Metagenome Family F089077

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089077
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	114 residues
Representative Sequence	MERTPIKEQVASVSFIWVDAKGAEHSVTGIVGKPHPVGGDRWSCSYVLEGALEQGEDIVGGDSIQALSLALYGLYHDLIGLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVT
Number of Associated Samples	92
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.93 %
% of genes near scaffold ends (potentially truncated)	38.53 %
% of genes from short scaffolds (< 2000 bps)	85.32 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.128 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (10.092 % of family members)
Environment Ontology (ENVO)	Unclassified (42.202 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.76% β-sheet: 28.28% Coil/Unstructured: 48.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.53.4: CRISPR-associated protein Cas7/Csa2-like	d3ps0a1	3ps0	0.54422
b.176.1.1: AttH-like	d2icha1	2ich	0.54334
d.258.1.1: Chorismate synthase, AroC	d1um0a_	1um0	0.54044
d.58.53.0: automated matches	d4rega_	4reg	0.53333
d.258.1.1: Chorismate synthase, AroC	d7rcaa1	7rca	0.53206

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF08241	Methyltransf_11	10.09
PF01554	MatE	6.42
PF03795	YCII	5.50
PF13649	Methyltransf_25	4.59
PF01544	CorA	3.67
PF12471	GTP_CH_N	0.92
PF08028	Acyl-CoA_dh_2	0.92
PF03176	MMPL	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	5.50
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	3.67
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.92
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.92
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.13 %
Unclassified	root	N/A	45.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.13 %
Unclassified	root	N/A	45.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.13 %
Unclassified	root	N/A	45.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	19.27 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	19.27 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.83 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.92 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	18.35 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	1.83 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	0.92 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	11.93 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	1.83 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.92 %
Marinospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinospirillum	0.92 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	11.01 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1.83 %
Marinospirillum perlucidum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinospirillum → Marinospirillum perlucidum	0.92 %
unclassified Xanthomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → unclassified Xanthomonas	0.92 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	11.01 %
Niastella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella	1.83 %
Xanthomonas sp. Leaf131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → unclassified Xanthomonas → Xanthomonas sp. Leaf131	0.92 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.92 %
Marinospirillum perlucidum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinospirillum → Marinospirillum perlucidum	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.87 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	11.01 %
Niastella koreensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	1.83 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.92 %
Xanthomonas sp. Leaf131	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → unclassified Xanthomonas → Xanthomonas sp. Leaf131	0.92 %
Marinospirillum perlucidum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinospirillum → Marinospirillum perlucidum	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725004\|GPKC_F5V46DG03FPA93	Not Available	504	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105379974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1251	Open in IMG/M
3300004114\|Ga0062593_100034159	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300004114\|Ga0062593_101809094	Not Available	671	Open in IMG/M
3300004153\|Ga0063455_100195219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	994	Open in IMG/M
3300004156\|Ga0062589_100250119	All Organisms → cellular organisms → Bacteria → Proteobacteria	1328	Open in IMG/M
3300004463\|Ga0063356_100024874	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5676	Open in IMG/M
3300005218\|Ga0068996_10181735	Not Available	535	Open in IMG/M
3300005329\|Ga0070683_100007765	All Organisms → cellular organisms → Bacteria	9084	Open in IMG/M
3300005329\|Ga0070683_100233406	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300005329\|Ga0070683_100847447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	876	Open in IMG/M
3300005330\|Ga0070690_100004910	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7477	Open in IMG/M
3300005330\|Ga0070690_100577231	Not Available	851	Open in IMG/M
3300005331\|Ga0070670_100145515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2050	Open in IMG/M
3300005337\|Ga0070682_100702800	Not Available	811	Open in IMG/M
3300005337\|Ga0070682_101486157	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	582	Open in IMG/M
3300005338\|Ga0068868_100951789	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005340\|Ga0070689_101456759	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300005353\|Ga0070669_101521746	Not Available	582	Open in IMG/M
3300005354\|Ga0070675_101530179	Not Available	615	Open in IMG/M
3300005355\|Ga0070671_101624509	Not Available	573	Open in IMG/M
3300005355\|Ga0070671_102057860	Not Available	508	Open in IMG/M
3300005364\|Ga0070673_102411687	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Niastella → Niastella koreensis	500	Open in IMG/M
3300005365\|Ga0070688_100208141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1372	Open in IMG/M
3300005365\|Ga0070688_100264605	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300005367\|Ga0070667_100457819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1166	Open in IMG/M
3300005440\|Ga0070705_100041729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2618	Open in IMG/M
3300005458\|Ga0070681_10054291	All Organisms → cellular organisms → Bacteria	3992	Open in IMG/M
3300005466\|Ga0070685_10885507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300005547\|Ga0070693_100863612	Not Available	675	Open in IMG/M
3300005577\|Ga0068857_101758953	Not Available	606	Open in IMG/M
3300005617\|Ga0068859_100654242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1143	Open in IMG/M
3300005618\|Ga0068864_101431389	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005836\|Ga0074470_10245718	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300005843\|Ga0068860_102335529	Not Available	555	Open in IMG/M
3300006237\|Ga0097621_100858054	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300006237\|Ga0097621_101302651	Not Available	686	Open in IMG/M
3300006237\|Ga0097621_101868653	Not Available	573	Open in IMG/M
3300006358\|Ga0068871_101542456	Not Available	628	Open in IMG/M
3300006844\|Ga0075428_100951711	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300006854\|Ga0075425_100765514	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300009094\|Ga0111539_11661179	Not Available	741	Open in IMG/M
3300009094\|Ga0111539_12843248	Not Available	560	Open in IMG/M
3300009137\|Ga0066709_102215122	Not Available	757	Open in IMG/M
3300009156\|Ga0111538_11119972	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300009156\|Ga0111538_13640303	Not Available	534	Open in IMG/M
3300009678\|Ga0105252_10346384	Not Available	672	Open in IMG/M
3300010362\|Ga0126377_13112675	Not Available	536	Open in IMG/M
3300010397\|Ga0134124_11823346	Not Available	643	Open in IMG/M
3300010400\|Ga0134122_11854389	Not Available	636	Open in IMG/M
3300010403\|Ga0134123_10379647	Not Available	1288	Open in IMG/M
3300011417\|Ga0137326_1059537	Not Available	839	Open in IMG/M
3300011422\|Ga0137425_1197968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → unclassified Xanthomonas → Xanthomonas sp. Leaf131	504	Open in IMG/M
3300011434\|Ga0137464_1115664	Not Available	797	Open in IMG/M
3300011437\|Ga0137429_1248359	Not Available	551	Open in IMG/M
3300011438\|Ga0137451_1029279	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1595	Open in IMG/M
3300011441\|Ga0137452_1235551	Not Available	619	Open in IMG/M
3300011445\|Ga0137427_10082988	Not Available	1284	Open in IMG/M
3300012175\|Ga0137321_1142307	Not Available	535	Open in IMG/M
3300012212\|Ga0150985_108034754	Not Available	666	Open in IMG/M
3300012231\|Ga0137465_1109018	Not Available	832	Open in IMG/M
3300012232\|Ga0137435_1199591	Not Available	613	Open in IMG/M
3300012353\|Ga0137367_10186153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1507	Open in IMG/M
3300012354\|Ga0137366_10580290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	805	Open in IMG/M
3300012469\|Ga0150984_114441800	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300012915\|Ga0157302_10448020	Not Available	545	Open in IMG/M
3300012960\|Ga0164301_11710693	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012961\|Ga0164302_11535176	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	550	Open in IMG/M
3300012984\|Ga0164309_11343720	Not Available	607	Open in IMG/M
3300012986\|Ga0164304_11009488	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300013296\|Ga0157374_10431644	Not Available	1317	Open in IMG/M
3300013296\|Ga0157374_12191041	Not Available	580	Open in IMG/M
3300014318\|Ga0075351_1087896	Not Available	649	Open in IMG/M
3300014325\|Ga0163163_11383133	Not Available	765	Open in IMG/M
3300014745\|Ga0157377_10209442	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300014968\|Ga0157379_11422068	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300014969\|Ga0157376_12744573	Not Available	532	Open in IMG/M
3300015371\|Ga0132258_11059264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2050	Open in IMG/M
3300015371\|Ga0132258_12800255	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300015371\|Ga0132258_13599656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1059	Open in IMG/M
3300015372\|Ga0132256_102751824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	591	Open in IMG/M
3300015374\|Ga0132255_100014638	All Organisms → cellular organisms → Bacteria	9378	Open in IMG/M
3300015374\|Ga0132255_101073295	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300015374\|Ga0132255_102018139	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300018083\|Ga0184628_10062880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1880	Open in IMG/M
3300019361\|Ga0173482_10055137	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300019362\|Ga0173479_10745441	Not Available	534	Open in IMG/M
3300020000\|Ga0193692_1023189	Not Available	1476	Open in IMG/M
3300022756\|Ga0222622_10116194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1673	Open in IMG/M
3300022756\|Ga0222622_10607547	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300024187\|Ga0247672_1004534	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2243	Open in IMG/M
3300025271\|Ga0207666_1007891	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300025315\|Ga0207697_10187498	Not Available	908	Open in IMG/M
3300025893\|Ga0207682_10265940	Not Available	800	Open in IMG/M
3300025899\|Ga0207642_10054937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinospirillum → Marinospirillum perlucidum	1819	Open in IMG/M
3300025912\|Ga0207707_10053637	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	3510	Open in IMG/M
3300025918\|Ga0207662_10047085	Not Available	2553	Open in IMG/M
3300025930\|Ga0207701_10010685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	9036	Open in IMG/M
3300025931\|Ga0207644_10281766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1335	Open in IMG/M
3300025940\|Ga0207691_10959168	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300025944\|Ga0207661_10030442	All Organisms → cellular organisms → Bacteria	4157	Open in IMG/M
3300025960\|Ga0207651_11633936	Not Available	580	Open in IMG/M
3300026095\|Ga0207676_10413006	Not Available	1264	Open in IMG/M
3300026121\|Ga0207683_10191745	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300027907\|Ga0207428_10041883	All Organisms → cellular organisms → Bacteria	3706	Open in IMG/M
3300028768\|Ga0307280_10001280	All Organisms → cellular organisms → Bacteria	6035	Open in IMG/M
3300031538\|Ga0310888_10131403	Not Available	1314	Open in IMG/M
3300031908\|Ga0310900_10112209	Not Available	1773	Open in IMG/M
3300031913\|Ga0310891_10115626	Not Available	840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.88%
Host-Associated	Host-Associated	43.12%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	43.12%
Terrestrial	Environmental → Terrestrial	42.20%
Aquatic	Environmental → Aquatic	14.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.60%
Sediment	Environmental → Aquatic → Sediment	13.76%
Roots	Host-Associated → Plants → Roots	4.59%
Marine	Environmental → Aquatic → Marine	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.77%
Loam	Environmental → Terrestrial → Soil → Loam	16.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	13.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.42%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.59%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	13.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	10.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	6.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.75%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_07794300	2067725004	Soil	MSRTTIQEPIASVAFIWVDATGAQLPVQGVVGKPYRVGEEQWACAYALDGALEQGPDIVGFDSIQALSLALYGLYHDLIRLLNDGGRLLNPRTHEPFDLVTLKATFSRST
INPhiseqgaiiFebDRAFT_1053799742	3300000364	Soil	MERTEIKDPIASVSFIWVDAKGREHSVTGIVDKPFPIADDHWACTYVLEGALDQGEEIVGGDSMQALSLALYGLYHDLIRLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVG*
Ga0062593_1000341592	3300004114	Soil	MKRTQIQEPVASVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0062593_1018090942	3300004114	Soil	MSRTTIQEPIASVAFIWVDASGAQLPVKGVVGKPYRVGDDQWACAYALDGALDQGPDIVGLDSIQALSLALYGLYHDLIRLLNDGGRLLNPRTREPFDLITLKATFSRSTSQFNIVP*
Ga0063455_1001952192	3300004153	Soil	VIKEPVASVAFIWVDPKGAERPVKGTVSTPYQIGDDQWACAYRLEGVLEPGPDIAGVDSIQALSLALYGLYHDLIGLLDSGGQLLHPKTRQPFDLVTLKATFSRSTSHFRVVE*
Ga0062589_1002501192	3300004156	Soil	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQA
Ga0063356_1000248744	3300004463	Arabidopsis Thaliana Rhizosphere	MKPSPIEDAVASVSLIWVDATGKERPVKGVIGRPYQIDERHWSCPHHLEGASDKGPDIAGADSIQALSLALYGLYHDLLRLLEEGGRLLDPQTRTPFDLVTLKATFSRSTSQFQIVT*
Ga0068996_101817351	3300005218	Natural And Restored Wetlands	CVPQMKRTQIQEPVASVAFIWVDGKGTERSVTGVIGKPYQVGDSYWSCPYVLEGALEQGHDVGGGDSVQALSLALYGLYHNLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0070683_10000776511	3300005329	Corn Rhizosphere	MKRTPIKEQIASVSFIWVDARGAEHSVTGVVGKPVSVGDDRWACPYVLEGALDQSEEITGSDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS*
Ga0070683_1002334062	3300005329	Corn Rhizosphere	MKGTSIQEPVASVSFNWIDAKGTERPLTGIIGKPYQVAAGEWACPYLLQGALDQGPDIVGGDSIQALSLALYGLYHDLIRLLGEGGRLLDPKTRQPSDLVTLKATFSRSTSQFNVVP*
Ga0070683_1008474472	3300005329	Corn Rhizosphere	RGGEHPVRGIVGKPYALADADDRWSCPYVLEGALEQAQEIAGGDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSTFQAVT*
Ga0070690_1000049103	3300005330	Switchgrass Rhizosphere	MSRTTIQEPIASVAFIWVNATGAQLPVTGVVGKPYRVGDDQWACAYSIDGAVEQGPDIVGFDSIQALSLALYGLYHDLIRLLDDGGRLLNPRTREPFDLVTLKATFSRSTSQFNIVP*
Ga0070690_1005772312	3300005330	Switchgrass Rhizosphere	MKRTQIQEPVASVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRST
Ga0070670_1001455153	3300005331	Switchgrass Rhizosphere	MNQGEIKEPVASVSFIWVDPQGGEHPVTGMVGKPYQVRDDGWACAYLLEGAFDQGPDISGADSIQVLSLALYGLYHDLIRLLDTGGRLLHPQTREPFDLVTLKATFSRSTSQFRAVE*
Ga0070682_1007028001	3300005337	Corn Rhizosphere	MSRTTIQEPIASVAFIWVNATGAQLPVTGVVGKPYRVGDDQWACAYSIDGAVEQSPDIVGFDSIQALSLALYGLYHDLIRLLDDGGRLLNPRTREPFDLVTLKATFSRSTSQFNIVP*
Ga0070682_1014861571	3300005337	Corn Rhizosphere	MKRTPIKEQVASVSFIWVDARGAEHSVMGIIGKPVSVGDDQWSCPYVLEGALEQGQEITGSDSIQALSLALYGLYHDLLRLLGEGGRLLNPKTREPF
Ga0068868_1009517891	3300005338	Miscanthus Rhizosphere	MKRTPIKEQIASVSFIWVDARGAEHSVTGVVGKPVSVGDDRWACPYVLEGALDQSEEITGSDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDL
Ga0070689_1014567591	3300005340	Switchgrass Rhizosphere	TIKEPVASVSFNWVDAKGTERPVQGIVGKPYQLSDQEWACPYVLDGAFEQGPDIPGVDSVQALSLALYGLYHDLIRLLDEGGRLLNPKTRETFDLVTLKATFSRSTSQFNVVT*
Ga0070669_1015217461	3300005353	Switchgrass Rhizosphere	RYCVPQMKRTQIQEPVASVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0070675_1015301792	3300005354	Miscanthus Rhizosphere	ASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0070671_1016245091	3300005355	Switchgrass Rhizosphere	MKRPEIAEPIASVSFIWVDARGGEHPVRGIVGKPYALADADDRWSCRYVLEGALEQEQEIAGGDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSTFQVVT*
Ga0070671_1020578601	3300005355	Switchgrass Rhizosphere	MSRTTIQEPIASVAFIWVNATGAQLPVTGVVGKPYRVGDDQWACAYSIDGAVEQGPDIVGFDSIQALSLALYGLYHDLIRLLDDGGRLLNPRTREPFDLVT
Ga0070673_1024116871	3300005364	Switchgrass Rhizosphere	MKRTPIKEQVASVSFIWVDARGAEHSVMGIIGKPVSVGDDQWSCPYVLEGALEQGQEITGSDSIQALSLALYGLYHDLLRLLGEGGRLLNPKTREPFDLVTLKATFSR
Ga0070688_1002081412	3300005365	Switchgrass Rhizosphere	MSRTTIQEPIASVAFIWVNATGAQLPVTGVVGKPYRVGDDQWACAYSIDGAVEQGPDIVGFDSIQALSLALYGLYHDLIRLLDDGGRLLNPRTREPFDLVTLKATFSRS
Ga0070688_1002646052	3300005365	Switchgrass Rhizosphere	MNQGEIKEPVASVSFIWVDPQGGEHPVTGMVGKPYQVRDDGWACAYLLEGAFDQGPDISGADSIQVLSLALYGLYHDLIRLLDTGGRLLHPQTREPFDLVTLKATFSRSTSQFQALA*
Ga0070667_1004578192	3300005367	Switchgrass Rhizosphere	MKRTPIKEQVASVSFIWVDARGAEHSVMGIIGKPVSVGDDQWSCPYVLEGALEQGQEITGSDSIQALSLALYGLYHDLLRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS*
Ga0070705_1000417291	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0070681_100542913	3300005458	Corn Rhizosphere	MKGTSIQEPVASVSFNWIDAKGTERPLTGIIGKPYQVAAGGWACPYLLQGAFDQGPDIVGGDSIQALSLALYGLYHDLIRLLGEGGRLLDPKTRQPSDLVTLKATFSRSTSQFNVVP*
Ga0070685_108855071	3300005466	Switchgrass Rhizosphere	MTQSQIQEPIASVSFIWVDAKGAERPVTGIVGKPYQKSTEEWACPYVVEGASFDQGPDIASGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQALA*
Ga0070693_1008636121	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKRTQIQEPVASVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQLQAVS*
Ga0068857_1017589532	3300005577	Corn Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTDRPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0068859_1006542421	3300005617	Switchgrass Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTS
Ga0068864_1014313891	3300005618	Switchgrass Rhizosphere	MKGTTIKEPVASVSFNWVDAKGTERPVQGIVGKPYQLSDQEWACPYVLDGAFEQGPDIPGGDSVQALSLALYGLYHDVIRLLDEGGRLLNPKTRETFDLVTLKATFSRSTSQFNVVT*
Ga0074470_102457182	3300005836	Sediment (Intertidal)	MERTPIKEQVASVSFIWVDAKGAERSVTGIVGRPLPVGDDRWSCSYVLKGALDQGEDIVGGDSIQALSLALYGLYHDLIGLLANGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVG*
Ga0068860_1023355291	3300005843	Switchgrass Rhizosphere	ILRRCRRAIQRYCVPQMKRTQIQEPVASVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0097621_1008580542	3300006237	Miscanthus Rhizosphere	MERTPIKEQVASVSFIWVDAKGTEHSVTGIVGKPHPVGGDRWSCSYVLEGALEQGEDIVGGDSIQALSLALYGLYHDLIGLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVT*
Ga0097621_1013026512	3300006237	Miscanthus Rhizosphere	MKGTTIKEPVASVSFNWVDAKGTERPVQGIVGKPYQLSDQEWACPYVLDGAFEQGPDIPGVDSVQALSLALYGLYHDLIRLLDEGGRLLNPKTRETFDLVTLKATFSRSTSQFNVVT*
Ga0097621_1018686532	3300006237	Miscanthus Rhizosphere	MKRPEIAEPIASVSFIWVDARGGEHPVRGIVGKPYALADADDRWSCRYVLEGALEQEQEIAGGDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKA
Ga0068871_1015424561	3300006358	Miscanthus Rhizosphere	MERTPIKEQVASVSFIWVDAKGAEHSVTGIVGKPHPVGGDRWSCSYVLEGALEQGEDIVGGDSIQALSLALYGLYHDLIGLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVT*
Ga0075428_1009517112	3300006844	Populus Rhizosphere	MTQSQIQEPIASVSFIWVDAKGAERAVTGIVGKPYQKSTDEWACPYVVEGASFDQGPDIASGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQAMA*
Ga0075425_1007655142	3300006854	Populus Rhizosphere	MTRTSIKEPIANVSFIWIDAEGAQLPVQAVVGKPYQVGEDRWACPYVLEGAFEQGPDIVGVDSIQALSLALYGLYHDLIRLLSDGGRLLHPRTREPFDLVTLKATFSRSTAQFQSVT*
Ga0111539_116611791	3300009094	Populus Rhizosphere	SLIWVDATGKERPVKGVIGRPYQIDERHWSCPHHLEGASDKGPDIAGADSIQALSLALYGLYHDLLRLLEEGGRLLDPQTRTPFDLVTLKATFSRSTSQFQIVT*
Ga0111539_128432481	3300009094	Populus Rhizosphere	MVSGRMTQSQIQEPIASVSFIWVDAKGAERAITGIVGKPYQKSTDEWACPYVVEGASFDQGPDIASGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQAMA*
Ga0066709_1022151221	3300009137	Grasslands Soil	EPVASVSFIWVDPAGVEHPVKGVVGKPYQVGEDEWACTYALEGATEQGPAIPGVDSIQALSLALYGLYHDLIGLLDHGGRLLHPKTRQPFDLVTLKATFSRSTSQFRVVD*
Ga0111538_111199723	3300009156	Populus Rhizosphere	WVDATGKERPVKGVIGRPYQIDERHWSCPHHLEGASDKGPDIAGADSIQALSLALYGLYHDLLRLLEEGGRLLDPQTRTPFDLVTLKATFSRSTSQFQIVT*
Ga0111538_136403031	3300009156	Populus Rhizosphere	MTQSQIQEPIASVSFIWVDAKGAERAITGIVGKPYQKSTDEWACPYVVEGASFDQGPDIASGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQALA*
Ga0105252_103463841	3300009678	Soil	MTHSQIQEPIATVSFIWVDAKGTEHPVTGIVGKPYQKGAEEWACPYVVEGAFDQGSDISSGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQALA*
Ga0126377_131126751	3300010362	Tropical Forest Soil	MNRTSIKEPVATVSFIWTDAKGAEAAVTGIVGKPYQVNDEEWACPYVLEGAYEQGPDIPGADSIQALSLALYGLYHDLIRLLDDGGRLLNPKNREPFDLVTLKATFSRSTSQFSIVP*
Ga0134124_118233461	3300010397	Terrestrial Soil	MSRTTNQEPIASVAFIWVNATGAQLPVTGVVGKPYRVGDDQWACAYSIDGAVEQGPDIVGFDSIQALSLALYGLYHDLIRLLDDGGRLLNPRTREPFDLVTLKATFSRSTSQFNIVP*
Ga0134122_118543892	3300010400	Terrestrial Soil	MSRTTIQEPIASVAFIWVNATGAQLPVTGVVGKPYRVGDDQWACAYSIDGAVEQGPDIVGFDSIQALSLALYGLYHDLIRLLDDGGRLLNPRTREPFDLVTL
Ga0134123_103796472	3300010403	Terrestrial Soil	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLARYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0137326_10595371	3300011417	Soil	TVSFIWVDAKGAERPVTGIVGKPYQKGAEEWACPYVVEGASFDQGPDISSSDSIQALSLALYGLYHDLIRLLSDGGRLLNPKTREKFDLVTLKATFSRSTSQFQALA*
Ga0137425_11979681	3300011422	Soil	MTQSQIQEPIATVSFIWVDAKGAERPVTGIVGKPYQKGAEEWACPYVVEGASFDQGPDISSSDSIQALSLALYGLYHDLIRLLSDGGRLLNPKTREKFDLVTLKATFSRSTSQFQALA*
Ga0137464_11156642	3300011434	Soil	MTRSQIQEPIASVSFIWVDAKGAEQQVTGIVGKPYQKGADQWSCPYMLEGAFEQGPDISSGDSIQALSLALYGLYHDLIRLLSDGGRLLNPRTRETFDLVTLKATFSRSTSQFQALA*
Ga0137429_12483592	3300011437	Soil	MTQSQIQEPIATVSFIWVDAKGAERPVTGIVGKPYQKGTEEWACPYVVEGAFDQGPDISSGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTREEFDLVTLKATFSRSTSQFQALA*
Ga0137451_10292793	3300011438	Soil	MMPASIKDLVASVSFLWIDAKGTEISVTGIVGKPQQVGDDEWTCAYLLEGAREQGTEIAGADSIQALSLALYGLYHDLIGLLDDGGQLLHPKTRQPFDLVTLKATFSRSTSQFRAVI*
Ga0137452_12355511	3300011441	Soil	MTRSQIQEPIASVSFIWVDAKGAEQQVTGIVGKPYQKGADQWSCPYMLEGAFEQGPDISSGDSIQALSLALYGLYHDLIRLLSDGGRLLNPRTRETFD
Ga0137427_100829882	3300011445	Soil	MTHSQIQEPIATVSFIWVDAKGTEHPVTGIVGKPYQKGAEEWACPYVVEGAFDQGPDISSGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQALA*
Ga0137321_11423072	3300012175	Soil	SQIQEPIATVSFIWVDAKGAERPVTGIVGKPYQKGAEEWACPYVVEGASFDQGPDISSSDSIQALSLALYGLYHDLIRLLSDGGRLLNPKTREKFDLVTLKATFSRSTSQFQALA*
Ga0150985_1080347542	3300012212	Avena Fatua Rhizosphere	MEQTPIKEQIASVALIWVDTKGREHSVNGIVGKPYPIADDHWSCAYVLDGALERGEEITGKDSIQALSLALYGLYHDLIGLLRDGGRLLNPKTREPFDLVTLKATFSRSTSQFQAIG*
Ga0137465_11090182	3300012231	Soil	VSFIWVDAKGAEKRVTGIVGKPYEQGADDWACPYVVEGAFDQGPDISSGDSIQALSLALYGLYHDLIRLLSDGGRLLNPRTRETFDLVTLKATFSRSTSQFQALA*
Ga0137435_11995911	3300012232	Soil	MVSVQMSRTSIKEPIASVSFIWVDASGAQLPVKGVVGKPYQVGHEWACPYVLEGAFEQGPDIVGVDSIQALSLALYGLYHDLIRLLSDGGRLLDPRTREPFDLVTLKATFSRSTSQFQTVT*
Ga0137367_101861532	3300012353	Vadose Zone Soil	MERTPIKEQIASVPFIWIDPKGREHSVTGIVGKPYPIGDDHWACAYVLDGALEQGEEIAGSDSIQALSLALYGLYHDLIGLLRDGGRLLNPKTREPFDLVTLKATFSRSTSQFQAIG*
Ga0137366_105802902	3300012354	Vadose Zone Soil	VDAKGSEHSVTGIVGKPAPIGNDQWACSYALEGALEQSEEIVGGDSIQALSLALYGLYHDLIGLLRDGGRLLNPKTREPFDLVTLKATFSRSTSQFQAIG*
Ga0150984_1144418002	3300012469	Avena Fatua Rhizosphere	MERTPIKEQIASVSFIWVDPKGREHSVTGIVGKPYPIGDDQWSCGYVLDGALEQGEEITGSDSIQALSLALYGLYHDLLGLLRDGGRLLHPKTRDPFDLVTLKATFSRSTSQFQAIG*
Ga0157302_104480202	3300012915	Soil	VDARGAEHSVTGVVGKPVSVGDDRWACPYVLEGALDQSEEITGSDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS*
Ga0164301_117106931	3300012960	Soil	EPIASVSFIWVDARGGEHPVRGIVGKPYALADADDRWSCRYVLEGALEQEQEIAGGDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLITLKATFSRSTSTFQVVT*
Ga0164302_115351761	3300012961	Soil	KDPIASVSFIWVDAKGREHSVTGIVGKPFPIADDHWACTYVLEGALDQGEEIVGGDSMQALSLALYGLYHDLIGLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVT*
Ga0164309_113437202	3300012984	Soil	MKRPEIAEPIASVSFIWVDARGGEHPVRGIVGKPYALADADDRWSCRYVLEGALEQEQEIAGGDSIQALSLALYGLYHDLIRLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVG*
Ga0164304_110094882	3300012986	Soil	WVDARGGEHPVRGIVGKPYALADADDRWSCRYVLEGALEQEQEIAGGDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSTFQVVT*
Ga0157374_104316442	3300013296	Miscanthus Rhizosphere	MKRTPIKEQIASVAFIWVDARGAEHSVTGVVGKPVSVGDDRWACPYVLEGALDQSEEITGSDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS*
Ga0157374_121910411	3300013296	Miscanthus Rhizosphere	MERTPIKEQIASVSFIWVDGKGGEHSVNGIVGKPYPLGDDHWSCAYVLDGALEQGEEITGKDSIQALSLALYGLYHDLIGLLRDGGRLLNPKTREPF
Ga0075351_10878962	3300014318	Natural And Restored Wetlands	VFVDNFDNGRHLKQGYCPRQMKQAPIKEPVASVSFIWVDANVKQLPVKGLIGKPHQVGDAWACPYVLEGAFEQGPDIVGVDSVQALSLALYGLYHDLIRLLSDGGRLLNPRTREPFDLVTLKATFSRSTSQFQTVS*
Ga0163163_113831332	3300014325	Switchgrass Rhizosphere	MKRTQIQEPVASVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFD
Ga0157377_102094422	3300014745	Miscanthus Rhizosphere	MTQSQIQEPIASVSFIWVDAKGAERPVTGIVGKPYQKSTEEWACPYVVEGASFDQGPDIASGDSIQALSLALYGLYHDLIRLLSDGGRLLNPRTREKFDLVTLKATFSRSTSQFQALA*
Ga0157379_114220681	3300014968	Switchgrass Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSR
Ga0157376_127445731	3300014969	Miscanthus Rhizosphere	MERTPIKEQVASVSFIWVDAKGTEHSVTGIVGKPHPVGGDRWSCSYVLEGALEQGEDIVGGDSIQALSLALYGLYHDLIGLLANGGRLLNPKTREPFDLVTLKATFSRSTSRFQAVT
Ga0132258_110592642	3300015371	Arabidopsis Rhizosphere	MSRTTIQEPIASVAFLWVNGTGAQVPVKGVVGKPYRVGDDQWACAYALDGALEQGPDIVGFDSIQALSLALYGLYHDLIRLLDEGGRLLNPRTREPFDLVTLKATFSRSTSQFNIVP*
Ga0132258_128002552	3300015371	Arabidopsis Rhizosphere	MKRTQIQDPVASVAFIWVDGNGTERSVRGIIGKPYEVGDNHWSCPYVLEGTLEQGQDVDGSDSVQALSLALYGLYHDLIRMMGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0132258_135996562	3300015371	Arabidopsis Rhizosphere	MKRTTIQDPVASVSFIWVDAKGAEHAVRGMIGKPYQSGQGNHEQWSCAHVLEGAFEQRPDITGGDSVQVLSLALYGLYHDLLRLLDEGGRLLNPKTREPFDLVTLKATFSRTTSQFSAVA
Ga0132256_1027518242	3300015372	Arabidopsis Rhizosphere	WVNGTGAQVRVKGVVGKPYRVGDDQWACAYALDGALEQGPDIVGFDSIQALSLALYGLYHDLIRLLDEGGRLLNPRTREPFDLVTLKATFSRSTSQFNIVP*
Ga0132255_1000146389	3300015374	Arabidopsis Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGTLEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPITRQPFDLVTLKAMFSRSTSQFQAVS*
Ga0132255_1010732953	3300015374	Arabidopsis Rhizosphere	MTQSQIQEPIASVSFIWVDAKGAEGPVKGIIGKPYQIDERHWTCPYQLEGAFEKGPDVAGADSIQALSLALYGLYHDLLRLLGDGGRLLDPRTRTPFDLVTLKATFSRSTSQFQVVE*
Ga0132255_1020181392	3300015374	Arabidopsis Rhizosphere	MKRTQIQDPVASVAFIWVDGNGTERSVRGIIGKPYEVGDNHWSCPYVLEGTLEQGQDVDGSDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS*
Ga0184628_100628802	3300018083	Groundwater Sediment	MMPASIKEPVASVSFIWIDAKGTEVSVTGIVGKPQQVGDDEWTCAYLLEGALEHGTEIAGVDSIQALSLALYGLYHDLIGLLDDGGQLLHPKTRQPFDLVTLKATFSRSTSQFRAVT
Ga0173482_100551372	3300019361	Soil	MKRTQIQEPVASVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS
Ga0173479_107454411	3300019362	Soil	SVAFIWVDGKGTERSVTGIVGKPYQVGDSHWSCPYVLEGTLEQAQDVGGGDSVQALSLALYGLYHDLIRMLGDGGRLLDPKTRQPFDLVTLKATFSRSTSQFQAVS
Ga0193692_10231892	3300020000	Soil	MERTKIKDQIASVSFIWVDAKGLEHSVTGIVGKPFPIADDQWACTYVLEGALDQGEEIVGGDSMQALSLALYGLYHDLIGLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVG
Ga0222622_101161942	3300022756	Groundwater Sediment	MERTEIKDPIASVSFIWVDAKGREHSVTGIVGKPFPIADDHWACTYVLEGALDQGEEIVGGDSMQALSLALYGLYHDLIRLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVG
Ga0222622_106075472	3300022756	Groundwater Sediment	MTQSQIQEPIASVSFIWVDAKGAERPITGIVGKPYQKGEQEWACPYIVEGASFDQGPDIASSDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQAMA
Ga0247672_10045343	3300024187	Soil	MKRAQIDEAVASVAYVWIDASGAERPLKGIVGKPYPVGDQWSCPYVLEGGLEQGQDVAGGDSVQALSLALYGLYHDLLRLLGDGGRLLNPTTREPFDLVTLKATFSRSTSQFQSVS
Ga0207666_10078912	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS
Ga0207697_101874982	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	RARRRRAEVQQFFEDCRCAIQRYGVKQMKRTPIKEQVASVSFIWVDARGAEHSVMGIIGKPVSVGDDQWSCPYVLEGALEQGQEITGSDSIQALSLALYGLYHDLLRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS
Ga0207682_102659402	3300025893	Miscanthus Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALNLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS
Ga0207642_100549371	3300025899	Miscanthus Rhizosphere	KEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS
Ga0207707_100536374	3300025912	Corn Rhizosphere	MKGTSIQEPVASVSFNWIDAKGTERPLTGIIGKPYQVAAGGWACPYLLQGAFDQGPDIVGGDSIQALSLALYGLYHDLIRLLGEGGRLLDPKTRQPSDLVTLKATFSRSTSQFNVVP
Ga0207662_100470852	3300025918	Switchgrass Rhizosphere	MSRTTIQEPIASVAFIWVNATGAQLPVTGVVGKPYRVGDDQWACAYSIDGAVEQGPDIVGFDSIQALSLALYGLYHDLIRLLDDGGRLLNPRTREPFDLVTLKATFSRSTSQFNIVP
Ga0207701_100106858	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKRTPIKEQVASVSFIWVDARGAEHSVMGIIGKPVSVGDDQWSCPYVLEGALEQGQEITGSDSIQALSLALYGLYHDLLRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS
Ga0207644_102817662	3300025931	Switchgrass Rhizosphere	VTPMERTPIKEQIASVSFIWVDGKGGEHSVNVIVGKPYPLGDDHWSCAYVLDGALEQGEEITGKDSIQALSLALYGLYHDLIGLLRDGGRLLNPKTREPFDLVTLKATFSRSTSQFQAIG
Ga0207691_109591681	3300025940	Miscanthus Rhizosphere	IQEPIASVSFIWVDAKGAERPVTGIVGKPYQKSTEEWACPYVVEGASFDQGPDIASGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQALA
Ga0207661_100304425	3300025944	Corn Rhizosphere	MKRTPIKEQIASVSFIWVDARGAEHSVTGVVGKPVSVGDDRWACPYVLEGALDQSEEITGSDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS
Ga0207651_116339362	3300025960	Switchgrass Rhizosphere	KRTPIKEQVASVSFIWVDARGAEHSVMGIIGKPVSVGDDQWSCPYVLEGALEQGQEITGSDSIQALSLALYGLYHDLLRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVS
Ga0207676_104130061	3300026095	Switchgrass Rhizosphere	MKRTPIKEQIASVSFIWVDARGAEHSVTGVVGKPVSVGDDRWACPYVLEGALDQSEEITGSDSIQALSLALYGLYHDLIRLLGEGGRLLNPKTREPFDLVTLKATFSRSTSQ
Ga0207683_101917451	3300026121	Miscanthus Rhizosphere	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVT
Ga0207428_100418832	3300027907	Populus Rhizosphere	MTQSQIQEPIASVSFIWVDAKGAERAVTGIVGKPYQKSTDEWACPYVVEGASFDQGPDIASGDSIQALSLALYGLYHDLIRLLGDGGRLLNPKTRETFDLVTLKATFSRSTSQFQAMA
Ga0307280_100012802	3300028768	Soil	MERTEIKDPIASVSFIWVDAKGGEHPVTGIVGKPFPIADDRWACTYVLEGAPDGGDEIVGGDSIQALSLALYGLYHDLIRLLGNGGRLLNPKTREPFDLVTLKATFSRSTSQFQAVG
Ga0310888_101314032	3300031538	Soil	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGTLEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPNTRQPFDLVTLKATFSRSTSQFQAVS
Ga0310900_101122092	3300031908	Soil	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGTLEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPITRQPFDLVTLKATFSRSTSQFQAVS
Ga0310891_101156262	3300031913	Soil	MRRTEIKEIVASVAFIWVDGKGTERPVTGIIGKPYQVGGSHWSCPYVLEGALEQGQDVGGGDSIQALSLALYGLYHDLLRMLGDGGRLLDPITRQPFDLVTLKATFSRSTSQFQAVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F089077

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences