Metagenome / Metatranscriptome Family F089182

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089182
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	60 residues
Representative Sequence	EPVTGSYRVGTDCRGTATITPKGQPEMHFSFVVVDCGKELLAIETDADTVVSGTLVKGN
Number of Associated Samples	91
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	96.33 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.211 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.761 % of family members)
Environment Ontology (ENVO)	Unclassified (42.202 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.74% Coil/Unstructured: 71.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF12867	DinB_2	0.92
PF02738	MoCoBD_1	0.92
PF01344	Kelch_1	0.92
PF08282	Hydrolase_3	0.92
PF16153	DUF4861	0.92
PF00578	AhpC-TSA	0.92
PF05853	BKACE	0.92
PF13185	GAF_2	0.92
PF02369	Big_1	0.92
PF00756	Esterase	0.92
PF00067	p450	0.92
PF05163	DinB	0.92
PF02737	3HCDH_N	0.92
PF07238	PilZ	0.92
PF13007	LZ_Tnp_IS66	0.92
PF00873	ACR_tran	0.92
PF13620	CarboxypepD_reg	0.92
PF13570	PQQ_3	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.92
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.92
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.92
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.92
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.92
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.92
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.92
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.92
COG2124	Cytochrome P450	Defense mechanisms [V]	0.92
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.92
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.92
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.21 %
Unclassified	root	N/A	46.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.21 %
Unclassified	root	N/A	46.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.21 %
Unclassified	root	N/A	46.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	19.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.92 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.92 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	19.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.92 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.92 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	19.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Cystobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter	0.92 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.92 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.79 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	19.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.26 %
Cystobacter fuscus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	0.92 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.92 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10128111	All Organisms → cellular organisms → Bacteria → Proteobacteria	1277	Open in IMG/M
3300004080\|Ga0062385_11210393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	517	Open in IMG/M
3300004091\|Ga0062387_101744807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	507	Open in IMG/M
3300004092\|Ga0062389_100635069	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300004092\|Ga0062389_102922071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	639	Open in IMG/M
3300004479\|Ga0062595_102703061	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300004635\|Ga0062388_101108934	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300004635\|Ga0062388_101203390	Not Available	750	Open in IMG/M
3300005533\|Ga0070734_10180170	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300005602\|Ga0070762_10344733	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300005764\|Ga0066903_101138969	Not Available	1442	Open in IMG/M
3300005921\|Ga0070766_11248639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	514	Open in IMG/M
3300006176\|Ga0070765_101337060	Not Available	676	Open in IMG/M
3300007982\|Ga0102924_1227062	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	788	Open in IMG/M
3300009521\|Ga0116222_1348055	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300009623\|Ga0116133_1023647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1519	Open in IMG/M
3300009623\|Ga0116133_1153767	Not Available	604	Open in IMG/M
3300009623\|Ga0116133_1180870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	562	Open in IMG/M
3300009636\|Ga0116112_1203666	Not Available	549	Open in IMG/M
3300009637\|Ga0116118_1099613	Not Available	976	Open in IMG/M
3300009637\|Ga0116118_1188767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	651	Open in IMG/M
3300009638\|Ga0116113_1040089	Not Available	1069	Open in IMG/M
3300009644\|Ga0116121_1244701	Not Available	573	Open in IMG/M
3300009646\|Ga0116132_1278321	Not Available	510	Open in IMG/M
3300009683\|Ga0116224_10534722	Not Available	559	Open in IMG/M
3300009700\|Ga0116217_10940256	Not Available	530	Open in IMG/M
3300009839\|Ga0116223_10093419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1908	Open in IMG/M
3300010343\|Ga0074044_11057516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300010397\|Ga0134124_10721650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	988	Open in IMG/M
3300011271\|Ga0137393_11659952	Not Available	528	Open in IMG/M
3300012923\|Ga0137359_11396862	Not Available	588	Open in IMG/M
3300014160\|Ga0181517_10624409	Not Available	538	Open in IMG/M
3300014162\|Ga0181538_10473111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	662	Open in IMG/M
3300014165\|Ga0181523_10729497	Not Available	541	Open in IMG/M
3300014654\|Ga0181525_10742259	Not Available	552	Open in IMG/M
3300017925\|Ga0187856_1230331	Not Available	660	Open in IMG/M
3300017931\|Ga0187877_1286469	Not Available	631	Open in IMG/M
3300017933\|Ga0187801_10218773	Not Available	758	Open in IMG/M
3300017938\|Ga0187854_10129348	Not Available	1160	Open in IMG/M
3300017942\|Ga0187808_10085491	All Organisms → cellular organisms → Bacteria → Acidobacteria	1362	Open in IMG/M
3300017946\|Ga0187879_10180359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1187	Open in IMG/M
3300017946\|Ga0187879_10430500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	731	Open in IMG/M
3300017955\|Ga0187817_10956016	Not Available	548	Open in IMG/M
3300017966\|Ga0187776_11630664	Not Available	500	Open in IMG/M
3300017970\|Ga0187783_10824929	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300017970\|Ga0187783_10860737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300017975\|Ga0187782_10150765	Not Available	1729	Open in IMG/M
3300017975\|Ga0187782_10788254	Not Available	735	Open in IMG/M
3300018001\|Ga0187815_10451057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	549	Open in IMG/M
3300018006\|Ga0187804_10121478	Not Available	1085	Open in IMG/M
3300018007\|Ga0187805_10375357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	659	Open in IMG/M
3300018008\|Ga0187888_1147992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	963	Open in IMG/M
3300018015\|Ga0187866_1011545	All Organisms → cellular organisms → Bacteria → Acidobacteria	4979	Open in IMG/M
3300018017\|Ga0187872_10294151	Not Available	712	Open in IMG/M
3300018023\|Ga0187889_10442060	Not Available	559	Open in IMG/M
3300018030\|Ga0187869_10247000	Not Available	865	Open in IMG/M
3300018038\|Ga0187855_10034200	All Organisms → cellular organisms → Bacteria	3237	Open in IMG/M
3300018086\|Ga0187769_10573883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300019082\|Ga0187852_1448137	Not Available	500	Open in IMG/M
3300019240\|Ga0181510_1472462	Not Available	563	Open in IMG/M
3300019258\|Ga0181504_1308308	Not Available	867	Open in IMG/M
3300021170\|Ga0210400_10678790	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300021171\|Ga0210405_10417603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1056	Open in IMG/M
3300021171\|Ga0210405_10582755	Not Available	872	Open in IMG/M
3300021181\|Ga0210388_10787146	Not Available	825	Open in IMG/M
3300021402\|Ga0210385_10389778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1045	Open in IMG/M
3300021402\|Ga0210385_10939648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	664	Open in IMG/M
3300021406\|Ga0210386_10728492	Not Available	854	Open in IMG/M
3300021406\|Ga0210386_11396151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	587	Open in IMG/M
3300021407\|Ga0210383_11018165	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300021407\|Ga0210383_11226627	Not Available	629	Open in IMG/M
3300021433\|Ga0210391_11549118	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300021474\|Ga0210390_10287410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1393	Open in IMG/M
3300021478\|Ga0210402_11605825	Not Available	577	Open in IMG/M
3300022522\|Ga0242659_1104185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	564	Open in IMG/M
3300025404\|Ga0208936_1047327	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300025444\|Ga0208189_1099751	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300025506\|Ga0208937_1054442	Not Available	934	Open in IMG/M
3300025612\|Ga0208691_1105872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	634	Open in IMG/M
3300025931\|Ga0207644_10644369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300026294\|Ga0209839_10186203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	672	Open in IMG/M
3300027745\|Ga0209908_10238821	Not Available	509	Open in IMG/M
3300027825\|Ga0209039_10311781	Not Available	618	Open in IMG/M
3300027905\|Ga0209415_10580439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	837	Open in IMG/M
3300028015\|Ga0265353_1027412	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300028780\|Ga0302225_10301278	Not Available	760	Open in IMG/M
3300028906\|Ga0308309_10219075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1578	Open in IMG/M
3300029882\|Ga0311368_10087383	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300029999\|Ga0311339_10002121	All Organisms → cellular organisms → Bacteria	34514	Open in IMG/M
3300030057\|Ga0302176_10068936	Not Available	1367	Open in IMG/M
3300030490\|Ga0302184_10039483	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300030580\|Ga0311355_10440390	Not Available	1265	Open in IMG/M
3300030580\|Ga0311355_10848954	Not Available	834	Open in IMG/M
3300030617\|Ga0311356_11852160	Not Available	536	Open in IMG/M
3300031234\|Ga0302325_11029688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300031234\|Ga0302325_11733331	Not Available	787	Open in IMG/M
3300031236\|Ga0302324_100342094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	2266	Open in IMG/M
3300031236\|Ga0302324_101107820	Not Available	1064	Open in IMG/M
3300031718\|Ga0307474_10226738	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300031823\|Ga0307478_10891060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	744	Open in IMG/M
3300031954\|Ga0306926_12891387	Not Available	516	Open in IMG/M
3300031962\|Ga0307479_11139580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300032805\|Ga0335078_10169631	All Organisms → cellular organisms → Bacteria	3066	Open in IMG/M
3300032805\|Ga0335078_10753161	Not Available	1196	Open in IMG/M
3300033433\|Ga0326726_11039160	Not Available	796	Open in IMG/M
3300033828\|Ga0334850_003446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3677	Open in IMG/M
3300033829\|Ga0334854_097345	Not Available	704	Open in IMG/M
3300034124\|Ga0370483_0175023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.88%
Aquatic	Environmental → Aquatic	42.20%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.12%
Freshwater	Environmental → Aquatic → Freshwater	41.28%
Peat	Environmental → Terrestrial → Peat	13.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	41.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.01%
Loam	Environmental → Terrestrial → Soil → Loam	4.59%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	23.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.76%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	11.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.01%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_101281112	3300004080	Bog Forest Soil	PVTGHYRVGTDCRGTATVTPKGQPEMHFSFVVVDSGKELLAIETDADAAVSGTLQRQSQQETAH*
Ga0062385_112103932	3300004080	Bog Forest Soil	TFAEEPVTGSYRVGTDCRGTATITPKGLSEMHFSLMVVDCGKEMLAIETDADTVVSGTLVKGN*
Ga0062387_1017448071	3300004091	Bog Forest Soil	EPVTGSYRVGTDCRGTATITPKGLSEMHFSLMVVDCGKEMLAIETDADTVVSGTLVKGN*
Ga0062389_1006350692	3300004092	Bog Forest Soil	TFEPVTGAFKVGPDCTGWATVKAKGLPEMRFHLVVVDGEKEMLVIETDADTIVSGTLVKGD*
Ga0062389_1029220711	3300004092	Bog Forest Soil	AEEPVTGSYRVGADCKGAATITPKGQSEMHFRVVVVDGGNEMLAIETDADTVVSGTLQR*
Ga0062595_1027030611	3300004479	Soil	DGTFLTFAEEPVTGSYTIANNCRGRAIITPKGRPAMHFSLVVVDGGNEMLVVETDADTVVSGTLQR*
Ga0062388_1011089343	3300004635	Bog Forest Soil	SEDGTFLTFEPVTGSYSVGRDCRGRATITPKGHSEMHFGLVVVDGGNEMLVIEKDADTVVSGTPQR*
Ga0062388_1012033901	3300004635	Bog Forest Soil	GSYRVGTDCRGRATITPKGQSEMHFSLVIVDDGKEMLAVETDADTVVSGTLVKAIK*
Ga0070734_101801701	3300005533	Surface Soil	LTFAEEPVSGSYFVSPDCRGQATIRAKGLSEMHLQFVVVVGGNELLAVETDPHTVVSGTLQR*
Ga0070762_103447333	3300005602	Soil	TLAEEPVTGSYTVDRDCKGTATITPKGQPEMHFSFVVVDCGKELLAVETDADTVVSGTLVKRN*
Ga0066903_1011389691	3300005764	Tropical Forest Soil	SEDGTFTQEHVTGSYRVAKDCTGRATITPKGRPEMHFSLVVVNDGNEMLAVETDADTVVSGTLQR*
Ga0070766_112486391	3300005921	Soil	EEPVTGSYSVDANCKGTLTITPKGESALNFSFVIVDGGKEMLAIETDADTVVTATLQR*
Ga0070765_1013370602	3300006176	Soil	DANCKGTLTITPKGESALNFSFVIVDSGKEMLAIETDANTVVTATLQQ*
Ga0102924_12270621	3300007982	Iron-Sulfur Acid Spring	VTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN*
Ga0116222_13480551	3300009521	Peatlands Soil	AEEPVTGSYKVDRDCRGTATITPKGHSEMHFSLVVVDCGREMLAIETDADTVVSGTLVKGN*
Ga0116133_10236473	3300009623	Peatland	PVTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN*
Ga0116133_11537671	3300009623	Peatland	PVTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLALETDADTAVIGTLVKDN*
Ga0116133_11808701	3300009623	Peatland	TGSYSVDANCKGTLTVTPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN*
Ga0116112_12036661	3300009636	Peatland	TFAEEPVTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQR*
Ga0116118_10996131	3300009637	Peatland	MARFLTFAEEPVTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQR*
Ga0116118_11887671	3300009637	Peatland	EEPVTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN
Ga0116113_10400892	3300009638	Peatland	TFAEEPVTGSYMVGTDCRGTATITPKGQSPLNFSVVVVDGGKEMLAIETDANTIVSGTLQR*
Ga0116121_12447011	3300009644	Peatland	EEPVTGSYKVDPDCRGWASIKPKGLPEMRFHLVVVDGGKEMLAVETDADTVVSGTLVKGN
Ga0116132_12783211	3300009646	Peatland	SYRVGTDCRGTATITPKKQPEMHFSFVVVDCGKELLAVETDADTVVSGTLVKGN*
Ga0116224_105347222	3300009683	Peatlands Soil	EEPVTGSYKVDRDCRGTATITPEGQPEMHFSFVVVDCGKELLAVETDADSVVKGTLVKND
Ga0116217_109402561	3300009700	Peatlands Soil	EEPVTGSYAVDPDCRGRATIKPKGLPEMRFHLVVVDGGKEMLAIETDANTVVSGTLVKGN
Ga0116223_100934193	3300009839	Peatlands Soil	LTFAEEPVTGSYRVGTDCRGTATITPKGQPEMHFSFVVVDCGKELLAVETDADSVVKGTLVKND*
Ga0074044_110575161	3300010343	Bog Forest Soil	TGSYKVDRGCRGTATITPKGHSEMHFSFVVVDCGKEMLAIETDADTVVSGTLQR*
Ga0134124_107216503	3300010397	Terrestrial Soil	FLTFAEEPVTGSYTIANNCRGRAIITPKGRPAMHFSLVVVDGGNEMLVVETDADTVVSGTLQR*
Ga0137393_116599522	3300011271	Vadose Zone Soil	EPVTGSYTVAKNCRGRATITPKGRSEMHFSLVVVDGGNEMLAVETDANTVVSGTLVKGN*
Ga0137359_113968621	3300012923	Vadose Zone Soil	FLTFEPVTGSYRVGTDCRGRATIRPKGFPEMRFHLVVVDGGKEMLAIETDADTVVSGTLVKGN*
Ga0181517_106244092	3300014160	Bog	VDANCKGTLTITPKGESVLNFSFVIVDCGKEMLALETDADTAVIGTLVKDN*
Ga0181538_104731112	3300014162	Bog	ADEPVTGSYKVDEDCRGTATITPKGQPDMHFSFVVVDCGKELLAVETDADAAVSGTLVKSN*
Ga0181523_107294971	3300014165	Bog	SVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLALETDADTAVIGTLVKDN*
Ga0181525_107422592	3300014654	Bog	SYSVDANCKGTLTITPKGESALNFSFVIVDCGKEMLALETDADTAVIGTLVKDN*
Ga0187856_12303311	3300017925	Peatland	MARFLTFAEEPVTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQR
Ga0187877_12864691	3300017931	Peatland	AEEPVTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQR
Ga0187801_102187731	3300017933	Freshwater Sediment	FLTFAEEPVTGSYTVARDCRGRATITPKGRSEMHFRLVIVDGGHEMLAVETDANTVVSGSLEKNDLLQSF
Ga0187854_101293481	3300017938	Peatland	TFAEEPVTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQ
Ga0187808_100854912	3300017942	Freshwater Sediment	TKAPVTGSYSVNADCTGTATITPKGQSPLNFSFVVVDGGKEMLAIETDADTVVSGTLQR
Ga0187879_101803592	3300017946	Peatland	PVTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLALETDADTAVIGTLVKDN
Ga0187879_104305002	3300017946	Peatland	PVTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN
Ga0187817_109560162	3300017955	Freshwater Sediment	VTGSYKVATDCRGTATITPKGRSEMHFSLVVVDDGKQLLAIETDPDTVVSGTLQH
Ga0187776_116306641	3300017966	Tropical Peatland	IFTFAEEPVTGSYKVHANCTGKATITPEGKPELNFSFVIVDDGNEMLAIETDADTVVSGTLQR
Ga0187783_108249291	3300017970	Tropical Peatland	GSYTVDSDCRGTATITPKGKSALNFSFVVVDLGKEMLAIETDADTVVSGTLQRQFR
Ga0187783_108607372	3300017970	Tropical Peatland	FAEEPVTGSYTVDPDCRGTATITPEGRSEMHYSFVVVDGGKELLIIETDPDTVVSGTLQR
Ga0187782_101507651	3300017975	Tropical Peatland	STTLAEDPVTGSYTVGTDCRGTAAITPKGLPEMHFSFVVADCGKELLAVETDADTVVSGTLQR
Ga0187782_107882542	3300017975	Tropical Peatland	EPVTGSYSFATDCTGTATITPKGKSALNFSFVVVDWGKEMLAIETDADTVVSGTLQHEFQEEMSH
Ga0187815_104510572	3300018001	Freshwater Sediment	DGTILTFADEPVTGSYKVDKDCRGTATITPQGQPEMHFSFVVVDCGKELLAIETDADAAVTGTLVKNN
Ga0187804_101214782	3300018006	Freshwater Sediment	AEEPFTGSYKVAKDCRGTATITPKGHSEMHFSLVVVDGGNQMLAVETDADTVVSGTLQR
Ga0187805_103753572	3300018007	Freshwater Sediment	ILTFADEPVTGSYKVDKDCRGTATITPQGQPEMHFSFVVVDCGKELLAIETDADAAVTGTLVKNN
Ga0187888_11479921	3300018008	Peatland	TTFAEEPVTGSYRVGTDCRGRATITPKGLSEMHFSLVVVDGGNRMLGIETDADTVVSGTLVKGN
Ga0187866_10115456	3300018015	Peatland	PVTGSYKVGPDCRGTATITPRGQPEMHFSFVVVDCGKELLAIETDADAAVSGTLVKRN
Ga0187872_102941512	3300018017	Peatland	VDANCKGTLTITPKGESVLNFSFVIVDCGKEMLALETDADTAVIGTLVKDN
Ga0187889_104420601	3300018023	Peatland	ARMARFLTFAEEPVTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQR
Ga0187869_102470002	3300018030	Peatland	LTFAEEPVTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLALETDADTAVIGTLVKDN
Ga0187855_100342001	3300018038	Peatland	TFAEEPVTGSYKVDRDCWGTATITPKGQPEMHFSFVVVDCGKELLAVETDADSVVSGTLVKGN
Ga0187769_105738831	3300018086	Tropical Peatland	TLTFAPVTGSYTVDTDCTGTATITPKGQSALNFSFVVVDWGKEMLAIETDADTVVSGTLQRSKE
Ga0187852_14481371	3300019082	Peatland	VTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQR
Ga0181510_14724621	3300019240	Peatland	ANCKGTLTITPKGESVLNFSFVIVDCGKEMLALETDADTAVIGTLVKDN
Ga0181504_13083081	3300019258	Peatland	TTLTFAEEPVTGSYRVGADCRGRATIRPKGLSEMHFSLVVVDGGNGMLGIETDADTVVSATLQR
Ga0210400_106787901	3300021170	Soil	SYTVDRDCKGTATITPKGQPEMHFSFVVVDCGKELLAVETDADTIVSGTLAKRD
Ga0210405_104176033	3300021171	Soil	ILTFAEEPVTGSYKVDKDCRGTATITPKGQPEMHFSFVVVDCAKELLAVETDADTVVSGTLVKRD
Ga0210405_105827552	3300021171	Soil	TGSYKVDRDCRGTATITPKGQPEMHFSFVVVDCGKELLAVQTDADAVVTGTLVKRN
Ga0210388_107871461	3300021181	Soil	TILTFAEEPVTGFYSVDANCKGTLTITPKGESALNFSFVIVDSGKEMLAIETDANTVVTATLQQ
Ga0210385_100624891	3300021402	Soil	NCKGTLTITPKGESALNFSFVIVDGGKEMLAIETDADTVVTATLQR
Ga0210385_103897783	3300021402	Soil	VDANCKGTLTITPKGESVLNFSFVIVDCGKEMLAIETDADTVVNGTLVKRN
Ga0210385_109396481	3300021402	Soil	AEEPVTGSYKVDRDCRGTATITPKGQPEMHFSFVVVDCGKELLAVQTDADAVVTGTLVKR
Ga0210386_107284923	3300021406	Soil	TGFYSVDANCKGTLTITPKGESALNFSFVIVDGGKEMLAIETDADTVVTATLQQ
Ga0210386_113961512	3300021406	Soil	VTGSYKVDRDCRGTATITPKGQPEMHFSFVVVDCGKELLAVQTDADAVVTGTLVKRN
Ga0210383_110181651	3300021407	Soil	SYSIDANCKGTLTITPKGESALNFSVVIVDRGKEMLAIETDADTAVTATLQR
Ga0210383_112266271	3300021407	Soil	GTILTFAEEPVTGSYSVDANCKGTLTITPKGESALNFSFVLVDSGKEMLAIETDADTVVTGTLQR
Ga0210391_115491181	3300021433	Soil	ILTFAEEPVTGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN
Ga0210390_102874101	3300021474	Soil	GSYSVDASCKGTLTITPKGESILNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN
Ga0210402_116058251	3300021478	Soil	SYTIGRDCRGTATIAPKGQAEMHLSLVVVDGGKEMLAIETDAGTIVSGTLQQ
Ga0242659_11041852	3300022522	Soil	TTLAEEPVTGSYTVDRDCKGTATITPKGQPEMHFSFVVVDCAKELLAVETDADTVVSGTLVKRD
Ga0208936_10473272	3300025404	Peatland	SSEGGTFLTFAEEPVTGSYMVGTDCRGTATITPKGQSPLNFSVVVVDGGKEMLAIETDANTIVSGTLQR
Ga0208189_10997511	3300025444	Peatland	EPVTGSYRVGTDCRGTATITPKGQPEMHFSFVVVDCGKELLAIETDADTVVSGTLVKGN
Ga0208937_10544421	3300025506	Peatland	RFLTFAEEPVTGSYSVDANCTGTLTITPEGESALNFSFVIVDCGKEMLAIETDADTVVSGTLQR
Ga0208691_11058721	3300025612	Peatland	TGSYSVDANCKGTLTITPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN
Ga0207644_106443692	3300025931	Switchgrass Rhizosphere	EEPVTGSYTIAKNCKGRATITPKGRSDMHFSLVVVDGGNEMLAVETDAGTVVSGTLQR
Ga0209839_101862032	3300026294	Soil	TFADEPVRGSYSVDANCRGTATITPNWHSEMHFSLVVVDCGKELLAVETDADTVVSGTLVKGN
Ga0209908_102388211	3300027745	Thawing Permafrost	EEPVTGSYWVTPDCRGGATITPKGQSEMHFRFAVVDGGNEMLAIETDPDTVVSGTLQR
Ga0209039_103117811	3300027825	Bog Forest Soil	AEEPVTGSYSVDANCKGTLTITPNGESALNFSFVIVDCGKEMLALETDADTAVIGTLVKD
Ga0209415_105804391	3300027905	Peatlands Soil	TTLTFAPVTGSYRVGTDCRGMATITPKGQPEMHFSFVVVDCGKEMLAVETDADTVVSGTLVKGN
Ga0265353_10274121	3300028015	Soil	NCKGTLTITPKGESVLNFSFVIVDCGKEMLAVETDADTVVNGTLVKRN
Ga0302225_103012781	3300028780	Palsa	EEPVTGSYRVGTDCRGTATITPKGQPEMHFSFVVVDCGKELLAIETDADTVVSGTLQRQSEQEMSQ
Ga0308309_102190752	3300028906	Soil	SENGTILTFAEEPVTGSYSVDANCKGTLTITPKGESALNFSFVLVDSGKEMLAIETDADTVVTGTLQR
Ga0311368_100873833	3300029882	Palsa	LTFAPVTGSYTVDKDCRGRATITPKGRSEMHFSLVVVDGGKEMLAIETDADTVVSGTLASTSPRRSSWEP
Ga0311339_1000212121	3300029999	Palsa	MLKRSQREPVTGSYKVDRDSRGRLPKGHSEMHFKLVVVDCGKEMLAIETDADTVVSGTLVKGN
Ga0302176_100689362	3300030057	Palsa	SYTVDKDCRGRATILPMGGSEMHFSLVVVDGGKEMLAVETDADTVVSGTVVDARRRHVTRFSGD
Ga0302184_100394831	3300030490	Palsa	GTYSVAPDCTGTATITPKNKPALNFSFVVVNGGTEMLAIETDADTVVSATLQQ
Ga0311355_104403901	3300030580	Palsa	GSYRVGTDCRGTATITPKGQPQMHFSFVVVDCGKELLAIETDADTVVSGTLQRQSEQEMS
Ga0311355_108489541	3300030580	Palsa	LKRSQREPVTGSYKVDRDSRGRLPKGHSEMHFKLVVVDGGNKILAIETDADTVVSGTLVKGD
Ga0311356_118521601	3300030617	Palsa	LTFAPVTGSYTVDKDCRGRATITPKGRSEMHFSLVVVDGGKDMLAIETDADTVVSGTLASTSPRRSSWEP
Ga0302325_110296881	3300031234	Palsa	SSEGGTFLTFAEEPVTGSYMVGTDCRGTATITPKGQSPLNFSFVVVDGGKEMLAIETDANTIVSGTLQR
Ga0302325_117333311	3300031234	Palsa	PVTGSYRVGTDCRGTATITPKGQPQMHFSFVVVDCGKELLAIETDADTVVSGTLQRQSEQEMSQ
Ga0302324_1003420941	3300031236	Palsa	TGSYWVTPDCRGGATITPKGQSEMHFRFAVVDGGNEMLAIETDPDTVVSGTLQR
Ga0302324_1011078201	3300031236	Palsa	EEPVTGSYSVGTDCRGWATIKPKGLSDMHFSLVVVDGGKEMLAIETDANTVVSVTLVKGN
Ga0307474_102267382	3300031718	Hardwood Forest Soil	SYKIDRDCRGTATITPKGHSEMHFSLVVVDCGKQMLAIETDADTVVSGTLQR
Ga0307478_108910601	3300031823	Hardwood Forest Soil	DGTILTFAEEPVTGSYKVDKDCRGTATITPKGQPEMHFSFVVVDCGKELLAVQTDADAVVSGTLVKRD
Ga0306926_128913872	3300031954	Soil	IDTFAGDPVTGSYTVDTNCWGKATITPKGRSDMHFNFLVTDNGKQILAIETDANTVLSGTLVKGKPD
Ga0307479_111395801	3300031962	Hardwood Forest Soil	TGSYRVDRDCRDTATITPKGHSEMHVSLVAVDCGKEMLAIETDADTVVSGTLVKGN
Ga0335078_101696311	3300032805	Soil	SYRVDKDCRGTATIRPKGQPEMHFSFVVVDCGKELLAIETDADAAISGTLQRQVQQETSHWER
Ga0335078_107531611	3300032805	Soil	TFAEEPVLGSYTVASDCTGTATIQTKGGSVARFSLVVVDGGKEMLAIETDTDTVVSGTLAKGN
Ga0326726_110391603	3300033433	Peat Soil	TFLTFAQEPVTGSYRVAKDCRGRATITPKGHPEMHFRLVVVNDGNEILAVETDADTVVSGTLQR
Ga0334850_003446_3_170	3300033828	Soil	VTGSYTVAPDCRGRVIITPTGLSEMRFSVVIVDGGKEMLAVETDAGTVVSGTFQR
Ga0334854_097345_529_702	3300033829	Soil	RVGTDCRGRATITPTGLSEMHFKLVVVDGGNKILAIETDADTVVSGTLENNDLLQSF
Ga0370483_0175023_2_199	3300034124	Untreated Peat Soil	GTFLTFAEEPVTGSYMVGTDCRGTATITPKGQSPLNFSFVVVDGGKEMLAIETDANTIVSGTLQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089182

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences