Metagenome / Metatranscriptome Family F089249

Basic Information
Family ID	F089249
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	88 residues
Representative Sequence	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Number of Associated Samples	108
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.98 %
% of genes near scaffold ends (potentially truncated)	36.70 %
% of genes from short scaffolds (< 2000 bps)	81.65 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (52.294 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.266 % of family members)
Environment Ontology (ENVO)	Unclassified (42.202 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.963 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.78% β-sheet: 0.00% Coil/Unstructured: 42.22%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07883	Cupin_2	16.51
PF13397	RbpA	1.83
PF13700	DUF4158	1.83
PF05598	DUF772	1.83
PF00106	adh_short	0.92
PF16525	MHB	0.92
PF00011	HSP20	0.92
PF01609	DDE_Tnp_1	0.92
PF00355	Rieske	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.92
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.92
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.92
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.92
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.92
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	40.37 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	37.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.92 %
Mycobacterium avium complex (MAC)	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC)	0.92 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.75 %
Mycobacterium avium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium	0.92 %
Mycobacterium sp. SM1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. SM1	0.92 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_176995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2370	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0691721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	839	Open in IMG/M
3300001593\|JGI12635J15846_10273518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1071	Open in IMG/M
3300001661\|JGI12053J15887_10078689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1818	Open in IMG/M
3300002067\|JGI24735J21928_10231594	Not Available	537	Open in IMG/M
3300002075\|JGI24738J21930_10138877	Not Available	535	Open in IMG/M
3300002245\|JGIcombinedJ26739_100301733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. SM1	1486	Open in IMG/M
3300004114\|Ga0062593_101147248	Not Available	811	Open in IMG/M
3300004152\|Ga0062386_100683943	Not Available	841	Open in IMG/M
3300004157\|Ga0062590_101507655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	675	Open in IMG/M
3300004643\|Ga0062591_100174829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1538	Open in IMG/M
3300005331\|Ga0070670_101197935	Not Available	694	Open in IMG/M
3300005333\|Ga0070677_10071732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1459	Open in IMG/M
3300005334\|Ga0068869_100183041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1643	Open in IMG/M
3300005337\|Ga0070682_100345458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1107	Open in IMG/M
3300005338\|Ga0068868_101061917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	743	Open in IMG/M
3300005366\|Ga0070659_100117995	Not Available	2146	Open in IMG/M
3300005367\|Ga0070667_100517792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1094	Open in IMG/M
3300005435\|Ga0070714_101113312	Not Available	770	Open in IMG/M
3300005437\|Ga0070710_10068224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2042	Open in IMG/M
3300005444\|Ga0070694_100222101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1417	Open in IMG/M
3300005455\|Ga0070663_100118358	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300005457\|Ga0070662_100466039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1050	Open in IMG/M
3300005536\|Ga0070697_100276289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium avium complex (MAC) → Mycobacterium avium	1440	Open in IMG/M
3300005577\|Ga0068857_100877802	Not Available	859	Open in IMG/M
3300005615\|Ga0070702_100245614	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300006175\|Ga0070712_101133299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	679	Open in IMG/M
3300006358\|Ga0068871_102021126	Not Available	549	Open in IMG/M
3300007258\|Ga0099793_10096948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1360	Open in IMG/M
3300009093\|Ga0105240_10177722	Not Available	2515	Open in IMG/M
3300009101\|Ga0105247_10304421	Not Available	1107	Open in IMG/M
3300010154\|Ga0127503_10263303	Not Available	684	Open in IMG/M
3300010375\|Ga0105239_11307963	Not Available	836	Open in IMG/M
3300011119\|Ga0105246_10089189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2218	Open in IMG/M
3300012203\|Ga0137399_10143430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1900	Open in IMG/M
3300012212\|Ga0150985_106852037	Not Available	764	Open in IMG/M
3300012361\|Ga0137360_10862225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	780	Open in IMG/M
3300012685\|Ga0137397_10164261	Not Available	1647	Open in IMG/M
3300012891\|Ga0157305_10245079	Not Available	536	Open in IMG/M
3300012899\|Ga0157299_10038453	Not Available	1016	Open in IMG/M
3300012911\|Ga0157301_10053062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1053	Open in IMG/M
3300012913\|Ga0157298_10093257	Not Available	799	Open in IMG/M
3300012914\|Ga0157297_10294378	Not Available	608	Open in IMG/M
3300012922\|Ga0137394_10548525	Not Available	980	Open in IMG/M
3300012925\|Ga0137419_10089670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2101	Open in IMG/M
3300012929\|Ga0137404_10913871	Not Available	801	Open in IMG/M
3300012944\|Ga0137410_10415724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	1086	Open in IMG/M
3300012951\|Ga0164300_10048275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1669	Open in IMG/M
3300012958\|Ga0164299_11641612	Not Available	508	Open in IMG/M
3300012960\|Ga0164301_10390379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	971	Open in IMG/M
3300012961\|Ga0164302_10097800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1613	Open in IMG/M
3300012984\|Ga0164309_11255083	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012984\|Ga0164309_11528126	Not Available	571	Open in IMG/M
3300012987\|Ga0164307_10986992	Not Available	684	Open in IMG/M
3300013100\|Ga0157373_10100223	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300013102\|Ga0157371_10166927	Not Available	1572	Open in IMG/M
3300013306\|Ga0163162_11131999	Not Available	887	Open in IMG/M
3300014745\|Ga0157377_10054819	Not Available	2258	Open in IMG/M
3300014969\|Ga0157376_12499283	Not Available	556	Open in IMG/M
3300015077\|Ga0173483_10011485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3032	Open in IMG/M
3300015200\|Ga0173480_10108036	Not Available	1362	Open in IMG/M
3300015241\|Ga0137418_10038960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4387	Open in IMG/M
3300015374\|Ga0132255_100745756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1457	Open in IMG/M
3300017792\|Ga0163161_11656177	Not Available	566	Open in IMG/M
3300018465\|Ga0190269_10021638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2895	Open in IMG/M
3300018466\|Ga0190268_10055280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1603	Open in IMG/M
3300019356\|Ga0173481_10033926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1660	Open in IMG/M
3300019362\|Ga0173479_10037543	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300020140\|Ga0179590_1065922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	950	Open in IMG/M
3300020199\|Ga0179592_10034867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2275	Open in IMG/M
3300020580\|Ga0210403_10455311	Not Available	1042	Open in IMG/M
3300020581\|Ga0210399_10734966	Not Available	810	Open in IMG/M
3300021170\|Ga0210400_10650985	Not Available	868	Open in IMG/M
3300021401\|Ga0210393_10416246	Not Available	1096	Open in IMG/M
3300021478\|Ga0210402_10395386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1283	Open in IMG/M
3300021479\|Ga0210410_11743189	Not Available	517	Open in IMG/M
3300024347\|Ga0179591_1021484	All Organisms → cellular organisms → Bacteria	4363	Open in IMG/M
3300025321\|Ga0207656_10124117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1205	Open in IMG/M
3300025898\|Ga0207692_10076098	Not Available	1782	Open in IMG/M
3300025900\|Ga0207710_10115896	Not Available	1276	Open in IMG/M
3300025901\|Ga0207688_10010654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	5001	Open in IMG/M
3300025904\|Ga0207647_10014233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5489	Open in IMG/M
3300025906\|Ga0207699_10488881	Not Available	887	Open in IMG/M
3300025907\|Ga0207645_10029745	Not Available	3521	Open in IMG/M
3300025912\|Ga0207707_10247258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1550	Open in IMG/M
3300025960\|Ga0207651_10521398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1030	Open in IMG/M
3300025986\|Ga0207658_12106897	Not Available	512	Open in IMG/M
3300026041\|Ga0207639_10232592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1598	Open in IMG/M
3300026116\|Ga0207674_11543392	Not Available	633	Open in IMG/M
3300026121\|Ga0207683_11648700	Not Available	591	Open in IMG/M
3300026555\|Ga0179593_1254387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2351	Open in IMG/M
3300027388\|Ga0208995_1068420	Not Available	623	Open in IMG/M
3300027521\|Ga0209524_1049235	Not Available	889	Open in IMG/M
3300027605\|Ga0209329_1009631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1814	Open in IMG/M
3300027645\|Ga0209117_1200687	Not Available	503	Open in IMG/M
3300027651\|Ga0209217_1048891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1280	Open in IMG/M
3300027903\|Ga0209488_10032928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3779	Open in IMG/M
3300028536\|Ga0137415_10055885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3815	Open in IMG/M
3300028596\|Ga0247821_10681870	Not Available	669	Open in IMG/M
3300028814\|Ga0307302_10295844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	796	Open in IMG/M
3300028819\|Ga0307296_10316896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300031170\|Ga0307498_10135606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	801	Open in IMG/M
3300031547\|Ga0310887_10878331	Not Available	567	Open in IMG/M
3300031740\|Ga0307468_100019371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2958	Open in IMG/M
3300031854\|Ga0310904_11052456	Not Available	581	Open in IMG/M
3300032000\|Ga0310903_10048587	Not Available	1619	Open in IMG/M
3300032205\|Ga0307472_102030979	Not Available	576	Open in IMG/M
3300032211\|Ga0310896_10532454	Not Available	648	Open in IMG/M
3300034817\|Ga0373948_0103589	Not Available	673	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.89%
Host-Associated	Host-Associated	32.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.05%
Plants	Host-Associated → Plants	32.11%
Aquatic	Environmental → Aquatic	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.76%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.54%
Loam	Environmental → Terrestrial → Soil → Loam	16.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.34%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.75%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1	Host-Associated	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03008270	2199352025	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
ICChiseqgaiiDRAFT_06917212	3300000033	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
JGI12635J15846_102735183	3300001593	Forest Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKLPDGTGGTPDFDTPLRDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
JGI12053J15887_100786894	3300001661	Forest Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLEDTLPASINPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
JGI24735J21928_102315942	3300002067	Corn Rhizosphere	QAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGXTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
JGI24738J21930_101388771	3300002075	Corn Rhizosphere	ETRAESAIKDYVDHVADIAKFPDAAGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
JGIcombinedJ26739_1003017332	3300002245	Forest Soil	MKKLAIRREHRINETQAESALKDYVDHVADIAKFPDETGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0062593_1011472482	3300004114	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0062386_1006839431	3300004152	Bog Forest Soil	MPATRTNTNYKSAQARKHRIDKTQAESAIKDYIDHVVDIAVFADETGTRDFDTPLGDTLPASITPETAAGLACNLRAALPRIRELRGLLTRRGKEDD*
Ga0062590_1015076551	3300004157	Soil	RSAREETSMKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0062591_1001748293	3300004643	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLL
Ga0070670_1011979353	3300005331	Switchgrass Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPNATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070677_100717321	3300005333	Miscanthus Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0068869_1001830412	3300005334	Miscanthus Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070682_1003454581	3300005337	Corn Rhizosphere	PAWLASRSAREETSMKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0068868_1010619173	3300005338	Miscanthus Rhizosphere	EHRINETQAESALKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070659_1001179951	3300005366	Corn Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070667_1005177921	3300005367	Switchgrass Rhizosphere	SMKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070714_1011133122	3300005435	Agricultural Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRR
Ga0070710_100682241	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	HRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070694_1002221011	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAAL
Ga0070663_1001183583	3300005455	Corn Rhizosphere	MKKLAIRRAHRINETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070662_1004660393	3300005457	Corn Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDAAGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0070697_1002762893	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0068857_1008778022	3300005577	Corn Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFADGMGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTKRGKEDG*
Ga0070702_1002456143	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALP
Ga0070712_1011332992	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPAGIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0068871_1020211262	3300006358	Miscanthus Rhizosphere	RAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0099793_100969483	3300007258	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLEDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0105240_101777222	3300009093	Corn Rhizosphere	MKKLAIRREYRINETRAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0105247_103044213	3300009101	Switchgrass Rhizosphere	MKKLAIRREYRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0127503_102633031	3300010154	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGPASNLRAALPRIRELLGLLTRRGKEDG*
Ga0105239_113079632	3300010375	Corn Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKE
Ga0105246_100891891	3300011119	Miscanthus Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPAGIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0137399_101434304	3300012203	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTADFDTPLEDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0150985_1068520372	3300012212	Avena Fatua Rhizosphere	MKKLAILRENRINETRAESAIKDYVDHVADIAKFPDATAGPPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0137360_108622251	3300012361	Vadose Zone Soil	RREHRINETQAESALKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0137397_101642612	3300012685	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRLRELLGLLTRRGKEDG*
Ga0157305_102450791	3300012891	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDAAGGTPDFDTPLGDTLPASIDPETAAGLASNLRSALPRIRELLGLLTRRGKED
Ga0157299_100384531	3300012899	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPGTAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0157301_100530622	3300012911	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPGTAAGLASNLRAALPRIRELLGLLTKRG
Ga0157298_100932571	3300012913	Soil	MKKLAIRREHRINATQAESAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0157297_102943781	3300012914	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPGTAAGLASNLRAALPRIRELLGLLTKRGKEDG*
Ga0137394_105485253	3300012922	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGMGNTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0137419_100896703	3300012925	Vadose Zone Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLEDTLPASINPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0137404_109138711	3300012929	Vadose Zone Soil	MKKLAIRREHRINETRAESAIKDYVDHVGDIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRLRELLGLLTRRGKEDG*
Ga0137410_104157242	3300012944	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADTAKFPDGTGGTPDFDTPLEDTLPASINPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0164300_100482754	3300012951	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLPAGIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0164299_116416122	3300012958	Soil	MSYETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0164301_103903793	3300012960	Soil	REHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0164302_100978001	3300012961	Soil	AIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0164309_112550832	3300012984	Soil	AIRREHRINETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0164309_115281261	3300012984	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0164307_109869921	3300012987	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLPAGIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0157373_101002234	3300013100	Corn Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTKRGKEDG*
Ga0157371_101669273	3300013102	Corn Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTGGIPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0163162_111319991	3300013306	Switchgrass Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIREL
Ga0157377_100548193	3300014745	Miscanthus Rhizosphere	MKKLAIRREHRINETRADSAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLAASIDRETAAGLSSNLRAALPRIRELLGLLTRRGKEDG*
Ga0157376_124992832	3300014969	Miscanthus Rhizosphere	AESAIKDYVDHVADIAKSPDAAGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0173483_100114854	3300015077	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTKRGKEDG*
Ga0173480_101080362	3300015200	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTKRGKEDG*
Ga0137418_100389603	3300015241	Vadose Zone Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTGGTADFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0132255_1007457562	3300015374	Arabidopsis Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPAGIDAETAAGLASNLRAALPRIRELLGLLTRRGKEDG*
Ga0163161_116561771	3300017792	Switchgrass Rhizosphere	AWLASRSAREETSMKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0190269_100216381	3300018465	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGRTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0190268_100552801	3300018466	Soil	MKKLAIRREHRINEIQAESAIKDYVDHVADIAKFPDATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0173481_100339263	3300019356	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0173479_100375433	3300019362	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGK
Ga0179590_10659222	3300020140	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGMGNTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0179592_100348672	3300020199	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLEDTLPASINPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0210403_104553111	3300020580	Soil	MKKLAIRREHRINETRADSAIKDYVDHVADIAKFPDATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0210399_107349661	3300020581	Soil	MKKLAIRREHRINETQAESAIKDYVDHLADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0210400_106509851	3300021170	Soil	MKKLAIRREHRINETRADSAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0210393_104162462	3300021401	Soil	MKKLAIRREHRINETQAESALKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0210402_103953862	3300021478	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLPAGIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0210410_117431891	3300021479	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELL
Ga0179591_102148411	3300024347	Vadose Zone Soil	MKKLAIRREHRINETQAESALKDYVDHVAGIAKFPDATGGTPDFDTPLGDSLPASIDPETAAGLASNLRAALPRIRELLGLLTKRGKEDG
Ga0207656_101241171	3300025321	Corn Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPAGIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207692_100760983	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPNATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLG
Ga0207710_101158962	3300025900	Switchgrass Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGL
Ga0207688_100106544	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDAAGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207647_1001423310	3300025904	Corn Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPNATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207699_104888811	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDETGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIREL
Ga0207645_100297453	3300025907	Miscanthus Rhizosphere	MKKLAIRREHRIDETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207707_102472583	3300025912	Corn Rhizosphere	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207651_105213983	3300025960	Switchgrass Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHMADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207658_121068971	3300025986	Switchgrass Rhizosphere	EEASMKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207639_102325923	3300026041	Corn Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0207674_115433922	3300026116	Corn Rhizosphere	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTKRGKEDG
Ga0207683_116487001	3300026121	Miscanthus Rhizosphere	EETSMKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0179593_12543875	3300026555	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRR
Ga0208995_10684202	3300027388	Forest Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGVTPDFDTPLGGTLPASINPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0209524_10492353	3300027521	Forest Soil	MKKLAIRREHRINETQAESALKDYVDHVADIAKFPAGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0209329_10096312	3300027605	Forest Soil	MKKLAIRREHRINETQAESALKDYVDHVADIAKFPDGTGGTPDFDTPLGDPLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0209117_12006872	3300027645	Forest Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKLPDGTGGTPDFDTPLRDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0209217_10488911	3300027651	Forest Soil	MKKLAIRREHRINETQAESALKDYVDHVADIAKFPDETGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0209488_100329281	3300027903	Vadose Zone Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLEDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0137415_100558856	3300028536	Vadose Zone Soil	LASRSAREETSMKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLEDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0247821_106818702	3300028596	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0307302_102958441	3300028814	Soil	KLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFNTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0307296_103168962	3300028819	Soil	MKKLAIRREHRINETQAESAIKDYVDHLADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0307498_101356062	3300031170	Soil	MKKLAIRREHRINETPAESAIKDYVDHVADIAKFPDATAGTPDFDTPLGDTLPAGIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0310887_108783312	3300031547	Soil	IRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0307468_1000193713	3300031740	Hardwood Forest Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPNATAGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0310904_110524561	3300031854	Soil	RRDHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0310903_100485873	3300032000	Soil	MKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIREL
Ga0307472_1020309791	3300032205	Hardwood Forest Soil	SAREETSMKKLAIRREHRINETQAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRELLGLLTRRGKEDG
Ga0310896_105324541	3300032211	Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPNATGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRIRE
Ga0373948_0103589_449_673	3300034817	Rhizosphere Soil	MKKLAIRREHRINETRAESAIKDYVDHVADIAKFPDGTGGTPDFDTPLGDTLPASIDPETAAGLASNLRAALPRI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089249

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign