Metagenome / Metatranscriptome Family F089234

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089234
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	55 residues
Representative Sequence	MNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQVLVGMVLPPARQHMPN
Number of Associated Samples	77
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.07 %
% of genes near scaffold ends (potentially truncated)	20.18 %
% of genes from short scaffolds (< 2000 bps)	74.31 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.890 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.440 % of family members)
Environment Ontology (ENVO)	Unclassified (39.450 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.211 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.05% β-sheet: 30.12% Coil/Unstructured: 57.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03466	LysR_substrate	29.36
PF08240	ADH_N	21.10
PF00479	G6PD_N	7.34
PF02781	G6PD_C	4.59
PF00873	ACR_tran	1.83
PF12802	MarR_2	1.83
PF09137	Glucodextran_N	0.92
PF00282	Pyridoxal_deC	0.92
PF02525	Flavodoxin_2	0.92
PF02321	OEP	0.92
PF02586	SRAP	0.92
PF01717	Meth_synt_2	0.92
PF01734	Patatin	0.92
PF02669	KdpC	0.92
PF13442	Cytochrome_CBB3	0.92
PF00285	Citrate_synt	0.92
PF07992	Pyr_redox_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	11.93
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.83
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.92
COG0372	Citrate synthase	Energy production and conversion [C]	0.92
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.92
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.92
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.92
COG2156	K+-transporting ATPase, KdpC subunit	Inorganic ion transport and metabolism [P]	0.92
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.92
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.92
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.67 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.92 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.75 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.83 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.92 %
Acanthopleuribacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Acanthopleuribacterales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.83 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.92 %
Acanthopleuribacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Acanthopleuribacterales → Acanthopleuribacteraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.83 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.92 %
Acanthopleuribacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Acanthopleuribacterales → Acanthopleuribacteraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.83 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.92 %
Acanthopleuribacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Acanthopleuribacterales → Acanthopleuribacteraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.75 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.83 %
Deinococcus rubellus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus rubellus	0.92 %
Acanthopleuribacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Acanthopleuribacterales → Acanthopleuribacteraceae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16840770	Not Available	1264	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105890946	All Organisms → cellular organisms → Bacteria	3372	Open in IMG/M
3300000789\|JGI1027J11758_12119086	Not Available	505	Open in IMG/M
3300004082\|Ga0062384_100393734	All Organisms → cellular organisms → Bacteria → Proteobacteria	890	Open in IMG/M
3300004479\|Ga0062595_101823898	Not Available	579	Open in IMG/M
3300005434\|Ga0070709_10104017	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300005437\|Ga0070710_10576323	Not Available	780	Open in IMG/M
3300005468\|Ga0070707_101854054	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005534\|Ga0070735_10447585	Not Available	771	Open in IMG/M
3300005541\|Ga0070733_10084050	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300005541\|Ga0070733_10638649	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005541\|Ga0070733_10893625	Not Available	597	Open in IMG/M
3300005542\|Ga0070732_10044859	All Organisms → cellular organisms → Bacteria	2546	Open in IMG/M
3300005546\|Ga0070696_100751226	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005591\|Ga0070761_10014735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus rubellus	4358	Open in IMG/M
3300006028\|Ga0070717_10480022	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300006175\|Ga0070712_101701218	Not Available	552	Open in IMG/M
3300006237\|Ga0097621_101704779	Not Available	600	Open in IMG/M
3300006755\|Ga0079222_10692395	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300006804\|Ga0079221_10577291	Not Available	752	Open in IMG/M
3300006806\|Ga0079220_12097577	Not Available	506	Open in IMG/M
3300006903\|Ga0075426_10026465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4154	Open in IMG/M
3300006903\|Ga0075426_10069673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2514	Open in IMG/M
3300007076\|Ga0075435_100320636	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300009826\|Ga0123355_10012831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12999	Open in IMG/M
3300009826\|Ga0123355_10280557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2301	Open in IMG/M
3300009826\|Ga0123355_10357884	All Organisms → cellular organisms → Bacteria → Proteobacteria	1926	Open in IMG/M
3300009826\|Ga0123355_10433783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1669	Open in IMG/M
3300009826\|Ga0123355_10911227	Not Available	953	Open in IMG/M
3300009826\|Ga0123355_11072125	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300009826\|Ga0123355_11405160	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300010049\|Ga0123356_10029438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5143	Open in IMG/M
3300010049\|Ga0123356_10722805	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300010373\|Ga0134128_12252769	Not Available	600	Open in IMG/M
3300011120\|Ga0150983_10447384	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012181\|Ga0153922_1069970	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Acanthopleuribacterales → Acanthopleuribacteraceae	784	Open in IMG/M
3300012683\|Ga0137398_10142786	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300012917\|Ga0137395_10219861	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300012922\|Ga0137394_10212574	All Organisms → cellular organisms → Bacteria → Acidobacteria	1653	Open in IMG/M
3300015374\|Ga0132255_101487520	Not Available	1024	Open in IMG/M
3300020579\|Ga0210407_10976679	Not Available	647	Open in IMG/M
3300020580\|Ga0210403_10622696	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300020581\|Ga0210399_10525712	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300020583\|Ga0210401_10052722	All Organisms → cellular organisms → Bacteria → Proteobacteria	3839	Open in IMG/M
3300020583\|Ga0210401_10066547	All Organisms → cellular organisms → Bacteria → Proteobacteria	3394	Open in IMG/M
3300020583\|Ga0210401_10299899	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300020583\|Ga0210401_10323136	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300021086\|Ga0179596_10040070	All Organisms → cellular organisms → Bacteria → Acidobacteria	1878	Open in IMG/M
3300021088\|Ga0210404_10035366	All Organisms → cellular organisms → Bacteria	2267	Open in IMG/M
3300021168\|Ga0210406_10801488	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300021170\|Ga0210400_10006278	All Organisms → cellular organisms → Bacteria	10022	Open in IMG/M
3300021171\|Ga0210405_10017543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5857	Open in IMG/M
3300021171\|Ga0210405_10364095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1140	Open in IMG/M
3300021178\|Ga0210408_10011649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7276	Open in IMG/M
3300021178\|Ga0210408_10166378	Not Available	1750	Open in IMG/M
3300021178\|Ga0210408_10597877	Not Available	874	Open in IMG/M
3300021402\|Ga0210385_11486205	Not Available	518	Open in IMG/M
3300021407\|Ga0210383_10298958	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300021407\|Ga0210383_10823215	Not Available	794	Open in IMG/M
3300021420\|Ga0210394_10000854	All Organisms → cellular organisms → Bacteria → Proteobacteria	55686	Open in IMG/M
3300021420\|Ga0210394_10019949	All Organisms → cellular organisms → Bacteria → Proteobacteria	6240	Open in IMG/M
3300021420\|Ga0210394_10284074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1450	Open in IMG/M
3300021432\|Ga0210384_10003366	All Organisms → cellular organisms → Bacteria → Proteobacteria	18573	Open in IMG/M
3300021432\|Ga0210384_11307817	Not Available	630	Open in IMG/M
3300021474\|Ga0210390_10291434	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300021477\|Ga0210398_10974354	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300021478\|Ga0210402_10510467	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300021479\|Ga0210410_10028637	All Organisms → cellular organisms → Bacteria → Proteobacteria	4818	Open in IMG/M
3300021559\|Ga0210409_10738949	Not Available	856	Open in IMG/M
3300022721\|Ga0242666_1074618	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300022724\|Ga0242665_10160113	Not Available	717	Open in IMG/M
3300022726\|Ga0242654_10398744	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300025915\|Ga0207693_10160529	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300025915\|Ga0207693_11321947	Not Available	538	Open in IMG/M
3300027109\|Ga0208603_1054271	Not Available	607	Open in IMG/M
3300027684\|Ga0209626_1000936	All Organisms → cellular organisms → Bacteria → Proteobacteria	6258	Open in IMG/M
3300027767\|Ga0209655_10182903	Not Available	691	Open in IMG/M
3300027842\|Ga0209580_10098370	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300027853\|Ga0209274_10002785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8492	Open in IMG/M
3300027867\|Ga0209167_10086293	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300027867\|Ga0209167_10535624	Not Available	641	Open in IMG/M
3300027889\|Ga0209380_10269026	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300027986\|Ga0209168_10156767	Not Available	1152	Open in IMG/M
3300028047\|Ga0209526_10640477	Not Available	676	Open in IMG/M
3300031057\|Ga0170834_106416960	Not Available	782	Open in IMG/M
3300031708\|Ga0310686_118204803	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300031715\|Ga0307476_10027663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3743	Open in IMG/M
3300031715\|Ga0307476_10080337	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300031715\|Ga0307476_10773367	Not Available	710	Open in IMG/M
3300031715\|Ga0307476_10930712	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300031718\|Ga0307474_10013679	All Organisms → cellular organisms → Bacteria → Proteobacteria	5869	Open in IMG/M
3300031720\|Ga0307469_10200829	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300031720\|Ga0307469_10558443	Not Available	1015	Open in IMG/M
3300031720\|Ga0307469_10812038	Not Available	859	Open in IMG/M
3300031740\|Ga0307468_101223857	Not Available	678	Open in IMG/M
3300031753\|Ga0307477_10388829	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300031753\|Ga0307477_10420448	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300031754\|Ga0307475_10019519	All Organisms → cellular organisms → Bacteria → Proteobacteria	4730	Open in IMG/M
3300031754\|Ga0307475_10194093	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300031820\|Ga0307473_10040689	All Organisms → cellular organisms → Bacteria → Proteobacteria	2118	Open in IMG/M
3300031820\|Ga0307473_11244221	Not Available	555	Open in IMG/M
3300031823\|Ga0307478_10026435	All Organisms → cellular organisms → Bacteria → Proteobacteria	4147	Open in IMG/M
3300031962\|Ga0307479_10049986	All Organisms → cellular organisms → Bacteria → Proteobacteria	4018	Open in IMG/M
3300032174\|Ga0307470_10723340	Not Available	762	Open in IMG/M
3300032180\|Ga0307471_100208276	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300032180\|Ga0307471_100443894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1435	Open in IMG/M
3300032180\|Ga0307471_101734905	Not Available	777	Open in IMG/M
3300032205\|Ga0307472_100237473	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300032893\|Ga0335069_10585303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1282	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.24%
Host-Associated	Host-Associated	13.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.40%
Arthropoda	Host-Associated → Arthropoda	8.26%
Plants	Host-Associated → Plants	4.59%
Aquatic	Environmental → Aquatic	1.83%
Fungi	Host-Associated → Fungi	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.40%
Digestive System	Host-Associated → Arthropoda → Digestive System	8.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.75%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.92%
Roots	Host-Associated → Plants → Roots	0.92%
Mycelium	Host-Associated → Fungi → Mycelium	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.72%
Loam	Environmental → Terrestrial → Soil → Loam	13.76%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.76%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	20.18%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.26%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	8.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.34%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03921380	2088090014	Soil	MVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPN
INPhiseqgaiiFebDRAFT_1058909464	3300000364	Soil	MTRETHMNEPMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPN*
JGI1027J11758_121190862	3300000789	Soil	MNEPMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPN*
Ga0062384_1003937342	3300004082	Bog Forest Soil	MNEQMVLLKAVDGKWEGWRCMALDQFLQRVDLGAWKAGQQLVGMILPPARQRTPS*
Ga0062595_1018238981	3300004479	Soil	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPNRSTDGGIQGK*
Ga0070709_101040172	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPN*
Ga0070710_105763232	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQKFLSRHDGAEAHMNAQMILLRAVGSTWEAWRCMPRDEFLRRLDLRTLHAGQRLVGMVLPPVRRRTAK*
Ga0070707_1018540541	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ANSCQGATTRETHMNKQMVLLRAVQGTWEGWRCMALEEFLQRVDLRALKAGQVLVGMVLPPARQHMPN*
Ga0070735_104475851	3300005534	Surface Soil	MIAQMVLLRAVDGSLEGWRCMALEEFLRRMDLGAWKAEQLLVGMVLPANWQQL
Ga0070733_100840502	3300005541	Surface Soil	MNERMILLRAVDGRWEGWRCIALEEFLQWMDLRAWRSEQLLEGMVLGPPRRQTAN*
Ga0070733_106386491	3300005541	Surface Soil	REAHVKEQMVLLRAAHGTWVGWRCMALDEFLHRVDLRAWKAGQLLVGMVLPPARQHMPN*
Ga0070733_108936252	3300005541	Surface Soil	MILLRAVDGRWEGWRCMALEEFLQWMDLRVWRSEQLLVGMVLGPVHRRMPN*
Ga0070732_100448593	3300005542	Surface Soil	MNEQRVLLRAVDGTWEGWRCMALEEFLRRVDLRSLKAGQLLVAVVLPPARHQAPN*
Ga0070696_1007512262	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNEQMVRLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPN*
Ga0070761_100147355	3300005591	Soil	MNAQMVLLRAVHGSWEGWRCMALDEFLQQLDLKALKAGQLLVGMVLPPPREQMPN*
Ga0070717_104800222	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPSARRQMPN*
Ga0070712_1017012182	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNAQMILLRAVDGSLEAWRCMPLDEFLRRLDLRALQAGQQLEGTVLPQVRLREAN*
Ga0097621_1017047792	3300006237	Miscanthus Rhizosphere	MQVRDGAEAHMNAQMILLRAVDGTWEAWRCMPLDEFLRRLDLRALQTGQRLVGTVLPPVRRRVAN*
Ga0079222_106923952	3300006755	Agricultural Soil	MNEQMVLLRAVHGTWEGWRCMALEEFLQRVDLRALKAGQLLVGMVLPQARAQMPN*
Ga0079221_105772912	3300006804	Agricultural Soil	MNEQMVLLRAVDGTWEGWRHMALEEFLQRVDLSALKTGQLLVAMVLPSARQ
Ga0079220_120975771	3300006806	Agricultural Soil	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKAGQLLVAVVLPAARQKVPN*
Ga0075426_100264655	3300006903	Populus Rhizosphere	MNEQMVLLRAVDETWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPN*
Ga0075426_100696731	3300006903	Populus Rhizosphere	MNDSMVLLRAVHGTWEGWRCMALEEFLQRVDLRALKAGQLLVGMVLP
Ga0075435_1003206363	3300007076	Populus Rhizosphere	MNDSMVLLRAVHGTWEGWRCMALEEFLRRLDLRALKAGQLLVGMVLPPARQQMPN*
Ga0123355_100128313	3300009826	Termite Gut	MSEQMVLLRAAQGTWEGWRCMARDEFLQRLDLRALQAGQLLVGMVLPPARQQMPNSPMG*
Ga0123355_102805571	3300009826	Termite Gut	MNEQTVLLRAVDGSWEGWRCMALEEFLQRIDLGAWRPGQLVVGMVLPT
Ga0123355_103578841	3300009826	Termite Gut	MNEQTVLLRAVDGTWEGWRCMALEEFLQRIDLGAWRPGQLVVGMVLPATSRRQMAGWSTGS*
Ga0123355_104337834	3300009826	Termite Gut	MNEQTVLLRAVDGTWEGWRCMALEEFLQRIDLDAWLPGQLVVGMVLPATSRRQTAGWSTRS*
Ga0123355_109112272	3300009826	Termite Gut	MNEQRVLLRALHGTWEGWRCMPLDEFLRRLDLRTLEAAELLVGVVLPPPRQPMPN*
Ga0123355_110721252	3300009826	Termite Gut	MNEQRVLLRAVHGTWEGWRCMALDEFLRHFDLGTLKAAELLVGMVLPPARRQMPN*
Ga0123355_114051601	3300009826	Termite Gut	MNEQMVLLRAMQGTWEGWRCMALDEFLQCLDLQALTAGQLLVGMVLPPARQQMPN*
Ga0123356_100294386	3300010049	Termite Gut	MSEQMVLLRAAQGTWEGWRCMARDEFLQRLDLRALQAGQLLVGMVLPPVRQQMPNSPMG*
Ga0123356_107228052	3300010049	Termite Gut	MKEQRVLLRAVHGTWEGWRCMALDEFLQRLDLRKLKAAELLVGMVLPPARQQMPN*
Ga0134128_122527691	3300010373	Terrestrial Soil	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLNALKTGRLLVAMVLPTARQQMPN*
Ga0150983_104473841	3300011120	Forest Soil	PGDANSGQGAMTPEAHMNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPARPQMPN*
Ga0153922_10699702	3300012181	Attine Ant Fungus Gardens	MILLRAVDGRWEGWRCMALEEFLQWMDLRVWRSGQLLVGMVLGPVHRQMPN*
Ga0137398_101427862	3300012683	Vadose Zone Soil	MNEQMVLLRAVHGTWEGWRCMALDEFLQRLDLKALRAGQLLVGVVLPPARQRMPN*
Ga0137395_102198612	3300012917	Vadose Zone Soil	AVHGTWEGWRCMALDEFLQRLDLKALRAGQLLVGVVLPPARQRMPN*
Ga0137394_102125742	3300012922	Vadose Zone Soil	MNAQMILLRAVHGTWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPPVRRRMAN*
Ga0132255_1014875201	3300015374	Arabidopsis Rhizosphere	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALQAGQLLVAMVLPTARQQMPN*
Ga0210407_109766793	3300020579	Soil	MNAQMILLRAVDGSWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPPVRRRRAT
Ga0210403_106226961	3300020580	Soil	MNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPARPQMLN
Ga0210399_105257122	3300020581	Soil	MTPEAHMNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPARPQMP
Ga0210401_100527222	3300020583	Soil	MKEQMVLLRAAHGTWEGWRCMALDDFLDRVDLRAWKAGQLLVGMVLPPARQHMPN
Ga0210401_100665471	3300020583	Soil	YANSGQGAMTPEAHMNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPARPQMLN
Ga0210401_102998992	3300020583	Soil	MKEQMVLLRAAHGTWVGWRCMALDEFLHRVDLRAWKAGQLLVGMVLPPARQHMPN
Ga0210401_103231364	3300020583	Soil	MNEQMVLLRAVHGTWEGWRCMALHEFLQRLDLRALKAGQLLVGMVLPPARQQMPN
Ga0179596_100400702	3300021086	Vadose Zone Soil	MNAQMILLRAVHGTWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPPVRR
Ga0210404_100353662	3300021088	Soil	MNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPARPQMPN
Ga0210406_108014882	3300021168	Soil	QMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPARPQMLN
Ga0210400_100062787	3300021170	Soil	MNAQMILLRAVDGTWEGWRCMPLDEFLRRFDLSALQAGQQLVGTVLPVRRQRPN
Ga0210405_100175432	3300021171	Soil	MNERMVLLRAVDGRWEGWRCMALEEFLRWMDLSAWRSEQLLVGMVLGPVRRQMPN
Ga0210405_103640952	3300021171	Soil	MNEPMVLLRAVHGTWEGWRCMALDEFLHRVDLRAWKAGQLLVGMVLPPARQHMPN
Ga0210408_100116497	3300021178	Soil	MNERMVLLRAVDGRWEGWRCMALEEFLRWMDLSAWRSEQLLVGMVLGPVRRRMPN
Ga0210408_101663782	3300021178	Soil	MNAQMILLRAVDGSWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPPVRRRRAN
Ga0210408_105978771	3300021178	Soil	MNEQMVLLRAVHGSWEGWRCMALHEFLQRLDLRALKAGQLLVGM
Ga0210385_114862051	3300021402	Soil	MKEQMVLLRAAHGTWEGWRCMALDEFLHRVDLRAWKAGQLLVGMVLPPARQHMPN
Ga0210383_102989582	3300021407	Soil	MKEQMVLLRAAHGTWEGWRCMALDDFLDRVDLRAWQAGQLLVGMVLPPARQHMPN
Ga0210383_108232151	3300021407	Soil	MRDEAHMNKQMVLLRAVHGAWEGWRCMGLEEFLQRVDLRALKAGQLLVGMVLPPARQHIP
Ga0210394_1000085427	3300021420	Soil	MKEQMVLLKAVDGKRQGWRCMALDQFLQRVDLRAWKAGQQLVGMILPPARQRTPS
Ga0210394_100199495	3300021420	Soil	MARKAHMNAQMILLRAVDGTWEGWRCMPLDEFLRRFDLRALQTGQRLVGTVLPQVRRQRP
Ga0210394_102840742	3300021420	Soil	MNERMILLRAVDGRWEGWRCIALEEFLQWMDLRAWRSEQLLVGMVLGPPRRQTAN
Ga0210384_100033661	3300021432	Soil	MNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPA
Ga0210384_113078172	3300021432	Soil	MNAPMILLRAVDGSWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPPVRRQRAT
Ga0210390_102914341	3300021474	Soil	MKEQMVLLRAAHGTWEGWRCMALDEFLHRVDLRAWKVGQLLVGMVLPPARQHMPN
Ga0210398_109743542	3300021477	Soil	AHGTWEGWRCMALDEFLHRVDLRAWKAGQLLVGMVLPPARQHMPN
Ga0210402_105104673	3300021478	Soil	MNAQMILLRAVDGSWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPPVRRQRAT
Ga0210410_100286372	3300021479	Soil	MNERMILLRAVDGRWEGWRCMALGEFLQRMDLRVWRSEQLLVGMVLGPVRRQMQN
Ga0210409_107389492	3300021559	Soil	AATSCRVTITREAHMNEQMVLLRAVDGRWEGWRCMALEQFLQRVDLEAWKAGQQLVGMILPPARQRTPS
Ga0242666_10746182	3300022721	Soil	QGATAREAHMKEQMVLLRAAHGTWEGWRCMALDEFLHRVDLRAWKAGQLLVGMVLPPARQHMPN
Ga0242665_101601133	3300022724	Soil	MTQEMVLLRAVDGTWEGWRCMALEEFLQRLDLDAWRDGQLLIGTVL
Ga0242654_103987442	3300022726	Soil	DADSCQCATTRETHMNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPSARRQMPN
Ga0207693_101605291	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTAR
Ga0207693_113219471	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNAQMILLRAVDGSLEAWRCMPLDEFLRRLDLRALQAGQQLEGTVLPQVRLREAN
Ga0208603_10542712	3300027109	Forest Soil	MNERKVLLRAVDGTWEGWRCMALDDFLDRVDLRAWQAGQLLVGMVL
Ga0209626_10009367	3300027684	Forest Soil	MNAQMILLRAVDGTWEAWRCMPLDEFLRRLDLKALRAGQRLVGTVLPPLRRPRAN
Ga0209655_101829031	3300027767	Bog Forest Soil	MNEQMVLLKAVDGKWEGWRCMALDQFLQRVDLGAWKAGQQLVGMILPPARQRTPS
Ga0209580_100983702	3300027842	Surface Soil	MNEQRVLLRAVDGTWEGWRCMALEEFLRRVDLRSLKAGQLLVAVVLPPARHQAPN
Ga0209274_100027857	3300027853	Soil	MNAQMVLLRAVHGSWEGWRCMALDEFLQQLDLKALKAGQLLVGMVLPPPREQMPN
Ga0209167_100862932	3300027867	Surface Soil	MNERMILLRAVDGRWEGWRCIALEEFLQWMDLRAWRSEQLLEGMVLGPPRRQTAN
Ga0209167_105356242	3300027867	Surface Soil	MILLRAVDGRWEGWRCMALEEFLQWMDLRVWRSEQLLVGMVLGPVHRRMPN
Ga0209380_102690261	3300027889	Soil	MKEQMVLLRAAHGTWEGWRCMALDEFLHRVDLRAWKAGQLLVGMVLPPARQHMPH
Ga0209168_101567672	3300027986	Surface Soil	MIAQMVLLRAVDGSLEGWRCMALEEFLRRMDLGAWKAEQLLVGMVLPANWQQLQN
Ga0209526_106404771	3300028047	Forest Soil	MNAQMILLRAVDGTWEAWRCMPLDEFLRRLDLKALQAGQRLVGTVLPPLRRPRAN
Ga0170834_1064169602	3300031057	Forest Soil	MNAQMILLRAVDGTWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPPVRRRTAN
Ga0310686_1182048031	3300031708	Soil	MKEHMVLLRAAQGTWEGWRCMALNEFLDRLDLRAWKAGQLLVGMVLPPARQHMPN
Ga0307476_100276635	3300031715	Hardwood Forest Soil	MNEQMVLLKAVDGRWEGWRCMALDQFLQRVDLDAWKAGQQLVGMILPPARQRTPS
Ga0307476_100803372	3300031715	Hardwood Forest Soil	MNEQMVLLRAVQGTWEGWRCMALEEFLQRVDLRALKAGQVLVGMVLPPTRQHMPN
Ga0307476_107733671	3300031715	Hardwood Forest Soil	MNGQMVLLRAVDGRWEGWRWMELDEFLQRVDLRALKAGQLLVGMVLPPARQQVPH
Ga0307476_109307121	3300031715	Hardwood Forest Soil	MNEQMVLLRAVQGTWEGWRCMALEEFLQQVDLRALKAGQLLVGMVLPPARRHMSN
Ga0307474_100136795	3300031718	Hardwood Forest Soil	EAHMNEQMVLLRAVQGTWEGWRCMALEEFLQQVDLRALKAGQLLVGMVLPPARRHMSN
Ga0307469_102008292	3300031720	Hardwood Forest Soil	MNAQMILLRAVDGSWEAWRCMPLDEFLRRLDLRALQAGQQLVGTVLPQVRRRRAN
Ga0307469_105584432	3300031720	Hardwood Forest Soil	MNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKAGQLLVAVVLPAARQKVPN
Ga0307469_108120382	3300031720	Hardwood Forest Soil	MNAQMILLRAVDGTWEAWRCMPLDEFLRRLDLRQLQAGQRLVGTVLPPARRRSAN
Ga0307468_1012238572	3300031740	Hardwood Forest Soil	MNAQMILLRAVDGSWEAWRCMPLDEFLRRLDLRALQAGQRLVGTVLPPVRPRRAN
Ga0307477_103888292	3300031753	Hardwood Forest Soil	MNAQMILLRAVDGTWEAWRRMPLDEFLRRLDLTALQAGQRLVGTVLPPVRRRRAN
Ga0307477_104204482	3300031753	Hardwood Forest Soil	MNEQRVLLRAVDGTWEGWRCMALEEFLRRVDLRSLKAGQLLVAMVLPPARQQVPS
Ga0307475_100195195	3300031754	Hardwood Forest Soil	MNEQMVLLRAVDGKWEGWRCMALEQFLQRVDLHAWKAGQQLVGMVLPAARQRTPS
Ga0307475_101940931	3300031754	Hardwood Forest Soil	MKEQMVLLRAVHGTWEGWRCMALEEFLQRVDLRALKAGQLLVGM
Ga0307473_100406894	3300031820	Hardwood Forest Soil	PRDADSCQGAMTRETHMNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMPN
Ga0307473_112442211	3300031820	Hardwood Forest Soil	MNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQVLVGMVLPPARQHMPN
Ga0307478_100264351	3300031823	Hardwood Forest Soil	MNEQRVLLRAVDGTWEGWRCMALEDFLRRVDLRSLKAGQLLVAVVLPPARHQAPN
Ga0307479_100499863	3300031962	Hardwood Forest Soil	MNEQMVLLRAADGSWEGWRCMALDEFLRRVDLSRLKAGQVLVGMVLPPARRQIPN
Ga0307470_107233402	3300032174	Hardwood Forest Soil	MNAQMILLRAVDGTWEAWRCMPLEEFLQRLDLRALQAGQRLVGTVLPPLRRRMAN
Ga0307471_1002082762	3300032180	Hardwood Forest Soil	MNEQMVLLRAVDGTWEGWRCMALDEFLQRVDLRALKAGQLLIGMVLPPARPQVLN
Ga0307471_1004438942	3300032180	Hardwood Forest Soil	MNERMILLRAVDGRWEGWRCMALEEFLQWMDLRAWRSEQLLVGMVLGPVRRQMPN
Ga0307471_1017349052	3300032180	Hardwood Forest Soil	MNKQMVLLRAVHGTWEGWRCMALEEFLQRVDLRALKAGQVLVGMVLPPARQHMPN
Ga0307472_1002374731	3300032205	Hardwood Forest Soil	MTRETHMNEQMVLLRAVDGTWEGWRYMALEEFLQRVDLSALKTGQLLVAMVLPTARQQMP
Ga0335069_105853032	3300032893	Soil	MNEQMVLLRAVDGTWEGWQCMALKEFLQQLDLETLQAGQLLVGMVLPPVRRQVQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089234

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences