Metagenome / Metatranscriptome Family F089235

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089235
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	78 residues
Representative Sequence	PEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Number of Associated Samples	92
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	41.28 %
% of genes near scaffold ends (potentially truncated)	56.88 %
% of genes from short scaffolds (< 2000 bps)	96.33 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.972 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.936 % of family members)
Environment Ontology (ENVO)	Unclassified (33.028 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (58.716 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.03% β-sheet: 0.00% Coil/Unstructured: 73.97%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13924	Lipocalin_5	7.34
PF00296	Bac_luciferase	1.83
PF00563	EAL	0.92
PF01037	AsnC_trans_reg	0.92
PF08264	Anticodon_1	0.92
PF13603	tRNA-synt_1_2	0.92
PF01227	GTP_cyclohydroI	0.92
PF13358	DDE_3	0.92
PF07110	EthD	0.92
PF04542	Sigma70_r2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.92
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.92
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.92
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.92
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.92
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.92
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.92
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
All Organisms	root	All Organisms	33.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
cellular organisms	root	All Organisms → cellular organisms	33.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.10 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.10 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.26 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	6.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.42 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.83 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.92 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.42 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.92 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.42 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.75 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.92 %
Mesorhizobium xinjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium xinjiangense	0.92 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.92 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.42 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	2.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.92 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.92 %
Mesorhizobium xinjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium xinjiangense	0.92 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.42 %
Nocardioides sp. TF02-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	2.75 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.92 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.92 %
Mesorhizobium xinjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium xinjiangense	0.92 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10222140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1266	Open in IMG/M
3300001991\|JGI24743J22301_10028032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1101	Open in IMG/M
3300002239\|JGI24034J26672_10053158	Not Available	699	Open in IMG/M
3300002568\|C688J35102_118063465	Not Available	526	Open in IMG/M
3300002568\|C688J35102_120511196	Not Available	1131	Open in IMG/M
3300004081\|Ga0063454_101035849	Not Available	664	Open in IMG/M
3300004479\|Ga0062595_100845838	Not Available	762	Open in IMG/M
3300005093\|Ga0062594_102617521	Not Available	557	Open in IMG/M
3300005163\|Ga0066823_10024672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	960	Open in IMG/M
3300005165\|Ga0066869_10033081	Not Available	844	Open in IMG/M
3300005328\|Ga0070676_10835628	Not Available	682	Open in IMG/M
3300005331\|Ga0070670_101501977	Not Available	619	Open in IMG/M
3300005341\|Ga0070691_10477417	Not Available	717	Open in IMG/M
3300005356\|Ga0070674_102236427	Not Available	500	Open in IMG/M
3300005366\|Ga0070659_101370836	Not Available	628	Open in IMG/M
3300005366\|Ga0070659_101850758	Not Available	541	Open in IMG/M
3300005367\|Ga0070667_100822583	Not Available	863	Open in IMG/M
3300005439\|Ga0070711_101326603	Not Available	625	Open in IMG/M
3300005455\|Ga0070663_100683105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	871	Open in IMG/M
3300005456\|Ga0070678_100303843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	1357	Open in IMG/M
3300005458\|Ga0070681_10944409	Not Available	781	Open in IMG/M
3300005548\|Ga0070665_101069398	Not Available	818	Open in IMG/M
3300005563\|Ga0068855_100278173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1859	Open in IMG/M
3300005564\|Ga0070664_102244253	Not Available	518	Open in IMG/M
3300005840\|Ga0068870_11360355	Not Available	519	Open in IMG/M
3300006038\|Ga0075365_10012338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5070	Open in IMG/M
3300006038\|Ga0075365_10401273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300006038\|Ga0075365_10918785	Not Available	617	Open in IMG/M
3300006038\|Ga0075365_11184921	Not Available	537	Open in IMG/M
3300006042\|Ga0075368_10445529	Not Available	573	Open in IMG/M
3300006048\|Ga0075363_100088900	Not Available	1698	Open in IMG/M
3300006048\|Ga0075363_101047148	Not Available	504	Open in IMG/M
3300006175\|Ga0070712_101696457	Not Available	553	Open in IMG/M
3300006178\|Ga0075367_10278706	Not Available	1051	Open in IMG/M
3300006579\|Ga0074054_12056106	Not Available	524	Open in IMG/M
3300009551\|Ga0105238_11780616	Not Available	648	Open in IMG/M
3300010040\|Ga0126308_10828296	Not Available	642	Open in IMG/M
3300010044\|Ga0126310_10926508	Not Available	681	Open in IMG/M
3300010045\|Ga0126311_11730533	Not Available	528	Open in IMG/M
3300010147\|Ga0126319_1354748	Not Available	820	Open in IMG/M
3300010373\|Ga0134128_11023628	Not Available	913	Open in IMG/M
3300010397\|Ga0134124_10889662	Not Available	896	Open in IMG/M
3300010400\|Ga0134122_10507152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1093	Open in IMG/M
3300010403\|Ga0134123_12113829	Not Available	624	Open in IMG/M
3300011119\|Ga0105246_11592233	Not Available	617	Open in IMG/M
3300011332\|Ga0126317_10084876	Not Available	689	Open in IMG/M
3300011332\|Ga0126317_10242262	Not Available	770	Open in IMG/M
3300012212\|Ga0150985_100764742	Not Available	535	Open in IMG/M
3300012212\|Ga0150985_105143560	Not Available	824	Open in IMG/M
3300012212\|Ga0150985_105173411	Not Available	1134	Open in IMG/M
3300012212\|Ga0150985_109483039	Not Available	645	Open in IMG/M
3300012212\|Ga0150985_120593888	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300012212\|Ga0150985_122527185	Not Available	725	Open in IMG/M
3300012469\|Ga0150984_101354727	Not Available	531	Open in IMG/M
3300012469\|Ga0150984_116181804	Not Available	729	Open in IMG/M
3300012469\|Ga0150984_119720194	Not Available	659	Open in IMG/M
3300012907\|Ga0157283_10158071	Not Available	675	Open in IMG/M
3300012914\|Ga0157297_10422172	Not Available	540	Open in IMG/M
3300012916\|Ga0157310_10076118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1030	Open in IMG/M
3300012951\|Ga0164300_10679151	Not Available	620	Open in IMG/M
3300012955\|Ga0164298_11464031	Not Available	531	Open in IMG/M
3300012958\|Ga0164299_11136795	Not Available	586	Open in IMG/M
3300012960\|Ga0164301_10505357	Not Available	873	Open in IMG/M
3300012989\|Ga0164305_11579886	Not Available	585	Open in IMG/M
3300013297\|Ga0157378_11072306	Not Available	842	Open in IMG/M
3300013308\|Ga0157375_12180365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	660	Open in IMG/M
3300014969\|Ga0157376_10540233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1152	Open in IMG/M
3300014969\|Ga0157376_10634041	Not Available	1067	Open in IMG/M
3300014969\|Ga0157376_11356030	Not Available	742	Open in IMG/M
3300015077\|Ga0173483_10351485	Not Available	740	Open in IMG/M
3300015371\|Ga0132258_11892926	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300015371\|Ga0132258_11899827	Not Available	1499	Open in IMG/M
3300015374\|Ga0132255_100253078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2517	Open in IMG/M
3300017792\|Ga0163161_10229390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1440	Open in IMG/M
3300017965\|Ga0190266_10442354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300018073\|Ga0184624_10249931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	795	Open in IMG/M
3300018469\|Ga0190270_11866613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	657	Open in IMG/M
3300021082\|Ga0210380_10044796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1904	Open in IMG/M
3300022756\|Ga0222622_11132481	Not Available	576	Open in IMG/M
3300025899\|Ga0207642_11117356	Not Available	510	Open in IMG/M
3300025915\|Ga0207693_10359412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1139	Open in IMG/M
3300025916\|Ga0207663_11148889	Not Available	625	Open in IMG/M
3300025927\|Ga0207687_10599680	Not Available	928	Open in IMG/M
3300025932\|Ga0207690_10960657	Not Available	710	Open in IMG/M
3300025935\|Ga0207709_10060127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2368	Open in IMG/M
3300025941\|Ga0207711_10334583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1401	Open in IMG/M
3300025945\|Ga0207679_10935502	Not Available	793	Open in IMG/M
3300025960\|Ga0207651_12047071	Not Available	514	Open in IMG/M
3300025972\|Ga0207668_10124445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1958	Open in IMG/M
3300025986\|Ga0207658_11054190	Not Available	742	Open in IMG/M
3300026089\|Ga0207648_11961322	Not Available	547	Open in IMG/M
3300026121\|Ga0207683_10022521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5408	Open in IMG/M
3300027866\|Ga0209813_10179593	Not Available	773	Open in IMG/M
3300028379\|Ga0268266_10484264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1180	Open in IMG/M
3300028381\|Ga0268264_12187061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium xinjiangense	561	Open in IMG/M
3300028708\|Ga0307295_10048801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1090	Open in IMG/M
3300028710\|Ga0307322_10027887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1326	Open in IMG/M
3300028717\|Ga0307298_10060065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1050	Open in IMG/M
3300028720\|Ga0307317_10239147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. TF02-7	613	Open in IMG/M
3300028787\|Ga0307323_10163937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300028811\|Ga0307292_10041781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1694	Open in IMG/M
3300028819\|Ga0307296_10549805	Not Available	632	Open in IMG/M
3300028876\|Ga0307286_10043317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1513	Open in IMG/M
3300028885\|Ga0307304_10311303	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300030988\|Ga0308183_1113282	Not Available	632	Open in IMG/M
3300030989\|Ga0308196_1039042	Not Available	624	Open in IMG/M
3300031058\|Ga0308189_10286948	Not Available	638	Open in IMG/M
3300031123\|Ga0308195_1043704	Not Available	631	Open in IMG/M
3300031124\|Ga0308151_1030205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.38%
Environmental	Environmental	48.62%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.38%
Terrestrial	Environmental → Terrestrial	43.12%
Aquatic	Environmental → Aquatic	5.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.43%
Roots	Host-Associated → Plants → Roots	8.26%
Freshwater	Environmental → Aquatic → Freshwater	3.67%
Sediment	Environmental → Aquatic → Sediment	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.51%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.26%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	8.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.34%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.50%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.94%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	8.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031124	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_102221402	3300001686	Soil	LADLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
JGI24743J22301_100280324	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	VNHFRCAYAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
JGI24034J26672_100531582	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	PEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
C688J35102_1180634651	3300002568	Soil	MKHLAILSFILGMLVTSVPAQAQSRAGAQVQTAGFNGLFFDKSMTGGYEGYPPPTRRGYRTVARQRSN*
C688J35102_1205111961	3300002568	Soil	LADLVNHFRCAYAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0063454_1010358491	3300004081	Soil	MKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0062595_1008458381	3300004479	Soil	EAAMKHLAILSLILGVVVTSVPAQAQSRAGAQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0062594_1026175211	3300005093	Soil	MKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQ
Ga0066823_100246722	3300005163	Soil	MEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0066869_100330812	3300005165	Soil	MKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0070676_108356282	3300005328	Miscanthus Rhizosphere	DLVNDFACAHAHPEMEAAMKHLAILSLILGVVVTSVPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0070670_1015019771	3300005331	Switchgrass Rhizosphere	ETEAAMKNLAILSFILGVLVTTVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0070691_104774171	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0070674_1022364271	3300005356	Miscanthus Rhizosphere	MKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRS
Ga0070659_1013708361	3300005366	Corn Rhizosphere	ILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN*
Ga0070659_1018507582	3300005366	Corn Rhizosphere	MKNLAILSFILGVLVTTVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQR
Ga0070667_1008225833	3300005367	Switchgrass Rhizosphere	LSFILGLLVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPTRRGYRTVARQRSN*
Ga0070711_1013266032	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AYAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0070663_1006831052	3300005455	Corn Rhizosphere	LADLVNDFRCANAHPEMEEAMKYLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN*
Ga0070678_1003038433	3300005456	Miscanthus Rhizosphere	MKYLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN*
Ga0070681_109444092	3300005458	Corn Rhizosphere	LINDVRCANAHPEMEGAMKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDRSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0070665_1010693982	3300005548	Switchgrass Rhizosphere	MKNLAILSFILGVLVTTVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0068855_1002781731	3300005563	Corn Rhizosphere	GGKPLADLVNHFRCAYAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0070664_1022442531	3300005564	Corn Rhizosphere	CCLRPPYPDFGRGKPFADLVNDFACAHAHHEMEAAMKHLAILSLILGVVVTSVPAQAQSRAGAQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0068870_113603551	3300005840	Miscanthus Rhizosphere	EEAMKYLAILSFILGVLVASAPAQEQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN*
Ga0075365_100123385	3300006038	Populus Endosphere	MKHLAILSFVLGMLVASVPAQAQSRNGTQVQTAGFNGLFFDKSVAGGYEGYPPPMRRGYRTIARHRSN*
Ga0075365_104012731	3300006038	Populus Endosphere	MEAAMKHLAILSLILGVVVTSVPAQAQSRTGAQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0075365_109187851	3300006038	Populus Endosphere	LADLVNDVRCADAHPEMEEAMKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0075365_111849211	3300006038	Populus Endosphere	MKNLAILSFILGVLVTAAPAQAQSRTGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVAR
Ga0075368_104455291	3300006042	Populus Endosphere	MEEAMKHLAILSFVLGMLVASVPAQAQSRNGTQVQTAGFNGLFFDKSVAGGYEGYPPPMRRGYRTIARHRSN*
Ga0075363_1000889001	3300006048	Populus Endosphere	MKHLAILSLILGVVVTSVPAQAQSRTGAQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0075363_1010471482	3300006048	Populus Endosphere	MRIPEMEEAMKNLAILSFILGMLVTSVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRSMARQRSY*
Ga0070712_1016964572	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0075367_102787062	3300006178	Populus Endosphere	MKNLAILSFILGVLVTAAPAQAQSRTGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0074054_120561061	3300006579	Soil	KPLADLVNHFRCAYAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0105238_117806162	3300009551	Corn Rhizosphere	RRRYGRFGGGKPLADLVNDFRCANAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0126308_108282961	3300010040	Serpentine Soil	HPDMEDAMKRLAILSFILGLFVASVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN*
Ga0126310_109265081	3300010044	Serpentine Soil	LVNDFRCAHAHPDMEDAMKRLAILSFILGLFVASVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN*
Ga0126311_117305331	3300010045	Serpentine Soil	MEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQ
Ga0126319_13547482	3300010147	Soil	KPLADLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0134128_110236282	3300010373	Terrestrial Soil	MEAAMKHLAILSLILGVVVTSVPAQAQSRAGAQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0134124_108896622	3300010397	Terrestrial Soil	LHFGGGKPLADLVNYFRCANAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0134122_105071523	3300010400	Terrestrial Soil	LADLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQALSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0134123_121138291	3300010403	Terrestrial Soil	LADLVNYVRCADAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0105246_115922332	3300011119	Miscanthus Rhizosphere	EEAMKNLAILSFILGMLVTSVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRSMARQRSY*
Ga0126317_100848761	3300011332	Soil	LADLVNYFRCANAHPEMEEAMKHLAILSLILGVVVTSVPAQAQTRAGTQVQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTVARQRSN*
Ga0126317_102422621	3300011332	Soil	LADLVNHFRCAYAHSEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTVARQRSN*
Ga0150985_1007647421	3300012212	Avena Fatua Rhizosphere	DLVNYFRCANAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRAGAQVQAAGFNGLFFDKSMTGGYEGYPPPTRRGYRTVARQRSN*
Ga0150985_1051435601	3300012212	Avena Fatua Rhizosphere	MEETMKHLAILSFILGMLVTSVPAQAQSRAGAQVQTAGFNGLFFDKSMTGGYEGYPPPTRRGYRTVARQRSN*
Ga0150985_1051734111	3300012212	Avena Fatua Rhizosphere	CALPISFADLVNDFACAHAHPEMEAAMKHLAILSLILGVVVTSVPAQAQSRPGTQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0150985_1094830392	3300012212	Avena Fatua Rhizosphere	FISAEGNLWPIWSTTSDVQMHIPEMEEAMKNLAILSFILGMLVTSVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRSVARQRSY*
Ga0150985_1205938882	3300012212	Avena Fatua Rhizosphere	NAHPEMEEAMKHLAILSLILGVVVTSVPAQAQTRAGTQIQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTVARQRSN*
Ga0150985_1225271851	3300012212	Avena Fatua Rhizosphere	FRRFGQRLPMRVCASRKMEDAMKRLAILSFILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVSRQRSN*
Ga0150984_1013547271	3300012469	Avena Fatua Rhizosphere	FRCANAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRAGAQVQAAGFNGLFFDKSMTGGYEGYPPPTRRGYRTVARQRSN*
Ga0150984_1161818043	3300012469	Avena Fatua Rhizosphere	MEEAMKNLAILSFILGMLVTSVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRSMARQRSY*
Ga0150984_1197201941	3300012469	Avena Fatua Rhizosphere	MEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN*
Ga0157283_101580712	3300012907	Soil	AYAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSLGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGDRTVARQRSN*
Ga0157297_104221721	3300012914	Soil	LADLVNHFRCANAHPETEAAMKNLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTVARQRSN*
Ga0157310_100761183	3300012916	Soil	VTSVPAQAQSRGTLVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0164300_106791511	3300012951	Soil	VADLINDVRCANAHPEMEGAMKSLAILSLVLGVIVASAPAQAQSRAGTQVQTAGFNGLFFDRSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0164298_114640311	3300012955	Soil	DFGRGKPFADLVNDFACAHAHHKMEAAMKHLAILSLILGVVVTSVPAQAQSRAGAQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0164299_111367951	3300012958	Soil	VADLINDVRCANAHPEMEGAMKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDRSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0164301_105053571	3300012960	Soil	MKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDRSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0164305_115798861	3300012989	Soil	VADLINDVRCANAHPEMEGAMKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDRSVTGGYEGYPPPTRRGYRTV
Ga0157378_110723061	3300013297	Miscanthus Rhizosphere	HLAILSLILGVVVTSVPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0157375_121803651	3300013308	Miscanthus Rhizosphere	MKYLAILSFILGMLVASVPAQAQSRSGTQIQSAGFNGLFFDKSVTGGYEGYPPPTRRGYRAMARQRSN*
Ga0157376_105402333	3300014969	Miscanthus Rhizosphere	MEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVA
Ga0157376_106340413	3300014969	Miscanthus Rhizosphere	VADLINDVRCANAHPEMEGAMKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDRSVTVGYEGYPPPTRRGYRTVARQRSN*
Ga0157376_113560301	3300014969	Miscanthus Rhizosphere	FRCANAHPEMEEAMKYLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN*
Ga0173483_103514852	3300015077	Soil	EAMKYLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN*
Ga0132258_118929262	3300015371	Arabidopsis Rhizosphere	VADLINDVRCANAHPEMEGAMKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0132258_118998271	3300015371	Arabidopsis Rhizosphere	LVNDFACAHAHPEMEAAMKHLAILSLILGVVVTSVPAQAQSRAGAQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN*
Ga0132255_1002530782	3300015374	Arabidopsis Rhizosphere	MEGAMKSLAILSLVLGVIVVSVPAQAQSRAGTQVQTAGFNGLFFDRSVTGGYEGYPPPTRRGYRTVARQRSN*
Ga0163161_102293902	3300017792	Switchgrass Rhizosphere	MKHLAILSFILGMLVTSVPAQDQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0190266_104423542	3300017965	Soil	YPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0184624_102499312	3300018073	Groundwater Sediment	LADLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0190270_118666131	3300018469	Soil	LADLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRNAVRYRSN
Ga0210380_100447965	3300021082	Groundwater Sediment	RCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0222622_111324811	3300022756	Groundwater Sediment	MKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPMRRGYRTVARQRSN
Ga0207642_111173561	3300025899	Miscanthus Rhizosphere	MKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207693_103594122	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKNLAILSFILGVLVTTVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207663_111488892	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AYAHPEMEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207687_105996801	3300025927	Miscanthus Rhizosphere	LADLVNDFRCANAHPEMEEAMKYLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN
Ga0207690_109606571	3300025932	Corn Rhizosphere	LAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207709_100601272	3300025935	Miscanthus Rhizosphere	LADLVNYFRCANAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207711_103345832	3300025941	Switchgrass Rhizosphere	MEEAMKHLAILSFILGMLVTSVPAQAQSRGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207679_109355021	3300025945	Corn Rhizosphere	MKNLAILSFILGVLVTTAPAQAQSRTGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207651_120470711	3300025960	Switchgrass Rhizosphere	LVNDFRCANAHPEMEEAMKYLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN
Ga0207668_101244454	3300025972	Switchgrass Rhizosphere	MKHLAILSLILGVVVTSVPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN
Ga0207658_110541902	3300025986	Switchgrass Rhizosphere	HPEMEAAMKHLAILSLILGVVVTSVPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0207648_119613222	3300026089	Miscanthus Rhizosphere	MKHLAILSLILGVVVTSVPAQAQSRAGAQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVAR
Ga0207683_100225215	3300026121	Miscanthus Rhizosphere	MKHLAILSFILGMLVTSVPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0209813_101795931	3300027866	Populus Endosphere	MKHLAILSFVLGMLVASVPAQAQSRNGTQVQTAGFNGLFFDKSVAGGYEGYPPPMRRGYRTIARHRSN
Ga0268266_104842642	3300028379	Switchgrass Rhizosphere	MKHLAILSLILGVVVTSVPAQAQSRAGAQVQTAGFNGLFFDKSVTGGYEGYPPPARRGYRTVARQRSN
Ga0268264_121870612	3300028381	Switchgrass Rhizosphere	RRYGRFGGGKPLADLVNDFRCANAHPETEEAMKYLAILSFILGVLVASAPAQAQSRTAQAQTAGFNGLFFDKSVAGGYEGYPPPTRRGYRTMARQRSN
Ga0307295_100488012	3300028708	Soil	MEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN
Ga0307322_100278871	3300028710	Soil	ILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN
Ga0307298_100600652	3300028717	Soil	LADLVNYVRCADAHPEMEEAMKSLAILSLVLGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0307317_102391471	3300028720	Soil	MKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVAR
Ga0307323_101639372	3300028787	Soil	LVNDFRCAHAHPEMEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRGYRKVARQRN
Ga0307292_100417811	3300028811	Soil	YVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0307296_105498052	3300028819	Soil	GRGKPFADLVNDFRCAHAHPEMEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN
Ga0307286_100433172	3300028876	Soil	LADLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGIQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0307304_103113032	3300028885	Soil	DLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0308183_11132821	3300030988	Soil	KPFADLVNDFRCAHAHPEMEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN
Ga0308196_10390421	3300030989	Soil	ADLVNDFRCAHAHPEMEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN
Ga0308189_102869482	3300031058	Soil	ADLVNYVRCADAHPEMEEAMKSLAILSLVVGVIVASAPAQAQSRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN
Ga0308195_10437041	3300031123	Soil	PFADLVNDFRCAHAHPEMEDAMKSLAILSLILGVVVTSVPAQAQTRAGTQVQSASFNGLFFDKSATGGYEGYPPPAQRAYRKVARQRN
Ga0308151_10302051	3300031124	Soil	LADLVNDVRCAHAHPEMEEAMKSLAILSLALGVLVASVPAQAQTRAGTQVQTAGFNGLFFDKSVTGGYEGYPPPTRRGYRTVARQRSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089235

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences