Metagenome Family F089236

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F089236
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	68 residues
Representative Sequence	MGWIIAIVALSLVMTVMTIAELRRPVRASTVQLPELTLADRLIALFVLGTFTVAIANGLILVAAKGLP
Number of Associated Samples	61
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.15 %
% of genes near scaffold ends (potentially truncated)	27.52 %
% of genes from short scaffolds (< 2000 bps)	88.07 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (77.982 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.183 % of family members)
Environment Ontology (ENVO)	Unclassified (37.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.633 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.38% β-sheet: 0.00% Coil/Unstructured: 40.63%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF09926	DUF2158	6.42
PF01068	DNA_ligase_A_M	2.75
PF00589	Phage_integrase	2.75
PF00072	Response_reg	1.83
PF01042	Ribonuc_L-PSP	1.83
PF03960	ArsC	0.92
PF00486	Trans_reg_C	0.92
PF13565	HTH_32	0.92
PF07045	DUF1330	0.92
PF12849	PBP_like_2	0.92
PF05598	DUF772	0.92
PF00216	Bac_DNA_binding	0.92
PF05226	CHASE2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.75
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.75
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.83
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.92
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	0.92
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.92
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
All Organisms	root	All Organisms	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
cellular organisms	root	All Organisms → cellular organisms	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.92 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.34 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	2.75 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.92 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2.75 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.92 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.92 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.92 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.92 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	2.75 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Methylocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella	0.92 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.92 %
Thiocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis	0.92 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.92 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	2.75 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.92 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.92 %
Thiocystis violascens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens	0.92 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.92 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Caulobacter sp. RHG1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. RHG1	2.75 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.92 %
Thiocystis violascens DSM 198	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens → Thiocystis violascens DSM 198	0.92 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.92 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.92 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	77.98 %
Caulobacter sp. RHG1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. RHG1	2.75 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.92 %
Thiocystis violascens DSM 198	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens → Thiocystis violascens DSM 198	0.92 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.92 %
Methylocella tundrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	0.92 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10037933	Not Available	2689	Open in IMG/M
3300005167\|Ga0066672_10053719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens → Thiocystis violascens DSM 198	2320	Open in IMG/M
3300005177\|Ga0066690_10126924	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300005181\|Ga0066678_10953954	Not Available	558	Open in IMG/M
3300005332\|Ga0066388_100592208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	1733	Open in IMG/M
3300005332\|Ga0066388_102109936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	1014	Open in IMG/M
3300005332\|Ga0066388_102344523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. RHG1	967	Open in IMG/M
3300005332\|Ga0066388_103035242	Not Available	858	Open in IMG/M
3300005332\|Ga0066388_103836276	Not Available	767	Open in IMG/M
3300005434\|Ga0070709_10811417	Not Available	735	Open in IMG/M
3300005435\|Ga0070714_100024563	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	4965	Open in IMG/M
3300005435\|Ga0070714_100368386	Not Available	1352	Open in IMG/M
3300005435\|Ga0070714_100648708	Not Available	1016	Open in IMG/M
3300005554\|Ga0066661_10144472	Not Available	1452	Open in IMG/M
3300005554\|Ga0066661_10725725	Not Available	582	Open in IMG/M
3300005559\|Ga0066700_10720100	Not Available	682	Open in IMG/M
3300005561\|Ga0066699_11286890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	501	Open in IMG/M
3300005586\|Ga0066691_10173382	Not Available	1248	Open in IMG/M
3300005614\|Ga0068856_100861330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	925	Open in IMG/M
3300005614\|Ga0068856_101033357	Not Available	840	Open in IMG/M
3300005764\|Ga0066903_100086931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4125	Open in IMG/M
3300005764\|Ga0066903_100257047	Not Available	2704	Open in IMG/M
3300005764\|Ga0066903_100442785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. RHG1	2166	Open in IMG/M
3300005764\|Ga0066903_100572014	Not Available	1947	Open in IMG/M
3300005764\|Ga0066903_100659291	Not Available	1832	Open in IMG/M
3300005764\|Ga0066903_100692143	Not Available	1794	Open in IMG/M
3300005764\|Ga0066903_101133624	Not Available	1445	Open in IMG/M
3300005764\|Ga0066903_101276343	Not Available	1370	Open in IMG/M
3300005764\|Ga0066903_101382156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	1321	Open in IMG/M
3300005764\|Ga0066903_103190517	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300005764\|Ga0066903_103551935	Not Available	840	Open in IMG/M
3300005764\|Ga0066903_104182760	Not Available	772	Open in IMG/M
3300005764\|Ga0066903_104225259	Not Available	768	Open in IMG/M
3300005764\|Ga0066903_105907900	Not Available	642	Open in IMG/M
3300006175\|Ga0070712_101693809	Not Available	553	Open in IMG/M
3300010043\|Ga0126380_11399070	Not Available	614	Open in IMG/M
3300010048\|Ga0126373_10676079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300010048\|Ga0126373_11388370	Not Available	768	Open in IMG/M
3300010358\|Ga0126370_11647681	Not Available	615	Open in IMG/M
3300010359\|Ga0126376_10444243	Not Available	1183	Open in IMG/M
3300010359\|Ga0126376_11268819	Not Available	755	Open in IMG/M
3300010361\|Ga0126378_12995478	Not Available	538	Open in IMG/M
3300010366\|Ga0126379_11495546	Not Available	781	Open in IMG/M
3300010366\|Ga0126379_12400907	Not Available	627	Open in IMG/M
3300010366\|Ga0126379_12581553	Not Available	606	Open in IMG/M
3300010366\|Ga0126379_13492305	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_13882895	Not Available	500	Open in IMG/M
3300010398\|Ga0126383_13083024	Not Available	544	Open in IMG/M
3300012199\|Ga0137383_10050883	All Organisms → cellular organisms → Bacteria → Proteobacteria	2961	Open in IMG/M
3300012199\|Ga0137383_10737542	Not Available	719	Open in IMG/M
3300012200\|Ga0137382_11270121	Not Available	521	Open in IMG/M
3300012201\|Ga0137365_10566043	Not Available	834	Open in IMG/M
3300012206\|Ga0137380_10208146	Not Available	1772	Open in IMG/M
3300012210\|Ga0137378_11327311	Not Available	635	Open in IMG/M
3300012211\|Ga0137377_10028436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5037	Open in IMG/M
3300012211\|Ga0137377_10116916	Not Available	2539	Open in IMG/M
3300012211\|Ga0137377_11272019	Not Available	666	Open in IMG/M
3300012349\|Ga0137387_10984072	Not Available	606	Open in IMG/M
3300012971\|Ga0126369_11222639	Not Available	841	Open in IMG/M
3300012971\|Ga0126369_11720533	Not Available	716	Open in IMG/M
3300012971\|Ga0126369_13700378	Not Available	501	Open in IMG/M
3300016319\|Ga0182033_11537657	Not Available	601	Open in IMG/M
3300016341\|Ga0182035_10207278	Not Available	1555	Open in IMG/M
3300016341\|Ga0182035_11759246	Not Available	561	Open in IMG/M
3300018468\|Ga0066662_10532228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300021476\|Ga0187846_10042257	All Organisms → cellular organisms → Bacteria → Proteobacteria	2035	Open in IMG/M
3300021560\|Ga0126371_11092613	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300021560\|Ga0126371_11440174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocella → Methylocella tundrae	819	Open in IMG/M
3300021560\|Ga0126371_11703332	Not Available	754	Open in IMG/M
3300021560\|Ga0126371_11902486	Not Available	714	Open in IMG/M
3300021560\|Ga0126371_12948000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. RHG1	576	Open in IMG/M
3300021560\|Ga0126371_13339957	Not Available	542	Open in IMG/M
3300025929\|Ga0207664_10325317	Not Available	1357	Open in IMG/M
3300025929\|Ga0207664_11106713	Not Available	708	Open in IMG/M
3300026078\|Ga0207702_10790667	Not Available	938	Open in IMG/M
3300026309\|Ga0209055_1055321	Not Available	1697	Open in IMG/M
3300026317\|Ga0209154_1041532	Not Available	2077	Open in IMG/M
3300026325\|Ga0209152_10171437	Not Available	816	Open in IMG/M
3300026552\|Ga0209577_10733808	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031546\|Ga0318538_10084675	Not Available	1615	Open in IMG/M
3300031564\|Ga0318573_10328540	Not Available	820	Open in IMG/M
3300031573\|Ga0310915_10135424	Not Available	1694	Open in IMG/M
3300031573\|Ga0310915_10180598	Not Available	1470	Open in IMG/M
3300031573\|Ga0310915_10846678	Not Available	642	Open in IMG/M
3300031573\|Ga0310915_10866742	Not Available	634	Open in IMG/M
3300031573\|Ga0310915_10979909	Not Available	590	Open in IMG/M
3300031679\|Ga0318561_10639831	Not Available	585	Open in IMG/M
3300031682\|Ga0318560_10310115	Not Available	851	Open in IMG/M
3300031716\|Ga0310813_11111546	Not Available	725	Open in IMG/M
3300031719\|Ga0306917_11031679	Not Available	642	Open in IMG/M
3300031744\|Ga0306918_10353051	Not Available	1141	Open in IMG/M
3300031771\|Ga0318546_10189021	Not Available	1403	Open in IMG/M
3300031771\|Ga0318546_11039860	Not Available	576	Open in IMG/M
3300031781\|Ga0318547_10498616	Not Available	752	Open in IMG/M
3300031793\|Ga0318548_10379495	Not Available	693	Open in IMG/M
3300031805\|Ga0318497_10470793	Not Available	704	Open in IMG/M
3300031833\|Ga0310917_10859226	Not Available	611	Open in IMG/M
3300031879\|Ga0306919_11086090	Not Available	610	Open in IMG/M
3300031912\|Ga0306921_10117082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3102	Open in IMG/M
3300031912\|Ga0306921_12386270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300031942\|Ga0310916_10076626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2632	Open in IMG/M
3300031942\|Ga0310916_11624062	Not Available	524	Open in IMG/M
3300031947\|Ga0310909_10796180	Not Available	781	Open in IMG/M
3300031954\|Ga0306926_10423763	Not Available	1641	Open in IMG/M
3300032001\|Ga0306922_10714034	Not Available	1054	Open in IMG/M
3300032059\|Ga0318533_10825426	Not Available	680	Open in IMG/M
3300032059\|Ga0318533_11023623	Not Available	605	Open in IMG/M
3300032064\|Ga0318510_10480770	Not Available	536	Open in IMG/M
3300033289\|Ga0310914_11027453	Not Available	725	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.25%
Plants	Host-Associated → Plants	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.75%
Cave	Environmental → Terrestrial → Cave	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.48%
Loam	Environmental → Terrestrial → Soil → Loam	23.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_100379332	3300005167	Soil	MGWIIAIVTLSVVMAVMTVAELRRPVSASAVQLPELTLADRVITVFVLGTFTLAIVNGLILVAMKALP*
Ga0066672_100537191	3300005167	Soil	MGWIVAILALSLVMAVMTVAELRRPVSTSTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKALP*
Ga0066690_101269241	3300005177	Soil	MGWILVIVALSLVMTVLTIRELRRPVSATKDRIPNLTIADCVIAVFVLGTFTLAIVNGLILVAVKTLP*
Ga0066678_109539542	3300005181	Soil	MGWIVAIVTLSVVMAVMTVAELRRPVSGSTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKALP*
Ga0066388_1005922081	3300005332	Tropical Forest Soil	GRTVMGWIIAIVALSLIMAVMTIAELRRPVSVSTVQLPELTWADRVINLFVLGTFTVAIANGLILVAAKGLP*
Ga0066388_1021099361	3300005332	Tropical Forest Soil	MGWTIAIVALSLVMTVMTVAELRRPASTNRVQLPELTAADRVITLFVLGTFTLAIVNGLVLVAAKTLP*
Ga0066388_1023445232	3300005332	Tropical Forest Soil	MGWIIAIVALSLVMAVMTIAEFRRPVAASTVQLPELTLADRVIGLFVLGSFTVAIANGLLLLAAKGLPY*
Ga0066388_1030352421	3300005332	Tropical Forest Soil	MGWIVAIVALSLVMTVMTVAELRPRPVKASTVQLPELTSADRAIAVFVLAMFTLAIVNGLILV
Ga0066388_1038362762	3300005332	Tropical Forest Soil	MEWIIAIVAPSLVMTVLIIAELWRPVRASTVQLPELTLADRAIALFVLGTFTLAIVNG
Ga0070709_108114171	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGWILAVVALSLVMTVMTLAELRKPVIANTIELPKLNLLHHAIALFALGTFIVAIINGLILVAAIAGSIPA*
Ga0070714_1000245636	3300005435	Agricultural Soil	MGWTIAIVALSLVMTVVTIAELRRPVSASTVQVPELTLADRLISLFVLGTFTLAIANGLILVAAKGLP*
Ga0070714_1003683863	3300005435	Agricultural Soil	MGWIIVIVALSLVMTVLTISELRRPVSATKAKIPNLTIADCVIALFVLGTFTFAIINGLILVAAKTLP*
Ga0070714_1006487082	3300005435	Agricultural Soil	MGWIIAIVALSLVMTVMTVAELRRPVSTSSVQLPELTIADRVITVFVLGSFTLAIVNGLFVVATKALP*
Ga0066661_101444722	3300005554	Soil	MGWIVAIVTLSVVMAVMTVAELRRPVSGSTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKGLP*
Ga0066661_107257252	3300005554	Soil	MGWIVAILALSLVMAVMTVAELRRPVSTSTVQLPELTLADRVITVFVLGTFTLAIVNGLI
Ga0066700_107201002	3300005559	Soil	MGWIVAILALSLVMAVMTVAELRRPVSTSTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKGLP*
Ga0066699_112868901	3300005561	Soil	LSLLGKFSGETVMGWIIAIVTLSVVMAVLTVAELRRPVSASAVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKALP*
Ga0066691_101733824	3300005586	Soil	MGWILVIVALSLVMTVLTIRELRRPVSATKDRIPNLTIADCVIAVFVLGTFTLAIVNALILVAVKTLP*
Ga0068856_1008613302	3300005614	Corn Rhizosphere	MGWLVAIVALSSVMVVLVIAELRKPVSASTIDLPALSLADRVIALFALGTFTLAIVNGLIVVAAKTLP*
Ga0068856_1010333572	3300005614	Corn Rhizosphere	MGWIVAVVALSLVMTVITIAELRRPVLGSTVQLPELTFADRAIALFALGMFTLAIVNGLILVGATLP*
Ga0066903_1000869312	3300005764	Tropical Forest Soil	MGWIIAIVALSLIMAVMTIAELRRPVSVSTVQLPELTWADRVISLFVLGTFTVAIANGLILVAAKGLP*
Ga0066903_1002570475	3300005764	Tropical Forest Soil	MGWIIAIVALSLVMTVMTIAELRRPVRASTVQLPELTLADRLIALFVLGTFTVAIANGLILVAAKGLP*
Ga0066903_1004427852	3300005764	Tropical Forest Soil	MGWIIAIVALSLVMAVMTIAEFRRPVAASTVQLPELTLADRVIGLFVLGSFTVAIANGLMLLAAKGLPY*
Ga0066903_1005720142	3300005764	Tropical Forest Soil	MAWIIAIVALSLVMAVLTIAELRGPVGVSTVQLPELTLVDQAITVFALGMFAIAIIDGLIMVAAKGLP*
Ga0066903_1006592914	3300005764	Tropical Forest Soil	MGWIVAIVALSLVMTVMTIAELRRPVRASTVQLPELALADRAISVFVLGTFTLAIANGLILVAAKGLP*
Ga0066903_1006921433	3300005764	Tropical Forest Soil	MGWIIAVVALSLVMTVMTIAEPRKPVIANTIELPKLNLVHHAIALFALGTFIIAIINGVILVAAIAGSIPA*
Ga0066903_1011336244	3300005764	Tropical Forest Soil	MGWIIAIVALSLAMAVLTIAELRRPVSVGTVQLPELTWADRVITLFVLGTFTVAIANGLILVAAKGLP*
Ga0066903_1012763431	3300005764	Tropical Forest Soil	MAWIIAIVALSLVMTVLTIAEFRRPVKASTVQLPEFTVADRAIAVFVVGTFTLAFVNGLLLVATKTLP*
Ga0066903_1013821562	3300005764	Tropical Forest Soil	MGWIIAIVALSLVMTVMTIAELRRPVRASTIQLPELTLADRLISLFVLGTFTLAIANGLILVAAKGLP*
Ga0066903_1031905171	3300005764	Tropical Forest Soil	MGWIIAIVALSVVMTVMTIAELRKPISASAIELPELTLADRAIALFALGTFTLAIANGLVLAAAKTLP*
Ga0066903_1035519351	3300005764	Tropical Forest Soil	MGWIIAIVALSLVMTVMTVAELRPRPVKASTVQLPELTSADRAIAVFVLARFTLAVANGLILMTAKTL
Ga0066903_1041827601	3300005764	Tropical Forest Soil	MGWIIAILAISSVMVVLTIAELRRPIAASTVQLPELTLADRLIGLFVLGTFTVAIANGLILVAAKGLP*
Ga0066903_1042252592	3300005764	Tropical Forest Soil	MGWIIAILALSVVMAVMAIAELRRPIAASTVQLPELTLADRAIGLFVLGTFTVAIANGLVLVAAKGLP*
Ga0066903_1059079003	3300005764	Tropical Forest Soil	MGWIIAIVALSLVMTVMTIAELRRPVRASTVELPELAIADRVIALFALGTFTLAIANGLIVVAAKALP*
Ga0070712_1016938091	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGWIIAIVALSLVMTVMTIAELRRPASTSAFQLPEFTVADRVITLFVLGTFTLAIVNGLILVAAKGLP*
Ga0126380_113990701	3300010043	Tropical Forest Soil	MGRTVMGWIIAIVALSLVMTVMTIAELRKPVAASTVELPELALADRVIALFALGTFAVAIANG
Ga0126373_106760791	3300010048	Tropical Forest Soil	MEWIIAIVAPSLVMTVLIIAELWRPVRASTVQLPELTLADRAIALFVVGTFTLAIVNGLVLIAAKTLP*
Ga0126373_113883701	3300010048	Tropical Forest Soil	MGWIIAILAISSVMVVLTIAELRRPIAASTVQLPELTLADRLIGLFVLGTFTVAIANGLVLVAAKGLP*
Ga0126370_116476812	3300010358	Tropical Forest Soil	MGWIIATVALSLVMTVMTVAELRKPVKASTVQLPELTSADRAIAVFVLAMFTLAIANGLILMTAKTLP*
Ga0126376_104442432	3300010359	Tropical Forest Soil	MEWIIAIVALSLVMTVLTVAELRRPVKASTIQLPELTLADRAIAVFALATFTLAIVNGLVLIAAKTLP*
Ga0126376_112688193	3300010359	Tropical Forest Soil	MRRTVMGWIIAIVALSLVMTVMTVAELRRPVRTSTVRLPELALADRTIALFALGMFTIAIVNGLIMVAAKTLP*
Ga0126378_129954781	3300010361	Tropical Forest Soil	IIAILAISSVMVVLTIAELRRPIAASTVQLPELTLADRLIGLFVLGTFTVAIANGLILVAAKGLP*
Ga0126379_114955461	3300010366	Tropical Forest Soil	MGWIIAIVALSLIMAVMTIAELRRPVAASTVQLPELTLADRVIGLFVLGSFTVAIANGLLLLAAKGLPY*
Ga0126379_124009071	3300010366	Tropical Forest Soil	MGWIIAIVALSLVMTVMTVAELRRPVRTSTVRLPELALADRTITLFALGMFTIAIVNGLIMVAAKTLP*
Ga0126379_125815531	3300010366	Tropical Forest Soil	MGWIIAVVALSMVMAVMTIAELRQPVRASTVQLPELTLADRVIGLFVLGTFTVAIANGLILVAVKGLP*
Ga0126379_134923052	3300010366	Tropical Forest Soil	FLGRTVMAWIIAIVALSLVMAVLTIAELRGPVGVSTVQLPELTLVDQAITVFALGMFAIAIIDGLIMVAAKGLP*
Ga0126379_138828951	3300010366	Tropical Forest Soil	MGWTIAIVALSLVMTVMTVAELRRPVSTNRVQLPELNVADRVITLFVLGTFTLAIVNGLVLVAAKTLP*
Ga0126383_130830242	3300010398	Tropical Forest Soil	MGWIIAIVALSLVMTVMTIVELRRPVRASAVQLSELALADRAISVFVLGTFTLAIANGLIVVAAKALP*
Ga0137383_100508833	3300012199	Vadose Zone Soil	MGWIVAILALSLVMAVMTVAELRRPVSTSTVQLPELTLADRVITVFMLGTFTLAIVNGLILVAAKALP*
Ga0137383_107375421	3300012199	Vadose Zone Soil	PDKFSGETVMGWIVAIVTLSVVMAVMTVAELRRPVSASTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKGLP*
Ga0137382_112701211	3300012200	Vadose Zone Soil	MFSGETVMGWIIAIVALSVVMAVMTVAALRHPVSASTVQLPELTWADRVITVFMLGTFTLAIVNGLILVAAQALP*
Ga0137365_105660431	3300012201	Vadose Zone Soil	MGWVIAIVALSLVMAVMTVAELRRPVRASTVQLPELTLADRVITVFMLGTFTLAIVNGLILVAAKALP*
Ga0137380_102081462	3300012206	Vadose Zone Soil	MGWIVAIVTLSVVMAVMTVAELRRPVSASTVQLPELTLADRVITVFVLGTFTLAIVNGLILIAAKALP*
Ga0137378_113273111	3300012210	Vadose Zone Soil	MFSGETVMGWIIAIVALSVVMAVMTVAELRHPVSASTVQLPELTWADRVITVFMLGTFTLAIVNGLILVAAQALP*
Ga0137377_100284369	3300012211	Vadose Zone Soil	AILALSLVMAVMTVAELRRPVSTSTVQLPELTLADRVITVFMLGTFTLAIVNGLILVAAKALP*
Ga0137377_101169162	3300012211	Vadose Zone Soil	MGWIVAIVTLSVVMAVMTVAELRRPVSASTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAQGLP*
Ga0137377_112720191	3300012211	Vadose Zone Soil	AILALSLVMAVMTVAELRRPVSTSTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKALP*
Ga0137387_109840721	3300012349	Vadose Zone Soil	MGWIVAIVTLSVVMAVMTVAELRRPVSGSTVQLPELTLADRVITVFVLGTFTLAIVNGLILIAAKALP*
Ga0126369_112226392	3300012971	Tropical Forest Soil	MGSIIAILALNLVITVLTIAALRRAVRVSTVQLPELAVADRAIVLFALGIFTLAMANGLMLVAAKGLP*
Ga0126369_117205331	3300012971	Tropical Forest Soil	MGWIIAIVALSLVITVMTVAELRRPVRTSTVRLPELALADRTIALFALGMFTIAIVNGLIMVAAKTLP*
Ga0126369_137003782	3300012971	Tropical Forest Soil	MGWIIAIVALSLVMTVMTVAELRPRPVKASTVQLPELTSADRAIAVFVLAMFTLAIANGLILMTAKTLP*
Ga0182033_115376571	3300016319	Soil	QFSGETVMGSIIAILALNLVITVLTIAALRRAVRVSTVQLPELAVADRAIVLFALGIFTLAIANGLMLVAAKGLP
Ga0182035_102072783	3300016341	Soil	ALLVARHFMETVMGWIIAIVALSLVMTVMTVAELQQPVRASTVQSPALTLADRLIALFALGTFTVAIANGLILVAAKGLP
Ga0182035_117592461	3300016341	Soil	GWIIAIVTLSFVMTVMTIAELRRPIAASTVALPELTLADRLIGLFVLSTFTVAIANGLILVAAKGLP
Ga0066662_105322281	3300018468	Grasslands Soil	MGWIIAIVTLSVVMAVMTVAELRRPVSASTVQLPELTLADRVITVFMLGTFTLAIVNGLILVAAKALP
Ga0187846_100422571	3300021476	Biofilm	MGWIIAIVALSSVMTVMTFAELRKPVRASTIDLPELAVADRVIAVFVLGTFSVAIINGLIMVAAKTLP
Ga0126371_110926131	3300021560	Tropical Forest Soil	MEWIIAIVAPSLVMTVLIIAELWRPVRASTVQLPELTLADRAIALFVVGTFTLAMVNGLVLIAAKTLP
Ga0126371_114401741	3300021560	Tropical Forest Soil	MGWIIAILALSSVMAVMTIAELRRPVSVTTVRIPELTIADRLIALFVLGTFTLAIANG
Ga0126371_117033321	3300021560	Tropical Forest Soil	ETVMGWIIAIVALSLVMTVLTIAEFRRPVKASTVQLPELAVFDRVLAVFVVGTFTLAIINGLVLVAAKTLP
Ga0126371_119024861	3300021560	Tropical Forest Soil	MGWIIAVVALSMVMAVMTIAELRQPVRASTVQLPELTLADRVIGLFVLGTFTVAIANGLILVAA
Ga0126371_129480002	3300021560	Tropical Forest Soil	LSLVMAVMTIAEFRRPVAASTVQLPELTLADRVIGLFVLGSFTVAIANGLLLLAAKGLPY
Ga0126371_133399572	3300021560	Tropical Forest Soil	VSRFTGETVMGWTVAIIALSLVMIVMTVAEFRRPVTASTVQSPELTLADRAIAVFVVGTFGLAIVNGLVLIAAKTLP
Ga0207664_103253171	3300025929	Agricultural Soil	MGWIIVIVALSLVMTVLTISELRRPVSATKAKIPNLTIADCVIALFVLGTFTFAIINGLILVAAKTLP
Ga0207664_111067131	3300025929	Agricultural Soil	MGWIIAILALSLVMAIMTIAEIRRPVRASTVELPELAVADRIIALFALGTFTLAIANGLIMVAAKGLP
Ga0207702_107906672	3300026078	Corn Rhizosphere	MGWLVAIVALSSVMVVLVIAELRKPVSASTIDLPALSLADRVIALFALGTFTLAIVNGLIVVAAKTLP
Ga0209055_10553214	3300026309	Soil	MGWIVAILALSLVMAVMTVAELRRPVSTSTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAAKALP
Ga0209154_10415321	3300026317	Soil	MGWIIAIVTLSVVMAVMTVAELRRPVSASAVQLPELTLADRVITVFVLGTFTLAIVNGLILVAMKALP
Ga0209152_101714371	3300026325	Soil	MFSGETVMGWIIAIVALSVVMAVMTVAELRHPVSASTVQLPELTLADRVITVFMLGTFTLAIVNGLILIAAKALP
Ga0209577_107338082	3300026552	Soil	MGWIVAIVTLSVVMAVMTVAELRRPVSASTVQLPELTLADRVITVFVLGTFTLAIVNGLILVAA
Ga0318538_100846752	3300031546	Soil	MGWIIAIVALSLVMAVMTIAELRRPVAASTVQLPELTLADRLIGLFVLGTFTVAIANGLILVAAKGMP
Ga0318573_103285401	3300031564	Soil	MGWIIAILAISSVMAVLTIAELRRPIAASTVQLPELTLADRLIGLFVLSTFTVAIANGLILVAAKGLP
Ga0310915_101354242	3300031573	Soil	MGSIIAILALNLVITVLTIAALRRAVRVSTVQLPELAVADRAIVLFALGIFTLAIANGLMLVAAKGLP
Ga0310915_101805982	3300031573	Soil	MGWIIAILALSSVMAVMTIAELRRPVAASTIELPALTIADRLIALFALGTFTVAIANGLILVAAKGLP
Ga0310915_108466781	3300031573	Soil	MGWIIAILAISSVMVVLTIAELRRPIAASTVQLPELTLADRLIGLFVLSTFTVAIANGLILVAAKGLP
Ga0310915_108667422	3300031573	Soil	MGWVIAIVAISSVMAVLTIAELRRPVAASTIELPALTIADRVIALFALGTFTLAIANGLI
Ga0310915_109799092	3300031573	Soil	GRTVMGWIIAIVTLSFVMTVMTIAELRRPIAASTVALPELTLADRLIGLFVLGTFMVAIANGLILVAAKGLP
Ga0318561_106398312	3300031679	Soil	FSGETVMGSIIAILALNLVITVLTIAALRRAVRVSTVQLPELAVADRAIVLFALGIFTLAIANGLMLVAAKGLP
Ga0318560_103101151	3300031682	Soil	GSIIAILALNLVITVLTIAALRRAVRVSTVQLPELAVADRAIVLFALGIFTLAIANGLMLVAAKGLP
Ga0310813_111115461	3300031716	Soil	MGWIIAVVALSLVMTVFTISELRRPLRTSTVQLPELAVADRIISLFSLGSFTLAIANGLILVAA
Ga0306917_110316792	3300031719	Soil	MGWIIAIVTLSFVMTVMTIAELRRPIAASTVALPELTLADRLIGLLVLGTFTVAIANGLMLVAAKGLP
Ga0306918_103530511	3300031744	Soil	MGWVIAIVAISSVMAVLTIAELRRPIAASTVQLPELTLADRLIGLFVLSTFTVAIANGLILVAAKGLP
Ga0318546_101890212	3300031771	Soil	MGWVVAIVAVTVVMAVMTIAELRRPVAASTVQLPELTLADRLIGLLVLGTFTVAIANGLMLVAAKGLP
Ga0318546_110398601	3300031771	Soil	MGWIIAMVALSLVMGVMTIAELRRPVAASTVQLPELTLADRVIGLFVLGTFSVAIANGLILVAAKGLP
Ga0318547_104986162	3300031781	Soil	MGWIIAIVALSVVMAVMTIAAVAASTIELPALTIADRLIALFAPGMFTAAIANGLI
Ga0318548_103794952	3300031793	Soil	MGWIIAIVTLSFVMTVMTIAELRRPIAASTVALPELTLADRLIGLFVLGTFMVAIANGLILVAAKGLP
Ga0318497_104707931	3300031805	Soil	LSPDQFSGETVMGSIIAILALNLVITVLTIAALRRAVRVSTVQLPELAVADRAIVLFALGIFTLAIANGLMLVAAKGLP
Ga0310917_108592262	3300031833	Soil	STGWIIAILALSSVMAVMTIAELRRPIRASTVQVPELTVADRVIGLFVLGTFTVAVANGLILVAAKGLP
Ga0306919_110860901	3300031879	Soil	MGWIIAIVALSVVMAVMTIAAVAASTIELPALTIADRLIALFAPGMFTAAIANGLILVAAKGLP
Ga0306921_101170821	3300031912	Soil	MGWVIAIVAISSVMAVLTIAELRRPVAASTIELPALTIADRVIALFALGTFTLAIANGLILVAAKGLPQPQRHD
Ga0306921_123862702	3300031912	Soil	MGWIIAIVALSLVMTVMTVAELQQPVRASTVQSPALTLADRLIALFALGTFTVAIANGLILVAAKGLP
Ga0310916_100766263	3300031942	Soil	MGWIIAILALSSVMAVMTIAELRRPIRASTVQVPELTVADRVIGLFVLGTFTVAVANGLILVAAKGLP
Ga0310916_116240621	3300031942	Soil	NSGISLVARYVLGEGGQMGWIIAIVALSLVMAVMTIAELRRPVAASTVQLPELTLADRLIGLFVLGTFTVAIANGLILVAAKGMP
Ga0310909_107961801	3300031947	Soil	MGWIIAILAISSVMVVLTIAELRRPIAASTVQLPELTLADRLIGLFVLSTFTVAIANGLMLVAAKGLP
Ga0306926_104237633	3300031954	Soil	LLVARGGRSTGWIIAILALSSVMAVMTIAELRRPIRASTVQVPELTVADRVIGLFVLGTFTVAVANGLILVAAKGLP
Ga0306922_107140342	3300032001	Soil	LLVARGGRSTGWIIAILALSSVMAVMTIAELRRPIRASTVQVPELTVADRVIGLFVLGTFTVAVAN
Ga0318533_108254261	3300032059	Soil	MGSIIAILALNLVITVLTIAALRRAVRVSTVQLPELAVADRAIVLFALGIFTLAIANGLMLVAAK
Ga0318533_110236231	3300032059	Soil	MGWIIAMVALSLVMGVMTIAELRRPVAASTVQLPELTLADRVIGLFVLGTFSVAIANGLI
Ga0318510_104807701	3300032064	Soil	MGWIIAILAISSVMAVLTIAELRRPIAASTVQLPELTLADRLIGLFVLGTFTVAIANGLILVAAKGLP
Ga0310914_110274531	3300033289	Soil	MGWVVAIVAVTVVMAVMTIAELRRPVAASTVQLPELTLADRLIGLLVLGTFTVAIANGLILVAAKGLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences