Metagenome / Metatranscriptome Family F089185

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089185
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	69 residues
Representative Sequence	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAANPAAGIWVSSTVSRGTWILCGIFVIVSAILLWLLVISR
Number of Associated Samples	88
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.44 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	85.32 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.046 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (55.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.202 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.00% β-sheet: 0.00% Coil/Unstructured: 47.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00027	cNMP_binding	6.42
PF13545	HTH_Crp_2	6.42
PF13620	CarboxypepD_reg	5.50
PF10091	Glycoamylase	4.59
PF04185	Phosphoesterase	4.59
PF02915	Rubrerythrin	2.75
PF04679	DNA_ligase_A_C	2.75
PF01230	HIT	0.92
PF02416	TatA_B_E	0.92
PF01432	Peptidase_M3	0.92
PF02706	Wzz	0.92
PF13505	OMP_b-brl	0.92
PF00437	T2SSE	0.92
PF00561	Abhydrolase_1	0.92
PF06750	DiS_P_DiS	0.92
PF03544	TonB_C	0.92
PF16363	GDP_Man_Dehyd	0.92
PF13525	YfiO	0.92
PF00232	Glyco_hydro_1	0.92
PF03976	PPK2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	4.59
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.75
COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	Cell motility [N]	2.75
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.92
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.92
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.92
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.92
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.05 %
Unclassified	root	N/A	44.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.05 %
Unclassified	root	N/A	44.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.05 %
Unclassified	root	N/A	44.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.95 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.95 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.43 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.92 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.95 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.92 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.95 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.59 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	0.92 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.92 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10005824	All Organisms → cellular organisms → Bacteria	10818	Open in IMG/M
3300001356\|JGI12269J14319_10096284	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300001546\|JGI12659J15293_10111864	Not Available	593	Open in IMG/M
3300004092\|Ga0062389_104873065	Not Available	505	Open in IMG/M
3300004152\|Ga0062386_101128342	Not Available	651	Open in IMG/M
3300004152\|Ga0062386_101187571	Not Available	634	Open in IMG/M
3300005436\|Ga0070713_100051607	All Organisms → cellular organisms → Bacteria	3401	Open in IMG/M
3300005538\|Ga0070731_10171857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1438	Open in IMG/M
3300005541\|Ga0070733_10607499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	733	Open in IMG/M
3300006059\|Ga0075017_101145551	Not Available	608	Open in IMG/M
3300006102\|Ga0075015_100225197	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300006162\|Ga0075030_101131127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300006176\|Ga0070765_101116359	Not Available	745	Open in IMG/M
3300009520\|Ga0116214_1127000	Not Available	944	Open in IMG/M
3300009520\|Ga0116214_1241703	Not Available	685	Open in IMG/M
3300009523\|Ga0116221_1216588	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300009552\|Ga0116138_1203070	Not Available	547	Open in IMG/M
3300009618\|Ga0116127_1179747	Not Available	518	Open in IMG/M
3300009623\|Ga0116133_1126314	Not Available	661	Open in IMG/M
3300009624\|Ga0116105_1128821	Not Available	656	Open in IMG/M
3300009640\|Ga0116126_1254345	Not Available	550	Open in IMG/M
3300009645\|Ga0116106_1041916	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300009762\|Ga0116130_1243275	Not Available	572	Open in IMG/M
3300010339\|Ga0074046_10469390	Not Available	754	Open in IMG/M
3300010341\|Ga0074045_10372212	Not Available	929	Open in IMG/M
3300010341\|Ga0074045_11042126	Not Available	513	Open in IMG/M
3300010343\|Ga0074044_10475056	Not Available	817	Open in IMG/M
3300010343\|Ga0074044_11009345	Not Available	545	Open in IMG/M
3300010379\|Ga0136449_100044515	All Organisms → cellular organisms → Bacteria	10179	Open in IMG/M
3300010379\|Ga0136449_100142986	All Organisms → cellular organisms → Bacteria	4722	Open in IMG/M
3300010379\|Ga0136449_100521658	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300010379\|Ga0136449_104082662	Not Available	544	Open in IMG/M
3300011110\|Ga0138578_1039843	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300014158\|Ga0181521_10524160	Not Available	564	Open in IMG/M
3300014162\|Ga0181538_10737811	Not Available	509	Open in IMG/M
3300014164\|Ga0181532_10222729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300014169\|Ga0181531_10011419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	5101	Open in IMG/M
3300014638\|Ga0181536_10188100	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300014657\|Ga0181522_10062717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2107	Open in IMG/M
3300014657\|Ga0181522_10486051	Not Available	743	Open in IMG/M
3300016730\|Ga0181515_1043956	Not Available	827	Open in IMG/M
3300017823\|Ga0187818_10338724	Not Available	663	Open in IMG/M
3300017925\|Ga0187856_1283526	Not Available	575	Open in IMG/M
3300017933\|Ga0187801_10191844	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300017933\|Ga0187801_10453938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	538	Open in IMG/M
3300017941\|Ga0187850_10023953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3435	Open in IMG/M
3300017941\|Ga0187850_10167016	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300017942\|Ga0187808_10161972	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300017943\|Ga0187819_10080502	Not Available	1944	Open in IMG/M
3300017943\|Ga0187819_10554792	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300017946\|Ga0187879_10064649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2131	Open in IMG/M
3300017955\|Ga0187817_10798856	Not Available	602	Open in IMG/M
3300017996\|Ga0187891_1239442	Not Available	606	Open in IMG/M
3300017996\|Ga0187891_1266879	Not Available	565	Open in IMG/M
3300018002\|Ga0187868_1316852	Not Available	512	Open in IMG/M
3300018004\|Ga0187865_1016835	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300018005\|Ga0187878_1116727	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300018015\|Ga0187866_1340000	Not Available	519	Open in IMG/M
3300018021\|Ga0187882_1347067	Not Available	566	Open in IMG/M
3300018025\|Ga0187885_10109976	Not Available	1332	Open in IMG/M
3300018026\|Ga0187857_10265090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	789	Open in IMG/M
3300018035\|Ga0187875_10118594	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300018035\|Ga0187875_10659427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	550	Open in IMG/M
3300018038\|Ga0187855_10216382	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300018038\|Ga0187855_10877194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	524	Open in IMG/M
3300018040\|Ga0187862_10513173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	719	Open in IMG/M
3300018043\|Ga0187887_10023503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3944	Open in IMG/M
3300018057\|Ga0187858_10024329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4665	Open in IMG/M
3300018057\|Ga0187858_10040676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3417	Open in IMG/M
3300018085\|Ga0187772_10174400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300018086\|Ga0187769_10619978	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300018086\|Ga0187769_10673395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	782	Open in IMG/M
3300018086\|Ga0187769_10711197	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300018086\|Ga0187769_10827667	Not Available	700	Open in IMG/M
3300018090\|Ga0187770_11048369	Not Available	657	Open in IMG/M
3300019082\|Ga0187852_1278429	Not Available	670	Open in IMG/M
3300021477\|Ga0210398_10530237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	958	Open in IMG/M
3300022524\|Ga0224534_1080045	Not Available	597	Open in IMG/M
3300024238\|Ga0224523_1152201	Not Available	515	Open in IMG/M
3300025612\|Ga0208691_1044885	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300025619\|Ga0207926_1107174	Not Available	673	Open in IMG/M
3300025928\|Ga0207700_11688670	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300026489\|Ga0257160_1086124	Not Available	562	Open in IMG/M
3300027634\|Ga0209905_1040215	Not Available	718	Open in IMG/M
3300027698\|Ga0209446_1118635	Not Available	682	Open in IMG/M
3300027745\|Ga0209908_10140408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	629	Open in IMG/M
3300027824\|Ga0209040_10351088	Not Available	700	Open in IMG/M
3300028558\|Ga0265326_10178402	Not Available	608	Open in IMG/M
3300028748\|Ga0302156_10140128	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300028866\|Ga0302278_10445824	Not Available	562	Open in IMG/M
3300029817\|Ga0247275_1012675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2979	Open in IMG/M
3300029917\|Ga0311326_10081306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1819	Open in IMG/M
3300029917\|Ga0311326_10090788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1704	Open in IMG/M
3300029922\|Ga0311363_10022965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10873	Open in IMG/M
3300030020\|Ga0311344_10705458	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300030399\|Ga0311353_11705195	Not Available	506	Open in IMG/M
3300030506\|Ga0302194_10321832	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300030706\|Ga0310039_10185620	Not Available	826	Open in IMG/M
3300030707\|Ga0310038_10162121	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300030707\|Ga0310038_10495792	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300030943\|Ga0311366_11688034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	541	Open in IMG/M
3300031027\|Ga0302308_10845389	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300031231\|Ga0170824_104252236	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300032160\|Ga0311301_10724266	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300032782\|Ga0335082_11721040	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300032829\|Ga0335070_10274600	All Organisms → cellular organisms → Bacteria → Acidobacteria	1642	Open in IMG/M
3300033826\|Ga0334847_001248	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300034195\|Ga0370501_0197494	Not Available	708	Open in IMG/M
3300034199\|Ga0370514_106760	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.46%
Aquatic	Environmental → Aquatic	48.62%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.87%
Soil	Environmental → Terrestrial → Soil	38.53%
Peat	Environmental → Terrestrial → Peat	11.93%
Sediment	Environmental → Aquatic → Sediment	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	45.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.93%
Loam	Environmental → Terrestrial → Soil → Loam	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	32.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	21.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.59%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.59%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.75%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011110	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100058241	3300001356	Peatlands Soil	MGGFSILTNRKRAIVALVHSVVFLMIAVRQMVATNPAAGIWVTSTVSRGTWILCGILAIVSAILLWLLIISGGWMEKIYFG
JGI12269J14319_100962841	3300001356	Peatlands Soil	MPAASGTVWLRMGGFSILTNRKRAVVALVHSVVFLLIAVRQMVAADSAVGIWEPSAVSRGTWILCGIFAIVSSILL
JGI12659J15293_101118642	3300001546	Forest Soil	MGGFSILTKRSRAVVALVYSVVFRLIAVPRMVAANPASGIWLPPRVPTGTWILCG
Ga0062389_1048730652	3300004092	Bog Forest Soil	MLGFSILTNRKRAIVALVHSLVFLLIAVRQMVAANPASGIWVASSVAPGTWVLCGIFALVSAILLWLLVISRG
Ga0062386_1011283421	3300004152	Bog Forest Soil	MGGFSILTNRKRAMVALLHSVMFLLIAVRQMVAANPAAGIWVGSTVSRATWILCGIFAIVSSILLWLLVI
Ga0062386_1011875711	3300004152	Bog Forest Soil	MGGFSILTNRKRALVALLHSVVFLLIAVRQMVAANPAAGIWVGSTVSRATWILCGIFAIVSSILLWLLVI
Ga0070713_1000516075	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGGFSILTNRKRAIVAVVHSVIFLLIAVRQMVAAQPAAGIRVLSTVSPGTRILCGIL
Ga0070731_101718571	3300005538	Surface Soil	MDGFSILTNRKRAVVALAHSIVFLLIAVRQMVASSPAAGVWQPSRVLPGTWVLCAIFAIVSAVLLWL
Ga0070733_106074992	3300005541	Surface Soil	MTGFSILTNRKRAMVALVHSVVFLLIAVRQMVAATPADGVWIPSAVRPGTWILCGVFAVVSAILLWL
Ga0075017_1011455511	3300006059	Watersheds	MGGFSILTNRKRAVVALVHSVVFLLIAVRQMVAANPAAGIWIPATVSRGTWILCGIFTIVSAILLWLLVI
Ga0075015_1002251971	3300006102	Watersheds	MYIQVSMDGFSILTNRKRAIVALVHSVVFLLVAVRQMVAANPTAGIWVASSVSRGTWI
Ga0075030_1011311271	3300006162	Watersheds	MGGFSILTNRKRAVLALVHSVVFLLIAVRQMVAANPAAGIWVPSSVSRGTWILCGIFAVV
Ga0070765_1011163592	3300006176	Soil	MGGFSILTKRSRAVVALVYSVVFRLIAVPRMVAANPASGIWLPPRVPTGTWILCGVYVIVSSILLYLLVISRGWMGKFY
Ga0116214_11270001	3300009520	Peatlands Soil	MGEFSILTNRKRAMIALAHSVVFLLVAVRQLVAVNPATGIRLTSTVPPRTWILCGIFAIVSSILLGLLVISRGWMEKFYFG
Ga0116214_12417031	3300009520	Peatlands Soil	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAQPSTGIWVASTVSRGTWILCGIFAIV
Ga0116221_12165882	3300009523	Peatlands Soil	MGGFSILTNRKRAVVALVHSVVFLLIAVRQMVAADSAVGIWEPSAVSRGTWILCGIFAIV
Ga0116138_12030701	3300009552	Peatland	MSGFSILTNRKRAVVALVHSIVFLLIAVRQMVAADPAAGIWETSTVTPGAWILCGIFLVVSSILLWLLI
Ga0116127_11797471	3300009618	Peatland	MGGFSILTNRKRAVVALVHSVVFLLIALRQMIAARPAAGIWLPSTVSRGTWILCGIFVIVSSILLWLLLISRGWM
Ga0116133_11263142	3300009623	Peatland	MSGFSILTNRKRAVVALVHSGVFLLIALRQMLAPNPAAGLWSPGKVAWGTWILCGVFVVVSAILLGLLLMACGWLE
Ga0116105_11288211	3300009624	Peatland	MGGFSILTNRKRAVVALVHSVVFLLIAVRQMVAANPASGIWVPSTVPTGTWILCGVF
Ga0116126_12543451	3300009640	Peatland	MGGFSILTNRKRAVVALAHSVVFLLVAVRQMVAANSAAGIWVPSTVSRGTWILCGIFVIVSAILLWLLVISRGWMEKFYF
Ga0116106_10419161	3300009645	Peatland	MAGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAEPSTGIWVASTVSRGTWILCGIFAIVSAILFWLLVISSGW
Ga0116130_12432751	3300009762	Peatland	MGGFSILTNRKRAVVALAYSVVFLLVAVRQMVAANSAAGIWIPSTVSRGTWILCGI
Ga0074046_104693902	3300010339	Bog Forest Soil	MAGFSILTNRKRAIVALVHSVVFLLIAVRQMVAANPAAGIWVPSTVSRGTWILCGIFSIVSAILLWLLLIS
Ga0074045_103722123	3300010341	Bog Forest Soil	MNDFTILTNRKRAMVALVHSIVFLLIASRQMIAARPAAGIWVPAAVSPGTWILCSIFVVVSAILMWLFAISRGWI
Ga0074045_110421261	3300010341	Bog Forest Soil	MDRFSILTNRRRAVVALVHSVVFLLIAVRQMVSANPAAGIWVASTVSRGTWVLCGVFAIV
Ga0074044_104750561	3300010343	Bog Forest Soil	MGGFSILTNRKRALVALVHSVVFLLIAVRQMIAANPAAGIWLPSTVSTGTWILCGILALVSAILLWLLIISRGWMEKSYFGFCTIS
Ga0074044_110093451	3300010343	Bog Forest Soil	MGGFSILTNRKRAIVALAHSVVFLLVAVRQMVAANPAAGIWLPSTVPTGTWILCGVFAI
Ga0136449_1000445151	3300010379	Peatlands Soil	MGEFSILTNRKRAMIALAHSVVFLLVAVRQLVAVNPATGIRLTSTVPPGTWILCGIFAIVSSILLGLLVISRGW
Ga0136449_1001429861	3300010379	Peatlands Soil	MAGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAQPSAGIWVASTVSRGTWILCGIFAIVSAILLWLLVISR
Ga0136449_1005216583	3300010379	Peatlands Soil	MGGFSILTNRKRAIVALVHSIVFLLIAVRQMVAANSAVGIWEPSTVSRGTWILCGVFAIVSGILLWLLVISRGWMEKI
Ga0136449_1040826622	3300010379	Peatlands Soil	MGNFTILTNRKRALVALVHSLVFLLIAFRQMIAASPAAGIWQPATVSTGTWILCFIFVVVSAILLWLYAIS
Ga0138578_10398431	3300011110	Peatlands Soil	MGGFSILTNRKRAIVALVHSVVFLMIAVRQMVATNPAAGIWVTSTVSRGTWILCGIL
Ga0181521_105241602	3300014158	Bog	MEDFSILTNRRRAVVALVHSVVFLLIAVRQMFAANPAVGIWVASTVSRGTWILCGIFAVVSSILFWLLLISRGWMERFYFGFC
Ga0181538_107378111	3300014162	Bog	MEDFSILTNRRRAVVALVHSVVFLLIAVRQMFAANPAAGIWVASTVSRGTWILCGIFVIVSSILFWL
Ga0181532_102227291	3300014164	Bog	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMLAANPAPGIWLPSRVHTGTWVLCGVFAVV
Ga0181531_100114193	3300014169	Bog	MNGFSILTNRKRAIVALAHSLVFLLIAVRQMVAATPAAGVWIRSTVRPGTWILCGIF
Ga0181536_101881001	3300014638	Bog	MSGFSILTNRRRAVVALVHSVVFLLIAVRQMMAANPAAGIWVSSTVSRGTWILCGIFAIVSSILLWLLLISRGWMEKFYFGFCTVSATSG
Ga0181522_100627171	3300014657	Bog	MEPFAILTNRKRAVVALAHSLLFLLIAVRQMVAATPALGVFMPSRVTTGTWI
Ga0181522_104860512	3300014657	Bog	MGGFSILTNRKRAVVALVHSVVFLLIAVRQMVAANPASGIWVPSTVPTGTWILCGVFAVVSSILLWLFVISRGWM
Ga0181515_10439562	3300016730	Peatland	MVNMGGFSILTNRKRAIVALVHSVVFLLVAVRQMVAANPTAGIWVASTVSRGTWILCGI
Ga0187818_103387241	3300017823	Freshwater Sediment	MGGFRILSNRKRAIVALVHTVVFLLIAVRQMAAGGPASGIWVPSTVSSGTWALCAIF
Ga0187856_12835262	3300017925	Peatland	MGGFSILTNRKRAVVALVHSIVFLLIAVRQMFAANPAAGIWVASAVSRGTWILCGIFVVVSSILLWLFVISRGWMERFYFGFCTISA
Ga0187801_101918441	3300017933	Freshwater Sediment	MGEFSILTNRKRAMIALVHSVVFLLVAVQQMVAVNPASGIRLASPVPPGTWILCGIFAIVSSVLLWLLLISRGW
Ga0187801_104539381	3300017933	Freshwater Sediment	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAATPAVGVWSPSTVRPGTWILCGIFVIVSSILLWLLIISTGWMEKFYF
Ga0187850_100239538	3300017941	Peatland	MGGFSILTNRKRAVVALVHSVVFLLIAVRQMVAANPASGIWVSATVSRATWILCGIFAVVSSVLLWLLVISRGWMEKFYFGFC
Ga0187850_101670161	3300017941	Peatland	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAANPAAGIWVSSTVSRGTWILCGI
Ga0187808_101619721	3300017942	Freshwater Sediment	MGGGFSILTNRKRAIIALVHSVVFLLIAVRQMVAAQPSAGIWVASTVSRGTWILCGIFAIVSAILLW
Ga0187819_100805021	3300017943	Freshwater Sediment	MGGFSILTNRKRAIIALAHSVVFLLIAVRQMVAANPAAGIWVASAVSRGTWILCGIFTIVSAILL
Ga0187819_105547921	3300017943	Freshwater Sediment	MGEFSILTNRKRAMIALVHSVVFLLVAVRQMVAVNPAVGIRLTSPVPSGTWILCAIFAIVSSILLWLLVISRGRMERFY
Ga0187879_100646492	3300017946	Peatland	MAGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAQPSTGIWVASTVSRGTWILCGIFAIVSAILFWLLVISSGWMEKFYFGF
Ga0187817_107988561	3300017955	Freshwater Sediment	MGEFAILTNRKRALVALVHSVVFLLIAFRQMIAASPAAGIWLPATVSTGTWILCSVF
Ga0187891_12394421	3300017996	Peatland	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAQPSTGIWVASTVSRGTWILCGIFAI
Ga0187891_12668791	3300017996	Peatland	MGGFSILTNRKRAVVALAHSVVFLLVAVRQMVAANSAAGIWVPSTVSRGTWILCGIFVIVSAILLWL
Ga0187868_13168521	3300018002	Peatland	MGGFSILTNRKRAVVALAHSVVFLLVAVRQMVAANSAAGIWVPSTVSRGTWILCGIFVIV
Ga0187865_10168351	3300018004	Peatland	MGGFSILTNRKRAVVALVHSVVFLLIALRQMIAARPAAGIWLPSTVSRGTWILCGIFVIVSSIL
Ga0187878_11167271	3300018005	Peatland	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAANPAAGIWVSSTVSRGTWILCGIFVIVSAILLWLLVISR
Ga0187866_13400001	3300018015	Peatland	MAGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAQPSEGIWVSSTVSRGTWILCGIFAIVSAILFWLLVISRGWM
Ga0187882_13470671	3300018021	Peatland	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAQPSAGIWVASTVSRGTWILCGIFAIVSAILFWLLVISSGWMEKFYFG
Ga0187885_101099761	3300018025	Peatland	MAGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAEPSTGIWVASTVSRGTWILCGIFAIVSAILFWLL
Ga0187857_102650901	3300018026	Peatland	MGGFSILTNRKRAVVALVHSVVFLLIALRQMIAARPAAGIWLPSTVSRGTWILCGIFVIVSSILLWLLLISRGWMEKFY
Ga0187875_101185944	3300018035	Peatland	MSGFSILTNRKRAVVALVHSIVFLLIAVRQMVAANPVAGIWVASTVSRGTWILCGIFA
Ga0187875_106594271	3300018035	Peatland	MEDFSILTNRRRAVVALVHSVVFLLIAVRQMFAANPAAGIWVASTVSRGTWILCGIFVIVSSILFWLLLISRGWMERFYFGFCTISATSG
Ga0187855_102163821	3300018038	Peatland	MGRFSILTNRKRAIVALVHSVVFLLIAVRQMVAATPADGVWAASTVRPGTWILC
Ga0187855_108771941	3300018038	Peatland	MGTFSILTNRKRAMVALAHSVVFLLVAVRQMVAANPVAGIWLPSTVSTGTWILCGIFAVVSSILLWLLLVSRGGMEKIYFGLCTISAVSG
Ga0187862_105131731	3300018040	Peatland	MGEFSILTNRKRAIVALVHSVVFLLIASRQMIAATPAVGIWLPSTVSTGTWILCTIFVIVSAILTWLFAIS
Ga0187887_100235034	3300018043	Peatland	MGTFSILTNRKRAIVALAHSVVFLLVAVRQMVAANPAAGIWLPSTVSIGTWILCGI
Ga0187858_100243296	3300018057	Peatland	MGGFSILTNRRRAVVALVHSVVFLVVAVRQMVAATPASGIWLPSTVRPGTWILCGIFGIVSS
Ga0187858_100406766	3300018057	Peatland	MVNMGGFSILTNRKRAIVALVHSVVFLLVAVRQMVAANPTAGIWVSSTVSRGTWILCGILAIVSTILLWLFVISR
Ga0187772_101744001	3300018085	Tropical Peatland	MRGFSILTNRKRAVVALVHSIVFLLIAVRQMLAATPIAGVWVPSTVKPGTWIVCGIFAIVSAILLWLLVIS
Ga0187769_106199782	3300018086	Tropical Peatland	MGDFAILTNRKRALVALVHSIVFLLIAFRQMLAAAPAAGIWVPAAVSTGTWVLCAIFAIVSA
Ga0187769_106733951	3300018086	Tropical Peatland	MGDFAILTNRKRALVALVHSIVFLLIAFRQMLAAAPAAGIWVPAAVSTGTWVLCAIFAIVSAILL
Ga0187769_107111972	3300018086	Tropical Peatland	MRAFSILTNRKRAIVALVHSVVFLLIAVRQMVAANPAAGIWVPATVETGTWVLCAI
Ga0187769_108276671	3300018086	Tropical Peatland	MSGFAILTNRKRAVVALIHSVVFLLIAFRQMIAASPALGLWSHAAVPAGTWALCAIFGIVSAILFWLFAISS
Ga0187770_110483691	3300018090	Tropical Peatland	MDDFAILTNRRRALVALVHSIVFLLIAFRQMLAAAPAAGIWVPSAVSTGTWILCVIFAI
Ga0187852_12784291	3300019082	Peatland	MGGFSILTNRKRAVVALAHSVVFLLVAVRQMVAANSAAGIWVPSTVSRGTWILCGIFVIVSAIL
Ga0210398_105302371	3300021477	Soil	MDEFSILTNRKRAIVALVHSFLFLVVALRQALAVSPAAGIWLVSSVPPSTWILCGIFAIVSAILLCLFA
Ga0224534_10800453	3300022524	Soil	MEDFSILTNRRRAVVALVHSVVFLLIAVRQMFVANPAAGIWVASTVSRGTWILCGIFVVVSSILFWLLLISRGWMEKFYFGFCTISATSGLL
Ga0224523_11522011	3300024238	Soil	MGGFSILTNRKRAVVALVHSVVFLLIAVRQMFAANPAAGIWVASTVSRGTWILCGILVVVSSILLWLLLISRGWLEKF
Ga0208691_10448851	3300025612	Peatland	MSGFSILTNRKRAVVALVHSGVFLLIALRQMLAPNPAAGLWSPGKVAWGTWILCGVFVVVSAIL
Ga0207926_11071741	3300025619	Arctic Peat Soil	MGGFSILTNRKRAIVALVHSVVFLLVAVRQMLAAQPAAGIWVLSTVSRGTWIL
Ga0207700_116886701	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSGFSILTNRKRAIVALLHSVVFLLIAVRQMVATSPAAGVWLPSTVRPGTWILCGIFAV
Ga0257160_10861241	3300026489	Soil	MGGFSILTNRKRAIVALAHSVIFLLIAVRQMVAAQPAAGIRVLSTVSPGTWILCGILVLVSA
Ga0209905_10402151	3300027634	Thawing Permafrost	MGGFSILTNRKRAVVALVHSVVFLLIAVRQMFAANPAAGIWVASTVSRGTWILCGILVVVSSILLWLLLKMCIRDRKYHARSPF
Ga0209446_11186351	3300027698	Bog Forest Soil	MGGFSILTNRKRAIVALLHSVVFLLIAVRQMMAANPAAGVWVATTVSRGTWILCGIFAIVSAILLWMLVFSSGWME
Ga0209908_101404082	3300027745	Thawing Permafrost	RMGTFSILTNRKRAMVALAHSVVFLLVAVRQMVAANPVAGICLPSTVSTGTWILCGIFAVVSSILLWLLLVSRGGMEKIYFGLCLSLIHI
Ga0209040_103510881	3300027824	Bog Forest Soil	MGDFTILTNRKRALVALVHSAVFLLLAFRQMVAASPAPGIWAPAVVSPGTWVLCLIYLIVSAILLWLFAVSRGAMEKLYFGMCGV
Ga0265326_101784022	3300028558	Rhizosphere	MSGFSILTNRKRAVVALAHSVVFLLIAVRQMVAANPAAGLWAVSTVPRGTWML
Ga0302156_101401281	3300028748	Bog	MGGFSILTNRKRAVVALVHSIVFLLIAVRQMVAATPAAGVWLASAVRPGTWILCGIFTIVSSILLRLLIISR
Ga0302278_104458241	3300028866	Bog	MGGFSILTNRKRAVVALVHSIVFLLIAVRQMVAATPAAGVWLASAVRPGTWILCGIFTIVSSILLRLLIISRGWMEKFYFA
Ga0247275_10126751	3300029817	Soil	MGGFSILTNRKRAIVALVHSVVFLLIAVRQMVAAQPSAGIWVASTVSRGTWILCGIFAVVSAILFWLLVISR
Ga0311326_100813062	3300029917	Bog	MKRALPPSPTTRVIYVTASSPLIRYSIVRMSGFSILTNRKRAIVALAHSLVFLLIAVRQMVAATPAAGVWITSAVRPGTWILCGIFAIVSSILLWLLIISRG
Ga0311326_100907883	3300029917	Bog	MVGFSILTNRKRAIVALVHSAVFLLIAVRQMVAATPAPGVWVPSIVRPGTWILCGIFAIVSSILLWLFAISRGWM
Ga0311363_100229651	3300029922	Fen	MGGFSILTNRKRAVVALVHSIVFLLIAVRQMVAATPAAGVWLASAVRPGTWILCGIFTIVSSILLW
Ga0311344_107054582	3300030020	Bog	MKRALPPSPTTRVIYVTASSPLIRYSIVRMSGFSILTNRKRAIVALAHSLVFLLIAVRQMVAATPAAGVWITSAVRPGTWILCGIFAI
Ga0311353_117051951	3300030399	Palsa	MGGFSILTNRKRAIVALAHSVVFLLVAVRQMVAANPTAGIWAASAVSRGTWVLCGIFALVSAILLWL
Ga0302194_103218322	3300030506	Bog	MVGFSILTNRKRAIVALVHSAVFLLIAVRQMVAATPAPGVWVPSIVRPGTWILCGIFAIVSSILLWLFAIS
Ga0310039_101856201	3300030706	Peatlands Soil	MGEFSILTNRKRAMIALVHSVVFLLVAVRQLVAVNPATGIRLTSTVPPGTWILCGIFAI
Ga0310038_101621211	3300030707	Peatlands Soil	MGGFSILTNRKRAIVALVHSIVFLLIAVRQMVAAYSAAGIWEPSTVSRGTWILCGVFAIVSG
Ga0310038_104957922	3300030707	Peatlands Soil	MPGYFGTVQSRMGGFSILTNRKRAIVALAHSVVFLMVAVQQMVAANPAAGIWLPSAVPRSTWILCGIFA
Ga0311366_116880342	3300030943	Fen	MGEFAILTNRKRAIVALVHSVIFLLIAARQMQVSAPAAGIWIPSAVTSGTWVLCLVYC
Ga0302308_108453892	3300031027	Palsa	MYVTASSPLIRYSILSMDGFSILTNRKRAIVALAHSLVFLLIAVRQMVATTPAAGVWIRSAVRPGTWILCGIFAIVSSILLWLLIISR
Ga0170824_1042522362	3300031231	Forest Soil	MGGFSILTNRKRAIVALVHSVIFLLIAVRQMVAAQPAAGIWILSTVSPGTWILCGILALVSAILLWLFSISRGWM
Ga0311301_107242661	3300032160	Peatlands Soil	MGGFSILTNRKRAIVALVHSIVFLLIAVRQMVAANSAVGIWEPSTVSRGTWILCGVFAIVSGILLWLLVIS
Ga0335082_117210401	3300032782	Soil	MDEFAILTNRKRAMVALAHTVVFLGIAVRQFVVAAPAAGIWAPATVSVGTWSLCAIYALVSGILLWLFSISRGL
Ga0335070_102746002	3300032829	Soil	MGEFSILTNRKRAIIALGHSIAFLLIATRQMLSASPAFGIWIPSKVTAGTWILCAVYA
Ga0334847_001248_1993_2208	3300033826	Soil	MGGFSILTNRKRAIVALVHSVVFLLLAVRQMVAANPAAGIWVSSTVSRGTWILCGIFTTVSAILLWLFVISR
Ga0370501_0197494_526_708	3300034195	Untreated Peat Soil	MGGFSILKNRKRAVVALVHSVVFLLIAVRQMVAAVPAPGIWNLPTVRTGTWILCGIFVVV
Ga0370514_106760_2_214	3300034199	Untreated Peat Soil	MNGFSILTNRKRAIVALAHSLVFLLIAVRQMVAATPAAGVWITSAVRPGTWILCGIFAIVSSILLWLLIIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089185

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences