Ga0181524_100928352	3300014155	Bog	VDDYYSGQEEVSVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLLHSSPVPVKNTKENLNQ*
Ga0181535_106174961	3300014199	Bog	GQEETSVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVWSQMNLLGPESVIVEIASERLLHSSPVLVKNTKENLNR*
Ga0181526_100372932	3300014200	Bog	VLDYYSGQEETSVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVWSQMNLLGPESVIVEIASERLLHSSPVLVKNTKENLNR*
Ga0182014_100473353	3300014491	Bog	VHDYYSGEEEISVESLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVWSELNLLGPESVIVEIASERLLHSSPVLVKNTKENLNR*
Ga0182015_101386231	3300014495	Palsa	VIDYYSGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAIGQLMVDHVCNEMNVFSPELTICEVATERLIHSSPVLVKSDKENLNR*
Ga0182024_101559833	3300014501	Permafrost	VHDYYSGEEEISVVSLIEEQRRLARSKTFFQKVVGTLCVAALLKERLAASTDAAVGQLMVDHVWSELNLLGPESVIVEIASERLLHSSPVHVKNTKENLNR*
Ga0181536_103482561	3300014638	Bog	RSTGYNSNAGRCVDDYYSGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAIGQLMVDHVCNEMNVFSPELTICEVATERLLHSSPVPVKNTKENLNQ*
Ga0187802_101662072	3300017822	Freshwater Sediment	MHGSGQEISVEDLIVEQRRLSASKNPFDRVVGTLCLAGLLRQRLAALTDPAVGQLMFNHVCNEMNVFSPELTICEVATERLLRPTPVLVKSAKERLTR
Ga0187818_102670461	3300017823	Freshwater Sediment	VHDYYSREEEISVEGLIEAQRRLSASKNPFERVVGTLCVAGLLKQKVAALTDAVVGQLMLDHVWSELNLLGPESVIVEIAS
Ga0187818_102700952	3300017823	Freshwater Sediment	VHDYYSREKEISVEGLIEAQRRLSVSKNPFERVVGTLCVSGILKARLAVLPDETVGQLMFDHVWSELNLLGPESVIVEIASERLLHSSPVPVKNTKENLNQ
Ga0187856_11256982	3300017925	Peatland	VPDDYGGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLLHSSPVPVKNTKENLNQ
Ga0187801_100252394	3300017933	Freshwater Sediment	MHDSGQEISVEDLIVEQRRLSASKNPFDRVVGTLCLAGLLRQRLAALTDPAVGQLMFNHVCNEMNVFSPELTICEVASERLLRPTPVLVKSAKERLTR
Ga0187853_104039922	3300017940	Peatland	VPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGALCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHPFPLIVKNAKENLNR
Ga0187853_104195142	3300017940	Peatland	QRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0187819_101693343	3300017943	Freshwater Sediment	MHDSGQEISVEDLIVEHRRLSASKSPFDRVVGTLCLAGLLRQRLAALTDAAVGQLMFNHVCNEMNVFSPELTICEVATERL
Ga0187819_103694772	3300017943	Freshwater Sediment	MHDYYSGLSVEGLIEEQRRLSASKNPVKRVVAALCVAGLLKERLASFTDRAVGQLMFDHVWSELNLLGPESVIVEIASERLLHCSPVLVNNVKENLNR
Ga0187819_104224912	3300017943	Freshwater Sediment	AQRRLSASKKPFERVVGTLCLAGLLKRRLAALTDVAVGQLMFDYVCGEMNVFGPELTICQEATERLLHPSPLLVKSVTKDLTR
Ga0187879_100044212	3300017946	Peatland	VPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGALCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHSAPSQVKNSKENLSE
Ga0187817_105009782	3300017955	Freshwater Sediment	MHDSGQEISVEDLIVEQRRLSASKNPFDRVVGTLCLAGLLRQRLAALTDAAVGQLMFNNVCNEMNVFSPELTICEVATERLLRPTPVLAKGAKERLTR
Ga0187817_106558102	3300017955	Freshwater Sediment	MHDYYSGLSVEGLIEEQRRLSASKNPVKRVVAALCVAGLLKERLASFTDRAVGQLMFDHVWSELNLLGPESVIVEIASERLLNSSPLQVRNSKEESHR
Ga0187817_110790771	3300017955	Freshwater Sediment	VLSGEEKISVDGLIEEQRRLSASESPFERVVGTLCVAGLLKRKLAGLTDAAVGQLMFDLVLDELALFSPAMTICQEATERLLHPSP
Ga0181520_100151538	3300017988	Bog	VLDYYSGQEETSVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0187804_100101764	3300018006	Freshwater Sediment	MHDSGQEISVEDLIVEQRRLSASKNPFDRVVGTLCLAGLLRQRLAALTDPAVGQLMFNHVCNEMNVFSPELTICEVATERLLHPTPVLVKSAKERLTR
Ga0187805_101959742	3300018007	Freshwater Sediment	MHDSGQEISVEDLIVEHRRLSASKSPFDRVVGTLCLAGLLRQRLAALTDAAVGQLMFNHVCNEMNVFSPELTICEVATERLLRPTPVLVKSAKERLTR
Ga0187860_13301201	3300018014	Peatland	VPDYYSGQEEISVGGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALPDEAVGQLMLDKVCNEMSVFSPELTICEVATERLIHSSPVLVKTVKENSNR
Ga0187880_13733132	3300018016	Peatland	GRCVDDYYSGQEEVSVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLLHSSPVPVKNTKENLNQ
Ga0187872_100108471	3300018017	Peatland	SNAGGCVPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLLHSSPVPVKNTKENLNQ
Ga0187861_102760541	3300018020	Peatland	VPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGALCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHSAPSQVKNSKEN
Ga0187864_100147865	3300018022	Peatland	VPDDYGGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAGLLKERLAASSDAAVGQLMLDHVWSELNLLGPESVIVEIASERLLHPFPLIVKNAKENLNR
Ga0187857_102130532	3300018026	Peatland	VPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0187869_104163201	3300018030	Peatland	VDDYYSGQEEVSVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0187875_100731013	3300018035	Peatland	VPDYYGEEKEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPLPVKSVKENLNR
Ga0187862_100288175	3300018040	Peatland	VPDDYGGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHSAPSQVKNSKENLSE
Ga0187862_103715361	3300018040	Peatland	YYGEEKEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0187871_104888152	3300018042	Peatland	VPDDYSEQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0187770_107472461	3300018090	Tropical Peatland	MNDHDLAELEIEDLIEQQRRLMHSENRFDRVIGTLCVAGLLKERLGAVSDRALGQLMFDYVWNDMNAFGPELAICEVATKRLLNSSSVKSEKENLKS
Ga0208194_10132403	3300025412	Peatland	KEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0208455_10271291	3300025453	Peatland	VPEDYGRQEEISVEGLIEEQRRLARSKTFFEKVVGALCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHSAPSQVK
Ga0208190_10441883	3300025473	Peatland	VPDYYGEEKEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLATLTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPV
Ga0209890_100077615	3300026291	Soil	VHAHYSGDEKISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKEKLAALTDAAVGQLMIDHVWSELNLLGPESVIVEVASERLFHPSPVLVKSVKENINR
Ga0208043_11894182	3300027570	Peatlands Soil	MHDYYSRLSVEGLIEEQRRLSASKNPFERVVGALCVAGLLKKRLASFTDRAVGQLMSDFVWSELNLLGPESVIVEIASERLLHSSPVLVKNTKENLNR
Ga0208324_10936422	3300027604	Peatlands Soil	VPDDYGGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHPFPLIVKNAKENLNR
Ga0208324_12176121	3300027604	Peatlands Soil	SVERVIEAQKRLSASKNPFERVVGTLCVAGLLKQRLAALPDKAVGQLMFDYVWNSMNVFSPELTICEVATERLLQPSSVLGKSAKERLTQ
Ga0209333_10832532	3300027676	Forest Soil	VDDYYSGQEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAIGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSDKENLNR
Ga0209446_10070653	3300027698	Bog Forest Soil	VEELIETQRRLLASKNPFERVIGTLWVAGLLKRRLAALSDAAVGQLMFDYVWNDLRVFSPELTICEVATERLLHSSPVPVKSAKERLTR
Ga0209038_100435782	3300027737	Bog Forest Soil	MTDYYSQEETISVEGLIDEQRRLARAEDRFERVVGSLVASGLLKQRLVALTDVAVGQLMSDYVCDEMNIFGPELTICQEATERLLYSSPVLVKSDKENLKS
Ga0209656_103845002	3300027812	Bog Forest Soil	VEELIETQRRLLASKNPFERVIGTLCVAGLLKGRLAALSDAAVGQLMFDYVWNDLRVFSPELTICEVATERLLHSSPVPVKSAKERLTR
Ga0209773_103697771	3300027829	Bog Forest Soil	FRLVEESTGECVPDYYRQEEKISVEGLIDEQRRLARAEDRFERVVGSLVASGLLKQRLVALTDVAVGQLMSDYVCDEMNIFGPELTICQEATERLLYSSPVLVKSDKENLKS
Ga0209517_100051949	3300027854	Peatlands Soil	MHDHCSAETMSIEGLIGLQRTLSLSRNPFERVIGTLCVAGILKARLTVLPDEAVGQLMVDHVTDLNLLGPECVIVEVASERLLNTSSVLVKTTKENIHP
Ga0209517_104481671	3300027854	Peatlands Soil	SVEGLIEEQRRLARSKTFFEKVVGTLCVAGLLKERLAASSDAAVGQLMLDHVWSDLNLLGPESVIVEIASERLLHPFPLIVKNAKENLNR
Ga0209415_10000094105	3300027905	Peatlands Soil	MHDSGQEISVEDLIVEQRRLSASKSPFDRVVGTLCLAGLLRQRLAALTDAAVGQLMFNHVCNEMNGFSPELTICEVATERLLHPAPVLVKSAKERPTR
Ga0209415_102521501	3300027905	Peatlands Soil	VPDYYSEEETISVDVLIEEQRRLARSKTCFGKVVGTLCVAALLKERLAALTDAAVGQLMVDHVWSELNLLGPESVIVEIASERLLHSSSVHVKNTKENLNR
Ga0209415_106003462	3300027905	Peatlands Soil	FMHDHCSAETMSIEGLIGLQRTLSLSRNPFERVIGTLCVAGILKARLTVLPDEAVGQLMVDHVTDLNLLGPECVIVEVASERLLNTSSVLVKTTKENIHP
Ga0209698_100046174	3300027911	Watersheds	MMHDYRSAESMSIEGLIGLQRRLSSSKNPFDRVIGTLCVAGLLKERFAVLTDAAVGKLMLDHVWNELNLLEPESVIVEIASERLLHSSPVLVKNVKENLNR
Ga0209698_108363021	3300027911	Watersheds	VEQNTAEISVEGLIDEQQRLSASENPFDRVVGTLCVAGLLKRKLAGLTDAAVGQLMFDLVLDELVLFSPAMTICQVATERLRHSSLVLVKSDKENLNR
Ga0302149_12176532	3300028552	Bog	RRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSLKENLKR
Ga0302301_100008342	3300028731	Palsa	VDDYYSGQEEISVEGLIEEQRRLAFSKTFFEKVVGTLCVAALLKKRLAALTDAAIGQLMVDHVCNEMNVFSPELTICEEATERLIHPSPVLVKSDKENLNR
Ga0302228_100435622	3300028808	Palsa	VDDYYSGQEEISVEGLIEEQRRLAFSKTFFEKVVGTLCVAALLKKRLAALTDAAIGQLMVDHVCNEMNVFSPELTICEVATERLTHPSPVLVKSDKENLNR
Ga0302235_102473582	3300028877	Palsa	GLIEEQRRLAFSKTFFEKVVGTLCVAALLKKRLAALTDAAIGQLMVDHVCNEMNVFSPELTICEEATERLIHPSPVLVKSDKENLNR
Ga0311329_106237662	3300029907	Bog	VNDYYSGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSLKENLKR
Ga0311343_104940682	3300029953	Bog	VHDYYSGEEEISVESLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSLKENLKR
Ga0302274_104972521	3300030041	Bog	DYYSGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSLKENLKR
Ga0302183_100202934	3300030509	Palsa	GQEEISVEGLIEEQRRLAFSKTFFEKVVGTLCVAALLKKRLAALTDAAIGQLMVDHVCNEMNVFSPELTICEEATERLIHPSPVLVKSDKENLNR
Ga0302140_103079143	3300031261	Bog	VNDYYSGQEEISVEGLIEEQRRLTRSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLIHPSPVLVKSLKENLKR
Ga0302320_101811145	3300031524	Bog	VPDYHSGQEEIEGLIEEQRRLAHSKNPIESVIGTLCLAALLKERLAALTDAAVGQLMIDHVWTELNLLGPESVIVEVASERLLNPCLVLVKSVKENLNR
Ga0302326_108313592	3300031525	Palsa	VDDYYSGQEEISVEGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVCNEMNVFSPELTICEVATERLTHPSPVLVKSDKENLNR
Ga0310686_1055737662	3300031708	Soil	VEELIETQRRLSVSKNPFERVVGTLCVAGLLKRRLAALSDAAVGQLMFDYVWNDIHVFSPELTICEVATERLLRPTPVLVKSSKERLTR
Ga0310686_1068091033	3300031708	Soil	MHDSGQEISVEDLIVEQRRLSASKNPFDRVVGTLCLAGLLKRRLAALTDAALGQLMFNHVCDEMNVFSPELTICEVATERLLRPTPVLVKSAKERLTR
Ga0311301_101769586	3300032160	Peatlands Soil	VGEYCGGVEDISVERVIEAQKRLSASKNPFERVVGTLCVAGLLKQRLAALPDKAVGQLMFDYVWNSMNVFSPELTICEVATERLLQPSSVLGKSAKERLTQ
Ga0311301_103136694	3300032160	Peatlands Soil	MDDYYSGQEEISVEGLIEEQRRLARSKTFSEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVWSELNLLGPESVIVEIASERLLHSSPVLVKNTKENLNR
Ga0311301_103518852	3300032160	Peatlands Soil	MRDYCSGEEGISVEGLIDTQRRLSASKNPFERVVGTLCVAGLLKRRLSALSDAAVGQLMFDYVWNDMHVFSPELTICEVATERLLHPTSVLVKSAKERLTR
Ga0326728_100161828	3300033402	Peat Soil	MDDYRSAELEIEDLIELQRRLVHSENRFERVIGTLCVAGLLKERLEALSDRAVGQLMFDYVWNDMNALSPELTICEVATDRLLNSSPAIKPAKENLRS
Ga0326728_102719362	3300033402	Peat Soil	MHYHYSGLSVEGLIEEQRRLSASKNPFERVVVALCVAGLLKERLAAFTDAAVGQLMSDHVWSELNLLGPESVIVEIASERLFRSSPVPVTNTKENLNR
Ga0334850_002531_4452_4757	3300033828	Soil	VDDYYSGQEEISVDGLIEEQRRLARSKTFFEKVVGTLCVAALLKERLAALTDAAVGQLMVDHVWSELNLLGPESVIVEIASERLLHSSPVHVKNTKENLNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089290

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences