Metagenome / Metatranscriptome Family F089265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089265
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	136 residues
Representative Sequence	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAIT
Number of Associated Samples	103
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	95.41 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	99.08 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.569 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.596 % of family members)
Environment Ontology (ENVO)	Unclassified (48.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.39% β-sheet: 13.14% Coil/Unstructured: 28.47%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13006	Nterm_IS4	1.83
PF07731	Cu-oxidase_2	0.92
PF00069	Pkinase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.67
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
All Organisms	root	All Organisms	17.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
cellular organisms	root	All Organisms → cellular organisms	17.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	17.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.59 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.75 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.83 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.92 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4.59 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.75 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.92 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.92 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.92 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.92 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	4.59 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.83 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.92 %
Intrasporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium	0.92 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	0.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.92 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.92 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.92 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	4.59 %
Micromonospora nigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora nigra	1.83 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	0.92 %
unclassified Microbispora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora	0.92 %
Streptomyces violaceusniger group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group	0.92 %
Candidatus Frankia alpina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	0.92 %
Actinoplanes auranticolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes auranticolor	0.92 %
Mycolicibacterium vaccae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium vaccae	0.92 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.57 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	4.59 %
Micromonospora nigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora nigra	1.83 %
Microbispora sp. KK1-11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. KK1-11	0.92 %
Streptomyces hygroscopicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces hygroscopicus	0.92 %
Intrasporangium oryzae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	0.92 %
Candidatus Frankia alpina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	0.92 %
Actinoplanes auranticolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes auranticolor	0.92 %
Mycolicibacterium vaccae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium vaccae	0.92 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003659\|JGI25404J52841_10013275	Not Available	1786	Open in IMG/M
3300004479\|Ga0062595_102366712	Not Available	526	Open in IMG/M
3300005332\|Ga0066388_103621228	Not Available	789	Open in IMG/M
3300005343\|Ga0070687_100410016	Not Available	891	Open in IMG/M
3300005347\|Ga0070668_101067072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300005355\|Ga0070671_100093040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	2526	Open in IMG/M
3300005356\|Ga0070674_101495604	Not Available	607	Open in IMG/M
3300005367\|Ga0070667_102191538	Not Available	520	Open in IMG/M
3300005434\|Ga0070709_10442779	Not Available	977	Open in IMG/M
3300005436\|Ga0070713_101020088	Not Available	798	Open in IMG/M
3300005436\|Ga0070713_101144828	Not Available	752	Open in IMG/M
3300005539\|Ga0068853_100354457	Not Available	1365	Open in IMG/M
3300005546\|Ga0070696_100520966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium vaccae	949	Open in IMG/M
3300005547\|Ga0070693_100280549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Intrasporangium → Intrasporangium oryzae	1115	Open in IMG/M
3300005548\|Ga0070665_102250402	Not Available	548	Open in IMG/M
3300005549\|Ga0070704_102029253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violaceusniger group → Streptomyces hygroscopicus	534	Open in IMG/M
3300005563\|Ga0068855_101166100	Not Available	802	Open in IMG/M
3300005566\|Ga0066693_10270163	Not Available	676	Open in IMG/M
3300005575\|Ga0066702_10611070	Not Available	654	Open in IMG/M
3300005576\|Ga0066708_10942572	Not Available	537	Open in IMG/M
3300005587\|Ga0066654_10121890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1291	Open in IMG/M
3300005614\|Ga0068856_100921719	Not Available	892	Open in IMG/M
3300005718\|Ga0068866_10434183	Not Available	855	Open in IMG/M
3300005842\|Ga0068858_100694976	Not Available	989	Open in IMG/M
3300006028\|Ga0070717_10970035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300006028\|Ga0070717_11144449	Not Available	708	Open in IMG/M
3300006031\|Ga0066651_10361859	Not Available	777	Open in IMG/M
3300006175\|Ga0070712_100649181	Not Available	896	Open in IMG/M
3300006804\|Ga0079221_11040308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora nigra	619	Open in IMG/M
3300006806\|Ga0079220_11316358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora nigra	606	Open in IMG/M
3300006953\|Ga0074063_13651245	Not Available	592	Open in IMG/M
3300009011\|Ga0105251_10285090	Not Available	747	Open in IMG/M
3300009098\|Ga0105245_11030958	Not Available	868	Open in IMG/M
3300009148\|Ga0105243_12253080	Not Available	582	Open in IMG/M
3300009553\|Ga0105249_12153821	Not Available	630	Open in IMG/M
3300010337\|Ga0134062_10235452	Not Available	847	Open in IMG/M
3300010371\|Ga0134125_10658759	Not Available	1155	Open in IMG/M
3300010373\|Ga0134128_13060958	Not Available	514	Open in IMG/M
3300010400\|Ga0134122_13088326	Not Available	520	Open in IMG/M
3300012203\|Ga0137399_10549390	Not Available	970	Open in IMG/M
3300012208\|Ga0137376_11271166	Not Available	626	Open in IMG/M
3300012285\|Ga0137370_10246590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes auranticolor	1057	Open in IMG/M
3300012357\|Ga0137384_10183414	Not Available	1752	Open in IMG/M
3300012361\|Ga0137360_10757126	Not Available	835	Open in IMG/M
3300012685\|Ga0137397_10529290	Not Available	878	Open in IMG/M
3300012915\|Ga0157302_10367688	Not Available	582	Open in IMG/M
3300012985\|Ga0164308_10976784	Not Available	751	Open in IMG/M
3300012988\|Ga0164306_10186585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia alpina	1445	Open in IMG/M
3300012989\|Ga0164305_10894507	Not Available	745	Open in IMG/M
3300013104\|Ga0157370_10699368	Not Available	925	Open in IMG/M
3300013105\|Ga0157369_11638960	Not Available	654	Open in IMG/M
3300013306\|Ga0163162_11934452	Not Available	675	Open in IMG/M
3300013308\|Ga0157375_10570899	Not Available	1292	Open in IMG/M
3300014325\|Ga0163163_11044252	Not Available	880	Open in IMG/M
3300014969\|Ga0157376_11249168	Not Available	772	Open in IMG/M
3300015245\|Ga0137409_11293105	Not Available	572	Open in IMG/M
3300017792\|Ga0163161_11097636	Not Available	684	Open in IMG/M
3300018086\|Ga0187769_11200637	Not Available	574	Open in IMG/M
3300018482\|Ga0066669_12186235	Not Available	524	Open in IMG/M
3300019361\|Ga0173482_10339609	Not Available	676	Open in IMG/M
3300020012\|Ga0193732_1084515	Not Available	512	Open in IMG/M
3300021178\|Ga0210408_10823460	Not Available	726	Open in IMG/M
3300021363\|Ga0193699_10473276	Not Available	514	Open in IMG/M
3300024254\|Ga0247661_1006873	Not Available	1841	Open in IMG/M
3300024279\|Ga0247692_1036583	Not Available	756	Open in IMG/M
3300024288\|Ga0179589_10523858	Not Available	551	Open in IMG/M
3300024323\|Ga0247666_1025922	Not Available	1239	Open in IMG/M
3300025898\|Ga0207692_10122054	Not Available	1460	Open in IMG/M
3300025899\|Ga0207642_10770726	Not Available	610	Open in IMG/M
3300025901\|Ga0207688_10144733	Not Available	1400	Open in IMG/M
3300025906\|Ga0207699_10116606	Not Available	1720	Open in IMG/M
3300025906\|Ga0207699_10241469	Not Available	1241	Open in IMG/M
3300025907\|Ga0207645_10231613	Not Available	1219	Open in IMG/M
3300025910\|Ga0207684_11262115	Not Available	610	Open in IMG/M
3300025913\|Ga0207695_10949483	Not Available	739	Open in IMG/M
3300025914\|Ga0207671_10666529	Not Available	828	Open in IMG/M
3300025915\|Ga0207693_10262129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. KK1-11	1355	Open in IMG/M
3300025915\|Ga0207693_10850423	Not Available	702	Open in IMG/M
3300025917\|Ga0207660_10881643	Not Available	730	Open in IMG/M
3300025918\|Ga0207662_10084017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	1947	Open in IMG/M
3300025922\|Ga0207646_11064560	Not Available	713	Open in IMG/M
3300025924\|Ga0207694_10299744	Not Available	1323	Open in IMG/M
3300025928\|Ga0207700_10954112	Not Available	768	Open in IMG/M
3300025934\|Ga0207686_11564948	Not Available	544	Open in IMG/M
3300025938\|Ga0207704_10872764	Not Available	755	Open in IMG/M
3300025941\|Ga0207711_10187367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	1884	Open in IMG/M
3300025960\|Ga0207651_10771896	Not Available	851	Open in IMG/M
3300025972\|Ga0207668_10409136	Not Available	1149	Open in IMG/M
3300026041\|Ga0207639_11834380	Not Available	567	Open in IMG/M
3300026078\|Ga0207702_11616760	Not Available	641	Open in IMG/M
3300027031\|Ga0208986_1001706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1753	Open in IMG/M
3300027725\|Ga0209178_1088989	Not Available	1022	Open in IMG/M
3300028379\|Ga0268266_10885006	Not Available	863	Open in IMG/M
3300028379\|Ga0268266_11671634	Not Available	612	Open in IMG/M
3300028379\|Ga0268266_12061927	Not Available	543	Open in IMG/M
3300028381\|Ga0268264_10433221	Not Available	1270	Open in IMG/M
3300028799\|Ga0307284_10498131	Not Available	500	Open in IMG/M
3300028824\|Ga0307310_10480545	Not Available	624	Open in IMG/M
3300028875\|Ga0307289_10273058	Not Available	696	Open in IMG/M
3300031200\|Ga0307496_10131387	Not Available	518	Open in IMG/M
3300031740\|Ga0307468_102348616	Not Available	519	Open in IMG/M
3300031799\|Ga0318565_10378115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300031820\|Ga0307473_10910319	Not Available	636	Open in IMG/M
3300032174\|Ga0307470_10356645	Not Available	1017	Open in IMG/M
3300032180\|Ga0307471_101832477	Not Available	758	Open in IMG/M
3300032898\|Ga0335072_10544741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	1186	Open in IMG/M
3300033004\|Ga0335084_10748372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	994	Open in IMG/M
3300033134\|Ga0335073_10351234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	1746	Open in IMG/M
3300034820\|Ga0373959_0023152	Not Available	1206	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.30%
Host-Associated	Host-Associated	36.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.30%
Plants	Host-Associated → Plants	36.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.84%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.45%
Loam	Environmental → Terrestrial → Soil → Loam	20.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027031	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25404J52841_100132752	3300003659	Tabebuia Heterophylla Rhizosphere	MTVWAWLKLTACLWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGTMASAPITFDARQWNRQIRTAQGLTHAPGAVPLLTR
Ga0062595_1023667121	3300004479	Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTMVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYA
Ga0066388_1036212281	3300005332	Tropical Forest Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAVRDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDA
Ga0070687_1004100161	3300005343	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAV
Ga0070668_1010670721	3300005347	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWGRQARTAQG
Ga0070671_1000930401	3300005355	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAIT
Ga0070674_1014956041	3300005356	Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLSWWLLLAVAAIAAWPVTMVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASA
Ga0070667_1021915381	3300005367	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAIKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAV
Ga0070709_104427792	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPAVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAP
Ga0070713_1010200881	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWFIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALA
Ga0070713_1011448281	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALA
Ga0068853_1003544572	3300005539	Corn Rhizosphere	VTVWAWLKLTAALWLIRKAIKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAG
Ga0070696_1005209661	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALA
Ga0070693_1002805491	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAIT
Ga0070665_1022504021	3300005548	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAG
Ga0070704_1020292531	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTVWAWLKLTACLWLIRKAFKLAWWLLLAVATVTTWPVTVVAGAGYLAAWLRGSPPVRLYRAAAWTLPVTAAWLADLEIRVPGFLAARDPGQTWAGGWDQLTTAHLAAVFAALAPVTLPAGLALAGM
Ga0068855_1011661002	3300005563	Corn Rhizosphere	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTIVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLATDRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMA
Ga0066693_102701631	3300005566	Soil	VTVWTWLKLTACLWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTASWLIYLEIRVPGFLAARDPRRTWAGGWNHLTTTRLVGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPI
Ga0066702_106110701	3300005575	Soil	VTVWSWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTVVTATGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPGRTWAGGWNHLTTARLANVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWTRQVRTAQGLTHAPGAVPLL
Ga0066708_109425721	3300005576	Soil	VTVWSWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTVVTATGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPGRTWAGGWNHLTTARLANVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITF
Ga0066654_101218904	3300005587	Soil	VTVWSWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTVVTATGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPGRTWAGGWNHLTTARLANVFAALAPAVLPAGLALAGL
Ga0068856_1009217191	3300005614	Corn Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLAL
Ga0068866_104341831	3300005718	Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAIKLTWWLLLAVAAIAAWPVTMVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKM
Ga0068858_1006949762	3300005842	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAV
Ga0070717_109700351	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSLWGWLKLTAAIWLLRKAFRLAWWLLLAVGAVAAWPVTVPAAAGYILAWLRGWPPVRLFRAAAWSLPMGAAWLAWLEIRVPGFLAARDPGRTWFGGWGQLTPAGLAGVFAVLAPVCVPAGLALAGLVWAWRNYAITAGLGGITASAPAIFDNRQWNRQVRTA
Ga0070717_111444493	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPAVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPA
Ga0066651_103618592	3300006031	Soil	VTAWTWLKLTACLWLVRKAFKLTWWLLLAVAAIAAWPVTVVSAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLAL
Ga0070712_1006491813	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVL
Ga0079221_110403081	3300006804	Agricultural Soil	MTVWAWLKLTACLWLIRKAFRLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPAGLMLAGLVWAWRNYAITAG
Ga0079220_113163581	3300006806	Agricultural Soil	MTVWAWLKLTACLWLIRKAFRLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPAGLMLAGLVWAWRNYAITAGLA
Ga0074063_136512452	3300006953	Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLASRDPRRTWAGSWDHLTTDRLVGVFAALAPAVLPAGL
Ga0105251_102850902	3300009011	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQVRTAQG
Ga0105245_110309581	3300009098	Miscanthus Rhizosphere	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTIVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPVGLVLAGLVWAWRNYAITAGL
Ga0105243_122530802	3300009148	Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGSWDHLATARLAGVFAALAPAVLPVGLVLAGLVWAWRNYAITAGLGGK
Ga0105249_121538211	3300009553	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPA
Ga0134062_102354521	3300010337	Grasslands Soil	MTVWAWLKLTAALWLIRKAFRLAWWLLLAVAAVAAWPVTVVTATGYTVAWLRGWPPVRLYRAAAWSLPVSAAWLITLEIQVPGFLAVRDPRRTWAGGWDHVTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQIRTAQGL
Ga0134125_106587593	3300010371	Terrestrial Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAP
Ga0134128_130609581	3300010373	Terrestrial Soil	RRRGHGGGSVTVWAWVKLTACLWLIRKAFRLAWWLLLAVAAVAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPVTATWLITLEIQVPWFLAARDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQIRT
Ga0134122_130883261	3300010400	Terrestrial Soil	HGGGAVTVWAWLKLTACLWLIRKAFRLAWWLLLVVAAIAVWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPVGLVLAGLVWAWRNYAITAGLGGKMASAPITFNARQWNRQVRTAQGLTH
Ga0137399_105493901	3300012203	Vadose Zone Soil	VTVWAWLKLTFFLWLIRKAFKLAWWLLLAVATVTTWPVTVVAGTGYLAAWLRGWPPVRLYRAAAWTLPVTAAWLADLEIQVPGFLAARDPGQTWAGGWDQLTTAHLAAVFAAL
Ga0137376_112711661	3300012208	Vadose Zone Soil	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAVAAWPVTVVTATGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPGRTWAGGWNHLTTARLANVFAALAPAVLPAGLALAGL
Ga0137370_102465903	3300012285	Vadose Zone Soil	VSVWSWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTVVTATGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPGRTWAGGWNHLTTARLANVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQ
Ga0137384_101834143	3300012357	Vadose Zone Soil	MTVWAWLKLTACLWLIRKAFRLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPAGLVLAGLVWAWRNYAITAGLGGKMASAPITFDARQWGRQVRTAQGLTH
Ga0137360_107571262	3300012361	Vadose Zone Soil	VTVWAWLKLTFFLWLIRKAFKLAWWLLLAVATVTTCPVTVVAGTGYLAAWLRGWPPVRLYRAAAWTLPVTAAWLADLEIRVPGFLAARDPGQTWAGGWDQLTTAHLAAVFAALAPVTLPAGLALAGMVWAWRNYAV
Ga0137397_105292902	3300012685	Vadose Zone Soil	MKLTACLWLIRKAFRLAWWLLLAVAAVAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVFPVGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWN
Ga0157302_103676881	3300012915	Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFVAARDPRQTWAGGWDHLTTTRLAGVFA
Ga0164308_109767841	3300012985	Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAP
Ga0164306_101865851	3300012988	Soil	VTVWAWLKLTAALWLIRKAIKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLISLEIQVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLP
Ga0164305_108945072	3300012989	Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTAVAAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLISLEIQVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLP
Ga0157370_106993681	3300013104	Corn Rhizosphere	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTIVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLATDRLAGVFAALAPAVLPAGLALAGLVWAW
Ga0157369_116389601	3300013105	Corn Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAA
Ga0163162_119344521	3300013306	Switchgrass Rhizosphere	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTIVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLATDRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGK
Ga0157375_105708991	3300013308	Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVL
Ga0163163_110442521	3300014325	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWQVTVVTAAGYTAAWLRGWPAVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRN
Ga0157376_112491682	3300014969	Miscanthus Rhizosphere	MTVRAWLKLTAALWLIRKAFKLTWWLLLVVAAIAVWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIKVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPVGLVLAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQVRTAQGLTRAPGAVPLLARG
Ga0137409_112931051	3300015245	Vadose Zone Soil	MTVWAWLKLTAALWLIRKAFRLTWWLLLAVAAIAAWPITVITAAGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVFPVGLALAGLVWAWRNYAITAGLGGK
Ga0163161_110976361	3300017792	Switchgrass Rhizosphere	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAPWPVTIVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPA
Ga0187769_112006371	3300018086	Tropical Peatland	MSVWSWLKLTACLWLLRKAVKAVRWLLLAAAAVATWPVTLVVVTGYAVAWLRGWPPTRLYRAAAWALLVTAAWLFILEVRTPGWIATRTPGRAWARGWDHLAAADLARVFLLLAPVTIPAGLAVAGMVWAWRIYAITAGLGGMTASAPITFEARQWKRQVRTAKGLT
Ga0066669_121862352	3300018482	Grasslands Soil	VTVWSWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTVVTATGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPGRTWAGGWNHLTTARLANVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMA
Ga0173482_103396091	3300019361	Soil	VTVWAWLKLTAALWLIRKAFKLAWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGSWDHLATARLAGVFAALAPAD
Ga0193732_10845151	3300020012	Soil	VTVWTWLKLTACLWLIRKAFKLTWWLLLAVAAVAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPFTAAWLITLEIQVPWFLAARDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQW
Ga0210408_108234602	3300021178	Soil	VTVWAWLKFTFFLWLIRKAFKLAWWLLLAVATVATWPVTVVAGAGYLAAWLRGWPPVRLYRAAAWALPVTAAWLAYLEARVPGFLAARDPGRTWAGGWDQLTIAHLAGVFAALAPVTLPAGLALAGMVWAWRNYAVTAGL
Ga0193699_104732761	3300021363	Soil	MTVWAWLKLTACLWLIRKAFKLTWWLLLGVAAVAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPWFLAARDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLALAGLVWAWRNYAVTAGLGGKMASAPITF
Ga0247661_10068731	3300024254	Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKTA
Ga0247692_10365833	3300024279	Soil	VTVWAWLKLTAALWLIRKAFKLSWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTITRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAG
Ga0179589_105238581	3300024288	Vadose Zone Soil	VTVWAWVKLTACLWLIRKAFRLAWWLLLAVAAVAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTGRLAGVFAALAPAVFPVGLALAGLVWAWRNYAI
Ga0247666_10259221	3300024323	Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGTMASAPITFDTRQWNRQVRTAQG
Ga0207692_101220542	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTAVAAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLISLEIQVPGFLAARDPRRTWAGGWDHLTTTRLVGVFAALAPAVLPA
Ga0207642_107707262	3300025899	Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLG
Ga0207688_101447331	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPISF
Ga0207699_101166061	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLSWWLLLAVAAIAAWPVTMVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAI
Ga0207699_102414691	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPA
Ga0207645_102316133	3300025907	Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLATDRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPI
Ga0207684_112621151	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTACLWLIRKAFRLTWWLLLAVAAIAAWPVTVVTAAVYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPAGLLLAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQIRTAQGLTHAPG
Ga0207695_109494832	3300025913	Corn Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWALRNYAI
Ga0207671_106665291	3300025914	Corn Rhizosphere	VTVWVWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLAL
Ga0207693_102621291	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAAL
Ga0207693_108504233	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWVWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVL
Ga0207660_108816431	3300025917	Corn Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLAL
Ga0207662_100840171	3300025918	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPI
Ga0207646_110645602	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTACLWLIRKAFRLTWWLLLAVAAIAAWPVTVVTAAVYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASA
Ga0207694_102997443	3300025924	Corn Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGL
Ga0207700_109541121	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPA
Ga0207686_115649481	3300025934	Miscanthus Rhizosphere	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTIVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWA
Ga0207704_108727641	3300025938	Miscanthus Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVW
Ga0207711_101873671	3300025941	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAIKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAG
Ga0207651_107718961	3300025960	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLSWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPISFDARQWNRQVRT
Ga0207668_104091363	3300025972	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNFAITAG
Ga0207639_118343801	3300026041	Corn Rhizosphere	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTIVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLATDRLAGVFAALAPAVLPA
Ga0207702_116167601	3300026078	Corn Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPISFDARQW
Ga0208986_10017064	3300027031	Forest Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMA
Ga0209178_10889891	3300027725	Agricultural Soil	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTAVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLISLEIQVPGFLAARDPRRTWAGGWDHLTTTRLVGV
Ga0268266_108850061	3300028379	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTVAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAG
Ga0268266_116716341	3300028379	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLAL
Ga0268266_120619272	3300028379	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMA
Ga0268264_104332211	3300028381	Switchgrass Rhizosphere	VTVWAWLKLTAALWLIRKAFKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLG
Ga0307284_104981311	3300028799	Soil	TVWAWLKLTACLWLIRKAFKLTWWLLLAVAAVAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPFTAAWLITLEIQVPWFLAARDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQVRTAQGLT
Ga0307310_104805451	3300028824	Soil	MTVWAWLKLTACLWLIRKAFKLTWWLLLAVAAVAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPFTAAWLITLEIQVPWFLAARDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLALAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQVRTAQGLT
Ga0307289_102730582	3300028875	Soil	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALA
Ga0307496_101313872	3300031200	Soil	VTVWAWLKLTACLWLIRKAFRLTWWLLLAVAAVAAWPVTVVTAAGYTVAWLRGWPPVRLYRAAAWSLPITAAWLVTLEIQVPSFLAARDPRRTWAGGWDHLTTARLAGVFAALAPAVLPAGLAL
Ga0307468_1023486161	3300031740	Hardwood Forest Soil	VTVWAWLKLTACLWLIRKAFRLAWWLLLVVAAIAVWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVFPVGLALAGLVW
Ga0318565_103781151	3300031799	Soil	VTVWAWLKLTACLWLLRKAVRLFWWLLLAIAAVAAWPVTMVTVAGYAAAWLRGWPPVRLYRAATCALLVTAAWLTTLEIRLPGWLATRAPDRAWTGSWDHVTTAHLARTFAALAPVAV
Ga0307473_109103191	3300031820	Hardwood Forest Soil	MTVRAWLKLTAALWLIRKAFRLAWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLTGVFAALAPAVLPAGLLLAGLV
Ga0307470_103566453	3300032174	Hardwood Forest Soil	MTVWAWLKLTAALWLIRKAFRLAWWLLLVVAAIAVWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPAVLPVGLVLAGLVWAWRNYAITAGLGGKMASAPITFDARQWNRQVRTAQG
Ga0307471_1018324772	3300032180	Hardwood Forest Soil	VTVWAWLKLTACLWLIRKAFRLAWWLLLAVAAIAAWPVTVVAAAGYVAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTDRLAGVFAALAPVVLPA
Ga0335072_105447412	3300032898	Soil	VTVWTWLKLTACLWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLIYLEIQVPGFLAARDPRRTWAGGWDHLTTTRLVGVFAALAPAVLPAGLALAGLVWAWRNYAITA
Ga0335084_107483721	3300033004	Soil	VTVWAWLKLTAALWLIRKAFKLAWWLLLTVAAIAAWPVTVVTAAGYITAWLRGWPPVRLYRAAAWSLPVTAAWLITLEIQVPGFLASRDPGRTWAGGWDHLTTNRLAGVFAALAPAVLPAGLVLAGLVWAWRNFAINAGLGGTMASAPITFDARQWGRQ
Ga0335073_103512342	3300033134	Soil	VTVWTWLKLTACLWLIRKAFKLTWWLLLAVAAIAAWPVTVVTAAGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLIYLEIQVPGFLAARDPRRTWAGGWDHLTTTRLVGVFAALAPAVLPAGLALAGLVWAWRN
Ga0373959_0023152_850_1206	3300034820	Rhizosphere Soil	VTVWAWLKLTAALWLIRKAIKLTWWLLLAVAAIAAWPVTVVTATGYTAAWLRGWPPVRLYRAAAWSLPVTAAWLVYLEIRVPGFLAARDPRRTWAGGWDHLTTTRLAGVFAALAPAVLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences