Metagenome / Metatranscriptome Family F089176

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089176
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	87 residues
Representative Sequence	MIARILCTAAALSLAGFGFFANPVLANPLSPFGILFLLVSGVVWFGWEMIRDAYAYREEICPNNGRAFLQTARLGPVLVNRLVRKGE
Number of Associated Samples	75
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.40 %
% of genes near scaffold ends (potentially truncated)	19.27 %
% of genes from short scaffolds (< 2000 bps)	75.23 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.716 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (20.183 % of family members)
Environment Ontology (ENVO)	Unclassified (35.780 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.055 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.35% β-sheet: 0.00% Coil/Unstructured: 35.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03972	MmgE_PrpD	27.52
PF02803	Thiolase_C	27.52
PF06724	DUF1206	10.09
PF00583	Acetyltransf_1	4.59
PF02668	TauD	2.75
PF00141	peroxidase	0.92
PF01464	SLT	0.92
PF16188	Peptidase_M24_C	0.92
PF11306	DUF3108	0.92
PF04909	Amidohydro_2	0.92
PF12804	NTP_transf_3	0.92
PF13522	GATase_6	0.92
PF00355	Rieske	0.92
PF00230	MIP	0.92
PF11154	DUF2934	0.92
PF07715	Plug	0.92
PF07045	DUF1330	0.92
PF01339	CheB_methylest	0.92
PF01738	DLH	0.92
PF00108	Thiolase_N	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	28.44
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	27.52
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.75
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.83
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	0.92
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.92
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.89 %
Unclassified	root	N/A	32.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.72 %
Unclassified	root	N/A	32.11 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	9.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.46 %
Unclassified	root	N/A	32.11 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	9.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.03 %
Unclassified	root	N/A	32.11 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	9.17 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.60 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	9.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.83 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.60 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	9.17 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.83 %
Afifellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Afifellaceae	0.92 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.60 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	9.17 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.83 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.92 %
Afifellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Afifellaceae	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.60 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	9.17 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.83 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples	0.92 %
Afifellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Afifellaceae	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.11 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.60 %
Symbiodinium pilosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	6.42 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.83 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	0.92 %
Afifellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Afifellaceae	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10001085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20526	Open in IMG/M
3300002245\|JGIcombinedJ26739_100017833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6021	Open in IMG/M
3300005332\|Ga0066388_104062151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	746	Open in IMG/M
3300005534\|Ga0070735_10034085	All Organisms → cellular organisms → Bacteria	3506	Open in IMG/M
3300005534\|Ga0070735_10062136	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300005538\|Ga0070731_10392009	Not Available	923	Open in IMG/M
3300005610\|Ga0070763_10576490	Not Available	650	Open in IMG/M
3300005712\|Ga0070764_10972902	Not Available	534	Open in IMG/M
3300005764\|Ga0066903_102843873	Not Available	939	Open in IMG/M
3300005764\|Ga0066903_104578620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300006050\|Ga0075028_100385838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300006176\|Ga0070765_101857622	Not Available	565	Open in IMG/M
3300006638\|Ga0075522_10000932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21890	Open in IMG/M
3300009524\|Ga0116225_1416599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300009683\|Ga0116224_10506357	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300010048\|Ga0126373_10223690	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	1837	Open in IMG/M
3300010048\|Ga0126373_10457929	Not Available	1311	Open in IMG/M
3300010048\|Ga0126373_11091070	Not Available	864	Open in IMG/M
3300010361\|Ga0126378_10315390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1669	Open in IMG/M
3300010361\|Ga0126378_10409593	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	1468	Open in IMG/M
3300010361\|Ga0126378_12087351	Not Available	646	Open in IMG/M
3300010376\|Ga0126381_100130667	All Organisms → cellular organisms → Bacteria	3267	Open in IMG/M
3300010376\|Ga0126381_100995994	All Organisms → cellular organisms → Bacteria → Proteobacteria	1209	Open in IMG/M
3300010880\|Ga0126350_11055701	All Organisms → cellular organisms → Bacteria → Proteobacteria	1610	Open in IMG/M
3300011120\|Ga0150983_13985409	Not Available	556	Open in IMG/M
3300014156\|Ga0181518_10081790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300014158\|Ga0181521_10006602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12495	Open in IMG/M
3300014495\|Ga0182015_10036720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3713	Open in IMG/M
3300014501\|Ga0182024_10019758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12377	Open in IMG/M
3300014501\|Ga0182024_10093162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4424	Open in IMG/M
3300017822\|Ga0187802_10240329	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	700	Open in IMG/M
3300017942\|Ga0187808_10611639	Not Available	506	Open in IMG/M
3300017955\|Ga0187817_11143082	Not Available	500	Open in IMG/M
3300017959\|Ga0187779_10854997	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300017961\|Ga0187778_10677732	Not Available	696	Open in IMG/M
3300017961\|Ga0187778_10692527	Not Available	689	Open in IMG/M
3300017972\|Ga0187781_10183582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1474	Open in IMG/M
3300017972\|Ga0187781_10653481	Not Available	759	Open in IMG/M
3300017975\|Ga0187782_10453225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	978	Open in IMG/M
3300018007\|Ga0187805_10334110	Not Available	699	Open in IMG/M
3300018042\|Ga0187871_10005164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9618	Open in IMG/M
3300018062\|Ga0187784_10007601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8753	Open in IMG/M
3300018062\|Ga0187784_10018520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5626	Open in IMG/M
3300018086\|Ga0187769_10932978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Afifellaceae	657	Open in IMG/M
3300018088\|Ga0187771_10403153	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300018090\|Ga0187770_10304268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1241	Open in IMG/M
3300020582\|Ga0210395_10156262	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1703	Open in IMG/M
3300020583\|Ga0210401_10409706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1218	Open in IMG/M
3300021171\|Ga0210405_10474507	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300021180\|Ga0210396_11240130	Not Available	623	Open in IMG/M
3300021181\|Ga0210388_10284634	All Organisms → cellular organisms → Bacteria → Proteobacteria	1452	Open in IMG/M
3300021181\|Ga0210388_10624646	Not Available	941	Open in IMG/M
3300021181\|Ga0210388_10984480	Not Available	724	Open in IMG/M
3300021384\|Ga0213876_10535600	Not Available	623	Open in IMG/M
3300021401\|Ga0210393_10467833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300021401\|Ga0210393_10591034	Not Available	907	Open in IMG/M
3300021401\|Ga0210393_11437662	Not Available	550	Open in IMG/M
3300021403\|Ga0210397_10627680	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	823	Open in IMG/M
3300021407\|Ga0210383_10311953	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300021420\|Ga0210394_10037993	All Organisms → cellular organisms → Bacteria → Proteobacteria	4270	Open in IMG/M
3300021433\|Ga0210391_10017646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5762	Open in IMG/M
3300021477\|Ga0210398_10014217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6935	Open in IMG/M
3300021477\|Ga0210398_10211043	All Organisms → cellular organisms → Bacteria → Proteobacteria	1582	Open in IMG/M
3300021479\|Ga0210410_10283688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1486	Open in IMG/M
3300021479\|Ga0210410_10355883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1313	Open in IMG/M
3300021560\|Ga0126371_10334401	Not Available	1647	Open in IMG/M
3300021560\|Ga0126371_10477424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1394	Open in IMG/M
3300021560\|Ga0126371_10485974	Not Available	1382	Open in IMG/M
3300021560\|Ga0126371_11209142	Not Available	892	Open in IMG/M
3300021560\|Ga0126371_11731745	Not Available	748	Open in IMG/M
3300025627\|Ga0208220_1005840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4451	Open in IMG/M
3300027842\|Ga0209580_10307416	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	789	Open in IMG/M
3300027854\|Ga0209517_10000181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	113361	Open in IMG/M
3300027867\|Ga0209167_10031613	All Organisms → cellular organisms → Bacteria → Proteobacteria	2546	Open in IMG/M
3300027889\|Ga0209380_10224450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1103	Open in IMG/M
3300027895\|Ga0209624_10035674	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300027895\|Ga0209624_10777416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300027986\|Ga0209168_10073606	Not Available	1789	Open in IMG/M
3300028906\|Ga0308309_11265374	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300030740\|Ga0265460_11161619	Not Available	734	Open in IMG/M
3300031234\|Ga0302325_12780231	Not Available	574	Open in IMG/M
3300031241\|Ga0265325_10068973	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	1779	Open in IMG/M
3300031595\|Ga0265313_10205307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300031708\|Ga0310686_111828321	Not Available	2415	Open in IMG/M
3300031708\|Ga0310686_117535713	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031715\|Ga0307476_10410874	Not Available	1000	Open in IMG/M
3300031715\|Ga0307476_11401340	Not Available	509	Open in IMG/M
3300032770\|Ga0335085_10000598	All Organisms → cellular organisms → Bacteria → Proteobacteria	97545	Open in IMG/M
3300032770\|Ga0335085_11887603	Not Available	609	Open in IMG/M
3300032782\|Ga0335082_10281760	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300032783\|Ga0335079_10171746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2421	Open in IMG/M
3300032783\|Ga0335079_10434414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1410	Open in IMG/M
3300032805\|Ga0335078_11466939	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	765	Open in IMG/M
3300032892\|Ga0335081_10268410	All Organisms → cellular organisms → Bacteria → Proteobacteria	2287	Open in IMG/M
3300032895\|Ga0335074_10012387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11955	Open in IMG/M
3300032895\|Ga0335074_10370044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1578	Open in IMG/M
3300032895\|Ga0335074_10645150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300032895\|Ga0335074_10699000	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300032895\|Ga0335074_11365248	Not Available	578	Open in IMG/M
3300032896\|Ga0335075_10229342	All Organisms → cellular organisms → Bacteria → Proteobacteria	2172	Open in IMG/M
3300032896\|Ga0335075_10322442	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	1707	Open in IMG/M
3300032898\|Ga0335072_10829610	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	879	Open in IMG/M
3300032898\|Ga0335072_10888157	Not Available	837	Open in IMG/M
3300032954\|Ga0335083_10400720	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300032955\|Ga0335076_10410726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1238	Open in IMG/M
3300032955\|Ga0335076_11098047	Not Available	678	Open in IMG/M
3300033134\|Ga0335073_10955136	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	894	Open in IMG/M
3300033158\|Ga0335077_10091359	All Organisms → cellular organisms → Bacteria → Proteobacteria	3592	Open in IMG/M
3300033158\|Ga0335077_11636411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.91%
Aquatic	Environmental → Aquatic	7.34%
Plants	Host-Associated → Plants	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.99%
Freshwater	Environmental → Aquatic → Freshwater	6.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%
Peat	Environmental → Terrestrial → Peat	0.92%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	33.03%
Loam	Environmental → Terrestrial → Soil → Loam	11.01%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	30.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.01%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	20.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	10.09%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.92%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100010855	3300000567	Peatlands Soil	MAARILCTAAALALSAFGFLGNPVIANPLSPFGIVFLMISGVVWFGWEMFCDAYDYREEICPNNGHAFLETVRLGPVFVSQLVRKNTE*
JGIcombinedJ26739_1000178333	3300002245	Forest Soil	MIARILCTGGALLLAAFGFFANPVSANPVSPFGIVFLLVSGVVWFAWDMIRDAYAYRDEVCPNNGRAFLQTVRLGPVLVNRLIRKAD*
Ga0066388_1040621512	3300005332	Tropical Forest Soil	MIARVCCTAAALGLAGLGFFDNPGVANPFSPFGIVFLIVSGLVWFGWQMFGDAYAYREELCPNRGHEFLQTERLGPALVNRLVARDAQ*
Ga0070735_100340853	3300005534	Surface Soil	MIARILCTGGALGLSGFGFFDNPVSADPLSAFGILFLVVSGVVWFGWNAICDSYAYREEICPNNGRAFLQTVRLGPVLVNRLVGKGE*
Ga0070735_100621363	3300005534	Surface Soil	MIARIFCTGAALALAGFGFFANPVSADPLSPFGIMLLVVSGVVWFGWDAIRDSYAYREEVCPNNGRAFLQTVRLGPVLVGGLIRKRID*
Ga0070731_103920092	3300005538	Surface Soil	MIGRILCTGAALALAALGFFGYAATIEPLSPFGILFLLISGVVWFAWDMIGDAYAFREEVCPNRGRAFLQTVRLGPVLVNGLVRKR*
Ga0070763_105764901	3300005610	Soil	MVARIFCTGAALALAGFGFFDSPIAANPLSPFGILFLLISGVVWFGWDAICDSYAYREEICPNQGRAFLQTVRLGPVLVTRLIRKGE*
Ga0070764_109729021	3300005712	Soil	MVGRVLCTGAALALAALGFFDNPATAWPLNSFGLLFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKSAK*
Ga0066903_1028438733	3300005764	Tropical Forest Soil	MTARVVSTAVALLLAALGFFANPELADPLSPFGIVFLFVSGVVWFGWDMLRAAYAYREEICANSGQLFLATERLGPALVDRLVRKRD*
Ga0066903_1045786202	3300005764	Tropical Forest Soil	MIARILCTGAALALSGFGFFDNPVLANPLSPFGILFLMVSGVVWFGWNAICDAYAYREEVCPNNGRAFLQTVRLGPVLASGLIRKGE*
Ga0075028_1003858382	3300006050	Watersheds	MPVMIARIACTVAVLLLSGLGFFSNPALANPLSPFGIVFLLLSGVLWFGWDMLRAAYAYREEIHANSGTMFLSTERLGPVLVDRLVRKRD*
Ga0070765_1018576222	3300006176	Soil	MIGRVLCTGAALALAALGFFGNSVTSEPLNPFGLLFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKK*
Ga0075522_1000093225	3300006638	Arctic Peat Soil	MVTRIFCTAAALLLALFGFFENPVSVHPLAPFGILFLGLSGVIWFAWDVIGDAYAYREEICPNNGRAFLQTVRLGPVLVNGLVRKGTD*
Ga0116225_14165992	3300009524	Peatlands Soil	SAFGFLGNPVIANPLSPFGIVFLMISGVVWFGWEMFCDAYDYREEICPNNGHAFLETVRLGPGFVSQLVRQKTE*
Ga0116224_105063572	3300009683	Peatlands Soil	MAARILCTAAALALSAFGFLGNPVIANPLSPFGIVFLMISGVVWFGWEMFCDAYDYREEICPNNGHAFLETVR
Ga0126373_102236903	3300010048	Tropical Forest Soil	MIARICCTAAALGLAGLGFFDNPGVANPLSPFGIVFLIVSGLVWFGWQMIGDAYAYRKELCPNRDHEFLQTERLGPALVNRLVAHDARH*
Ga0126373_104579292	3300010048	Tropical Forest Soil	MIARLLCTCATLSLSAFGFFGNPVLADPLSPFGIMMLVVSGIVWFGWEAIGASYAYREEICPNNGSAFLQTVRLGPVLVNRLVRKSE*
Ga0126373_110910702	3300010048	Tropical Forest Soil	MIARILCTGAALALSGFGFFGDAMLADPLSPFGILFLMVSGVVWFGWNAICDSYAYREEVCPNNGRAFLQTVRLGPVLASGLIRKGD*
Ga0126378_103153901	3300010361	Tropical Forest Soil	YCPRRRDAGQYGSRSAEPRNAMIARLLCTCATLSLSAFGFFGNPVLADPLSPFGIMMLVVSGIVWFGWEAIGASYAYREEICPNNGSAFLQTVRLGPVLVNRLVRKSE*
Ga0126378_104095933	3300010361	Tropical Forest Soil	MIARLLCTGAALGLSAFGFFGNPVVANPLSPFGILLLFVSGVVWFGWDMIAASYAYREEICPNNGRAFLQTVRLGPVLVNGLVRKGE*
Ga0126378_120873511	3300010361	Tropical Forest Soil	MIARVCCTAAALGLAGFGFFDNPGVANPLNPLGIVFLIVSGLVWFGWQMIGDAYAYREELCPNRDHEFLQTERLGPALVNRLVCRDAQLH*
Ga0126381_1001306673	3300010376	Tropical Forest Soil	MIARILCTGAALALSGFGFFGDAMLANPLSPFGILFLMVSGVVWFGWNAICDSYAYREEVCPNNGRAFLQTVRLGPVLASGLIRKGD*
Ga0126381_1009959941	3300010376	Tropical Forest Soil	TAAALGLAGLGFFDNPGVANPLSPFGIVFLIVSGLVWFGWQMIGDAYAYREELCPNRDHEFLQTERLGPALVNRLVCRDAK*
Ga0126350_110557011	3300010880	Boreal Forest Soil	RGMIARILCTGGALLLAAFGFFANPVSANPVSPFGIVFLLVSGVVWFAWDMIRDAYAYRDEVCPNNGRAFLQTVRLGPVLVNRLIRKAD*
Ga0150983_139854091	3300011120	Forest Soil	MIARILCTGAALGLSGFGFFDNPVSANPLSPFGILFLLLSGIVWFGWEAICDAYAYREEVCPNNGRAFLQTVRLGPVLVNRLIKKGE*
Ga0181518_100817902	3300014156	Bog	MTRMIGRIFCVGAALALAAIGFFGGPVPVDPLSPFGILFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKN*
Ga0181521_1000660213	3300014158	Bog	MIGRIFCVGAALALAAIGFFGGPVPVDPLSPFGILFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKN*
Ga0182015_100367205	3300014495	Palsa	MLPMVGRILCTAAALLLAVFGFFENPVAADPLAPFGILFLMLSGVVWFAWDVIGDAYAYREEICPNNGRAFLQTVRLGPVLVNGLVRKETE*
Ga0182024_100197589	3300014501	Permafrost	MIARIFCTSAALGLAGLGFFENPVAASPVNLFGILFLFISGVVWFGWDMIVAAYAYREEICPNNGRAFLQTVRLGPVLVGGLVRKK*
Ga0182024_100931622	3300014501	Permafrost	MVARILCTGAALLLSAFGFFVNPVLSDPLSPFGIVFLLVSGVVWFGWEMIRDAYAYREEICPNKGCAFLQTVRLGPVLVNGLVPKSGD*
Ga0187802_102403291	3300017822	Freshwater Sediment	MAARILCTAAALALSAFGFFGNPVLADPLSPFGILLLLVSGIVWFGWDAIRDAYAYREEICPNNGRAFLQTVRLGPVLVN
Ga0187808_106116391	3300017942	Freshwater Sediment	MAARIFCTGAALLLASIGFFGNPVMETPLSPFGILFLTVSGVVWFGWDVIRDAYAYREEICPNNGRAFLQTVRLGPVTVNWMVRRKTD
Ga0187817_111430821	3300017955	Freshwater Sediment	MAARIFCTGAALLLAAIGFFGNPVMETPLSPFGILFLTVSGGVWFGWDVIRDAYAYREEICPNNGRAFLQTVRLGPVTVNWMVRRKTD
Ga0187779_108549972	3300017959	Tropical Peatland	MIARILATGAALLLAGFGFFANPVAANPLSPFGIVFLLVSGVIWFGWDMIQDAYAYREEIVPNNARSFLQTVRLGPVFVSRLVRKNTE
Ga0187778_106777321	3300017961	Tropical Peatland	MIGRVLCTGAALALAGFGFFANPVMANPLSPFGIMFLLVSGVVWFGWEMIRDAYAYREEICPNNGRAFLQTVRLGPVLVGGLVRKKTS
Ga0187778_106925272	3300017961	Tropical Peatland	MAARILCTAAALALSAFGFFGNPALADPLSPFGILLLLVSGVVWFGWDAIRDAYAYREEICPNNGSAFLQTVRLGPVLVNRLIRKSD
Ga0187781_101835823	3300017972	Tropical Peatland	MVARIFCTGAALGLSGFGFFGNPVAADPLSPFGILFLVIWGVVWFGWNAICDSYAYREEICPNNGRAFLQTVRLGPVLVNRLVKRGD
Ga0187781_106534812	3300017972	Tropical Peatland	MIARTIATAAALSLAAIGFFGGGGPADPLNPLGILFLFLSGVVWFAWDMIGDAYAYREETCPNRGRAFLQTVRLGPVLVAGLMRKNAGD
Ga0187782_104532252	3300017975	Tropical Peatland	MIARTIATGAALSLAAIGFFGSGGPADPLNPLGILFLFLSGVVWFAWDMIGDAYAYREEICPNRGRAFLQTVRLGPVLVAGLMRKNAGD
Ga0187805_103341102	3300018007	Freshwater Sediment	MIARIICTGAILLLGVGGFIGWAPVAPGPLNPFGIVCLALSGVIWFGWDMIQDAYAYREEIAPNNARAFLQTVRLGPVFVSRLVRKNTE
Ga0187871_100051642	3300018042	Peatland	MIGRVLCTGAALALAALGFFGNSVTSEPLNPFGLLFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKK
Ga0187784_1000760110	3300018062	Tropical Peatland	MVARIFCTGAALGLSGFGFFGNPVAADPLSPFGILFLVISGVVWFGWNAICDSYAYREEICPNNGRAFLQTVRLGPVLVNRLVKRGD
Ga0187784_100185201	3300018062	Tropical Peatland	MIARTIATGAALSLAAIGFFGSGGPADPLNPLGILFLFLSGVVWFAWDMIGDAYAYREEICPNRGRAFLQTVRLGPVLVAGLMRKNA
Ga0187769_109329782	3300018086	Tropical Peatland	MAARILCTGATLLLSALGFFGNPVVATPLSPFGILFLVVSGVVWFGWDVIRDAYAYREEICPNNGRAFLQTVRLGPVTVNWMVRSKTD
Ga0187771_104031531	3300018088	Tropical Peatland	MVARIFCTGAALLLAAIGFYTNPAPVALLSPFGILFLAISGVVWFGWDVIRDAYAYREEICPNNAHAFLQTVRLGPVTVNWMVRRKTD
Ga0187770_103042682	3300018090	Tropical Peatland	MVARIFCTGAALLLAGIGFYTNPAPVALLSPFGILFLAISGVVWFGWDVIRDAYAYREEICPNNAHAFLQTVRLGPVTVNWMVRRKTD
Ga0210395_101562623	3300020582	Soil	MIARILCTAAALSLAGFGFFANPVLADPLSPFGILFLLVSGVVWFGWDAICASYAYREEICPNNGRAFLQTVRLGPVLVNRLVRKND
Ga0210401_104097062	3300020583	Soil	MAARILCTAAALALSAFGFFGNPAVADPLSPFGIVFLLVSGVVWFSWDMIQDAYAYREEIVPNNARAFLQTVRLGPIFVSRLVRKNTE
Ga0210405_104745072	3300021171	Soil	MIARVLATGAALLLAGFGFFANPITVNPLSPFGIVFLLVSGVIWFAWDMIQDAYAYREEIAPNNARAFLQTVRLGPVFVSRLVRKNTE
Ga0210396_112401302	3300021180	Soil	MIARMFCTAAALALAGFGFFGNPVLANPFSPFGIVFLLVSGVIWFGWDVIRDSYAYREEICPNHGLAFLQTVRLGPVLVGGLIRKKTD
Ga0210388_102846342	3300021181	Soil	MIARILCTGGALLLAAFGFFANPVSANPVSPFGIVFLLVSGVVWFAWDMIRDAYAYRDEVCPNNGRAFLQTVRLGPVLVNRLIRKAD
Ga0210388_106246463	3300021181	Soil	MIARILCTVAALSLAGFGFFANPVLANPLSPFGVLFLLVSGVVWFGWDGIRASYAYREEICPNNGSAFLQTVRLGPVLISRLVRKGE
Ga0210388_109844802	3300021181	Soil	MIARILCTAAALSLAGFGFFANPVLANPLSPFGILFLLVSGVVWFGWEMIRDAYAYREEICPNNGRAFLQTARLGPVLVNRLVRKGE
Ga0213876_105356002	3300021384	Plant Roots	MIARVCCTGAGLLLAAFGFFAEPVDPGPLAPFGILFLAVSGVIWFGWEMFAAAYAYREEVRPNAAHEFLQGERLGPALVGGLISR
Ga0210393_104678332	3300021401	Soil	VLMVGRILCTGAALSLAAVGFFANPVLANPLSPFGILLLLVSGVVWFGWEAIRDAYAYREEIAPNSGRAYLMTVRLGPVFVSRLVRKGTD
Ga0210393_105910342	3300021401	Soil	MIARVCCTAAALGLAGFGFLGNASVADPLSPFGIVFLILSGVVWFGWEMIGDAYAYREEVCPNRGHEFLQTERLGPALVNRLVGRDIR
Ga0210393_114376622	3300021401	Soil	MAARILCTLAALGLAAFGFFANPENIGPLAPFGILFLVLSGVVWFAWDMIGAAYAYREEICPNNGRAFLQTVRLGPVLVGGLVRRDR
Ga0210397_106276802	3300021403	Soil	MVAKIFATGAALLLAGFGFFGNPVTVNPLSPFGIVFLLVSGVIWFAWDMIQAAYAYREEIAPNNARAFLQTVRLGPVFVSRLVRKNTE
Ga0210383_103119532	3300021407	Soil	MVGRILCTGAALSLAAVGFFANPVLANPLSPFGILLLLVSGVVWFGWEAIRDAYAYREEIAPNSGRAYLMTVRLGPVFVSRLVRKGTD
Ga0210394_100379931	3300021420	Soil	GFGFFGNPVLANPFSPFGIVFLLVSGVIWFGWDVIRDSYAYREEICPNHGRAFLQTVRLGPVLVGGLIRKKTD
Ga0210391_100176466	3300021433	Soil	MVGRVLCTGAALALAALGFFDNPATAWPLNSFGLLFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKSAK
Ga0210398_100142178	3300021477	Soil	MVARIFCTGAALALAGFGFFDSPIAANPLSPFGILFLLISGVVWFGWDAICDSYAYREEICPNQGRAFLQTVRLGPVLVTRLIRKGE
Ga0210398_102110432	3300021477	Soil	MVARILCTAAALLLAVLGFFDNPVTVDPLAPFGILFLVLSGVIWFAWDMIGDAYAYREEICPNNGRAFLQTVRLGPILVNGLIDKELKGRTD
Ga0210410_102836882	3300021479	Soil	MVGRILCTGAALSLAAFGFFANPVLANPLSPFGILLLLVSGVVWFGWEAIRDAYAYREEIAPNSGRAYLMTVRLGPVFVSRLVRKGTD
Ga0210410_103558832	3300021479	Soil	MIARMFCTAAALALAGFGFFGNPVLANPFSPFGIVFLLVSGVIWFGWDVIRDSYAYREEICPNHGRAFLQTVRLGPVLVGGLIRKKTD
Ga0126371_103344013	3300021560	Tropical Forest Soil	MIARICCTAAALGLAGLGFFDNPGVANPLSPFGIVFLIVSGLVWFGWQMIGDAYAYREELCPNRDHEFLQTERLGPALVNRLVAHDAK
Ga0126371_104774242	3300021560	Tropical Forest Soil	MIARICCTAAALGLAGLGFFDNPGVANPLSPFGIVFLIVSGLVWFGWQMIGDAYAYRKELCPNRDHEFLQTERLGPALVNRLVAHDARH
Ga0126371_104859742	3300021560	Tropical Forest Soil	MIARLLCTGAALGLSAFGFFGNPVVANPLSPFGILLLFVSGVVWFGWDMIAASYAYREEICPNNGRAFLQTVRLGPVLVNGLVRKGE
Ga0126371_112091422	3300021560	Tropical Forest Soil	MIARLLCTCATLSLSAFGFFGNPVLADPLSPFGIMMLVVSGIVWFGWEAIGASYAYREEICPNNGSAFLQTVRLGPVLVNRLVRKSE
Ga0126371_117317451	3300021560	Tropical Forest Soil	MIARILCTGAALALSGFGFFDNPVLANPLSPFGILFLMVSGVVWFGWNAICDSYAYRAEVCPNNGRAFLQTVRLGPVLASGLIRKGD
Ga0208220_10058402	3300025627	Arctic Peat Soil	MVTRIFCTAAALLLALFGFFENPVSVHPLAPFGILFLGLSGVIWFAWDVIGDAYAYREEICPNNGRAFLQTVRLGPVLVNGLVRKGTD
Ga0209580_103074162	3300027842	Surface Soil	MVARILATGAALLLAGFGFFANPITVNPLSPFGIVFLLVSGVIWFGWDMIQDAYAYREEIAPNNARAFLQTVRLGPVFVSRLVR
Ga0209517_1000018159	3300027854	Peatlands Soil	MAARILCTAAALALSAFGFLGNPVIANPLSPFGIVFLMISGVVWFGWEMFCDAYDYREEICPNNGHAFLETVRLGPVFVSQLVRKNTE
Ga0209167_100316134	3300027867	Surface Soil	MIARIFCTGAALALAGFGFFANPVSADPLSPFGIMLLVVSGVVWFGWDAIRDSYAYREEVCPNNGRAFLQTVRLGPVLVGGLIRKRID
Ga0209380_102244502	3300027889	Soil	MVGRVLCTGAALALAALGFFGNSVTSEPLNPFGLLFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKK
Ga0209624_100356741	3300027895	Forest Soil	MIARILCTGGALLLAAFGFFANPVSANPVSPFGIVFLLVSGVVWFAWDMIRDAYAYRDEVCPNNGRAFLQTVRLGP
Ga0209624_107774162	3300027895	Forest Soil	AAVAIAGERPDNKLMVGRVLCTGAALALAALGFFDSPATAWPLNSFGLLFLFLSGVVWFAWEMIGDAYAYREEICPNHGRAYLQTVRLGPVLVNGLIRKSAK
Ga0209168_100736063	3300027986	Surface Soil	MIARILCTGGALGLSGFGFFDNPVSADPLSAFGILFLVVSGVVWFGWNAICDSYAYREEICPNNGRAFLQTVRLGPVLVNRLVGKGE
Ga0308309_112653742	3300028906	Soil	MVAKIFATGAALLLAGFGFFGNPVTVNPLSPFGIVFLLVSGVIWFAWDMIQDAYAYREEIVPNHGRAFLQTVRLGPVFVSRLVRKNTD
Ga0265460_111616191	3300030740	Soil	MAARILCTGAALLLAAFGFFGNPIVANPLNPFGIVFLLVSGVVWFAWDMIGDAYAFREEVCPNNGRAFLQTVRLGPVLVNGLVRKNAG
Ga0302325_127802312	3300031234	Palsa	MLCRILCTGAALLLAMLGFCANSVTVDPLSSFGILFLAVSGVVWFAWDMIGDAYAYREEICPSRGRAFLQTVRLGPVPVNGLIRRKTQ
Ga0265325_100689733	3300031241	Rhizosphere	MVARMLCTAAAIGVSAVGFFADPVLANPLSPFGIVFLLVSGVIWFGWDAIGDSYAYREEICPNNGRAFLQTVRLGPVLVNRLVRKGEWPRSSF
Ga0265313_102053072	3300031595	Rhizosphere	MVVKVCCTVVALLLSGLGFFANPALADPLSPFGIVFLMVSGVVWFAWDMIRAGYAYREEICANSGKMFLATERLGPALVDRLVRKGAD
Ga0310686_1118283212	3300031708	Soil	MAARILCTGAALLLAAFGFFGNPIVANPLNPFGIVFLLVSGVVWFAWDMIGDAYAFREEVCPNNGRAFLQTVRLGPVLVNGLVRKTAE
Ga0310686_1175357131	3300031708	Soil	VAIAEERPDNKSMVGRILCTGAALALASIGFFGVPDAIDPLSPFGILFLFLSGVVWFAWEMIGDAYAYREEVCPNRGRAFLQTVRLGPVLVNGLVRKNAE
Ga0307476_104108743	3300031715	Hardwood Forest Soil	MIARILCTVAALALSGFGFFENPVTADPLSLFGILFLAVSGVVWFGWNAICDAYAYREEICPNNGRAFLQTVRLGPVLVNRLVKKGE
Ga0307476_114013402	3300031715	Hardwood Forest Soil	MIARVLATGAALLLAGFGFFANPITVNPLSPFGIVFLLVSGVIWFGWEMIQDAYAYREEIAPNNARAFLQTVRLGPVFVSRLVRKNTE
Ga0335085_1000059839	3300032770	Soil	MVARLLCTVAALGLSGLGFFADPNLADPLSPFGILFLTVSGLVWFGWEAIRASYAYREEICPNSGSTFLLAERLGPATISRLVRRDPP
Ga0335085_118876032	3300032770	Soil	MVARLFCTAAALGLSGLGFFAEPGLADPLSPFGLLFLFVSGLVWFGWDAIRDSYAYREEICPNNGRAFLQTVRLGPVLVNRLVKKAE
Ga0335082_102817602	3300032782	Soil	AALLLSAFGFFANPVLADPLSPFGIVFLAVAGVVWFGWEMIRAAYAYREEICPNNGRAFLQTVRLGPMLVGGLIRKNTS
Ga0335079_101717462	3300032783	Soil	MIGRVLCTGAALALAGFGFFANPVMANPLSPFGIMFLLVSGVVWFGWEMIRDAYAYREEICPNNGRAFLQTVRLGPVLVGGLVRKKTG
Ga0335079_104344142	3300032783	Soil	VTGRIICTGAILLLGVGGFIGWAPAAPGPLNPFGIVCLALSGVVWFAWDMIVASYAYREEICPNNGRAFLQTVRLGPVLVGGLIRKKTG
Ga0335078_114669392	3300032805	Soil	VTGRIICTGAILLLGVGGFIGWAPAAPGPLNPFGIVCLALSGVVWFAWDMIVASYAYREEICPNNGRAFLQTVRLGPVLVGGLIRK
Ga0335081_102684103	3300032892	Soil	MIARIICTGAILLLGVGGFIGWAPAAPGPLNPFGIVCLALSGVVWFAWDMIVASYAYREEICPNNGRAFLQTVRLGPVLVGGLIRKKTG
Ga0335074_100123871	3300032895	Soil	MVARILCTGAALGLSGFGFFENPVSADPLTPFGILFLGVSGVVWFGWNAICDSYAYREEMCPNNGRAFLQTVRLGPVLVGGLIRKGT
Ga0335074_103700442	3300032895	Soil	MLARILCTGAALLLSALGFFANPVMSEPLSPFGIMFLMVSGVVWFGWDMIVAAYAYREEICPNNGRAFLQTVRLGPVLVNRLVRRGD
Ga0335074_106451502	3300032895	Soil	CTGAALGLSGFGFFGNPVLAEPLSPFGVMFLVVSGIVWFGWDAICDAYAYREEVCPNNGRAFLQTVRLGPVLVNGLVTRGE
Ga0335074_106990002	3300032895	Soil	MVARILCTAAALALSGLGFFANPVSSDPLDLFGLLFLVLSGVVWFGWDMIVASYAYREEICPNHGRAFLQTVRL
Ga0335074_113652482	3300032895	Soil	MIARILCTAAALSLAGFGFFANPVLANPLSPFGMLFLLVSGVVWFGWDMIRDAYAYREEICPNNGSAFLQTVRLGPVLVNRLVRRGE
Ga0335075_102293423	3300032896	Soil	MIARLLCTAAALSLAGFGFFANPVLANPLSPFGILFLLVSGIVWFGWDAIRASYAYREEICPSNGSAFLQTVRLGPVLISRLVRKGE
Ga0335075_103224423	3300032896	Soil	MVARILCTGAALGLSGFGFFDNPVSANPLSAFGVLFLVVSGVVWFGWNAISDSYAYREEICPNNGRAFLQTVRLGPVLVNGLVRKSK
Ga0335072_108296102	3300032898	Soil	MIGRIAATGAALLLAALGFFGNPVMTAPLSPFGLLFLALSGVVWFGWDAIGDAYAYREEICPNRGRAFLQTVRLGPVLVNRLVRRGGD
Ga0335072_108881571	3300032898	Soil	MIARLLCTAAALSLAGFGFFANPVLANPLSPFGILFLLVSGIVWFGWDAIRASYAYREEICPSNGSAFLQTVRLGPVLISRL
Ga0335083_104007201	3300032954	Soil	PQRRTTRGPMVARLFCTAAALGLSGLGFFAEPGLADPLSPFGLLFLFVSGLVWFGWDAIRDSYAYREEICPNNGRAFLQTVRLGPVLVNRLVKKAE
Ga0335076_104107261	3300032955	Soil	AARIFCTGAALLLAMIGFFGNPVMETPLSPFGILFLAISGVVWFGWDVIRDAYAYREEICPNNGRAFLQTVRLGPVTVNWIVRSKTD
Ga0335076_110980472	3300032955	Soil	MVARLLCTAAALGLSGLGFFADTGQANPLSPFGLLFLFVSGVVWFGWDSIRASYAYREEICPNNGRAFLQTVRLGPVLVNRLVNKAE
Ga0335073_109551362	3300033134	Soil	MIGRIAATGAALLLAALGFFGNPVMTAPLSPFGLLFLALSGVVWFGWDAIGAAYAYREEICPNRGRAFLQTVRLGPVLVNRLVRRGGD
Ga0335077_100913591	3300033158	Soil	GSGGLAMIGRVLCTGAALALAGFGFFANPVMANPLSPFGIMFLLVSGVVWFGWEMIRDAYAYREEICPNNGRAFLQTVRLGPVLVGGLVRKKTG
Ga0335077_116364112	3300033158	Soil	MTGRIICTGAILLLGVGGFIGWAPAAPGPLNPFGIVCLALSGVVWFAWDMIVASYAYREEICPNNGRAFLQTVRLGPVLVGGLIRKKTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089176

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences