Metagenome Family F089127

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089127
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	163 residues
Representative Sequence	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADLEVRVCASH
Number of Associated Samples	92
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.03 %
% of genes near scaffold ends (potentially truncated)	54.13 %
% of genes from short scaffolds (< 2000 bps)	76.15 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.716 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.431 % of family members)
Environment Ontology (ENVO)	Unclassified (34.862 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.220 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.55% β-sheet: 28.74% Coil/Unstructured: 46.71%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF08279	HTH_11	19.27
PF13280	WYL	13.76
PF02604	PhdYeFM_antitox	8.26
PF02661	Fic	8.26
PF05016	ParE_toxin	5.50
PF01494	FAD_binding_3	2.75
PF00903	Glyoxalase	2.75
PF13302	Acetyltransf_3	1.83
PF00144	Beta-lactamase	1.83
PF13589	HATPase_c_3	0.92
PF03150	CCP_MauG	0.92
PF03795	YCII	0.92
PF08281	Sigma70_r4_2	0.92
PF12713	DUF3806	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	8.26
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	8.26
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	5.50
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.75
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.75
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.75
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.83
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.72 %
Unclassified	root	N/A	41.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.72 %
Unclassified	root	N/A	41.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.72 %
Unclassified	root	N/A	41.28 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.12 %
Unclassified	root	N/A	41.28 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11.01 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3.67 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.75 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.75 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.75 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	3.67 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	2.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.75 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.83 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.92 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	2.75 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	2.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.75 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.92 %
Flagellatimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Flagellatimonas	0.92 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.92 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	2.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.75 %
Nitrosospira briensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira briensis	1.83 %
Rubrivivax albus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → Rubrivivax albus	0.92 %
unclassified Ramlibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter	0.92 %
Flagellatimonas centrodinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Flagellatimonas → Flagellatimonas centrodinii	0.92 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.28 %
Betaproteobacteria bacterium RBG_16_64_18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	2.75 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.75 %
Nitrosospira briensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira briensis	1.83 %
Ramlibacter sp. USB13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. USB13	0.92 %
Rubrivivax albus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → Rubrivivax albus	0.92 %
Flagellatimonas centrodinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Flagellatimonas → Flagellatimonas centrodinii	0.92 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9164406	All Organisms → cellular organisms → Bacteria → Proteobacteria	12678	Open in IMG/M
2162886012\|MBSR1b_contig_1323111	All Organisms → cellular organisms → Bacteria → Proteobacteria	2850	Open in IMG/M
2228664021\|ICCgaii200_c0921358	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300000891\|JGI10214J12806_10209807	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300000891\|JGI10214J12806_11124854	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300003267\|soilL1_10008511	All Organisms → cellular organisms → Bacteria → Proteobacteria	5727	Open in IMG/M
3300003319\|soilL2_10006852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5301	Open in IMG/M
3300004114\|Ga0062593_100117612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1927	Open in IMG/M
3300004156\|Ga0062589_100036610	All Organisms → cellular organisms → Bacteria → Proteobacteria	2582	Open in IMG/M
3300004156\|Ga0062589_100059010	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300004480\|Ga0062592_101384802	Not Available	669	Open in IMG/M
3300004480\|Ga0062592_101384803	Not Available	669	Open in IMG/M
3300005288\|Ga0065714_10253152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	771	Open in IMG/M
3300005328\|Ga0070676_10258154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira briensis	1166	Open in IMG/M
3300005330\|Ga0070690_100624729	Not Available	820	Open in IMG/M
3300005331\|Ga0070670_100088392	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
3300005341\|Ga0070691_10150421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1193	Open in IMG/M
3300005341\|Ga0070691_10238658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	970	Open in IMG/M
3300005345\|Ga0070692_10032992	All Organisms → cellular organisms → Bacteria → Proteobacteria	2608	Open in IMG/M
3300005347\|Ga0070668_100058260	All Organisms → cellular organisms → Bacteria	2988	Open in IMG/M
3300005353\|Ga0070669_100278698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1339	Open in IMG/M
3300005438\|Ga0070701_10615628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RBG_16_64_18	721	Open in IMG/M
3300005438\|Ga0070701_10742085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	664	Open in IMG/M
3300005440\|Ga0070705_100006246	All Organisms → cellular organisms → Bacteria → Proteobacteria	5837	Open in IMG/M
3300005444\|Ga0070694_100081833	Not Available	2247	Open in IMG/M
3300005455\|Ga0070663_100165342	Not Available	1706	Open in IMG/M
3300005455\|Ga0070663_100535224	Not Available	977	Open in IMG/M
3300005530\|Ga0070679_100180295	Not Available	2085	Open in IMG/M
3300005530\|Ga0070679_100781199	Not Available	898	Open in IMG/M
3300005564\|Ga0070664_100588745	Not Available	1031	Open in IMG/M
3300005578\|Ga0068854_100442057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira briensis	1084	Open in IMG/M
3300005718\|Ga0068866_10030256	All Organisms → cellular organisms → Bacteria → Proteobacteria	2597	Open in IMG/M
3300005719\|Ga0068861_100039562	All Organisms → cellular organisms → Bacteria → Proteobacteria	3520	Open in IMG/M
3300005834\|Ga0068851_10498128	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300005844\|Ga0068862_102090395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	577	Open in IMG/M
3300006196\|Ga0075422_10326856	Not Available	663	Open in IMG/M
3300006237\|Ga0097621_101704682	Not Available	600	Open in IMG/M
3300006845\|Ga0075421_100082564	All Organisms → cellular organisms → Bacteria	4053	Open in IMG/M
3300006846\|Ga0075430_100168190	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300006847\|Ga0075431_100444590	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300006847\|Ga0075431_101890418	Not Available	552	Open in IMG/M
3300006852\|Ga0075433_11903530	Not Available	510	Open in IMG/M
3300006853\|Ga0075420_101306776	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300006854\|Ga0075425_100472566	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300006871\|Ga0075434_100391250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300007076\|Ga0075435_101255070	Not Available	649	Open in IMG/M
3300009094\|Ga0111539_10077420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → Rubrivivax albus	3914	Open in IMG/M
3300009094\|Ga0111539_11675049	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300009094\|Ga0111539_12924128	Not Available	553	Open in IMG/M
3300009100\|Ga0075418_10455519	Not Available	1371	Open in IMG/M
3300009147\|Ga0114129_11076242	Not Available	1008	Open in IMG/M
3300009148\|Ga0105243_11531637	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300009156\|Ga0111538_10506592	Not Available	1530	Open in IMG/M
3300009156\|Ga0111538_11354064	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300009156\|Ga0111538_11702436	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300009177\|Ga0105248_11680281	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300010373\|Ga0134128_10198321	All Organisms → cellular organisms → Bacteria → Proteobacteria	2260	Open in IMG/M
3300010375\|Ga0105239_13126874	Not Available	539	Open in IMG/M
3300010399\|Ga0134127_10520835	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300010400\|Ga0134122_10169960	All Organisms → cellular organisms → Bacteria → Proteobacteria	1787	Open in IMG/M
3300010400\|Ga0134122_10217249	All Organisms → cellular organisms → Bacteria → Proteobacteria	1595	Open in IMG/M
3300010403\|Ga0134123_10129383	Not Available	2057	Open in IMG/M
3300012891\|Ga0157305_10059573	Not Available	844	Open in IMG/M
3300012895\|Ga0157309_10086632	Not Available	844	Open in IMG/M
3300012896\|Ga0157303_10070455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Flagellatimonas → Flagellatimonas centrodinii	775	Open in IMG/M
3300012912\|Ga0157306_10152945	Not Available	731	Open in IMG/M
3300012913\|Ga0157298_10350634	Not Available	543	Open in IMG/M
3300013307\|Ga0157372_12191625	Not Available	635	Open in IMG/M
3300014969\|Ga0157376_10296264	All Organisms → cellular organisms → Bacteria → Proteobacteria	1529	Open in IMG/M
3300015371\|Ga0132258_10163694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5352	Open in IMG/M
3300015371\|Ga0132258_10478319	Not Available	3110	Open in IMG/M
3300015372\|Ga0132256_100474983	Not Available	1359	Open in IMG/M
3300015373\|Ga0132257_102573314	Not Available	662	Open in IMG/M
3300015374\|Ga0132255_104120963	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300017792\|Ga0163161_10056012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	2863	Open in IMG/M
3300019356\|Ga0173481_10406087	Not Available	668	Open in IMG/M
3300022880\|Ga0247792_1019877	Not Available	1112	Open in IMG/M
3300025321\|Ga0207656_10413617	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300025899\|Ga0207642_10198902	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M
3300025900\|Ga0207710_10168381	All Organisms → cellular organisms → Bacteria → Proteobacteria	1070	Open in IMG/M
3300025907\|Ga0207645_10064891	Not Available	2333	Open in IMG/M
3300025917\|Ga0207660_10239242	Not Available	1430	Open in IMG/M
3300025918\|Ga0207662_10728533	Not Available	696	Open in IMG/M
3300025927\|Ga0207687_11168716	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300025937\|Ga0207669_11744083	Not Available	532	Open in IMG/M
3300025961\|Ga0207712_10170873	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300026067\|Ga0207678_11893161	Not Available	520	Open in IMG/M
3300026075\|Ga0207708_10291574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1325	Open in IMG/M
3300026095\|Ga0207676_11603539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	649	Open in IMG/M
3300026118\|Ga0207675_100006228	All Organisms → cellular organisms → Bacteria → Proteobacteria	11328	Open in IMG/M
3300027909\|Ga0209382_10023740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7422	Open in IMG/M
3300028379\|Ga0268266_10648253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	1016	Open in IMG/M
3300028381\|Ga0268264_12610332	Not Available	510	Open in IMG/M
3300031538\|Ga0310888_10479351	Not Available	741	Open in IMG/M
3300031548\|Ga0307408_100501945	All Organisms → cellular organisms → Bacteria → Proteobacteria	1062	Open in IMG/M
3300031847\|Ga0310907_10071801	Not Available	1415	Open in IMG/M
3300031854\|Ga0310904_10125963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. USB13	1452	Open in IMG/M
3300031854\|Ga0310904_10172906	Not Available	1277	Open in IMG/M
3300031858\|Ga0310892_10224057	All Organisms → cellular organisms → Bacteria → Proteobacteria	1145	Open in IMG/M
3300031901\|Ga0307406_11549253	Not Available	584	Open in IMG/M
3300031908\|Ga0310900_10289205	Not Available	1199	Open in IMG/M
3300031908\|Ga0310900_10290767	All Organisms → cellular organisms → Bacteria → Proteobacteria	1196	Open in IMG/M
3300032000\|Ga0310903_10535829	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300032002\|Ga0307416_100059209	All Organisms → cellular organisms → Bacteria → Proteobacteria	3111	Open in IMG/M
3300032012\|Ga0310902_11337576	Not Available	508	Open in IMG/M
3300032013\|Ga0310906_11298220	Not Available	532	Open in IMG/M
3300032013\|Ga0310906_11398314	Not Available	513	Open in IMG/M
3300032075\|Ga0310890_10849130	Not Available	726	Open in IMG/M
3300032122\|Ga0310895_10046914	All Organisms → cellular organisms → Bacteria → Proteobacteria	1568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.05%
Environmental	Environmental	44.95%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.05%
Terrestrial	Environmental → Terrestrial	44.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.60%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.52%
Loam	Environmental → Terrestrial → Soil → Loam	11.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.50%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.50%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.75%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03340300	2088090015	Soil	MRHPSRPTAGCLVTLLMVTTTVVADEQPSACKQRWSEVAELEASLKGQRKIPYDPKTNKLKNCHITQPMVSQAVRHAGEPSVAIIVFDVTGSGRVVEQQLIGKKTPWAEAAQQEVSKWLFEPLIEDGIGITRVGVTVAFVAELEGRGQSCGKAQSPVKPDLEVRVCASR
MBSR1b_0022.00007440	2162886012	Miscanthus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH
ICCgaii200_09213582	2228664021	Soil	MVTTTVVADEQPSACKQRWSEVAELEASLKGQRKIPYDPKTNKLKNCHITQPMVSQAVRHAGEPSVAIIVFDVTGSGRVVEQQLIGKKTPWAEAAQQEVSKWLFEPLIEDGIGITRVGVTVAFVAELEGRGQSCGKAQSPVKPDLEVRVCASR
JGI10214J12806_102098071	3300000891	Soil	ARLSPMRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
JGI10214J12806_111248541	3300000891	Soil	LMVTTTVVADEQPSACKQRWSEVAELEASLKGQRKIPYDPKTNKLKNCHITQPMVSQAVRHAGEPSVAIIVFDVTGSGRVVEQQLIGKKTPWAEAAQQEVSKWLFEPLIEDGIGITRVGVTVAFVAELEGRGQSCGKAQSPVKPDLEVRVCASR*
soilL1_100085117	3300003267	Sugarcane Root And Bulk Soil	MLRLLTAIAFSFTALLLACASVLAASPPGCKRTLREITELETSLKHEIKIPFDPTTNPLKSCDITQPLVTSEVRRAGKPSIAIFVFDVTSTGRVAGLQLIGKKSPWAEVAQEEVSQWLFEPLIEGDVGITRVGVTAAVIAELQGRGQSCGQAQSPVKADLEIRVCASH*
soilL2_100068524	3300003319	Sugarcane Root And Bulk Soil	MLRLLAAIAFSFTALLLACTSVLAASPPGCKRTLREITELETSLKHEIKIPFDPTTNPLKSCDITQPLVTSEVRRAGKPSIAIFVFDVTSTGRVAGLQRIGKKSPWAEVAQEEVSQWLFEPLIEGDVGITRVGVTAAVIAELQGRGQSCGQAQSPVKADLEIRVCASH*
Ga0062593_1001176124	3300004114	Soil	MLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0062589_1000366102	3300004156	Soil	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0062589_1000590102	3300004156	Soil	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0062592_1013848021	3300004480	Soil	SFSARLSPMRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0062592_1013848031	3300004480	Soil	MRYSTLAPAACFAALLMLCASVASAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDIGQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGVQLIGKKTPWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVELEGRGQSCGQAQSPVKADLEIRVCASH*
Ga0065714_102531522	3300005288	Miscanthus Rhizosphere	LLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKRSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0070676_102581541	3300005328	Miscanthus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAASTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKSSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQ
Ga0070690_1006247292	3300005330	Switchgrass Rhizosphere	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSP
Ga0070670_1000883921	3300005331	Switchgrass Rhizosphere	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVELEGRGQSCGQAQSPVKADLEIRVCASH*
Ga0070691_101504211	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	ALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0070691_102386582	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	NEGRLAPMRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0070692_100329924	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTDRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0070668_1000582601	3300005347	Switchgrass Rhizosphere	GWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0070669_1002786983	3300005353	Switchgrass Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAV
Ga0070701_106156282	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0070701_107420851	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQAQSPVKADLEVRVCASH*
Ga0070705_1000062463	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAAVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0070694_1000818333	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	YSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0070663_1001653422	3300005455	Corn Rhizosphere	RLSPMRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0070663_1005352242	3300005455	Corn Rhizosphere	EAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0070679_1001802953	3300005530	Corn Rhizosphere	TLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0070679_1007811991	3300005530	Corn Rhizosphere	MVTTTVVADEQPSACKQRWSEVAELEASLKGQRKIPYDPKTNKLKNCHITQPMVSQAVRHAGEPSVAIIVFDVTGSGRVVEQQLIGKKTPWAEAAQQEVSKWLFEPLIEDGIGITRVGVTVAFVAELEGRGQSCGKAQSPVKPDLEVRVCASR*
Ga0070664_1005887452	3300005564	Corn Rhizosphere	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKA
Ga0068854_1004420571	3300005578	Corn Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVC
Ga0068866_100302563	3300005718	Miscanthus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKRSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0068861_1000395623	3300005719	Switchgrass Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGLVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0068851_104981281	3300005834	Corn Rhizosphere	PAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0068862_1020903952	3300005844	Switchgrass Rhizosphere	MLLMVCGSVAAPPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEG
Ga0075422_103268562	3300006196	Populus Rhizosphere	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGLQLIGKKTPWATVAEEEVSQWLFEPLFEGDVGITRVGVTAAVIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0097621_1017046821	3300006237	Miscanthus Rhizosphere	ANEGRLAPMRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKRSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0075421_1000825642	3300006845	Populus Rhizosphere	MLLMVCGLAEAASPPGCKRTLRELTELENSLRREIKIPFDAATSPLKSCDITQPVVTPEVKRSGKASIAIFVFDVTSTGRVAGLQLIGKKTPWADVAQQEVSQWVFEPLVEGDVGITRVGVTASVIAELEGRGQSCGQAASPVKADLEVRVCASH*
Ga0075430_1001681903	3300006846	Populus Rhizosphere	MRRFSEIAACILTLPMVCGWVEAQTAPGCKRSLRELTELENSLKREIKIPFDAAANPLRNCDVTEPVITPEVKRSGKPSIAIFVFDVTSTGRVAGLQLIGKKTPWAEIAQEQVSQWVFEPLVEGDVGITRVGVTAAVIAELEGRGQSCGQAQSPVKADLEVRVCASR*
Ga0075431_1004445902	3300006847	Populus Rhizosphere	MRRCSEIAACILTLPMVCGWVEAQTAPGCKRSLRELTELENSLKREIKIPFDAAANPLRNCDVTEPVITPEVKRSGKPSIAIFVFDVTSTGRVAGLQLIGKKTPWAEIAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAELKGHGQSCGEAQSPVKADLEVRVCASR*
Ga0075431_1018904182	3300006847	Populus Rhizosphere	MRHSTLAPAACFAALLMLCASVESAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDIGQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGVQLIGKKTPWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVE
Ga0075433_119035301	3300006852	Populus Rhizosphere	ANEGRLAPMRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEV
Ga0075420_1013067761	3300006853	Populus Rhizosphere	SCVMRFPILATVLCFTTLLMLDGSVQAAPAPGCKRSLGDLTELETSLKRERKIPFDPAANPLKSCDIGQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGVQLIGKKTPWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVEFEGRGQSCGQAQSPVKADLEIRVCASH*
Ga0075425_1004725662	3300006854	Populus Rhizosphere	MLLMVCGSVAAPPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEGDVGITRVGVTAAVIAEVEGHGQSCGQAQSPVKADLEVRVCASH*
Ga0075434_1003912501	3300006871	Populus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADLEVRVCASH*
Ga0075435_1012550701	3300007076	Populus Rhizosphere	MLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVAQPTVPSDVKRAGKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGQGQSCGQAQSPVKADLEVRVCASH*
Ga0111539_100774204	3300009094	Populus Rhizosphere	MRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVKQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGLQLIGKKTPWATVAEEEVSQWLFEPLFEGDVGITRVGVTAAVIAELEGRGQSCGQAQSPVKADLEIRVCASH*
Ga0111539_116750492	3300009094	Populus Rhizosphere	MRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0111539_129241282	3300009094	Populus Rhizosphere	MRRSTSASAACYAMLLMVCGSVAAPPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEGDVGITRVGVTAAVIAEVEGHGQSCGPSP
Ga0075418_104555192	3300009100	Populus Rhizosphere	MRHSTLAPAACFAALLMLCASVESAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDIGQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGVQLIGKKTPWAEIAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAELKGHGQSCGEAQSPV
Ga0114129_110762422	3300009147	Populus Rhizosphere	MRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVKQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGVQLIGKKTPWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIAELEGRGQSCGQAQSPVKADLEIRVCASH*
Ga0105243_115316372	3300009148	Miscanthus Rhizosphere	LGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0111538_105065922	3300009156	Populus Rhizosphere	MRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVKQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGLQLIGKKTSWATVAEEEVSQWLFEPLFEGDVGITRVGVTAAVIAELEGRGQSCGQAQSPVKADLEIRVCASH*
Ga0111538_113540642	3300009156	Populus Rhizosphere	AAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0111538_117024362	3300009156	Populus Rhizosphere	MRRTTSATAACYAMLLMVCGSVAAAPPACKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQAQSPVKADLEVRVCASH*
Ga0105248_116802811	3300009177	Switchgrass Rhizosphere	MRRSTSASAACYAMLLMVCGSVAAAPPPGCNRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLFEGDVGITRVGVTAAVIAEVEGHGQACGQAQSPVKADLEVRVCASH*
Ga0134128_101983212	3300010373	Terrestrial Soil	MPRSLPAIVACFVALVLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0105239_131268741	3300010375	Corn Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQ
Ga0134127_105208352	3300010399	Terrestrial Soil	MRRSTSASAACYAMLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQAQSPVKPDLEVRVCASH*
Ga0134122_101699602	3300010400	Terrestrial Soil	MRRTTSATAACYAMLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQLCGQALSPVKADLEVRVCASH*
Ga0134122_102172491	3300010400	Terrestrial Soil	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSC
Ga0134123_101293831	3300010403	Terrestrial Soil	MRRSTSASAACYAMLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQALSPVKADLEVRVCASH*
Ga0157305_100595731	3300012891	Soil	MRHSTLASAACFAALLMLCASVASAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH*
Ga0157309_100866322	3300012895	Soil	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRVGKPSVAIFVFDVTSAGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0157303_100704551	3300012896	Soil	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFESLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0157306_101529451	3300012912	Soil	MRHSTLASAACFAALLMLCASVASAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGVQLIGKKTPWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVI
Ga0157298_103506341	3300012913	Soil	MPRSLPAIVACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVIAA
Ga0157372_121916252	3300013307	Corn Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVI
Ga0157376_102962642	3300014969	Miscanthus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQPPVKADFEVRVCASH*
Ga0132258_101636945	3300015371	Arabidopsis Rhizosphere	MRRSIAAIIASFVALLLAGDLTAAAPTPGCKLSLRELTELETSLKREIKIPFDPNANPLKNCDISQPSVEVAKRAGKSSIAIFVFDVTSTGRVAGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAETEGHGQSCGQVRSPVKADLEVRVCASK*
Ga0132258_104783193	3300015371	Arabidopsis Rhizosphere	MRRTTSATAACYAMLLMVCGSVAAAPPACKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEGDVGITRVGVTAAGIAEVEGQGQSCGQAQSPVKADLEVRVCASH*
Ga0132256_1004749832	3300015372	Arabidopsis Rhizosphere	EGRLAPMRRSIAAIIASFVALLLAGDLTAAAPTPGCKLSLRELTELETSLKREIKIPFDPNANPLKNCDITQPSVEVAKRAGKSSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH*
Ga0132257_1025733141	3300015373	Arabidopsis Rhizosphere	MRRSIAAIIASFVALLLAGDLTAAAPTPGCKLSLRELTELETSLKREIKIPFDPNANPLKNCDITQPSVEVAKRAGKSSIAIFVFDVTSTGRVAGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAETEGHGQSCGQVRSPVKADLEVRVCASK*
Ga0132255_1041209632	3300015374	Arabidopsis Rhizosphere	LMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEGDVGITRVGVTAAVIAEVEGQGQSCGQAQSPVKADLEVRVCASH*
Ga0163161_100560124	3300017792	Switchgrass Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVMADFEVRVCASH
Ga0173481_104060871	3300019356	Soil	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHS
Ga0247792_10198772	3300022880	Soil	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADL
Ga0207656_104136172	3300025321	Corn Rhizosphere	EAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH
Ga0207642_101989022	3300025899	Miscanthus Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKRSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH
Ga0207710_101683811	3300025900	Switchgrass Rhizosphere	KFSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAAVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH
Ga0207645_100648913	3300025907	Miscanthus Rhizosphere	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCAS
Ga0207660_102392421	3300025917	Corn Rhizosphere	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSC
Ga0207662_107285331	3300025918	Switchgrass Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKRSIAIFVFDVTSTGRVVGLQLIGKKTPWAAVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH
Ga0207687_111687161	3300025927	Miscanthus Rhizosphere	MLLMVCGSVAAPPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVMQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAE
Ga0207669_117440831	3300025937	Miscanthus Rhizosphere	MRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEG
Ga0207712_101708734	3300025961	Switchgrass Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVE
Ga0207678_118931611	3300026067	Corn Rhizosphere	RNSFSARLSPMRGWYSSACTLGVMRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSC
Ga0207708_102915743	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRHSTLASAACFAALLMLCGLGNAAPAPGCKRSLSELTELETSLKRERKIPFDPAANPLKSCDVTQPVVGSQVRRAGKPSVAIFVFDVTSTGRVSGLQLIGKKTPWAEVAQEEVSRWLFEPLFEGDVGITRVGVTAALIAELEGRGQSCGQVQSPVKADLEIRVCASH
Ga0207676_116035392	3300026095	Switchgrass Rhizosphere	MLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQAQSPVKADLEVRVCASH
Ga0207675_10000622810	3300026118	Switchgrass Rhizosphere	MRRTTSATAACYAMLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQAQSPVKPDLEVRVCASH
Ga0209382_100237406	3300027909	Populus Rhizosphere	MLLMVCGLAEAASPPGCKRTLRELTELENSLRREIKIPFDAATSPLKSCDITQPVVTPEVKRSGKASIAIFVFDVTSTGRVAGLQLIGKKTPWADVAQQEVSQWVFEPLVEGDVGITRVGVTASVIAELEGRGQSCGQAASPVKADLEVRVCASH
Ga0268266_106482531	3300028379	Switchgrass Rhizosphere	MRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGR
Ga0268264_126103321	3300028381	Switchgrass Rhizosphere	MLLMVCGSVAAAPPPGCKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQ
Ga0310888_104793512	3300031538	Soil	RLALRLIWFAVLAMACESLVAAPAPGCKRNLRELTELETFLKREIKIPFDPKTNPVKGCDVTQPVVTSEVRRAGKPSIAIFVFDVTSTGRVTGLQLIGKKTHWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVELEGRGQSCGQAQTPVKPDLEIRVCASR
Ga0307408_1005019452	3300031548	Rhizosphere	RYPMCRLASMRRSISAIAACFAMLLLVCASVEAAPPPGCKRGLRELTELETSLKRERKVPFDPKENPLKSCQVTQPFVSPGLKRSGLPSVAIFVLDVTSAGRVADLQRIGKKTAWSETAQHEVSQWVFEPLIEGDVGITRVGVTVAVIAELEGRGQSCGKIQSPVKPDLEIRVCAVH
Ga0310907_100718011	3300031847	Soil	RLAPMRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH
Ga0310904_101259632	3300031854	Soil	MSSRLALRLIWFAVLAMACESLVAAPAPGCKRNLRELTELETFLKREIKIPFDPKTNPVKGCDITQPVVTSEVRRAGKPSIAIFVFDVTSTGRVTGLQLIGKKTHWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVELEGRGQSCGQAQTPVKPDLEIRVCASR
Ga0310904_101729062	3300031854	Soil	MRYSTLVPAACFAALLMLCASVESAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDIGQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGLQLIGKKTPWATVAEEEVSQWLFEPLFEGDVGIMRVGVTAAVIAEFEGRGQSCGQAQSPVKADLEIRVCASH
Ga0310892_102240572	3300031858	Soil	LRAHMSSRLALRLIWFAVLAMACESLVAAPAPGCKRNLRELTELETFLKREIKIPFDPKTNPVKGCDITQPVVTSEVRRAGKPSIAIFVFDVTSTGRVTGLQLIGKKTHWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVELEGRGQSCGQAQSPVKPDLEIRVCASR
Ga0307406_115492531	3300031901	Rhizosphere	LWVVLYRDTGAGEHGGDSRPSTLAAACFAALLMLCGSVEAAPTPGCKRSLRDLTELETSLKRERKIPFDPTANPLKSCDVKQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGLQRIGKKTPWAEVAQEEVSQWLFEPLFEGDVGITRVGVTVAVIAELEGRGQSCGQAQSPVKADLEIRVCASP
Ga0310900_102892051	3300031908	Soil	MRHSTLAPAACFAALLMLCASVESAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDIGQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGLQLIGKKTPWATVAEEEVSQWLFEPLFEGDVGIMRVGVTAAVIAEFEGRGQSCGQAQSPVKADLEIRVCAS
Ga0310900_102907673	3300031908	Soil	LKAHMSSRLALRLIWFAVLAMACESLVAAPAPGCKRNLRELTELETFLKREIKIPFDPKTNPVKGCDVTQPVVTSEVRRAGKPSIAIFVFDVTSTGRVTGLQLIGKKTHWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVELEGRGQSCGQAQTPVKPDLEIRVCASR
Ga0310903_105358291	3300032000	Soil	AAPPACKRTLREITELETSLKREIKVPFDPQANPLKSCDVTQPTVPSDVKRASKPSIAIFVFDVTSTGRVAGLQLIGKKTHWAEIAQEEVSQWLFEPLVEADVGITRVGVTAAVIAEVEGHGQSCGQAQSPVKADLEVRVCASH
Ga0307416_1000592091	3300032002	Rhizosphere	RRSISAIAACFAMLLLVCASVEAAPPPGCKRGLRELTELETSLKRERKVPFDPKENPLKSCQVTQPFVSPGLKRSGLPSVAIFVLDVTSAGRVADLQRIGKKTAWSETAQHEVSQWVFEPLIEGDVGITRVGVTVAVIAELEGRGQSCGKIQSPVKPDLEIRVCAVH
Ga0310902_113375761	3300032012	Soil	DGTAARVHSRVMRYSTLAPAACFAALLMLCASVESAPAPGCKRSLHDLTELESSLKRERKIPFDPAANPLKSCDIGQPVVGSQVRRAGKPSIAIFVFDVTSTGRVSGLQLIGKKTPWATVAEEEVSQWLFEPLFEGDVGIMRVGVTAAVIAEFEGRGQSCGQAQSPVK
Ga0310906_112982201	3300032013	Soil	MSSRLALRLIWFAVLAMACESLVAAPAPGCKRNLRELTELETFLKREIKIPFDPQTNPVKGCDITQPVVTSEVRRAGKPSIAIFVFDVTSTGRVTGLQLIGKKTHWAEVAQEEVSQWLFEPLFEGDVGIMRVGVTAAVIAEFEGRGQSCGQA
Ga0310906_113983141	3300032013	Soil	GLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH
Ga0310890_108491301	3300032075	Soil	MRRPCASWTWARGLMRVQCAKCSPHSRLEAHMSSRLALRLIWFAVLAMACESLVAAPAPGCKRNLRELTELETFLKREIKIPFDPKTNPVKGCDITQPVVTSEVRRAGKPSIAIFVFDVTSTGRVTGLQLIGKKTHWAEVAQEEVSQWLFEPLFEGDVGITRVGVTAAVIVELEGRGQSCGQAQTPVKPDLEIRVCASR
Ga0310895_100469141	3300032122	Soil	NEGRLAPMRRSLPAIIACFVALLLAGGLTEAAPTPGCKLSLSELTELETSLKREIKIPFDASANPLKGCDITQPAVEAAKRAGKPSIAIFVFDVTSTGRVVGLQLIGKKTPWAEVAQEEVSQWVFEPLVEGDVGITRVGVTAAVIAEVEGRGHSCGQAQSPVKADFEVRVCASH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089127

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences