Metagenome / Metatranscriptome Family F089272

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089272
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	88 residues
Representative Sequence	MLAIAILLLVLAGGAALAVWLTRALQGFKADSDAALAARNADVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRAT
Number of Associated Samples	97
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.08 %
% of genes from short scaffolds (< 2000 bps)	94.50 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.083 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.183 % of family members)
Environment Ontology (ENVO)	Unclassified (30.275 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.128 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 86.67% β-sheet: 0.00% Coil/Unstructured: 13.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13450	NAD_binding_8	0.92
PF02646	RmuC	0.92
PF00542	Ribosomal_L12	0.92
PF00571	CBS	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0222	Ribosomal protein L7/L12	Translation, ribosomal structure and biogenesis [J]	0.92
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.08 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.08 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.08 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.07 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.07 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	62.39 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	56.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.59 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.92 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.59 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.92 %
Unclassified	root	N/A	0.92 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.59 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.92 %
Unclassified	root	N/A	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c1105489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1969	Open in IMG/M
3300000891\|JGI10214J12806_10630256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300002886\|JGI25612J43240_1063002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300002911\|JGI25390J43892_10019433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1629	Open in IMG/M
3300002916\|JGI25389J43894_1058626	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300004081\|Ga0063454_101730564	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300004157\|Ga0062590_100590499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	973	Open in IMG/M
3300004799\|Ga0058863_11312286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300005181\|Ga0066678_10281356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1084	Open in IMG/M
3300005187\|Ga0066675_10210436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1371	Open in IMG/M
3300005332\|Ga0066388_107072734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300005337\|Ga0070682_101585743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300005366\|Ga0070659_102003730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300005434\|Ga0070709_11505019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300005434\|Ga0070709_11657367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300005438\|Ga0070701_11386812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300005445\|Ga0070708_101446154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300005445\|Ga0070708_102128645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005518\|Ga0070699_100142716	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300005545\|Ga0070695_100145073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1650	Open in IMG/M
3300005545\|Ga0070695_101664121	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005549\|Ga0070704_100270968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1403	Open in IMG/M
3300005558\|Ga0066698_10529981	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005562\|Ga0058697_10105092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300005574\|Ga0066694_10190519	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005574\|Ga0066694_10512823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005575\|Ga0066702_10317253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300005598\|Ga0066706_10204130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1519	Open in IMG/M
3300005598\|Ga0066706_10483388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300006031\|Ga0066651_10165524	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300006031\|Ga0066651_10448334	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006032\|Ga0066696_10323927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1003	Open in IMG/M
3300006032\|Ga0066696_10737173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300006032\|Ga0066696_10816633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300006034\|Ga0066656_10206021	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300006046\|Ga0066652_100082001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2548	Open in IMG/M
3300006175\|Ga0070712_100451440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300006755\|Ga0079222_10533689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	872	Open in IMG/M
3300009012\|Ga0066710_100001368	All Organisms → cellular organisms → Bacteria	18094	Open in IMG/M
3300009094\|Ga0111539_10620731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1259	Open in IMG/M
3300009098\|Ga0105245_11573315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300009098\|Ga0105245_11935763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300009100\|Ga0075418_10396735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1475	Open in IMG/M
3300009137\|Ga0066709_103493448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300009148\|Ga0105243_10067675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2876	Open in IMG/M
3300009176\|Ga0105242_12979201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300009553\|Ga0105249_10273413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1684	Open in IMG/M
3300010043\|Ga0126380_10331212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300010147\|Ga0126319_1648648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300010326\|Ga0134065_10034928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1490	Open in IMG/M
3300010326\|Ga0134065_10246024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300010362\|Ga0126377_12785591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300010366\|Ga0126379_12134911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300010375\|Ga0105239_11436418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300010396\|Ga0134126_10832393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300011003\|Ga0138514_100072417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300012206\|Ga0137380_10123962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2360	Open in IMG/M
3300012208\|Ga0137376_10155687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1967	Open in IMG/M
3300012210\|Ga0137378_11735146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300012285\|Ga0137370_10357465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300012350\|Ga0137372_10303451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300012469\|Ga0150984_113203425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300012910\|Ga0157308_10178817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300012958\|Ga0164299_10279462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300012976\|Ga0134076_10563784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300012985\|Ga0164308_10205025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1506	Open in IMG/M
3300013297\|Ga0157378_10223314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1792	Open in IMG/M
3300014157\|Ga0134078_10492191	Not Available	568	Open in IMG/M
3300018071\|Ga0184618_10094685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1163	Open in IMG/M
3300018431\|Ga0066655_11092902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300018482\|Ga0066669_11137021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300018482\|Ga0066669_12288687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300021418\|Ga0193695_1132185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300022694\|Ga0222623_10144211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300025885\|Ga0207653_10407160	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300025898\|Ga0207692_10393698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300025906\|Ga0207699_11433859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300025915\|Ga0207693_10419609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300025915\|Ga0207693_11347215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300025928\|Ga0207700_10473104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300025933\|Ga0207706_10472111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1084	Open in IMG/M
3300025935\|Ga0207709_10994540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300025940\|Ga0207691_10632266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300025961\|Ga0207712_10331109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300026330\|Ga0209473_1316408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300026343\|Ga0209159_1142651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300026540\|Ga0209376_1136293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1196	Open in IMG/M
3300026548\|Ga0209161_10123355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1530	Open in IMG/M
3300026550\|Ga0209474_10507411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300027765\|Ga0209073_10520225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300027909\|Ga0209382_10933655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300028708\|Ga0307295_10136867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300028709\|Ga0307279_10028988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300028715\|Ga0307313_10084041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	959	Open in IMG/M
3300028717\|Ga0307298_10135691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300028721\|Ga0307315_10000163	All Organisms → cellular organisms → Bacteria	13915	Open in IMG/M
3300028790\|Ga0307283_10059419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300028791\|Ga0307290_10393281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300028793\|Ga0307299_10076645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1242	Open in IMG/M
3300028810\|Ga0307294_10076061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300028811\|Ga0307292_10262814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300028824\|Ga0307310_10467919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300028884\|Ga0307308_10234933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300030902\|Ga0308202_1074921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300032075\|Ga0310890_10855053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300032205\|Ga0307472_100352856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1208	Open in IMG/M
3300033412\|Ga0310810_11009865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300033550\|Ga0247829_10734633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300034668\|Ga0314793_157832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.49%
Host-Associated	Host-Associated	16.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.73%
Plants	Host-Associated → Plants	15.60%
Aquatic	Environmental → Aquatic	2.75%
Human	Host-Associated → Human	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.68%
Sediment	Environmental → Aquatic → Sediment	1.83%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.92%
Digestive System	Host-Associated → Human → Digestive System	0.92%
Phylloplane	Host-Associated → Plants → Phylloplane	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.39%
Loam	Environmental → Terrestrial → Soil → Loam	17.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.92%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.92%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.92%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.92%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.92%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_11054895	2228664021	Soil	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLA
JGI10214J12806_106302561	3300000891	Soil	MLAIAIVLVVLVGCAALAVWFTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELD
JGI25612J43240_10630022	3300002886	Grasslands Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASTQTNA
JGI25390J43892_100194334	3300002911	Grasslands Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRM
JGI25389J43894_10586262	3300002916	Grasslands Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASTQTNAIHKQLGDVGRATTLLAEHAKELGQLQQ
Ga0063454_1017305642	3300004081	Soil	VVTLGLAFVILVALGGFAVWLTRALQSFSAHADTGFASRNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRAT
Ga0062590_1005904993	3300004157	Soil	MLAIAIVLVVLVGCAALAVWFTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVG
Ga0058863_113122862	3300004799	Host-Associated	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNA
Ga0066678_102813561	3300005181	Soil	MLAFAIMLLVLAGGAALAIWLTRALQAFRADSDATLASRNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHRQLGDVGRATTLLAEHA
Ga0066675_102104361	3300005187	Soil	MLAIATLLLVLAGAGALAVWLTRALQVFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELGQ
Ga0066388_1070727342	3300005332	Tropical Forest Soil	MLAVATLLFVLVGAAALAVWLTRALQTFKADSDATLASRNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGD
Ga0070682_1015857431	3300005337	Corn Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTK
Ga0070659_1020037302	3300005366	Corn Rhizosphere	MLAIGILLLVLAGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELGQL
Ga0070709_115050192	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLVIAILLLTLVGGAALAVWLTRALQLFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQ
Ga0070709_116573672	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGR
Ga0070701_113868122	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGILLLVLAGGAALAVWLTRALQGFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAE
Ga0070708_1014461541	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGSLLLVLAGGAALAVWLTRALQGFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELGQLQQVL
Ga0070708_1021286451	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGILLLVLAGGAALAVWLTRALQSFKSDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHQQLGDVGRATTLLAEHAKELGQLQQVLRPPKA
Ga0070699_1001427161	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLVIGIMLLVLAGGAALAVWLGRALQSLKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVG
Ga0070695_1001450731	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGILLLVLVGGAALAVWLARALQGFKSDSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGR
Ga0070695_1016641211	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGILLLVLAGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHA
Ga0070704_1002709683	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHK
Ga0066698_105299812	3300005558	Soil	MLTIVVTLVVLAALGALAVWLAKTLDAFRAQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNALHEKLGDVGRATTTLAEHAKGLAQLQQVLRPPKARGGF
Ga0058697_101050923	3300005562	Agave	MLGLVVVLIVLVAVGALAYWLPRALVAFRVESAAQLAERNAEMERRLQGLNETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATSLLAEQAKGLG
Ga0066694_101905191	3300005574	Soil	MLTIALTLVLLAALGALAVWLAKTLDAFRAQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDV
Ga0066694_105128231	3300005574	Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEH
Ga0066702_103172531	3300005575	Soil	MLALAVLLLVLSGGAALAVWLTRALQSFRADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHRQLG
Ga0066706_102041303	3300005598	Soil	MLAFAIMLLVLAGGAALAIWLTRALQAFRADSDATLASRNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHRQLGDVGRATTLLAEHAKELGQ
Ga0066706_104833883	3300005598	Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASTQTN
Ga0066651_101655241	3300006031	Soil	MLAIATLLLVLAGAGALAVWLTRALQVFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDR
Ga0066651_104483342	3300006031	Soil	MLTIALTLVLLAALGALAVWLAKTLDTFRAQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRATTTLAEHAKELGQLQQVL
Ga0066696_103239273	3300006032	Soil	MLTLVVALVLLAGLGTLAVWLARTLQAFRVQAEAGLDQRNGDVERRLQGITETMDRRLGALDDKVDRRLEHASKQTNA
Ga0066696_107371732	3300006032	Soil	MLAFAIMLLVLAGGAALAIWLTRALQAFRADSDATLASRNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHRQLGDVGRATTLLAEHAKELGQLQQ
Ga0066696_108166331	3300006032	Soil	MLAIAILLLVLAGGAALAVWLGRTLHSLKADSDATLAARNAEVGRQLEGITATMDRRLGELDT
Ga0066656_102060213	3300006034	Soil	MLAIVSLLFVLAGGAALAVWLTRVLQSFKADSDSTLAARNAEVGRQLQGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQL
Ga0066652_1000820011	3300006046	Soil	MLTIVVTLVLLAALGALAVWLAKTLDAFRAQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRATTTLAEHAKELGQLQQVL
Ga0070712_1004514403	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGSLLLVLAGGAALAVWLTRALQGFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHAS
Ga0079222_105336891	3300006755	Agricultural Soil	MLAIAILLLVLVGGAALALWLTRALQTFKADSDATLAVRNAEVGRQLEGITATMDRRLGELDTKVDRRL
Ga0066710_1000013681	3300009012	Grasslands Soil	MLAIATLLLVLAGAGALAVWLTRALQVFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAK
Ga0111539_106207311	3300009094	Populus Rhizosphere	MLTIVVTLVLLAALGALAVWLAKTLDAFRTQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDV
Ga0105245_115733152	3300009098	Miscanthus Rhizosphere	MLAIGILLLVLAGGAVLAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELG
Ga0105245_119357632	3300009098	Miscanthus Rhizosphere	MLAIGILLLVLVGGAALAVWLARALQGFKSDSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAE
Ga0075418_103967353	3300009100	Populus Rhizosphere	MLTIVVTLVLLAALGALAVWLAKTLDAFRTQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRATTTLAEHAKEL
Ga0066709_1034934481	3300009137	Grasslands Soil	MLTIVVTLVVLAALGALAVWLAKTLDAFRAQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRATTTLAEHAK
Ga0105243_100676755	3300009148	Miscanthus Rhizosphere	MLAIGILLLVLAGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLQGITATMDRRLGELDTKVDRRMEHASKQTNAIHQQLG
Ga0105242_129792012	3300009176	Miscanthus Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAE
Ga0105249_102734131	3300009553	Switchgrass Rhizosphere	MLAIGSLLLVLAGGAALAVWLTRALQGFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRR
Ga0126380_103312121	3300010043	Tropical Forest Soil	VLTIVFTLVLLAALGALAVWLAKTLDAFRAQTETGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRATTTLAEHAKEL
Ga0126319_16486481	3300010147	Soil	MLAIAILLLVLVGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVD
Ga0134065_100349281	3300010326	Grasslands Soil	MLAIATLLLVLAGAGALAVWLTRALQVFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRAT
Ga0134065_102460242	3300010326	Grasslands Soil	MLAIVSLLFVLAGGAALAVWLTRVLQSFKADSDSTLAARNAEVGRQLQGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELG
Ga0126377_127855912	3300010362	Tropical Forest Soil	MLTIVVTLVLLAALGVLAVWLAKTLDAFRAQTESGLDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRA
Ga0126379_121349111	3300010366	Tropical Forest Soil	MLTIGVTLVLLAALTALAVWLAKTLDAFRTQTEAGLDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRATTTLAEHA
Ga0105239_114364182	3300010375	Corn Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAKELGQ
Ga0134126_108323933	3300010396	Terrestrial Soil	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQ
Ga0138514_1000724171	3300011003	Soil	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGR
Ga0137380_101239626	3300012206	Vadose Zone Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAE
Ga0137376_101556871	3300012208	Vadose Zone Soil	MLAIATLFLVLAGAAALAVWLTRALQAFKADSDAILAGRNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGR
Ga0137378_117351461	3300012210	Vadose Zone Soil	MLAIAIMLLVLAGGAALAVWLARALQSFKADSDATLATRNAEVGRQLQGITATMDRRLGELDTK
Ga0137370_103574651	3300012285	Vadose Zone Soil	MLVIAILLLVLGGGATLAVWLTRALQGFKTDSDAALAARNAEVGRQLEGITATMDRRLGELDTK
Ga0137372_103034513	3300012350	Vadose Zone Soil	MLTIATLLLVLAGGAALAVWLTRALQAFRADSDATMASRNAEVGRQLEGITATMDRRLGELDTKVDR
Ga0150984_1132034252	3300012469	Avena Fatua Rhizosphere	VLTFVLVFVVLIGLVGLAVWLTRTLQAFSSQSDAGFAARNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRAT
Ga0157308_101788172	3300012910	Soil	MLAIAIVLVVLVGCAALAVWFTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDR
Ga0164299_102794623	3300012958	Soil	VLTLALIVIVLLALGGLAVWLTRTLQAFSVQADAGFAARNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRAT
Ga0134076_105637842	3300012976	Grasslands Soil	MLAIAILLLVLAGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLEGMTATMDRRLGELDTKVDRRMEHASTQTNAIHK
Ga0164308_102050254	3300012985	Soil	VLTLALIVIVLLALGGLAVWLTRTLQAFSVQADAGFASRNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAKELGQ
Ga0157378_102233145	3300013297	Miscanthus Rhizosphere	MLAIGILLLVLAGGAVLAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEH
Ga0134078_104921911	3300014157	Grasslands Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASK
Ga0184618_100946851	3300018071	Groundwater Sediment	MLAIGIMLLVLAGGAALAVWLTRALQSFKADSDAALAARNADVGRQLQGITATMDRRLGELDTKVDRRMEHASK
Ga0066655_110929022	3300018431	Grasslands Soil	MLVIAILLLVLGGGATLAVWLTRALQGFKTDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASTQTNAIHKQLGDVGRATTLLAEH
Ga0066669_111370212	3300018482	Grasslands Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLDGITPTMDRRLGAFDYKVYRRMAHGCKQTNT
Ga0066669_122886872	3300018482	Grasslands Soil	MLAIATLLLVLAGAAALAVWLTRALQAFKADSDATLAGRNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQL
Ga0193695_11321851	3300021418	Soil	MLEIAILLLVLAGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEH
Ga0222623_101442113	3300022694	Groundwater Sediment	MLAIGSLLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKE
Ga0207653_104071601	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRTLQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHA
Ga0207692_103936983	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIAIVLVVVVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAE
Ga0207699_114338591	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGILLLVLAGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELGQLQQVLRP
Ga0207693_104196091	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTK
Ga0207693_113472151	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLVIAILLLTLVGGAALAVWLTRALQLFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHK
Ga0207700_104731041	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRAT
Ga0207706_104721113	3300025933	Corn Rhizosphere	MLAIGILLLVLAGGAVLAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHA
Ga0207709_109945401	3300025935	Miscanthus Rhizosphere	MLAIGSLLLVLAGGAALAVWLTRALQGFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTN
Ga0207691_106322661	3300025940	Miscanthus Rhizosphere	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAK
Ga0207712_103311093	3300025961	Switchgrass Rhizosphere	MLAIGSLLLVLAGGAALAVWLTRALQGFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQ
Ga0209473_13164082	3300026330	Soil	MLAIATLLLVLAGAGALAVWLTRALQVFKADSDATLAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELG
Ga0209159_11426513	3300026343	Soil	MLAIAILLLVLAGGAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHA
Ga0209376_11362931	3300026540	Soil	MLAFAIMLLVLAGGAALAIWLTRALQAFRADSDATLASRNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHRQLGDVGRATT
Ga0209161_101233551	3300026548	Soil	MLAFAIMLLVLAGGAALAIWLTRALQAFRADSDATLASRNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHRQLGDVGRATTLLAEHAKELGQLQQVLRP
Ga0209474_105074112	3300026550	Soil	MLTLVVALVLLAGLGTLAVWLARTLQAFRVQAEAGLDQRNGDVERRLQGITETMDRRLGALDDKVDRRLEHASKQTNAIHKQLGDVGRATATLAEQAKELGQLQQVLRPPKARG
Ga0209073_105202252	3300027765	Agricultural Soil	MLAIAILLLVLVGGAALALWLTRALQTFKADSDATLAVRNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAKEL
Ga0209382_109336551	3300027909	Populus Rhizosphere	MLTIVVTLVLLAALGALAVWLAKTLDAFRTQTESGFDARNADVERRLQGITETMDRRLGLLDEKVDRRLEHASKQTNAIHEKLGDVGRATTTLAEHAKELAQLQ
Ga0307295_101368671	3300028708	Soil	MLAIGSLLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAK
Ga0307279_100289881	3300028709	Soil	MLAIGSLLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKV
Ga0307313_100840411	3300028715	Soil	MLAIAILLLVLAGGAALAVWLTRALQGFKADSDAALAARNADVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRAT
Ga0307298_101356911	3300028717	Soil	VLTLAFIVVVLAALGGLAVWLTRTLQAFSAQADAGFAVRNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRA
Ga0307315_1000016317	3300028721	Soil	VLTLAFIVVVLAALGGLAVWLTRTLQAFSAQADAGFAVRNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAK
Ga0307283_100594193	3300028790	Soil	VLTLAFIVVVLAALGGLAVWLTRTLQAFSAQADAGFAVRNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAKELGQ
Ga0307290_103932811	3300028791	Soil	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHK
Ga0307299_100766451	3300028793	Soil	MLAIAILLLVLAGGAALAVWLTRALQGFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVD
Ga0307294_100760611	3300028810	Soil	VLTLAFIVVVLAALGGLAVWLTRTLQAFSAQADAGFAVRNAEVERRLQGITETMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAKEL
Ga0307292_102628142	3300028811	Soil	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELGQLQQVLRPPK
Ga0307310_104679191	3300028824	Soil	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQL
Ga0307308_102349331	3300028884	Soil	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQ
Ga0308202_10749211	3300030902	Soil	VTILATILVLLIGGSALAVWLSRVLDRLLSHRNAEVDGRLEAITETMDRRLGELDTKVDRRLEVASKQTNAIHKQLGDVGRATTTLAEHAKELGQLQQVLR
Ga0310890_108550531	3300032075	Soil	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQ
Ga0307472_1003528561	3300032205	Hardwood Forest Soil	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGDVGRATTTLAEHAKELGQLQQVLRPPK
Ga0310810_110098652	3300033412	Soil	MLAIGILLLVLAGGAALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQTNAIHKQLGDVGRATTLLAEHAKELGQLQQVLR
Ga0247829_107346331	3300033550	Soil	MLAIGILLLVLAGGGALAVWLTRALQGFKVDSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRMEHASKQT
Ga0314793_157832_263_517	3300034668	Soil	MLAIAIVLVVLVGCAALAVWLTRALQVFKADSDAALAARNAEVGRQLEGITATMDRRLGELDTKVDRRLEHASKQTNAIHKQLGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089272

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences