Metagenome Family F089080

Basic Information
Family ID	F089080
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	54 residues
Representative Sequence	MPDTPLRGRRGRDRRIAERVATDFAARHAPPSPDDEVDFDVAAVDAEVED
Number of Associated Samples	97
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.24 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.58 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.771 % of family members)
Environment Ontology (ENVO)	Unclassified (29.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.789 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.59% β-sheet: 0.00% Coil/Unstructured: 56.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01195	Pept_tRNA_hydro	89.91
PF02130	YbeY	6.42
PF01966	HD	0.92
PF04542	Sigma70_r2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0193	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	89.91
COG0319	ssRNA-specific RNase YbeY, 16S rRNA maturation enzyme	Translation, ribosomal structure and biogenesis [J]	6.42
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.92
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.92
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.92
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.92

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.24 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	85.32 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	33.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	33.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Thermomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales	33.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	33.03 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090013\|LWAnNN_GHFF8UE02H89EY	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	556	Open in IMG/M
2124908016\|OU_2_1_1_newblercontig64858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	783	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100770416	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300000956\|JGI10216J12902_104405219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	567	Open in IMG/M
3300001536\|A1565W1_10827993	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300001991\|JGI24743J22301_10067251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	744	Open in IMG/M
3300004081\|Ga0063454_100483216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	864	Open in IMG/M
3300004114\|Ga0062593_101043200	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300004153\|Ga0063455_101123161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	582	Open in IMG/M
3300004156\|Ga0062589_100926972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	805	Open in IMG/M
3300004479\|Ga0062595_100694195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	816	Open in IMG/M
3300004479\|Ga0062595_100743214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	797	Open in IMG/M
3300004479\|Ga0062595_101405969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	636	Open in IMG/M
3300004480\|Ga0062592_101072291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	743	Open in IMG/M
3300005093\|Ga0062594_101714454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	657	Open in IMG/M
3300005330\|Ga0070690_100609551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	830	Open in IMG/M
3300005330\|Ga0070690_101456971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	552	Open in IMG/M
3300005335\|Ga0070666_11275894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	548	Open in IMG/M
3300005338\|Ga0068868_101656870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	602	Open in IMG/M
3300005347\|Ga0070668_100484929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1068	Open in IMG/M
3300005355\|Ga0070671_101558938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	585	Open in IMG/M
3300005440\|Ga0070705_100079089	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300005456\|Ga0070678_101568582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	618	Open in IMG/M
3300005468\|Ga0070707_100647672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1019	Open in IMG/M
3300005535\|Ga0070684_101752448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	586	Open in IMG/M
3300005545\|Ga0070695_101505037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	560	Open in IMG/M
3300005564\|Ga0070664_100061551	All Organisms → cellular organisms → Bacteria	3199	Open in IMG/M
3300005718\|Ga0068866_11364818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	517	Open in IMG/M
3300005764\|Ga0066903_103438101	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300006237\|Ga0097621_100609904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	998	Open in IMG/M
3300006876\|Ga0079217_11473887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	536	Open in IMG/M
3300006894\|Ga0079215_10823288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	652	Open in IMG/M
3300006903\|Ga0075426_10300211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1175	Open in IMG/M
3300006904\|Ga0075424_102532096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	537	Open in IMG/M
3300007004\|Ga0079218_11724501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	696	Open in IMG/M
3300007004\|Ga0079218_11924943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	670	Open in IMG/M
3300009093\|Ga0105240_11878378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	623	Open in IMG/M
3300009147\|Ga0114129_10733457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1266	Open in IMG/M
3300009789\|Ga0126307_11157214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	626	Open in IMG/M
3300010375\|Ga0105239_10325036	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300010403\|Ga0134123_10116096	All Organisms → cellular organisms → Bacteria	2160	Open in IMG/M
3300010403\|Ga0134123_10149065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1933	Open in IMG/M
3300011264\|Ga0151623_1128913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	953	Open in IMG/M
3300011431\|Ga0137438_1130216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	771	Open in IMG/M
3300011439\|Ga0137432_1292433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	521	Open in IMG/M
3300011991\|Ga0120153_1030602	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300012094\|Ga0136638_10016734	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300012204\|Ga0137374_10992099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	608	Open in IMG/M
3300012895\|Ga0157309_10266202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	565	Open in IMG/M
3300012901\|Ga0157288_10195063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	641	Open in IMG/M
3300012908\|Ga0157286_10109637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	824	Open in IMG/M
3300012955\|Ga0164298_11074380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	600	Open in IMG/M
3300012984\|Ga0164309_11491382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	578	Open in IMG/M
3300012985\|Ga0164308_11292156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	662	Open in IMG/M
3300012985\|Ga0164308_11900079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	555	Open in IMG/M
3300012986\|Ga0164304_10693685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	773	Open in IMG/M
3300012989\|Ga0164305_11497415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	598	Open in IMG/M
3300013297\|Ga0157378_11640473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	689	Open in IMG/M
3300014259\|Ga0075311_1178891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	501	Open in IMG/M
3300015200\|Ga0173480_10281938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	919	Open in IMG/M
3300015201\|Ga0173478_10229030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	799	Open in IMG/M
3300015201\|Ga0173478_10756161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	527	Open in IMG/M
3300018029\|Ga0187787_10330230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	581	Open in IMG/M
3300018054\|Ga0184621_10183485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	751	Open in IMG/M
3300018084\|Ga0184629_10123734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1290	Open in IMG/M
3300018422\|Ga0190265_12649162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	598	Open in IMG/M
3300021080\|Ga0210382_10206631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	854	Open in IMG/M
3300022309\|Ga0224510_10502990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	721	Open in IMG/M
3300024055\|Ga0247794_10261728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	574	Open in IMG/M
3300024055\|Ga0247794_10280706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	557	Open in IMG/M
3300025907\|Ga0207645_10817573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	634	Open in IMG/M
3300025907\|Ga0207645_11012815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	562	Open in IMG/M
3300025917\|Ga0207660_11515200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	542	Open in IMG/M
3300025932\|Ga0207690_10121608	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300025935\|Ga0207709_10680310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	822	Open in IMG/M
3300025941\|Ga0207711_11304368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	668	Open in IMG/M
3300026088\|Ga0207641_12026133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	577	Open in IMG/M
3300026095\|Ga0207676_10849900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	893	Open in IMG/M
3300028708\|Ga0307295_10121189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	715	Open in IMG/M
3300028768\|Ga0307280_10351404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	544	Open in IMG/M
3300028782\|Ga0307306_10098925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	775	Open in IMG/M
3300028787\|Ga0307323_10168636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	791	Open in IMG/M
3300028791\|Ga0307290_10103991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1036	Open in IMG/M
3300028791\|Ga0307290_10222146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	692	Open in IMG/M
3300028802\|Ga0307503_10559722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	625	Open in IMG/M
3300028803\|Ga0307281_10013438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2296	Open in IMG/M
3300028819\|Ga0307296_10473614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	685	Open in IMG/M
3300028824\|Ga0307310_10324838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	753	Open in IMG/M
3300028828\|Ga0307312_10057675	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300028878\|Ga0307278_10115652	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300028878\|Ga0307278_10478796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	544	Open in IMG/M
3300030336\|Ga0247826_10227968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1294	Open in IMG/M
3300030943\|Ga0311366_10070464	All Organisms → cellular organisms → Bacteria	3003	Open in IMG/M
3300031232\|Ga0302323_100307799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1645	Open in IMG/M
3300031716\|Ga0310813_10271269	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300031736\|Ga0318501_10695959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	560	Open in IMG/M
3300031795\|Ga0318557_10377523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	651	Open in IMG/M
3300031796\|Ga0318576_10368387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	679	Open in IMG/M
3300031819\|Ga0318568_10964703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	527	Open in IMG/M
3300031834\|Ga0315290_10545910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1009	Open in IMG/M
3300031834\|Ga0315290_11317361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	595	Open in IMG/M
3300031854\|Ga0310904_10489614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	823	Open in IMG/M
3300031911\|Ga0307412_10495442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1016	Open in IMG/M
3300031947\|Ga0310909_11240187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	602	Open in IMG/M
3300032003\|Ga0310897_10654738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	523	Open in IMG/M
3300032013\|Ga0310906_10599835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	759	Open in IMG/M
3300033417\|Ga0214471_10678376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	812	Open in IMG/M
3300033433\|Ga0326726_11606317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	633	Open in IMG/M
3300034178\|Ga0364934_0087814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1165	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.90%
Host-Associated	Host-Associated	21.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.89%
Plants	Host-Associated → Plants	21.10%
Aquatic	Environmental → Aquatic	10.09%
Unclassified	Environmental → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.68%
Freshwater	Environmental → Aquatic → Freshwater	5.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.50%
Sediment	Environmental → Aquatic → Sediment	3.67%
Peat	Environmental → Terrestrial → Peat	2.75%
Marine	Environmental → Aquatic → Marine	0.92%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%
Unclassified	Environmental → Unclassified → Unclassified	0.92%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.21%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.75%
Lake	Environmental → Aquatic → Freshwater → Lake	1.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Ice	Environmental → Aquatic → Freshwater → Ice	0.92%
Sediment	Environmental → Aquatic → Marine → Sediment	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.92%
Acid Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.92%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.92%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage → Sediment	0.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.92%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090013	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13Cmethane anaerobic no nitrate	Environmental	Open in IMG/M
2124908016	Sample 642	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011264	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M16 k-mer 63	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnNN_05919680	2088090013	Freshwater Sediment	MPTPPLRGRRGRDRRIADRVASDFAARHAPPAPGAGDAVDFDIAAVDAEVEDARRPTPTTRSP
OU_02478660	2124908016		MPESPRPPLRGRRGRDRRIAERVAADFATRHAPPTDEALGFDVAAVDAEVEDARRDAARAPRKPP
INPhiseqgaiiFebDRAFT_1007704163	3300000364	Soil	VPDTPLRGRRGRDRRIGEKVATDFAARHAPRSADDEVDFDLAAV
JGI10216J12902_1044052191	3300000956	Soil	MADRDTPIRGRRGRDRRIAEKVAADFAARHATPTPEAEIDFDIAAVDAEVEDARRPARP
A1565W1_108279931	3300001536	Permafrost	VPDTPLRGRRGRDRRIAERVATDFAARHAARAPESETDFDVAAVDAEVADARR
JGI24743J22301_100672512	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MPESTPPTLRGRRGRDRRIAERVAEEFASRHAATNDEDAVDFDVAAVDAEV
Ga0063454_1004832161	3300004081	Soil	MPDTPLRGRRGRDRRIAERVATDFAARHAPPRPENETDFDV
Ga0062593_1010432002	3300004114	Soil	MPESTTPPLRGRRGRDRRIAEQVAAEFAARHAPPRDEDAIDFDIGAVDAEVEDARRAEA
Ga0063455_1011231612	3300004153	Soil	MPDTPLRGRRGRDRRIAERVATEFAERHAPPRPENETDFDVAAVDAEV
Ga0062589_1009269721	3300004156	Soil	MAGTPLRGRRGRDRRIAEQVATDFATRHAPSRPEDEVDFDVGEVDAEVADARRAE
Ga0062595_1006941951	3300004479	Soil	MPESTPPTLRGRRGRDRRIAERIAEEFASRHAAKNDEDAVDFDVAAVDAEVEDARRA
Ga0062595_1007432142	3300004479	Soil	MAGTPLRGRRGRDRRIAERVATDFATRHAPPRPEDELDFDVAEVDAE
Ga0062595_1014059691	3300004479	Soil	MPESTPPTLRGRRGRDRRIAERVAEEFATRHAPRVDEDAVDFDVAAVDAEVEDA
Ga0062592_1010722912	3300004480	Soil	VPDTPLRGRRGRDRRIAERVATDFATRHAPPSPDDEIDFDVAAVDAEVE
Ga0062594_1017144542	3300005093	Soil	MPDTPLRGRRGRDRRIAERVATDFAARHAPTPADQEVDFDVAAVDAEVD
Ga0070690_1006095512	3300005330	Switchgrass Rhizosphere	MPDTPLRGRRGRDRRIAERVATDFAARHAPPSPDDEVDFDVAAVDAEVED
Ga0070690_1014569712	3300005330	Switchgrass Rhizosphere	MPDTPLRGRRGRDRRIAERIATEFAERHAKPRPDAEAEVDFDVA
Ga0070666_112758942	3300005335	Switchgrass Rhizosphere	MPDTPLRGRRGRDRRISERVATDFAARHAGPSPETEIDFDVAAVDAEVE
Ga0068868_1016568701	3300005338	Miscanthus Rhizosphere	MRGRRGRDRRIAERVATDFAARHAPPSPDEEVDFDVAAVDAEVEDARRVPPKPRPA
Ga0070668_1004849292	3300005347	Switchgrass Rhizosphere	MRGRRGRDRRIAERVATEFAARHAPPKPEDEVDFDVAAVDAEVADA
Ga0070671_1015589381	3300005355	Switchgrass Rhizosphere	MPDTPLRGRRGRDRRISERVATDFAARHAGPSPETEIDFDV
Ga0070705_1000790891	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPESTTPPLRGRRGRDRRIAEEVARDFAARHAPPADDDVVDFDIGAVDAEVDDARRAEAG
Ga0070678_1015685821	3300005456	Miscanthus Rhizosphere	MPDTPLRGRRGRDRRIAERVATDFAARHAPPSPDDEVDFDVAAVDAEVEDARRLPPK
Ga0070707_1006476721	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPESTTPPLRGRRGRDRRIAEDVARDFAARHAPPTDDAVVDFDIGAVDAEVEDARGA
Ga0070684_1017524482	3300005535	Corn Rhizosphere	MPDTPLRGRRGRDRRIAERVATDFAARHAGPPPDTEVDFDIAAVDAEVEDARRP
Ga0070695_1015050372	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAGTPHRGRRGRDRRIAEQVATDFASRHAPPRPEDEVDFDVGEVDAEVADAR
Ga0070664_1000615514	3300005564	Corn Rhizosphere	MPESTPPTLRGRRGRDRRIAERVAEEFASRHAAKNDEDAVDFDVAAVDAEVEDARRAPARATTR
Ga0068866_113648182	3300005718	Miscanthus Rhizosphere	VPETPRRGRRGRDRRIAERVATEFAARHAPPKPEDEVDFDVAAVDAEV
Ga0066903_1034381012	3300005764	Tropical Forest Soil	VPTPPLRGRRGRDRRIAERVATEFATRHAPPKPEDQVDFDVAEVDAEAEDARRAEADVGDDGA
Ga0097621_1006099041	3300006237	Miscanthus Rhizosphere	MPESTPPTLRGRRGRDRRIAERVAEEFASRHAAKNDEDAVDFDVAAVDAEVEDARRAP
Ga0079217_114738871	3300006876	Agricultural Soil	MPESTTPPLRGRRGRDRRIAEQVARDFASRHPRPKDEDAIDFDIAAVDAEIEDAR
Ga0079215_108232881	3300006894	Agricultural Soil	MPESTTPPLRGRRGRDRRIAEQVARDFASRHPRPKDEDAIDFDIAAVDAE
Ga0075426_103002112	3300006903	Populus Rhizosphere	MPEDAQPPLRGRRGRDRRIAERVAAEFATRHAPPVEPREDALDFDVAAVDAEV
Ga0075424_1025320961	3300006904	Populus Rhizosphere	MPESTPPTLRGRRGRDRRIAERVAEEFASRHAATNDEDAVDFDVAAVDAEVEDARRAPARAT
Ga0079218_117245011	3300007004	Agricultural Soil	MPESTTPPLRGRRGRDRRIAEQVAKDFAARHPRPRDEDIVDFDIGAVDAE
Ga0079218_119249431	3300007004	Agricultural Soil	MPESPRPPLRGRRGRDRRIAEKVAADFATRHAPTRDEDTVDFDVAAVDAE
Ga0105240_118783782	3300009093	Corn Rhizosphere	VPDTPLRGRRGRDRRIAERVATDFAARHAAPTADEMVDFDVAE
Ga0114129_107334573	3300009147	Populus Rhizosphere	MPESTPPTLRGRRGRDRRIAERVAEEFATRHAPRADEDAVDFDVAAVDAEVE
Ga0126307_111572141	3300009789	Serpentine Soil	MPDTPLRGRRGRDRRIAERIATEFATRHAAPRPETETDFDIAAVDAEVADARRREAAATATAE
Ga0105239_103250363	3300010375	Corn Rhizosphere	MAGTPLRGRRGRDRRIAEQVATDFASRHAPPRPEDEVDFDVGEVDAEVAD
Ga0134123_101160961	3300010403	Terrestrial Soil	MAERATPPIRGRRGRDRRLAEQAASTLAARHRPIADEDTVDFDLAAVDAEAEDARRAEAR
Ga0134123_101490651	3300010403	Terrestrial Soil	MADAMAGTMPDSTPPTLRGRRERERRIADRVAADFASRHAPPTDDQVLDFDVAAVDAE
Ga0151623_11289132	3300011264	Sediment	VPAPTPPLRGRRGRDRRIAERVTTEFATRHAPPTREALDFDVAEVDREIEDEERRAARAAGIPR
Ga0137438_11302161	3300011431	Soil	MPTPTPPLRGRRGRDRRIAERVASDFAARHAAPAREALDFDVAE
Ga0137432_12924331	3300011439	Soil	MRGRRGRDRRIAERVATEFAARHAARSAEDQVDFDVAEVDAEVADA
Ga0120153_10306021	3300011991	Permafrost	VPDTPLRGRRGRDRRIAERVATDFAARHAARAPESETDFD
Ga0136638_100167341	3300012094	Polar Desert Sand	MPDRPGSTTPPIRGKRGRDRRIGEEVAAEWAARHAPIAEDAIDFDVAAVDAE
Ga0137374_109920991	3300012204	Vadose Zone Soil	MPTPPLRGRRGRDRRIAEQVTSEFAARHALRNEHAIDFDVAAV
Ga0157309_102662021	3300012895	Soil	MPDTPLRGRRGRDRRIAERVATDFAARHAPPSPDEEVDFDVAAV
Ga0157288_101950632	3300012901	Soil	MRGRRGRDRRIAEEVAKDFAARHPRPKDEDVVDFDIGAVDAEVDDARRAA
Ga0157286_101096372	3300012908	Soil	MRGRRGRDRRIAEQVAADFAARHAPPRDDETLDFDLGAVDAEIEDARRAEAAAAAEGAATAYDDA
Ga0164298_110743802	3300012955	Soil	MPDTPLRGRRGRDRRIAERIATDFATRHTPPRPETETDFDVTAVDAEVADAR
Ga0164309_114913821	3300012984	Soil	MPDTPLRGRRGRDRRIAERVATDFAARHAPPRPENETDFDIAAVDAEVADARRLD
Ga0164308_112921562	3300012985	Soil	MPDTPLRGRRGRDRRIAERIATDFATRHTPQRPETETDFDVAAVDAEVADARRRDAKAIE
Ga0164308_119000792	3300012985	Soil	MPESTTPPLRGRRGRDRRIAEQVAAEFAARHAPPRDEDAIDFDIGAVDAEVEDARRAEADADTAP
Ga0164304_106936852	3300012986	Soil	MPDRPGPSTPPLRGRRGRDRRIAEQVASAFAARHAPPRDDEAIDFDVAEVDAEVAAARRGPVA
Ga0164305_114974151	3300012989	Soil	MPDIPLRGRRGRDRRIAERIATEFAERHAKARPEAEAEVDFDVAAVDAE
Ga0157378_116404732	3300013297	Miscanthus Rhizosphere	MAGTPLRGRRGRDRRIAEQVATDFASRHAPPRPEDEVDFDVGEVDAEVADARRPEAEDGQ
Ga0075311_11788912	3300014259	Natural And Restored Wetlands	MPTPPLRGRRGRDRRIAERVAADFAARHAPPAEEAIDFDIAAVDAEVDDARRPPRPTPA
Ga0173480_102819382	3300015200	Soil	VPDTPLRGRRGRDRRIAERVATDFAARHAPPSPDDEVDFDVGAVDAEVED
Ga0173478_102290302	3300015201	Soil	MRGRRGRDRRIAEQVAADFAARHAAPREDETLDFDVGAVDAEVEDARRAEAAAAA
Ga0173478_107561612	3300015201	Soil	MPDTPLRGRRGRDRRIAERVATDFAARHAPTPADQEVDFDVAAVDAEVDDARRDP
Ga0187787_103302302	3300018029	Tropical Peatland	MPESTTPPMRGRRGRDRRIAERVAADFAARHAPPSAEEAVDFDVAEV
Ga0184621_101834852	3300018054	Groundwater Sediment	MPESTTPPLRGRRGRDRRIAEQVARDFAARHAPPRDDEVTDFDIGAVDAEVEDARRAE
Ga0184629_101237343	3300018084	Groundwater Sediment	MRGRRGRDRRIAERVATEFAARHAAPSAEDEVDFDVAEVDAEVADARRATPAPRAPVKPP
Ga0190265_126491623	3300018422	Soil	MPESTTPPLRGRRGRDRRIAEQVAKDFAARHPRPRDEDLVDFDIGALDAEVEDARRTEAP
Ga0210382_102066312	3300021080	Groundwater Sediment	MPDRPTRATPPLRGRRGRDRRIAEQVASEFAARHAPPRDEDALDFDLAAVGAEV
Ga0224510_105029902	3300022309	Sediment	VPDRPSSEAHRLRGRRGRDRRIGEEVAAAFAARHRGPIDVDTVDFDTAAVDGDVADAR
Ga0247794_102617281	3300024055	Soil	MPESTPPTLRGRRGRDRRIAERVAEEFATRHAPRVDEDAVDFDVAAVDAEVEDARRETVRAPSRKRRRD
Ga0247794_102807061	3300024055	Soil	MPESTTPPLRGRRGRDRRIAEQVAAEFAARHAPPRDEDAIDFDIGAVDAEVEDARRAEAEAESGAAARRTT
Ga0207645_108175732	3300025907	Miscanthus Rhizosphere	MAGTPLRGRRGRDRRIAEQVATDFASRHAPPRPEDEVDFDVGEVDAEV
Ga0207645_110128151	3300025907	Miscanthus Rhizosphere	VPDTPLRGRRGRDRRIAERVATDFATRHAPPSPDDEIDFDVAAVDAEVEDSRRPRPKTQP
Ga0207660_115152001	3300025917	Corn Rhizosphere	MPESTTPPLRGRRGRDRRIAEDVARDFAARHAPPTDEDVVDFDIGAVDAEVDDARRAEAGDGAP
Ga0207690_101216081	3300025932	Corn Rhizosphere	MPESTPPTLRGRRGRDRRIAERVAEEFASRHAAKNDEDAVDFDVAAVDAEVEDARRAPARAPTR
Ga0207709_106803102	3300025935	Miscanthus Rhizosphere	MPTPPLRGRRGRDRRIAEQVAGDFAARHARRDNEALDFDVAETDAEVADAARAEARAAQPARRSRR
Ga0207711_113043681	3300025941	Switchgrass Rhizosphere	MPESTPPTLRGRRGRDRRIAERVAEEFASRHAAKNDEDAVDFDVAAVDAEVEDARRAPARAPTRKRRRD
Ga0207641_120261332	3300026088	Switchgrass Rhizosphere	VPDTPLRGRRGRDRRIAERVATDFAARHAPPSADEEVDFD
Ga0207676_108499002	3300026095	Switchgrass Rhizosphere	VPDTPLRGRRGRDRRIAERVATDFAARHAPPSADEEVDFDIGAVDAEVEDARREPPKP
Ga0307295_101211891	3300028708	Soil	MPESTTPPVRGRRGRDRRIAEDVARDFAARHAPPADEDVVDFDIGAVDAEIEDARRAEARDGAPPRK
Ga0307280_103514042	3300028768	Soil	MPETPMRGRRGRDRRIAERVATDFAARHAAPAPDEAVDF
Ga0307306_100989251	3300028782	Soil	MPETPMRGRRGRDRRIAERVATDFAARHAAPAPDEAVDFDTAAVDAEVEDTRRAPASPRAPA
Ga0307323_101686362	3300028787	Soil	MPESTTPPLRGRRGRDRRIAEDVARDFAARHAPPAEDEVIDFDIGAVDHEIDDARRAEARDGAPP
Ga0307290_101039911	3300028791	Soil	MPESTTPPLRGRRGRDRRIAEQVAKDFAARHAPPRDDEVTDFDIGALDAVVEDARR
Ga0307290_102221461	3300028791	Soil	MPESTTPPLRGRRGRDRRIAEDVARDFAARHAPPAEDEVIDFDIGAVDQEIDDARRAEARDGAPPT
Ga0307503_105597221	3300028802	Soil	MPDTPLRGRRGRDRRIAERVATDFAARHPRPSPETEVDFD
Ga0307281_100134385	3300028803	Soil	MRGRRGRDRRIAERVATEFAARHAAPSAEDEVDFDVAEVDAEVA
Ga0307296_104736141	3300028819	Soil	VPTPPLRGRRGRDRRIAERVATDFAARHAPTKPEHEIDIDAAEVDAEVE
Ga0307310_103248382	3300028824	Soil	MPTPPLRGRRGRDRRIAERVATDFAARHATSPTNGVVDFDVAAVDAEVADAARAE
Ga0307312_100576751	3300028828	Soil	MPESTTPPLRGRRGRDRRIAEDVARDFAARHAPPAEDEVIDFDIGAVDQEIDDARRAEARDGAPPK
Ga0307278_101156523	3300028878	Soil	MPDRPTRATPPLRGRRGRDRRIAEQVASEFAARHAPPRDEDAVDFDVAAVDAEVEDAGRV
Ga0307278_104787961	3300028878	Soil	MPESPRPPLRGRRGRDRRIAERVAADFASRHAPPLDENAPAFDVAAVDAE
Ga0247826_102279681	3300030336	Soil	MPESTTPPLRGRRGRDRRIAEEVAKEFAARHPRPKDEDVVDFDIGAVDAEVDDARRAAARPD
Ga0311366_100704644	3300030943	Fen	MPPLRGRRGRDRRIGERVAADFATRHAPPTDDEGIDFDVAEVDAEVD
Ga0302323_1003077991	3300031232	Fen	MPPLRGRRGRDRRIGERVAADFATRHAPPTDDESIDFDVAEVDAEIDDHR
Ga0310813_102712691	3300031716	Soil	MPESTPPTLRGRRGRDRRIAERIAEEFASRHAAKNDEDAVDFDVAAVDAEVEDARRAPARAPT
Ga0318501_106959592	3300031736	Soil	MAGTPLRGRRGRDRRIAERVATDFATRHAPPRPEDEVDFDVAEVDAEVADALEAQM
Ga0318557_103775231	3300031795	Soil	MAGTPLRGRRGRDRRIAERVATDFATRHAPPRPEDE
Ga0318576_103683872	3300031796	Soil	MAGTPLRGRRGRDRRIAERVATDFATRHAPPRPEDEVDFDVAEVDA
Ga0318568_109647032	3300031819	Soil	MAGTPLRGRRGRDRRIAERVATDFATRHAPPRPEDEVDFDLAEVDAEVAD
Ga0315290_105459102	3300031834	Sediment	MPTPPLRGRRGRDRRIADRVASDFAARHAPPAPGADDAIDFDIAAVDAEVEDARRPTPTTPSPA
Ga0315290_113173611	3300031834	Sediment	MATPPLRGRRGRDRRIAERIATEFAARHSPAPPDEAVDFDVAEVDAEVADARRAPRTPT
Ga0310904_104896141	3300031854	Soil	MPDTPLRGRRGRDRRIAERVATDFAERHARPASETEVDFDVA
Ga0307412_104954421	3300031911	Rhizosphere	MMPDQPGPTLRGRRGRDRRIAERVAADFATRHAPPTDEEAVDFDVAAVDAEVDDA
Ga0310909_112401872	3300031947	Soil	MAGTPLRGRRGRDRRIAERVATDFATRHAPPRPEDEVDFDLAEVDA
Ga0310897_106547382	3300032003	Soil	MPESTPPTLRGRRGRDRRIAERVAEEFASRHAAKNDEDAVDFDVAAVDAEVEDARRAPARAPTRKRRGDEARKSGHR
Ga0310906_105998352	3300032013	Soil	MGDRTSPIRGRRGRDRRIGEKVAADFAARHAPPKDDVALDFDVAAVDAEVEDA
Ga0214471_106783762	3300033417	Soil	VPTPPLRGRRGRDRRIAERVATDFAASHARPAGETVDFDVAAVDAEVEDAA
Ga0326726_116063171	3300033433	Peat Soil	MPTPTPPLRGRRGRDRRIAERVATEFAARHAPPTREALDFDVAEVDREIEDERRRTSLVAVRATA
Ga0364934_0087814_2_178	3300034178	Sediment	MPESTTPPLRGRRGRDRRIAEQVAKDFAARHAPPAEADAIDFDIGAVDAEVEDARRAEA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089080

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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