Metagenome / Metatranscriptome Family F089191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	83 residues
Representative Sequence	MSLFGRHRWFGLAGGITLAFAVVSLTVPRGPVLTAIVDIGYLLLTLAVGGVMLANAWSTQGANRGFWALMGSGCM
Number of Associated Samples	89
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.32 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.83 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.385 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.009 % of family members)
Environment Ontology (ENVO)	Unclassified (25.688 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.312 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.25% β-sheet: 0.00% Coil/Unstructured: 41.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00490	ALAD	65.14
PF04011	LemA	1.83
PF12732	YtxH	0.92
PF13424	TPR_12	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0113	Delta-aminolevulinic acid dehydratase, porphobilinogen synthase	Coenzyme transport and metabolism [H]	65.14
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	1.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
All Organisms	root	All Organisms	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
cellular organisms	root	All Organisms → cellular organisms	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.35 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.67 %
Candidatus Kryptonia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.67 %
Candidatus Chrysopegis	genus	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia → Candidatus Chrysopegis	1.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.67 %
Candidatus Chrysopegis kryptomonas	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia → Candidatus Chrysopegis → Candidatus Chrysopegis kryptomonas	1.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.67 %
Candidatus Chrysopegis kryptomonas	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia → Candidatus Chrysopegis → Candidatus Chrysopegis kryptomonas	1.83 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.67 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.83 %
Candidatus Chrysopegis kryptomonas	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia → Candidatus Chrysopegis → Candidatus Chrysopegis kryptomonas	1.83 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.67 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.83 %
Candidatus Chrysopegis kryptomonas	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia → Candidatus Chrysopegis → Candidatus Chrysopegis kryptomonas	1.83 %
Mycolicibacterium vanbaalenii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium vanbaalenii	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10822915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium vanbaalenii	532	Open in IMG/M
3300002907\|JGI25613J43889_10189986	Not Available	548	Open in IMG/M
3300002914\|JGI25617J43924_10118284	Not Available	935	Open in IMG/M
3300002914\|JGI25617J43924_10310948	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300003505\|JGIcombinedJ51221_10483035	Not Available	500	Open in IMG/M
3300004080\|Ga0062385_10231918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300004080\|Ga0062385_10751967	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300004082\|Ga0062384_100132326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1387	Open in IMG/M
3300004082\|Ga0062384_100174420	Not Available	1244	Open in IMG/M
3300004082\|Ga0062384_100435030	Not Available	854	Open in IMG/M
3300004091\|Ga0062387_101224921	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300004092\|Ga0062389_100518088	Not Available	1343	Open in IMG/M
3300004092\|Ga0062389_102947756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	636	Open in IMG/M
3300005610\|Ga0070763_10003276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5991	Open in IMG/M
3300005921\|Ga0070766_10945868	Not Available	591	Open in IMG/M
3300006176\|Ga0070765_100827017	Not Available	875	Open in IMG/M
3300009519\|Ga0116108_1250831	Not Available	517	Open in IMG/M
3300009520\|Ga0116214_1410472	Not Available	529	Open in IMG/M
3300009523\|Ga0116221_1313109	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia → Candidatus Chrysopegis → Candidatus Chrysopegis kryptomonas	680	Open in IMG/M
3300009637\|Ga0116118_1105699	Not Available	941	Open in IMG/M
3300009759\|Ga0116101_1190402	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300009760\|Ga0116131_1076346	Not Available	1032	Open in IMG/M
3300009839\|Ga0116223_10219531	Not Available	1155	Open in IMG/M
3300010159\|Ga0099796_10343985	Not Available	642	Open in IMG/M
3300010159\|Ga0099796_10391079	Not Available	608	Open in IMG/M
3300010159\|Ga0099796_10435625	Not Available	581	Open in IMG/M
3300010343\|Ga0074044_10207046	Not Available	1302	Open in IMG/M
3300010343\|Ga0074044_10397220	Not Available	903	Open in IMG/M
3300010379\|Ga0136449_100243941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3347	Open in IMG/M
3300010379\|Ga0136449_103172182	Not Available	636	Open in IMG/M
3300012203\|Ga0137399_10375825	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300012917\|Ga0137395_10739332	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300014199\|Ga0181535_10676056	Not Available	589	Open in IMG/M
3300014501\|Ga0182024_12364702	Not Available	577	Open in IMG/M
3300014501\|Ga0182024_12928251	Not Available	505	Open in IMG/M
3300016750\|Ga0181505_10021892	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300017938\|Ga0187854_10169077	Not Available	982	Open in IMG/M
3300017940\|Ga0187853_10170397	Not Available	1033	Open in IMG/M
3300018012\|Ga0187810_10510718	Not Available	514	Open in IMG/M
3300018013\|Ga0187873_1356280	Not Available	534	Open in IMG/M
3300018030\|Ga0187869_10546380	Not Available	549	Open in IMG/M
3300018037\|Ga0187883_10202011	Not Available	1019	Open in IMG/M
3300018037\|Ga0187883_10728079	Not Available	518	Open in IMG/M
3300018047\|Ga0187859_10584623	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300018086\|Ga0187769_10537595	Not Available	883	Open in IMG/M
3300018468\|Ga0066662_11151829	Not Available	780	Open in IMG/M
3300019786\|Ga0182025_1380514	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1872	Open in IMG/M
3300020580\|Ga0210403_10206421	Not Available	1612	Open in IMG/M
3300020581\|Ga0210399_11246740	Not Available	588	Open in IMG/M
3300020582\|Ga0210395_10858318	Not Available	676	Open in IMG/M
3300021088\|Ga0210404_10509428	Not Available	680	Open in IMG/M
3300021171\|Ga0210405_10210836	Not Available	1540	Open in IMG/M
3300021180\|Ga0210396_10464675	Not Available	1109	Open in IMG/M
3300021420\|Ga0210394_10171096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1891	Open in IMG/M
3300021420\|Ga0210394_11212641	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300021432\|Ga0210384_11637711	Not Available	549	Open in IMG/M
3300021433\|Ga0210391_10920850	Not Available	682	Open in IMG/M
3300021479\|Ga0210410_11039728	Not Available	708	Open in IMG/M
3300021479\|Ga0210410_11363824	Not Available	602	Open in IMG/M
3300022731\|Ga0224563_1022881	Not Available	560	Open in IMG/M
3300022733\|Ga0224562_1020623	Not Available	542	Open in IMG/M
3300022840\|Ga0224549_1043766	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300022873\|Ga0224550_1003310	All Organisms → cellular organisms → Bacteria → Acidobacteria	2319	Open in IMG/M
3300023250\|Ga0224544_1010883	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300024225\|Ga0224572_1015038	All Organisms → cellular organisms → Bacteria → Acidobacteria	1479	Open in IMG/M
3300024295\|Ga0224556_1045298	Not Available	1091	Open in IMG/M
3300025501\|Ga0208563_1113349	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Kryptonia → Candidatus Chrysopegis → Candidatus Chrysopegis kryptomonas	515	Open in IMG/M
3300027497\|Ga0208199_1034396	Not Available	1102	Open in IMG/M
3300027590\|Ga0209116_1083007	Not Available	702	Open in IMG/M
3300027590\|Ga0209116_1131316	Not Available	547	Open in IMG/M
3300027591\|Ga0209733_1055522	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300027641\|Ga0208827_1008651	All Organisms → cellular organisms → Bacteria	3922	Open in IMG/M
3300027648\|Ga0209420_1032844	Not Available	1614	Open in IMG/M
3300027648\|Ga0209420_1037346	Not Available	1499	Open in IMG/M
3300027652\|Ga0209007_1085694	Not Available	793	Open in IMG/M
3300027676\|Ga0209333_1180287	Not Available	562	Open in IMG/M
3300027767\|Ga0209655_10019202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2302	Open in IMG/M
3300027829\|Ga0209773_10177323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300027884\|Ga0209275_10599530	Not Available	632	Open in IMG/M
3300027889\|Ga0209380_10715428	Not Available	573	Open in IMG/M
3300027889\|Ga0209380_10855458	Not Available	512	Open in IMG/M
3300027895\|Ga0209624_10623882	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300027895\|Ga0209624_10758091	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300028560\|Ga0302144_10227141	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300028566\|Ga0302147_10134890	Not Available	839	Open in IMG/M
3300028747\|Ga0302219_10412223	Not Available	529	Open in IMG/M
3300028762\|Ga0302202_10265563	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300028776\|Ga0302303_10117479	Not Available	961	Open in IMG/M
3300028779\|Ga0302266_10338866	Not Available	544	Open in IMG/M
3300028874\|Ga0302155_10501294	Not Available	516	Open in IMG/M
3300028906\|Ga0308309_10061953	Not Available	2751	Open in IMG/M
3300028906\|Ga0308309_11057103	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300029910\|Ga0311369_10371850	Not Available	1250	Open in IMG/M
3300029915\|Ga0311358_10869831	Not Available	636	Open in IMG/M
3300029952\|Ga0311346_11143646	Not Available	613	Open in IMG/M
3300030056\|Ga0302181_10079379	All Organisms → cellular organisms → Bacteria → Acidobacteria	1659	Open in IMG/M
3300030618\|Ga0311354_11562333	Not Available	581	Open in IMG/M
3300030687\|Ga0302309_10181453	Not Available	1089	Open in IMG/M
3300030707\|Ga0310038_10064318	Not Available	2017	Open in IMG/M
3300030760\|Ga0265762_1048840	Not Available	845	Open in IMG/M
3300031128\|Ga0170823_13075481	Not Available	842	Open in IMG/M
3300031708\|Ga0310686_105178474	All Organisms → cellular organisms → Bacteria → Acidobacteria	5845	Open in IMG/M
3300031708\|Ga0310686_107427012	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300031708\|Ga0310686_115552614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	808	Open in IMG/M
3300031715\|Ga0307476_10339194	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300032160\|Ga0311301_10093247	All Organisms → cellular organisms → Bacteria	5987	Open in IMG/M
3300033829\|Ga0334854_003478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3847	Open in IMG/M
3300034163\|Ga0370515_0247300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300034195\|Ga0370501_0392000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.15%
Aquatic	Environmental → Aquatic	22.94%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.63%
Freshwater	Environmental → Aquatic → Freshwater	22.94%
Peat	Environmental → Terrestrial → Peat	16.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.94%
Loam	Environmental → Terrestrial → Soil → Loam	17.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.17%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.34%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.34%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.50%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.59%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_108229151	3300001593	Forest Soil	MSLFGRLRWFGLAGGITLAFAVVSLTVPRGPVLTAISDVGYLLLMLAVSVGMLANAWSAEGVKRRFWALMGSGCILWACHQTGWVYYEVVHRTTVPNPWF
JGI25613J43889_101899861	3300002907	Grasslands Soil	MSLFARNRWFVLAGGITLAFAVVSLTVPRGPVLTGISDIGYLLLSLVAGVAMLANAWSERGANRR
JGI25617J43924_101182841	3300002914	Grasslands Soil	MSLFGRRRWFVLAGGITLAFAVVSLTVPRGPVLTAIADVGYFLVTLAVGVAMLANAWSTRGVNRRFWT
JGI25617J43924_103109482	3300002914	Grasslands Soil	MSLLGRNRWFVLAGGITLAFAVVSVAVPRGPLLTAISDVGYLLLSLVGVVAMLANAWSAHGAT
JGIcombinedJ51221_104830352	3300003505	Forest Soil	MIRYRRYRWFALAGGITLAFAVVSLTVPQGPVLTWISDLGYLLLLLALGAAVFTNAWSAEGAARHFWALTGSGIILWVFHQSGWVYCEV
Ga0062385_102319181	3300004080	Bog Forest Soil	MSLFGRNRWFVLAGGMTLAFAVVSATVPRGPVRTAIFDVGYLVLTLAVSGAMLAKAWSEQGANRRFWALMGSGCLLWACNQGAWVYF
Ga0062385_107519671	3300004080	Bog Forest Soil	MSLFTRHRWFVLAGAITLAFAVVPVTVPRGHTLSAISNIEYLLILLGICAAMLGNAWSA
Ga0062384_1001323261	3300004082	Bog Forest Soil	MSLLGRNRWFALAGGVTLAFALVSLLAPRGPALTAISDIGYLLLILTAGIAMLSNAWAAQTTNRRFWALMGSGYFLWAAHQSGW
Ga0062384_1001744201	3300004082	Bog Forest Soil	MIQYRRYRWFALAGGITLAFAVVSLTVPEGRVLTAIVDVGYLLLTLAVGVAMLANAWSGRGADQRFWALMGSGCILWACNE
Ga0062384_1004350302	3300004082	Bog Forest Soil	MNRFGRYRWFVLAGGITLALAVVSAIAPRGPVVTGSVDVGYLLLTLAVGVAMLANAWSGGGVNRRFWALMGSGCILWSINE
Ga0062387_1012249212	3300004091	Bog Forest Soil	MSIFQRYRWFALACGITLVFAAVSLMLPRGRALTAIFDVGYLLLILTVAVTMLANAWSQQGANRRFWFLMGAGSILWA
Ga0062389_1005180882	3300004092	Bog Forest Soil	MSLFGRHRWFGLAGGITLAFAVVSLTVPRGPVLTAIVDIGYLLLTLAVGGVMLANAWSTQGANRGFWALMGSGCM
Ga0062389_1029477561	3300004092	Bog Forest Soil	MSLFRQHRWFALAGATTLAFAVVSLTVPRGPVLAAIFDIAYLLLTLAVGGVMLANAWSTQAANRRFWALMGSGCIFWACNEAAWVYCEVLRHISFPDPSIMDVFLFLHL
Ga0070763_1000327611	3300005610	Soil	MSRFGQYRWFVLAGGITLAFAAVSLTVPRGPTLAAISDVGSLLLHLGVSVAMLANAWSER
Ga0070766_109458682	3300005921	Soil	MNRFGQYRWFVLAGGITLALAGVSAIAPRGPVLTGSVDVGYLLLTLAVGVAMLANAWSGGGANRRFWALMGSGCILWSLNEAAWVYFEVLRHT
Ga0070765_1008270171	3300006176	Soil	MSLFRRNRWFVLAGAVTLAFTAVSLALPRGPTLTAIIDFGYLLIALIIAGAMLLHAWSAQAVARRFWVLMGFGYFL
Ga0116108_12508311	3300009519	Peatland	MGLLGRNRWFALAGAITLAFAVVSLTIPRGPGLTAIIDFGYLFVTLAVGVAMLMNAWSARGVDRRFWALMGSGYLLWACNQAGW
Ga0116214_14104721	3300009520	Peatlands Soil	MSLFGRYRWFALAGGITLAFAVVSVTVPRGPGLTAISNVGYLLLILAVAASTLANAWSARGADRSFWALMGSGCILWASHQFGWVYCEVVRQTAVQDPWLMVGFCFFPQIPLLRGVGLG
Ga0116221_13131092	3300009523	Peatlands Soil	MSLFQRYRWFAAAAGITLAFAVVSLTVPRGPVLTAISDIGYELLILGAGAAMLANAWSTQGADRRFWALMASGCVLWASHQFGYISY
Ga0116118_11056991	3300009637	Peatland	MSLLGRNRWFALAGAITLAFAVVSLTMPRGPGLTAIIDFGYLLITLTIGVTMLLNARSAQGTSRRFWALMGSGYLLWACNQ
Ga0116101_11904021	3300009759	Peatland	MSLFGRNRWFVLAGGVTLAFAVVSLALPRGPALTAIFDVGYLLLTLAVSVATLTKAWRERDATRHFWALMGAGSLLWACNQ
Ga0116131_10763461	3300009760	Peatland	MSLLGRNRWFALAGAITLAFAVVSLTMPRGPGLTAIIDFGYLLITLTIGVTMLLTARSAQGTSRRFWALMGSGYLLWACNQAG
Ga0116223_102195311	3300009839	Peatlands Soil	MSLFQRYRWFALAGAITLAFGATSLIFPRGPALTAIFDVGYLLLILAVGATMLANAWSEQGAYRRFWALM
Ga0099796_103439852	3300010159	Vadose Zone Soil	MNLFGRHRWFVLAAGMTLAFAVVSLTVPRGPVLTAISDIGYFLVTLAVGVTMLANAWSTRGVNQRFWALMGSGCILWAA
Ga0099796_103910792	3300010159	Vadose Zone Soil	MSLFARNRWFVLAGGITLAFAVVSLTVPRGPVLTGISDIGYLLLSLVAGLAMLANAWSERGANRRFWALRRSGCFLWVC
Ga0099796_104356252	3300010159	Vadose Zone Soil	MSVFRRHRWFVLAAGITLGFAVVSLTIPRGPVLTAISDVGYLLLTLAVGVGMLTNAWSMRGVSQRFWALMASGCILWAA
Ga0074044_102070462	3300010343	Bog Forest Soil	MSLFGRHRWFALAGGFTLVLAVVSLTMPRGPVLTGMVDVGYLLLTLAVGVAMLGNAWSGRGA
Ga0074044_103972201	3300010343	Bog Forest Soil	MSLFGRNRWFVLAGGMTLAFAVVSATVPRGPVRTGIFDIGYLLLTLAVAVAMLAKAWS
Ga0136449_1002439414	3300010379	Peatlands Soil	MSWFGRYRWFLLAGGITLAFAVVSATVRQGPVLTAIADVGYLLLTLVAAVAMLGVARTAQGANRRFWALMGSGCILWLPSQAGWVYYEVVRHV
Ga0136449_1031721822	3300010379	Peatlands Soil	MTLYKRHRWFVLAGGMTLAFAVVSLTVPRGPVLTAIFDVGYLLLTLSAGGVMLANDWSAQGANR
Ga0137399_103758251	3300012203	Vadose Zone Soil	MSLFARNRWFVLAGGITLAFAVVSLTVPRGPVLTGISDIGYLLLSLVAGLAMLANAWLERGANRRFWALMGSGCLLWVCNQVAWVYF
Ga0137395_107393322	3300012917	Vadose Zone Soil	MSLFRLHRWFVLAAGITLAFAVVSLTVPRGPALTAISDISYFLVTLTVGVVMLANAWFSRGVTQRFWVLMGSGCILCAADLAGWV
Ga0181535_106760562	3300014199	Bog	MSLLGRNRWFALAGAITLAFAVVSLTMPRGPGLTAIIDFGYLLITLTIGVTMLLTARSAQGTSRRFWALMGSGYLLWA
Ga0182024_123647021	3300014501	Permafrost	MSLFGRLRWFGLAGGITLAFAVVSLTVPRGPVLTAISDVGYLLLMLAVSVGMLANAWSAEGVKRRFWALM
Ga0182024_129282511	3300014501	Permafrost	MSLFKRHRGFALAGGITLAFALVSLAVPRGPVLTAIFDFGYLLLTLSTGGVMLANAWSSHGANRRFWAL
Ga0181505_100218922	3300016750	Peatland	MSLFRRNRWFVLAGVVTLAFTVVSLMMPRGPALTAIIDFGYLLIALTIAVTMLLNAWSAQGAARRFWALMGFGYLLWAFNQAGWAYYEVLSRKTVPDPWSMD
Ga0187854_101690771	3300017938	Peatland	MSLFRRNRWFVLAGVVTLAFTVVSLMMPRGPALTAIIDFGYLLIALTIAVTMLLNAWSAQGAARRF
Ga0187853_101703972	3300017940	Peatland	MSLFRRNRWFVLAGVVTLAFTVVSLMMPRGPALTAIIDFGYLLIALTIAVTMLLNAWSAQGAARRFWALMGFGYLLWAFNQAGWAYYEVLSRKT
Ga0187810_105107182	3300018012	Freshwater Sediment	MSLFKRNRWFVLAGLITLAFTVVSLMMPRGPALTAIIDFGYLLITLTIAVTMLLNAWSAQGVARRFWALMGFGYLLWAFSQAGWPYYEVLYGKTVPD
Ga0187873_13562801	3300018013	Peatland	MGLSGRNRWFLLAAGITLAFAAVSATVPRGPALTAMGDVAYLVLTLALGGVMLANAWSARGANRRFWALMGSGCILWACNQAAWVYFEAFRRTAFPDPSIMDVFLFL
Ga0187869_105463801	3300018030	Peatland	MSLFRRNRWFVLAGVVTLAFTVVSLMMPRGPALTAIIDFGYLLIALTIAVTMLLNAWSAQGA
Ga0187883_102020112	3300018037	Peatland	MSLLGRHRWFVLAGAITLAFAVVSVTVPRGPVLTRMVDVGYLFLTLAAAVAMLANAWQAHGANRRFWALMGSGCILWAFNEAAWVYYEVLRHTPFPD
Ga0187883_107280791	3300018037	Peatland	MSPFKRHRWFALAGGITLAFALVSLTVPRGPALTGIFDFGYLLLTLSASGVMLANAWSSDGANRRFWALMASGCILWACNQAAWVYCEV
Ga0187859_105846231	3300018047	Peatland	LNRFGQYRWFVLAGGITLAFAAVSLTVPRGAALTAISDTGYLLLYLAVAVAMLANAWSER
Ga0187769_105375951	3300018086	Tropical Peatland	MSRFGRYRWFVLAGGITLAFAVVSLTVPGGPVLTAIVDVGYLLLTLAVGVAMLANAWL
Ga0066662_111518292	3300018468	Grasslands Soil	MSLFGRNRWFALAGGITLAFAGVSVTMPRGPVLTAISDVGYLLLSLVVVVVMLANAWSERGANRRFWALLGSGCLPWACNQVAWLHFAGVR
Ga0182025_13805141	3300019786	Permafrost	MSLFRRHRWFALAGGLTLGFAVVSLTLPRGAVLTSIFDVGYLLLTLAVGAVMLSNAWSEQGANRRFWALMGSGCILWACNQAAWVY
Ga0210403_102064211	3300020580	Soil	MSLFQRHRWFAGAAGITLAFAVVSLTVPRGPVLTAISDIGYELIILGAGAVMLANARSTQGADRRFWA
Ga0210399_112467401	3300020581	Soil	MSLFRQHRWFALAGAMTLAFAVVSLTVPRGPVLAAIFDVAYLLLTLAVGGAMLANAWSTQGANRRFWALMGSGCILWACNEAAWVYCEVLRHISFPDPS
Ga0210395_108583181	3300020582	Soil	MGLPRQHRWYVAAAGITLAFALVSLTVAPGRALTAITDLAYLFLILATCGAMLVNAWSAQGANRRVWALMGSGCILWAFHQSAYVYYEVLRQAAVP
Ga0210404_105094281	3300021088	Soil	MIRYGRYRWFALAGGITLAFAVVSLTVPQGPVLTWISDLGYLLLLLALGAAVFTNAWSAEGSARHFWALTGSGIILWVFHQSGWVYCEVVRHMPVPDPWIMDVVL
Ga0210405_102108361	3300021171	Soil	MSRFGQYRWFVLAGGITLAFAAVSLTVPRGPTLAAISDVGSLLLHLGVSVAMLANAWSERSANRRFWALMGAGSVLWA
Ga0210396_104646751	3300021180	Soil	MIRYRRYRWFALAGGITLAFAVVSLTVPQGPVLTWISDLGYLLLLLALGAAVFTNAWSAEGAARHFWALTGSGIILWVFHQSGWVYCEVVRHMPV
Ga0210394_101710963	3300021420	Soil	MSLLGRNRWFALACGITLAFALASLAMRRGPALTAVFDIGYLLLTLAVAVATLANAWSEQGANRRFWALMGSGCLLWAANQAAWVYYEVLRHTAFPDPSLMDVFLFLHVVPMI
Ga0210394_112126412	3300021420	Soil	MIRFRRYRWFALAGGITLAFAVVSRTVPQGRVLTTFTDLAYLLLLLILGAVVFTNAWSARGVDRKFWALMGSGT
Ga0210384_116377112	3300021432	Soil	MSLSGRHRWFVVAGGYTLAFAVVSLTMPRGPALNAISNVGYLLLIVAIAAIMLANAWAAQGANRRFWALMASGCILWASHQAAYSYYEVVRQSNLPDPWFMDVM
Ga0210391_109208502	3300021433	Soil	MSLFQRHRWFAAAAGITLAFAVVSLTVPRGPVLTAISDIGYELIILGAGAVMLANARSTE
Ga0210410_110397282	3300021479	Soil	MIRYRRYRWFALAGGITLAFAVVSLTVPQGPVLTWISDLGYLLLLLALGAAVFTNAWSAEGAARHFWALTGSGIILWVFHQSGWVYCEVVRHMPVPDPW
Ga0210410_113638242	3300021479	Soil	MGAFRRNRWFVLAGGITLAFAVVSLTVPRGPVLTAISDVGYLLLMLAVGVAMLATAWPARGTNRRFWALMGTGCVLWAAHQAGWVYCEVVRQTTVPDPWL
Ga0224563_10228811	3300022731	Soil	MSVFGQKRWFVLAGGITLAFAVMSATVPPGPALTAIVDVAYLVLTLVVGGVMLANAWPAQGSNRRFWALMGAGCILWACNE
Ga0224562_10206232	3300022733	Soil	MSLLGRNRWFALAGAITLAFAGVSLAIPHGQALTAIIDFGYLLIALIIAATLLWNAWSAEGAGRR
Ga0224549_10437662	3300022840	Soil	MSLFKRHRGFALAGGITLAFAVVSLTVPRGPALTTIFDFGYLLLTLSTGGVMLANAWSSHGANRRFWALM
Ga0224550_10033101	3300022873	Soil	MSLFGRLRWFGLAGGITLAFAVVSLTVPRGPVLTAISDVGYLLLMLAVSVGMLANAWSAEGVT
Ga0224544_10108831	3300023250	Soil	MLAMTVVSLTVPRGPFLTGLADVGYLLLTLAVGMAMLANARSGLGADRRFWALMGLGCMLWACNEAAWVYFEVVRRTAFP
Ga0224572_10150381	3300024225	Rhizosphere	MSAFQRNRWFVLAGGLTLTFALVSLAVPRGLALTAIDDVADFLLTLAVSAIMLGNAWSSHGSTRRFWALMSAGCFLWSANLGGWVYNEVF
Ga0224556_10452982	3300024295	Soil	MGLSGRNRWFLLAGGITLAFAAVSATVPRGPALTAMGDVAYLVLTLALGGVMLANAWSAQGANRRFWALMGSGCILWACNQAAWVYFEAFRRTAFPDPSIMD
Ga0208563_11133491	3300025501	Peatland	MGLLGRNRWFALAGAITLAFAVVSLTIPRGPGLTAIIDFGYLFFTLAVGVAMLMNAWS
Ga0208199_10343961	3300027497	Peatlands Soil	MSLFQRYRWFALAGAITLAFGATSLIFPRGPALTAIFDVGYLLLILAVGATMLANAWSEQGAYRRFWALMGAGSVLWASHQAGWVYYEVLRRAD
Ga0209116_10830072	3300027590	Forest Soil	MSLSGRHRCFALAGGIMLAMTVVSLTVPRGPFLTGLADVGYLLLTLAVGMAMLANARSG
Ga0209116_11313161	3300027590	Forest Soil	MSLFGRNRWFALAGGVTLAFAAVSLLIPRGSALTAISDIGYLLLILAAGIAILSNAWAARTANRRFWALMGSGYFLWAAHQSGW
Ga0209733_10555221	3300027591	Forest Soil	MSLFRRNRWFVLAGGITLAFALVSLAVPRGPVLTAISDVGYLLLTLAVGVAMLANAWSMRGVNRRFWALMGAGCILWAADLAGWIY
Ga0208827_10086511	3300027641	Peatlands Soil	MSLFQRYRWFALAGAITLAFGATSLIFPRGPALTAIFDVGYLLLILAVGATMLANAWSEQGAYRRFWALMGAGSVLWASHQAGWVYYEVLRRADVPDPWFMDVFLFL
Ga0209420_10328441	3300027648	Forest Soil	MSLFGRNRWFALAGGVTLAFAAVSLLIPRGSALTAISDIGYLLLILAAGIAILSNAWAARTANRRFWALMGSGYFLWAAHQSGWVYHEVIRHGVMPDPW
Ga0209420_10373462	3300027648	Forest Soil	MSLFERHRGFALAGGITLAFAVVSLTVPRGPALTTIFDFGYLLLTLSTGGVMLANAWSSHGANRRFWALMGSGCILWACNQA
Ga0209007_10856941	3300027652	Forest Soil	MRPMSLFVRYRWFVLAGGITLAFAAVSLTVSRGPVLTAISDVGYLLLYLALAVVMLANAW
Ga0209333_11802871	3300027676	Forest Soil	MRPMSLFVRYRWFVLAGGITLAFAAVSLTVSRGPVLTAISDVGYLLLYLALAVVMLANAWSERGANRRFWALMAAGSVLWAANQAAWAYCEVVRQTTAPDPWVMDVFLFL
Ga0209655_100192023	3300027767	Bog Forest Soil	MSLLGRNRWFALAGGVTLAFALVSLLAPRGPALTAISDIGYLLLILTAGIAMLSNAWAAQTTNRRFWALMGSGYFLWAAHQSGWVYHE
Ga0209773_101773232	3300027829	Bog Forest Soil	MSIFQRYRWFALACGITLVFAAVSLMLPRGRALTAIFDVGYLLLILTVAVTMLANAWSQQGANRRFWSLMGAGCVLWASHQAGWVYYEVLRHADVPDPWV
Ga0209275_105995302	3300027884	Soil	MSRFGQYRWFVLAGGVTLAFAVVSLTMARGPALAAISDVGSLFLYLAVAVAMLTNAWSERGANRRFWALMGAGSVLWAANQAAWVYCEVLRNATAPD
Ga0209380_107154282	3300027889	Soil	MSLFKRHRWFVLAGGMTLAFAVVSLTVPRGVALTAIFDVGYLLLTLATGGVMLANAWSAQGANRRFWALMGSGCILWACNEAAWV
Ga0209380_108554581	3300027889	Soil	MNRFGQYRWFVLAGGITLALAGVSAIAPRGPVLTGSVDVGYLLLTLAVGVAMLANAWS
Ga0209624_106238822	3300027895	Forest Soil	MSLFRRNRWFVLAGAVTLAFTAVSLALPRGPTLTAIIDFGYLLIALIIAGTMLLHAWSAQAVARRFWVLMGFGYFLWAANQSGWAYFEV
Ga0209624_107580911	3300027895	Forest Soil	MSLFGRLRWFGLAGGITLVFAVVSLTVPRGPVLTAISDVGYLLLMLAVSVAMLANA
Ga0302144_102271412	3300028560	Bog	MSLFGRNRWFVLAGGVTLAFAAVSLALPRGPALTAIFDVGYLLLTLAVSVAALTKAWQERDATRRFWALMGAGCLLWACNQVAWVYFEVIRHTA
Ga0302147_101348902	3300028566	Bog	MSPFKRHRWFALAGGITLAFALVSLTVPRGPALTAIFDFGYLLLTLSASGVMLANAWSSDGANRRFWALMASGCILWACNQAAWVYCEVLRHINF
Ga0302219_104122231	3300028747	Palsa	MLAMTVVSLTVPRGPFLTGLADVGYLLLTLAVGMAMLANARSGLGADRRFWALMGLGCMLWACNEAAWVYFEVVRRTAFPDPS
Ga0302202_102655631	3300028762	Bog	MSLSGRNRWFLLAGGITLAFAAVSAAVPRGPALTAMGDVAYLVLTLAVGGVMLANAWSAQGANRRFWALMGSGCILWACNQAAWVYFEAFRRTAFPDP
Ga0302303_101174792	3300028776	Palsa	MSLFKRHRGFALAGGITLAFAVVSLTVPRGPALTTIFDFGYLLLTLSTGGVMLANAWSSHGANRRFWALMGSG
Ga0302266_103388661	3300028779	Bog	MSLSGRNRWFLLAGGITLAFAAVSAAVPRGPALTAMGDVAYLVLTLAVGGVMLANAWSAQGANRRFWALMGSGCILWACNQAAWVYFEAFR
Ga0302155_105012941	3300028874	Bog	MSPFKRHRWFALAGGITLAFALVSLTVPRGPALTAIFDFGYLLLTLSASGVMLANAWSSDGANRRFWALMASGCILWACNQAAWVYCEVLRHINFPDP
Ga0308309_100619533	3300028906	Soil	MIQFGRYRWFALAGGITLALAVVSAIAPPGPVLTGGVDVGYLLLTLTVGVATLVNAWSGQGANRRFWALMGLGCLLWACNE
Ga0308309_110571032	3300028906	Soil	MSLFRRNRWFVLAGAVTLAFTAVSLALPRGPTLTAIIDFGYLLIALIIAGAMLLHAWSAQAVARRFWVLMGFGYFLW
Ga0311369_103718502	3300029910	Palsa	MSLFGRHRWFALAGGMTLAFAVVSLTAPRGPALTAIVDVGYLLLTLAVGGVMLANAWSAQAANRRFWALMGAGCILWACNEAAWVYCEVLRHISFPEPSLM
Ga0311358_108698311	3300029915	Bog	MSLSGRNRWFLLAGGITLAFAAVSAAVPRGPALTAMGDVAYLVLTLAVGGVMLANAWSAQGANRRFWALMGSGCILWACNQAAWVYFEAFRRTAFPDPSIMDVFL
Ga0311346_111436461	3300029952	Bog	MGLSGRNRWFLLAGGITLAFAAVSATVPRGPALTAMGDVAYLVLTLALGGVMLANAWSAQGANRRFWALMGSGCILWACNQAAWVYFEAFRRTAFPDPSIMDVFLFLH
Ga0302181_100793791	3300030056	Palsa	MSLFGRNRWFVLAGGITLAFAVVSVMVPRGPVLTAISNIGYLLLILTTGMAMLANAWSAQGANRRFWALMASGCILWASHQLGWVYREVVRQTTVPDPWFMDVILFLH
Ga0311354_115623332	3300030618	Palsa	MSLFGRLRWFELAGGITLAFAVVSLTVPRGPVLTAISDVGYLLLMLAVSVAMLANAWSAEGVKRRFWTLMG
Ga0302309_101814532	3300030687	Palsa	MSLFKRHRGFALAGGITLAFAVVSLTVPRGPALTTIFDFGYLLLTLSTGGVMLANAWSSHGANRRFWALMG
Ga0310038_100643181	3300030707	Peatlands Soil	MSLFQRYRWFAAAAGITLAFAVVSLTVPRGPVLTAISDIGYELLILGAGAAMLANAWSTQGADRRFWALMASGCVLW
Ga0265762_10488401	3300030760	Soil	MSLFRRNRWFVLAGAVTLAFTAVSLALPRGPTLTAIIDFGYLLIALIIAGTMLLHAWSAQAVARRFWVLMGFGYFLWAANQSGWAYFEVLRHQTVPDPWSMDIFL
Ga0170823_130754811	3300031128	Forest Soil	LSRHRWFVLAVGITLASAVVSVTLPRGRALTAISNIGYLLLILGTCAVMLANARSAQGTNRRFWALTAA
Ga0310686_1051784744	3300031708	Soil	LFRRYRWFVFAGGITLAFAVVSVAVPRGPVLTAISNIGYLLLILVVCVAMLANAWSARGANRHFWA
Ga0310686_1074270121	3300031708	Soil	MGMSLFHRHRWFALAGAITLAFAIVSVALPPGPALTAIFDVGCFLLYLSVAIAMLANAWSEQGANRRFWALMGAGSFLWVSNQAAWIYYEMVRHTGAPDPWFMDV
Ga0310686_1155526143	3300031708	Soil	MIRFRRYRWFVLAGGITLVFTVVSLTVPRGPVLTAISDLGYLLLLLTFGAAVVANAWS
Ga0307476_103391942	3300031715	Hardwood Forest Soil	MSLFQRNRWFVLAGGVTLAFAVASLALPRGPALTAFFDVGDLVVTLALAAIMLANARSER
Ga0311301_100932471	3300032160	Peatlands Soil	MSLFGRYRWFALAGGITLAFAVVSVTMPRGPGLTAISNIGYLLLILAVAATMLANAWSARGADRSFWA
Ga0334854_003478_3_290	3300033829	Soil	MSLFGRHRWFALAGGMTLAFAVVSLTVPRGPVLTAMVDVGYLLLTLAVGGVMLANAWSAQGANRRFWALMGAGCILWACNEAAWVYCEVLRHISFP
Ga0370515_0247300_2_211	3300034163	Untreated Peat Soil	MSRFGRHRWFVLAGGITLALAVVSLTVPRGPLLTGMVDVGYLLLTLAVGVAMLANAWSERGANRSFWALM
Ga0370501_0392000_3_371	3300034195	Untreated Peat Soil	MSVFSRHRWFVLAGAVTLAFATVSLTVPRGAALTAIADIAYLLLTLAVGTAMLVNAWFRQGTDRRFWALMGSGYLLWSCNEAAWVYCEVWRHTAFPDPSFMDVFLFLHLIPMIAAVGLRPHRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences