Metagenome / Metatranscriptome Family F089178

Basic Information
Family ID	F089178
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	80 residues
Representative Sequence	SQIHNDMLRIDNPPAYFNLSVNVVQPGHGAGLGLIYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYASVPAR
Number of Associated Samples	91
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (37.615 % of family members)
Environment Ontology (ENVO)	Unclassified (49.541 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.541 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122. 1Ga0062386_1013498491 2Ga0075019_106776632 3Ga0070765_1016997022 4Ga0073936_104812481 5Ga0116117_11793641 6Ga0116113_11961531 7Ga0116101_10655512 8Ga0181517_102518181 9Ga0181528_102974192 10Ga0181534_102442562 11Ga0182010_101484813 12Ga0182014_102696531 13Ga0182014_105785751 14Ga0182016_101651762 15Ga0182015_102444503 16Ga0182011_106752241 17Ga0182024_118060741 18Ga0181516_102268601 19Ga0187854_102459701 20Ga0187884_101282672 21Ga0187883_101634031 22Ga0187851_103851841 23Ga0182022_11593052 24Ga0182025_13044372 25Ga0182031_10393681 26Ga0182031_11436732 27Ga0224534_10150472 28Ga0224520_10328711 29Ga0207927_10936872 30Ga0208691_11503161 31Ga0247846_11010731 32Ga0255350_11056861 33Ga0209905_10515811 34Ga0255352_10352992 35Ga0255349_10055214 36Ga0302144_101193021 37Ga0302145_100114331 38Ga0302156_102858882 39Ga0302266_100091001 40Ga0302225_102099972 41Ga0302279_101456941 42Ga0302201_100479881 43Ga0302201_104152251 44Ga0302221_103597802 45Ga0302221_104688272 46Ga0302157_102881822 47Ga0302157_103809332 48Ga0302199_12179771 49Ga0302199_12262701 50Ga0302197_101688643 51Ga0302155_103618452 52Ga0302154_101752893 53Ga0311327_100721351 54Ga0311327_101327641 55Ga0311327_102100891 56Ga0311329_108912862 57Ga0311369_109172241 58Ga0311361_100226018 59Ga0311362_103398502 60Ga0302148_10364331 61Ga0311363_102669001 62Ga0311328_101311601 63Ga0311328_111382961 64Ga0311340_115959181 65Ga0311352_112565812 66Ga0311371_102575081 67Ga0311371_110903862 68Ga0311346_101650141 69Ga0311343_103884221 70Ga0311343_113704921 71Ga0311331_110442472 72Ga0311342_102493163 73Ga0302190_100762474 74Ga0302276_100574183 75Ga0302302_11548021 76Ga0311344_107753931 77Ga0302274_104846421 78Ga0302281_100497103 79Ga0302195_103499981 80Ga0302195_104258991 81Ga0302195_104594441 82Ga0302196_100440841 83Ga0302196_101227014 84Ga0311370_122747271 85Ga0302194_101405962 86Ga0302193_1000890712 87Ga0311372_117637102 88Ga0311357_106829122 89Ga0311357_115116182 90Ga0311356_111956462 91Ga0302313_103327381 92Ga0302313_104297931 93Ga0302311_106525321 94Ga0302311_110551142 95Ga0265762_11433501 96Ga0265743_1193601 97Ga0302308_100856212 98Ga0302308_101585991 99Ga0302325_122632551 100Ga0302324_1000213781 101Ga0302140_108944321 102Ga0302326_114841721 103Ga0310686_1056681734 104Ga0302321_1031869441 105Ga0302319_117108422 106Ga0334792_000587_3_278 107Ga0326724_0213717_857_1132 108Ga0370483_0103687_673_936 109Ga0370492_0349173_1_270
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122. 1Ga0062386_1013498491 2Ga0070765_1016997022 3Ga0073936_104812481 4Ga0116113_11961531 5Ga0181528_102974192 6Ga0182016_101651762 7Ga0182015_102444503 8Ga0181516_102268601 9Ga0187854_102459701 10Ga0187884_101282672 11Ga0182022_11593052 12Ga0182025_13044372 13Ga0182031_10393681 14Ga0302144_101193021 15Ga0302157_102881822 16Ga0311327_100721351 17Ga0311369_109172241 18Ga0311362_103398502 19Ga0311343_113704921 20Ga0311370_122747271 21Ga0311357_106829122 22Ga0302308_101585991 23Ga0310686_1056681734
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1Ga0181517_102518181 2Ga0062386_1013498491 3Ga0070765_1016997022 4Ga0181528_102974192 5Ga0182014_102696531 6Ga0182015_102444503 7Ga0182024_118060741 8Ga0187854_102459701 9Ga0187884_101282672 10Ga0182022_11593052 11Ga0182031_11436732 12Ga0224534_10150472 13Ga0208691_11503161 14Ga0247846_11010731 15Ga0255350_11056861 16Ga0302201_104152251 17Ga0302221_103597802 18Ga0302221_104688272 19Ga0302199_12179771 20Ga0302199_12262701 21Ga0302197_101688643 22Ga0302154_101752893 23Ga0311369_109172241 24Ga0311362_103398502 25Ga0302148_10364331 26Ga0302195_103499981 27Ga0302195_104258991 28Ga0302195_104594441 29Ga0311370_122747271 30Ga0311356_111956462 31Ga0265762_11433501 32Ga0265743_1193601 33Ga0302308_101585991 34Ga0310686_1056681734 35Ga0302319_117108422 36Ga0326724_0213717_857_1132 37Ga0370483_0103687_673_936 38Ga0370492_0349173_1_270
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.88% β-sheet: 30.77% Coil/Unstructured: 66.35%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00144	Beta-lactamase	18.35
PF00005	ABC_tran	12.84
PF12848	ABC_tran_Xtn	8.26
PF04014	MazE_antitoxin	4.59
PF13470	PIN_3	0.92
PF12543	DUF3738	0.92
PF01381	HTH_3	0.92
PF07690	MFS_1	0.92
PF07670	Gate	0.92
PF01145	Band_7	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	18.35
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	18.35
COG2367	Beta-lactamase class A	Defense mechanisms [V]	18.35
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.92
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.92

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
No data available in table

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	13.76%
Terrestrial	Environmental → Terrestrial	86.24%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	12.84%
Peat	Environmental → Terrestrial → Peat	68.81%
Sediment	Environmental → Aquatic → Sediment	0.92%
Soil	Environmental → Terrestrial → Soil	17.43%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	0.92%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	68.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.01%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	68.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	37.61%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.67%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.75%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.75%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	21.10%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 91 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1013498491	3300004152	Bog Forest Soil	TSQIHNDMLRIDNPPAYFNLALNVVQPGRGTSTGLIYRQCFAPVTMLYYVMKDPNDIGAGADFLYAKSGKYAAIPSH*
Ga0075019_106776632	3300006086	Watersheds	TSQVHNDMLRIDNPPSYFNLSVNVVQPGHGAGVGLIYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYASVPAR*
Ga0070765_1016997022	3300006176	Soil	KNGMLRIPNPPPYFTLSVNIPTPHIGAELNLVYRQCFAPVTVLYRIVNDVDDPQKGGDWLWAKAGKYASVPPPQ*
Ga0073936_104812481	3300009175	Freshwater Lake Hypolimnion	GNDGTATFSGGGLHEITSQIRNGMLRIDNPPAYFNLSMNVVQPGRGAGVGLIYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYAAVPAR*
Ga0116117_11793641	3300009635	Peatland	QIHNDMLRIDNPPAYFYKAMNVIQPGRGTEAGMIYRQCFAPVTMLYYVMKDAADIGKGADWLYAKSGKYAAVPAH*
Ga0116113_11961531	3300009638	Peatland	QIHNDMLRIENPPAYFNLAINVVTPGHGAGTGLVYRKCFAPVTMLYWVLNDPNGADGDMVYAKAGKYAAAPAK*
Ga0116101_10655512	3300009759	Peatland	VGTDGTSTFAGGGLHEITSQIHDDMLRIENPPAYFNLAINVVTPGHGAGTGLVYRKCFAPVTMLYWVLNDPNGADGDMVYAKAGKYAAAPAK*
Ga0181517_102518181	3300014160	Bog	SQIHNDMLRIDNPPAYFNLSVNVVQPGHGAGLGLIYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYASVPAR*
Ga0181528_102974192	3300014167	Bog	LHEITSQIHNNTLRIDNPPAYFNMSTNFIQPGRGAGIGLVYRQCFAPVTNLYYVLKDPNDPGDGDWLYAKSGKYAAVPAH*
Ga0181534_102442562	3300014168	Bog	YEFGVGNDGTSTFSGGHIHEISSQIHNDMLRIDNPPAYFNAAMNVVQPGHGTSTGLIYRQCFAPVTMRYYVLTDPADPGKGADWLYAKAGKYAAVPAR*
Ga0182010_101484813	3300014490	Fen	QVHNDMLRIDNPPAYFNLSMNVVQPGHGAGIGLIYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYASVPAR*
Ga0182014_102696531	3300014491	Bog	TSTFKGGGIHEITSQIHNDMLRIDNPPAYFNLATNVLQPGHGTGIGLVYRQCFAPVTMLYYVLKDPNNPGSGGDYLYAKSGKYAAVPTH*
Ga0182014_105785751	3300014491	Bog	DGTSTFKGGGIHEITSQIHNDMLRIDNPPAYFNLAMNVIQPGHGTGIGLVYRQCFAPVTMLYYILKDPNDPGSGGDFLYAKAGKYAAVPTH*
Ga0182016_101651762	3300014493	Bog	HNGALRIDNPPAYFNLSVNIPTPNRGAGIGLVYRQCFAPVTNLYYVVKDPEDVGKGADFLFAKSGKYAAVQ*
Ga0182015_102444503	3300014495	Palsa	NQIHNGMVRIDNPPAYFNLALNVMTPHFGTGDTLIYRQCFAPVTVLYYVMKDQADPGKGGDYLYGKSGKYATEP*
Ga0182011_106752241	3300014496	Fen	HEITSQIHNDMLRIDNPPAYFILSMNVVQPGHGAGVGLTYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYASVPAR*
Ga0182024_118060741	3300014501	Permafrost	TFGGGGLHEITSQIRNDMLRIDNPPVYFNLSLNVVQPNHGAGTALIYRQCFAPVTMLYYILKDPNDPGQGGDFLYAKSGKYAPLPAR*
Ga0181516_102268601	3300014655	Bog	MLRIDNPPAYFNLSTNFIQPGRGAGIGLIYRQCFAPTTMLYYVLKDPNDPGAGGDFLYAKSGKFASVPTH*
Ga0187854_102459701	3300017938	Peatland	GLHEITNQVHNGMLRIDNPPAYFNLGVNIPTPNHGADVGLIYRQCFAPTTMLYFVVKDPSNPANGGDWLYAKAGKYAALPAH
Ga0187884_101282672	3300018009	Peatland	QIRNGMLRIDNPPPYFNLSMNIVQPGHGAGLSLIYRQCFAPTTMLYYVVKDPGNPGEGGDWLYAKAGKYAAAPTH
Ga0187883_101634031	3300018037	Peatland	IHNDMLRIENPPAYFNLAINVVTPGHGAGTGLVYRKCFAPVTMLYWVLNDPNGADGDMVYAKAGKYAAAPAK
Ga0187851_103851841	3300018046	Peatland	QIHNDMLRIDNPPAYFYKAMNVIQPGRGTDAGMIYRQCFAPVTMLYYVMKDAADVGKGADWLYAKSGKYAAVPAH
Ga0182022_11593052	3300019785	Fen	MAPITRRWQAAIDTTYNVDTPPAYSFGVGKDGTATFSGGGLHEITSQVHNDMLRIDNPPAYFNLSMNVVQPGHGAGAGGPQSTASALPLSPCSTTSSRPQRSRQGGDFLYAKSGKYASVPAR
Ga0182025_13044372	3300019786	Permafrost	MLRIDHVPAYFMFGINIPTPHEGAATGLIYRQCFAPVTVLYDIIKDPSDPGKGNDWLYAKAGKYAAVPAH
Ga0182031_10393681	3300019787	Bog	MLRIDNPPAYFNLSMNIVAPGHGAGIGLVYRQCFAPVTNLYYIVKDPDDLSKGADFLYAKSGKYAPAPSK
Ga0182031_11436732	3300019787	Bog	TSTFAGGGLHEITSQIHNDMLRIENPPAYFNLAINVVTPGHGAGTGLVYRKCFAPVTMLYWVLNDPNGADGDMVYAKAGKYAAAPAK
Ga0224534_10150472	3300022524	Soil	RDGTSTFKGGGIHEITSQIHNDMLRIDNPPAYFNLALNVIQPGHGTGIGLVYRQCFAPVTMLYYVMKDPNDIGAGADYLYAKAGKFAAVPTH
Ga0224520_10328711	3300023075	Soil	TSQVHNDMLRIDNPPAYFNLSMNVVQPGHGAGAGGLIYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYASVPAR
Ga0207927_10936872	3300025579	Arctic Peat Soil	FSGGGLHEITSQIHNDMLRIDNPPAYFNLSMNVVQPGHGAGVGLTYRQCFAPVTMLYYVLKDANDPGQGGDFLYAKSGKYASVPAR
Ga0208691_11503161	3300025612	Peatland	GGLHEITDQIHNGMLRINNPPAYFMFGVNIPTPNHGADVGLIYRQCFAPVTMLYDVIKDPSNPADGGDWLYAKSGEYAVPPSQ
Ga0247846_11010731	3300026474	Soil	GAGLHEITSQIHSDILRIDNPPAYFNLSTNFIQPGRGAGIGLIYRQCFAPTTMLYFVLKDPNDPGAGGDFLYAKSGKYSTVPTR
Ga0255350_11056861	3300026502	Soil	GMLRIDNPPAYFNFGINIPTPNHGADVGLIYRQCFAPVTMLYYILKDPNNPADGGDWLYAKAGKYAAVPTH
Ga0209905_10515811	3300027634	Thawing Permafrost	MLRIDNPPAYFNLALNVIQPGHGTGIGLVYRQCFAPVTMLYYVMKDPNDIGAGADYLYAKAGKFAAVPTH
Ga0255352_10352992	3300028082	Soil	YKGGGLHEITNQIRNGMLRIDNPPAYFNLSMNIVAPGHGAGIGLVYRQCFAPVTNLYYIVKDPDDLSKGADFLYAKSGKYAPAPSK
Ga0255349_10055214	3300028090	Soil	FKGGGIHEITSQIHNDMLRIDNPPAYFNLALNVIQPGHGTGIGLVYRQCFAPVTMLYYVMKDPNDIGAGADYLYAKAGKFAAVPTH
Ga0302144_101193021	3300028560	Bog	STFSGGHIHEITSQIHNDMLRIDNPPINFNLALNVKQPHRGTADTEIYRKCFAPVTMLYYVMKDPTDIGAGADFLYAKAGKYAAVPTH
Ga0302145_100114331	3300028565	Bog	EFGTGRDGSSTFAGGGIHEITSQIHNDMLRIDNPPAYFNLATNVVQPGHGTGIGLVYRQCFAPVTMLYYVMKDPNDIGAGADFLYAKAGKYAAVPTH
Ga0302156_102858882	3300028748	Bog	TFSGGGLHEITSQIHNDMLRIDNPPAYFNLSMNVVQPGHGAGAGGLIYRQCFAPVTMLYYVLKDSNNPGEGGDFLYAKSGKYASVPAR
Ga0302266_100091001	3300028779	Bog	QIHNDMLRLDNPPDHFNLALNVMQPHRGTADTTIYRQCFAPVTMLYYIMKDPTDIGAGADFLYAKAGKYAAVPAK
Ga0302225_102099972	3300028780	Palsa	VGNDGTSTFSGGHIHELTSQIHNDMLRIDNPPAYFNTAMNVVQPGHGTGTGLIYRQCFAPVTMLYYVLKDPADIGKGADWLYAKAGKYAAVPAH
Ga0302279_101456941	3300028783	Bog	GILRIDNPPAYFNLSVNIPTPNHGAGVGLVYRQCFAPVTNLYYVVKDPADMSKGADFLFAKSGKYAAAH
Ga0302201_100479881	3300028785	Bog	DGTSTFSGGHIHEITSQIHNDMLRIDNPPQAFNLALNVMQPHRGTADTTIYRQCFAPVTMLYYIMKDPTDIGAGADFLYAKAGKYAAVPAK
Ga0302201_104152251	3300028785	Bog	AYTFGVGDDGTSTFSGGHIHEITSQIHNDMLRIDNPPINFNLALNVKQPHRGTADTEIYRKCFAPVTMLYYVMKDPTDIGAGADFLYAKAGKYAAVPTH
Ga0302221_103597802	3300028806	Palsa	SQIHNDMLRIDNPPAYFNTAMNVVQPGHGTGTGLIYRQCFAPVTMLYYVLKDPADIGKGADWLYAKAGKYAAVPAH
Ga0302221_104688272	3300028806	Palsa	HEISNQIHNDMLRIDNPPATFYKAMNVKQPGRGTEAGMIYRQCFAPVTMLYYVMKDPADIGKGADWLYAKAGKYAAVPAK
Ga0302157_102881822	3300028813	Bog	RIDNPPQAFNLALNVMQPHRGTADTTIYRQCFAPVTMLYYIMKDPTDIGAGADFLYAKAGKYAAVPAK
Ga0302157_103809332	3300028813	Bog	ITSQIHNDMLRIENPPAYFNLAINVVTPGHGAGTGLVYRKCFAPVTMLYWVLNDPNGADGDMVYAKAGKYAAAPAK
Ga0302199_12179771	3300028860	Bog	TYAGGGLHEISNQVHDGMLRLDNPPAYFMFGVNIPTPNRGADVGLIYRQCFAPVTMLYYVIKDPSNPADCGDWLYAKAGKYASVPAR
Ga0302199_12262701	3300028860	Bog	TYSGGGLHEITSQVHNGTLRIDNPPAYFNLSVNIPTPNRGAGIGLVYRQCFAPVTNLYYVVNDPEDMSKGADFLYAKSGKYAAVP
Ga0302197_101688643	3300028873	Bog	ITNQVHNGELRIDNPPAYFMFGINIPTPNRGADVGLIYRQCFAPVTTLYYVVKDPANPGDGGDYLYAKAGKYAGAH
Ga0302155_103618452	3300028874	Bog	LHEITSQVRNGILRIDNPPAYFNLSVNIPTPNHGAGVGLVYRQCFAPVTNLYYVVQDPGDMSKGADFLFAKSGKYAVAH
Ga0302154_101752893	3300028882	Bog	TFGVGDDGTSTFSGGSIHEITSQIHNDMLRIDNPPDHFNLALNVMQPHRGTADTLIYRKCFAPVTMLYYIMKDPADIGAGADFLYAKAGKYAAAPAK
Ga0311327_100721351	3300029883	Bog	SQVHNGELRIDNPPAYFMFGINIPTPNRGADVGLIYRQCFAPVTTLYYVVKDPANPGDGGDYLYAKAGKYAGAH
Ga0311327_101327641	3300029883	Bog	VRNGILRIDNPPAYFNLSVNIPTPNHGAGVGLVYRQCFAPVTNLYYVVQDPGDMSKGADFLFAKSGKYAVAH
Ga0311327_102100891	3300029883	Bog	NDMLRIDNPPAYFNLALNVIQPGHGTGIGLVYRQCFAPVTMLYYVMKDPNDIGAGADYLYAKAGKFAAVPTH
Ga0311329_108912862	3300029907	Bog	SGGHIHEITSQIHNDMLRIDNPPINFNLALNVKQPHRGTADTEIYRKCFAPVTMLYYVMKDPTDIGAGADFLYAKAGKYAAVPTH
Ga0311369_109172241	3300029910	Palsa	FSGGGLHEITNQVHNGMLRIDNPPEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYATVPAH
Ga0311361_100226018	3300029911	Bog	MLRIDNPPAYFNVAMNVVQPGHGAATGFIYRQCFAPVTMLYYVLKDPNDPGQGADWLYAKSGKYAAVPAH
Ga0311362_103398502	3300029913	Bog	GGIHEITNQIHNDMLRIDAPPAYFNLAMNVLQPHHGTGDGLIYRQCFAPVTMLYYVLKDPSDPGQGGDYLYAKAGKYAAVPTH
Ga0302148_10364331	3300029916	Bog	STYKGGGLHEITNQIRNGMLRIDNPPAYFNLSMNIVAPGHGAGIGLVYRQCFAPVTNLYYIVKDPDDLSKGADFLYAKSGKYAPAPSK
Ga0311363_102669001	3300029922	Fen	PDHFNLALNVMQPHRGTADTTIYRQCFAPVTMLYYIMKDPTDIGAGADFLYAKAGKYAAVPAK
Ga0311328_101311601	3300029939	Bog	MLRIDNPPAYLNLALNVIQPGHGTGIGLVYRQCFAPVTMLYYVMKDPNDIGAGADYLYAKAGKFAAVPTH
Ga0311328_111382961	3300029939	Bog	DGVGTDGTSTFAGGGLHEITSQIHNDMLRIENPPAYFNLAINVVTTGHGAGTGLVYRKCFAPVTMLYWVLNDPNGADGDMVYAKAGKYAAAPAK
Ga0311340_115959181	3300029943	Palsa	TFSGGQIHEITSQIHNDMLRIDNPPAYFYKAMNVIQPNRGTEAGMIYRQCFAPVTMLYYVMKDPTDIGKGADWLYAKAGKYAVVPAH
Ga0311352_112565812	3300029944	Palsa	TSTFSGGQIHEISSQIHNDMLRIDNPPAYFYKAMNVKQPGRGTEAGMIYRQCFAPVTMLYYVMKDPADIGKGADWLYAKSGKYAAIPTR
Ga0311371_102575081	3300029951	Palsa	SQIHNDMLRIDNPPAYFYKAMNVIQPNRGTEAGMIYRQCFAPVTMLYYVMKDPTDIGKGADWLYAKAGKYAVVPAH
Ga0311371_110903862	3300029951	Palsa	LRIDNPPEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYATVPAH
Ga0311346_101650141	3300029952	Bog	HEITSQVHNGELRIDNPPAYFMFGINIPTPNRGADVGLIYRQCFAPVTTLYYVVKDPANPGDGGDYLYAKAGKYAGAH
Ga0311343_103884221	3300029953	Bog	SFGVGRDGTATFSGGGLHEITSQIHNDMLRIDNPPAYFNLSMNVVQPGHGAGAGGLIYRQCFAPVTMLYYVLKDSNNPGEGGDFLYAKSGKYASVPAR
Ga0311343_113704921	3300029953	Bog	LRIDNPPAYFNFAMNVMQPNHGTAIGMVYRQCFAPVTMLYYVLKDPNDVGAGADWLYAKAGKYAAVPTH
Ga0311331_110442472	3300029954	Bog	LLRIDDPPAYFNLAMNVLQPHHGTGDGLVYRQCFAPVTMLYYVLKDASDPGQGGDYLYAKAGKYAAVPSR
Ga0311342_102493163	3300029955	Bog	RLDNPPDHFNLALNVMQPHRGTADTTIYRQCFAPVTMLYYIMKDPTDIGAGADFLYAKAGKYAAVPAK
Ga0302190_100762474	3300029988	Bog	EITSQVHNGELRIDNPPAYFMFGINIPTPNRGADVGLIYRQCFAPVTTLYYVVKDPANPGDGGDYLYAKAGKYAGAH
Ga0302276_100574183	3300029992	Bog	FSGGGLHEITSQIRNDMVRVDNPPAYFNLSVNVVQPGNGAGSGLIYRQCFGPVTMLYYILKDPNDPGQGGDFLYAKSGKYASVPAR
Ga0302302_11548021	3300029997	Palsa	HELTSQIHNDMLRIDNPPAYFNTAMNVVQPGHGTGTGLIYRQCFAPVTMLYYVLKDPADIGKGADWLYAKAGKYAAVPAH
Ga0311344_107753931	3300030020	Bog	QVHNGELRIDNPPAYFMFGINIPTPNRGADVGLIYRQCFAPVTTLYYVVKDPANPGDGGDYLYAKAGKYAGAH
Ga0302274_104846421	3300030041	Bog	VGDDGTSTFSGGHIHEITSQIHNDMLRIDNPPINFNLALNVKQPHRGTADTEIYRKCFAPVTMLYYVMKDPTDIGAGADFLYAKAGKYAAVPTH
Ga0302281_100497103	3300030044	Fen	RNGSLRIDNPPAYFNLSVNIPTPNRGAGIGLVYRQCFAPVTNLYYVVNDPEDMSKGADFLYAKSGKYAAVP
Ga0302195_103499981	3300030051	Bog	GLHEITSQVRNGILRIDNPPAYFNLSVNIPTPNHGAGVGLVYRQCFAPVTNLYYVVQDPGDMSKGADFLFAKSGKYAVAH
Ga0302195_104258991	3300030051	Bog	TSQIHNDMLRIDNPPAYFNVAMNVVQPGHGAATGFIYRQCFAPVTMLYYVLKDPNDPGQGADWLYAKSGKYAAVPAH
Ga0302195_104594441	3300030051	Bog	EITSQIHNSALRIENPPGYFNLSTNFIQPGRGAGITLIYRQCFAPTTVLYFVLKDPSDPGAGGDWLYAKSGKYSTAPSN
Ga0302196_100440841	3300030225	Bog	SQVHNGILRIDNPPAYFNLSVNIPTPNHGAGVGLVYRQCFAPVTNLYYVVKDPADMSKGADFLFAKSGKYAAAH
Ga0302196_101227014	3300030225	Bog	GGLHEITNQVHNGELRIDNPPAYFMFGINIPTPNRGADVGLIYRQCFAPVTTLYYVVKDPANPGDGGDYLYAKAGKYAGAH
Ga0311370_122747271	3300030503	Palsa	AIYSGGGLHEITSQVHNGTLRIDNPPAYFNLSVNIPTPNKAAGIGLVYRQCAAPVTNLYYIVKDPDDLGKGADFLFAKSGKYAAH
Ga0302194_101405962	3300030506	Bog	HNGILRIDNPPAYFNLSVNIPTPNHGAGVGLVYRQCFAPVTNLYYVVKDPADMSKGADFLFAKSGKYAAAH
Ga0302193_1000890712	3300030519	Bog	ITSQVHNGELRIDNPPAYFMFGINIPTPNRGADVGLIYRQCFAPVTTLYYVVKDPANPGDGGDYLYAKAGKYAGAH
Ga0311372_117637102	3300030520	Palsa	NPPEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYATVPAH
Ga0311357_106829122	3300030524	Palsa	PAYFYKAMNVIQPNRGTEAGMIYRQCFAPVTMLYYVMKDPTDIGKGADWLYAKAGKYAVVPAH
Ga0311357_115116182	3300030524	Palsa	VGEDGTSTFSGGGLHEITNQVHNGMLRIDNPPEYFMLSVNVPTPHEGAGSALIYRQCFAPVTELYYILKDPSDPGKGTDYLYAKSGKYAAVPAH
Ga0311356_111956462	3300030617	Palsa	GGGIHEISSQIHNDMLRIDNPPAYFNFAMNVMQPNHGTAIGMVYRQCFAPVTMLYYVLKDPNDVGAGADWLYAKAGKYAAVPTH
Ga0302313_103327381	3300030693	Palsa	LRIDNPPAYFYKAMNVIQPNRGTEAGMIYRQCFAPVTMLYYVMKDPADIGKGADWLYAKAGKYAAVPAK
Ga0302313_104297931	3300030693	Palsa	RIYNPPEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYAAVPAH
Ga0302311_106525321	3300030739	Palsa	LRIDNPPAYFYKAMNVKQPGRGTEAGMIYRQCFAPVTMLYYVMKDPADIGKGADWLYAKAGKYAAVPAK
Ga0302311_110551142	3300030739	Palsa	GIHEISSQIHNDMLRIDNPPAYFNFAMNVMQPNHGTAIGMVYRQCFAPVTMLYYVLKDPNDVGAGADWLYAKAGKYAAVPTH
Ga0265762_11433501	3300030760	Soil	RIDNPPAYFMLSVNIPTPHEGAGTGLIYRQCFAPVTVLYDIIKDPSDPGKGADFLYAKAGKYATVPAH
Ga0265743_1193601	3300030885	Soil	ITNQVHNGMLRIDHVPAYFQFGINIPTPHEGAATGLIYRQCFAPVTVLYDIVKDPSDPGKGSDWLYAKSGKYAAVPTQ
Ga0302308_100856212	3300031027	Palsa	MLRIDNPPEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYAAVPAH
Ga0302308_101585991	3300031027	Palsa	ITNQLRNGMLRVDNPPPYFTFTVNVPTPHEGAAGGYIYRQCFAPVTNLYYILKDPSDPAKGTDFLYAKSGKYAAAPAH
Ga0302325_122632551	3300031234	Palsa	HNGMLRIDNPPEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYATVPAH
Ga0302324_1000213781	3300031236	Palsa	GGGLHEITNQVHNGMLRIDNPPEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYAAVPAH
Ga0302140_108944321	3300031261	Bog	NPPDHFNLALNVMQPHRGTADTTIYRQCFAPVTMLYYIMKDPTDIGAGADFLYAKAGKYAVAPTK
Ga0302326_114841721	3300031525	Palsa	GMLRIVNPTEYFMLSVNVPTPHEGAGSALIYRQCSAPVTNLYYVLKDPSDPGKGTDYLYAKSGKYATVPAH
Ga0310686_1056681734	3300031708	Soil	GGLHEITNQVHNGMLRIDHAPPYFMFGINIPTPHEGADTGLIYRQCFAPVTVLYDIIKDPSDPGKGNDWLYAKSGKYAVAPTQ
Ga0302321_1031869441	3300031726	Fen	GNDGTATFSGGGLHEITSQIHNDMLRIDNPPAYFNLSMNVVQPGHGAGVGLIYRQCFAPVTMLYYVLKDPNDPGQGGDFLYAKSGKYASVPAR
Ga0302319_117108422	3300031788	Bog	LHEITSQIRNGVLRIDHPPAYFNLSTNIVQPGRGAGIGLIYRQCFAPVTNLYYIVKDPDDLSKGADFLYAKSGKYAAQ
Ga0334792_000587_3_278	3300033888	Soil	DGTSTFKGGGIHEITSQIHNDMLRIDNPPAYFNLALNVIQPGHGTGIGLVYRQCFAPVTMLYYVMKDPNDIGAGADYLYAKAGKFAAVPTH
Ga0326724_0213717_857_1132	3300034091	Peat Soil	DGTSTFSGGGLHEITSQIRNGMLRIDNPPAYFNLSTNFIQPGRGAGIGLIYRQCFAPTTMLYFVAKDPNDPGAGGDWLYAKSGKYAAVPTH
Ga0370483_0103687_673_936	3300034124	Untreated Peat Soil	TYSGGGLREITNQVHNGMLRIDNPPAYFMLGVNIPTPHEGADVGLIYRQCFAPVTVLYDIVKDPSDPGKGNDWLYAKAGKYAAVPAH
Ga0370492_0349173_1_270	3300034282	Untreated Peat Soil	DGTATFSGGGLHEITSQVHNGTLRIDNPPAYFNLSVNIPTPNRGAGVGLVYRQCFAPVTNLYYVVKDPDDMGKGADLLFAKAGKYASAH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089178

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences