Metagenome / Metatranscriptome Family F089062

Basic Information
Family ID	F089062
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	60 residues
Representative Sequence	MSWETIRNLVRDEWLILSLLLAWSLAGLAVICERFYALWNVIPKSEAFKNRVIDALE
Number of Associated Samples	97
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.44 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	87.16 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (89.908 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (9.174 % of family members)
Environment Ontology (ENVO)	Unclassified (21.101 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.697 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.53% β-sheet: 0.00% Coil/Unstructured: 36.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02518	HATPase_c	8.26
PF00672	HAMP	3.67
PF13180	PDZ_2	0.92
PF02504	FA_synthesis	0.92
PF03109	ABC1	0.92
PF13491	FtsK_4TM	0.92
PF01618	MotA_ExbB	0.92
PF07586	HXXSHH	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0416	Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)	Lipid transport and metabolism [I]	0.92
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.83 %
Unclassified	root	N/A	9.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.83 %
Unclassified	root	N/A	9.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.91 %
Unclassified	root	N/A	9.17 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.16 %
Unclassified	root	N/A	9.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.92 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	86.24 %
Unclassified	root	N/A	9.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	0.92 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	86.24 %
Unclassified	root	N/A	9.17 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.92 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	73.39 %
Unclassified	root	N/A	9.17 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6.42 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.92 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	73.39 %
Unclassified	root	N/A	9.17 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	5.50 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.92 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	73.39 %
Unclassified	root	N/A	9.17 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	5.50 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.92 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	73.39 %
Unclassified	root	N/A	9.17 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	5.50 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.92 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	73.39 %
Unclassified	root	N/A	9.17 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	5.50 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.92 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_109347324	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300003991\|Ga0055461_10157256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300004015\|Ga0055462_10282842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300004062\|Ga0055500_10105313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300005328\|Ga0070676_10108357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1726	Open in IMG/M
3300005343\|Ga0070687_100817464	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300005458\|Ga0070681_11373066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300005471\|Ga0070698_101812640	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300005518\|Ga0070699_101974890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300005547\|Ga0070693_100364040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	993	Open in IMG/M
3300005614\|Ga0068856_102591901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300005616\|Ga0068852_101420984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300005616\|Ga0068852_102757093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300005834\|Ga0068851_10645827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300005836\|Ga0074470_11560170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1010	Open in IMG/M
3300005841\|Ga0068863_100751323	Not Available	971	Open in IMG/M
3300005844\|Ga0068862_100174487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1926	Open in IMG/M
3300006237\|Ga0097621_101916433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300006845\|Ga0075421_101955146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	626	Open in IMG/M
3300009094\|Ga0111539_11930657	Not Available	685	Open in IMG/M
3300009098\|Ga0105245_12288934	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300009100\|Ga0075418_12824119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300009147\|Ga0114129_13384209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300009156\|Ga0111538_12770072	Not Available	614	Open in IMG/M
3300009156\|Ga0111538_13434871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300009177\|Ga0105248_12920621	Not Available	545	Open in IMG/M
3300012041\|Ga0137430_1004674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	3471	Open in IMG/M
3300012046\|Ga0136634_10386806	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012469\|Ga0150984_100485582	Not Available	543	Open in IMG/M
3300012532\|Ga0137373_10560559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	866	Open in IMG/M
3300013296\|Ga0157374_12093971	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300013832\|Ga0120132_1117529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300014325\|Ga0163163_11787754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	675	Open in IMG/M
3300014496\|Ga0182011_10380985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	923	Open in IMG/M
3300014498\|Ga0182019_10013622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	4329	Open in IMG/M
3300014502\|Ga0182021_10087579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3615	Open in IMG/M
3300014502\|Ga0182021_11533610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300014502\|Ga0182021_13349824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300014839\|Ga0182027_10776413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1005	Open in IMG/M
3300014839\|Ga0182027_11886477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300015360\|Ga0163144_10233800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2474	Open in IMG/M
3300015373\|Ga0132257_102529689	Not Available	667	Open in IMG/M
3300018020\|Ga0187861_10090974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1488	Open in IMG/M
3300018025\|Ga0187885_10016354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4440	Open in IMG/M
3300018469\|Ga0190270_12674035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300018481\|Ga0190271_10014929	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	5743	Open in IMG/M
3300019788\|Ga0182028_1273942	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300019788\|Ga0182028_1400555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	979	Open in IMG/M
3300022516\|Ga0224542_1041787	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300022554\|Ga0212093_1230885	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300022756\|Ga0222622_10056635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2240	Open in IMG/M
3300023077\|Ga0247802_1028668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300023311\|Ga0256681_10730338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300025573\|Ga0210133_1122640	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	577	Open in IMG/M
3300025878\|Ga0209584_10366325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300025912\|Ga0207707_11309664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300025915\|Ga0207693_11029856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300025925\|Ga0207650_10271230	Not Available	1379	Open in IMG/M
3300025925\|Ga0207650_11113555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300025927\|Ga0207687_11562467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300025939\|Ga0207665_10961950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	678	Open in IMG/M
3300025944\|Ga0207661_12076017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300025960\|Ga0207651_11057753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300026121\|Ga0207683_10172391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1960	Open in IMG/M
3300026381\|Ga0255357_1000611	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	5813	Open in IMG/M
3300027884\|Ga0209275_10377042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	798	Open in IMG/M
3300028069\|Ga0255358_1070435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300028556\|Ga0265337_1080241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	893	Open in IMG/M
3300028558\|Ga0265326_10242818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300028653\|Ga0265323_10173079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300028736\|Ga0302214_1104769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300028856\|Ga0302295_1135644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	561	Open in IMG/M
3300029889\|Ga0246001_1083258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300030002\|Ga0311350_10274051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1505	Open in IMG/M
3300030002\|Ga0311350_11357418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	632	Open in IMG/M
3300030002\|Ga0311350_12019477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300030114\|Ga0311333_10596161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	914	Open in IMG/M
3300030294\|Ga0311349_11037537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300030339\|Ga0311360_10972368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	671	Open in IMG/M
3300030905\|Ga0308200_1115519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300030905\|Ga0308200_1130511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300031093\|Ga0308197_10395520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300031232\|Ga0302323_101096711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	887	Open in IMG/M
3300031235\|Ga0265330_10011071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	4234	Open in IMG/M
3300031249\|Ga0265339_10042374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2520	Open in IMG/M
3300031344\|Ga0265316_10097908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2232	Open in IMG/M
3300031562\|Ga0310886_10309182	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	906	Open in IMG/M
3300031572\|Ga0318515_10367733	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300031595\|Ga0265313_10011925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5364	Open in IMG/M
3300031744\|Ga0306918_11221267	Not Available	580	Open in IMG/M
3300031747\|Ga0318502_10758449	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300031751\|Ga0318494_10014408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	3812	Open in IMG/M
3300031890\|Ga0306925_10638295	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1121	Open in IMG/M
3300031894\|Ga0318522_10271876	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300031902\|Ga0302322_100663899	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1232	Open in IMG/M
3300031902\|Ga0302322_103884283	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300031910\|Ga0306923_10604486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300032010\|Ga0318569_10535411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300032017\|Ga0310899_10553159	Not Available	571	Open in IMG/M
3300032139\|Ga0316580_10282463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300032955\|Ga0335076_10301116	Not Available	1492	Open in IMG/M
3300032955\|Ga0335076_11314502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	608	Open in IMG/M
3300033407\|Ga0214472_10359604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1374	Open in IMG/M
3300033413\|Ga0316603_11695122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300033797\|Ga0334815_054535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300033798\|Ga0334821_100675	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300034128\|Ga0370490_0102114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	938	Open in IMG/M
3300034130\|Ga0370494_007810	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2816	Open in IMG/M
3300034257\|Ga0370495_0339980	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.72%
Host-Associated	Host-Associated	30.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.80%
Plants	Host-Associated → Plants	30.28%
Aquatic	Environmental → Aquatic	11.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.10%
Peat	Environmental → Terrestrial → Peat	15.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.34%
Freshwater	Environmental → Aquatic → Freshwater	4.59%
Marine	Environmental → Aquatic → Marine	3.67%
Sediment	Environmental → Aquatic → Sediment	2.75%
Roots	Host-Associated → Plants → Roots	1.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.09%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.50%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Lake	Environmental → Aquatic → Freshwater → Lake	1.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.83%
Ice	Environmental → Aquatic → Freshwater → Ice	0.92%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.09%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	9.17%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	8.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	6.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.75%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.92%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.92%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003991	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300012041	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022516	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 30-34	Environmental	Open in IMG/M
3300022554	Dewar_combined assembly	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025573	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026381	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T-25	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032139	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB	Host-Associated	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033797	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-S	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089062

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1093473241	3300000955	Soil	FQIMSWETIKDLVRDEWLILSLLLFWSLVGLTIICERAYALWNVLPKSEAFKNK
Ga0055461_101572562	3300003991	Natural And Restored Wetlands	MTWETIRNLIHDEWVILSLLLLWSVAGVAVICERIYALWGVLPKSETFKNRVIEAVE
Ga0055462_102828422	3300004015	Natural And Restored Wetlands	MSWETISNLIHDEWMILSLLLLWSIAGVTIICERVYSLWNVLGKSEVFKTRVIEAVEAGDLPKANALCET
Ga0055500_101053131	3300004062	Natural And Restored Wetlands	MRNLVRDEWLILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGDVAKATAL
Ga0070676_101083571	3300005328	Miscanthus Rhizosphere	MSWEMMRNLVRDEWVILSLLVAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERG
Ga0070687_1008174641	3300005343	Switchgrass Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGDVAKA
Ga0070681_113730662	3300005458	Corn Rhizosphere	MSWEMMRNLVRDEWLILSLLLAWSLAGLAVICERLYALWNVIPKSEAFKNRVIDALE
Ga0070698_1018126402	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTWETIRNLVRDEWVILSLLFVWSLAGLTVICERVYALWNVLGKSEAFKIKVIAALESGDLAKAS
Ga0070699_1019748901	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTWETILDLVRKEWFILSLLLLWSLAGLTIICERVYSLWNVLPKSEAFKTRVVQALESGDVSKANALCET
Ga0070693_1003640402	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSWETIRNLVRDEWLILSLLLAWSLAGLAVICERFYALWNLIPKSEAFKD
Ga0068856_1025919011	3300005614	Corn Rhizosphere	MTWETIRNLVRDEWVILSLLLLWSLAGLTVICERVYSLWNVIPKSMAFKNKVIAALEGGDLAKASAL
Ga0068852_1014209841	3300005616	Corn Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALER
Ga0068852_1027570931	3300005616	Corn Rhizosphere	MTWETIRNLVRDEWVILSLLLLWSLAGLTVICERVYSLWNVIPKSTAFKNKVIAALE
Ga0068851_106458272	3300005834	Corn Rhizosphere	MTWETIRNLVRDEWLILSLLLFWSLAGLSVICERVYSLWNVLPKSEAFKNKVLAALEGGDLAKAT
Ga0074470_115601702	3300005836	Sediment (Intertidal)	MSWETIRNLLHDEWAILLLLLVWSVAGVAVICERIYSLWGVLAKSEGFKVRVIEAVE
Ga0068863_1007513232	3300005841	Switchgrass Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLIPKSEAFKNRVIDALDKGDIAKATALCEM
Ga0068862_1001744872	3300005844	Switchgrass Rhizosphere	MTWETIRNLVRDEWVILSLLLLWSLAGLTVICERIYSLWNIVGKSEAFKTKVLAALDGGD
Ga0097621_1019164332	3300006237	Miscanthus Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALDKGDIAKATA
Ga0075421_1019551462	3300006845	Populus Rhizosphere	MTWETILDLVRKEWFILSLLLLWSLAGLTIICERIYSLWNVLPKSEAFKTRVVQALESGD
Ga0111539_119306572	3300009094	Populus Rhizosphere	MSWEMMRNLIRDEWLILSLLLAWSLAGLAVICERLYALWNLIPKSEAFKNRVVDALERGDLAKA
Ga0105245_122889342	3300009098	Miscanthus Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALE
Ga0075418_128241192	3300009100	Populus Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGDVAKATA
Ga0114129_133842091	3300009147	Populus Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNVVPKSEAFKNRVIDA
Ga0111538_127700721	3300009156	Populus Rhizosphere	MSWEMMRNLIRDEWLILSLLLAWSLAGLAVICERLYALWNLLPKSEAFKNRVVDALERGDVAKAAAM
Ga0111538_134348712	3300009156	Populus Rhizosphere	MSWETIRGLVRDEWLILSLLLLWSLVGLTIICERVYALWNAIPKAEAFKN
Ga0105248_129206212	3300009177	Switchgrass Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLIPKSEAFKNRVI
Ga0137430_10046743	3300012041	Soil	MRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGD
Ga0136634_103868062	3300012046	Polar Desert Sand	MTWELILDLIRKEWLILSMLLAWSLAGLTIICERIYSLWNVLPRSEAFKNKVIAALEGGDLSK
Ga0150984_1004855822	3300012469	Avena Fatua Rhizosphere	MTWETILDLVRKEWLILSLLLFWSLAGLTIIRERVYSLWNVLPKSEAFKNRVVGAIESGDISKAT
Ga0137373_105605592	3300012532	Vadose Zone Soil	MSWETIRNLLRDEWAILLLLLAWSVAGLSVICERIYSLWGVLPKSEAFKNRVIEAIEK
Ga0157374_120939712	3300013296	Miscanthus Rhizosphere	MSWEMMRNLGRDEGLILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGDIAKATALCE
Ga0120132_11175291	3300013832	Permafrost	MSWETIRNLVRDEWLILSLLLAWSLAGLAVICERFYALWNVIPKSEAFKNRVIDALE
Ga0163163_117877541	3300014325	Switchgrass Rhizosphere	MSWEMMRNLIRDEWLILSLLLAWSLAGLAVICERLYALWNLIPKSEAFKNRVIDALER
Ga0182011_103809852	3300014496	Fen	MSWETIRNLIHDEWAILLLLLAWSVAGLSVICERIYSLWRVLPKSEAFKN
Ga0182019_100136223	3300014498	Fen	MTWETISNLIHDEWMILSLLLLWSVAGVTIICERVYALWNVLAKSEVFKNHVIGAIESGDLPKAHAFC
Ga0182021_100875793	3300014502	Fen	MTWETISNLIHDEWMILLLLLLWSIAGLTIICERVYALWNVLAKSEVFKNHVIGAIESGDLPKAH
Ga0182021_115336102	3300014502	Fen	MTWETISNLIHDEWMILSLLLLWSVAGVTIICERVYALWNVLPKSEVFKNRVISAIEGGDLPKAH
Ga0182021_133498241	3300014502	Fen	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLAKSEVFKNHVIGAIESGDLPKAH
Ga0182027_107764132	3300014839	Fen	MTWETIANLIHDEWMILSLLLLWSVAGVTIICERVYALWNVLAKSEVFKNHVIGAIESG
Ga0182027_118864771	3300014839	Fen	MSWETIRNLIHDEWVILVLLLVWSVAGVAVICERIYALWGVLAKSEVFKNRVIEAVEKGD
Ga0163144_102338001	3300015360	Freshwater Microbial Mat	MTWETLRDLIRDEWIILVLLLAWSLAGLTIICERIYSLWNLLPRSEAFKDRVVGALESGDLAKARALCET
Ga0132257_1025296891	3300015373	Arabidopsis Rhizosphere	MTWETLRNLVRDEWVILSLLLAWSLAGLAVICERMYALWNLIPKSDAFRHRVVDALER
Ga0187861_100909742	3300018020	Peatland	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLPKSEVFKNRVVGAIESGDLPKAHA
Ga0187885_100163541	3300018025	Peatland	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLPKSEVFKN
Ga0190270_126740352	3300018469	Soil	MMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGD
Ga0190271_100149291	3300018481	Soil	MMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALER
Ga0182028_12739421	3300019788	Fen	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLAKSEVFKNHVIGAIEFKN
Ga0182028_14005553	3300019788	Fen	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLAKSEVFKN
Ga0224542_10417871	3300022516	Soil	MTWETILNLIHDEWMILLLLLLWSVAGVTIICERVYALWNVLPKSEVFKN
Ga0212093_12308851	3300022554	Hot Spring Sediment	MTWETITNLIHDEWAILSLLLLWSIAGVTIICERIYALWKVVPKSQVFKTQVIE
Ga0222622_100566352	3300022756	Groundwater Sediment	MSWEMMRNLIRDEWLILSLLLAWSLAGLAVICERLYALWNLIPKSEAFKNRVVDALERGD
Ga0247802_10286681	3300023077	Soil	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGD
Ga0256681_107303382	3300023311	Freshwater	MTWETISNLIHDEWMILLLLLLWSVAGVTIICERVYALWNVLPKSEVFKNHVIGAIES
Ga0210133_11226402	3300025573	Natural And Restored Wetlands	MSWETISNLIHDEWMILSLLLLWSIAGVTIICERVYSLWNVLGKSEVFKTRVIEAVEAGDLPKANALCETA
Ga0209584_103663251	3300025878	Arctic Peat Soil	MSWETIRNLLHDEWAILLLLLAWSVAGLSVICERIYSLWGVLSKSEAFKIRVIEAVEKGDLAKAAALCE
Ga0207707_113096642	3300025912	Corn Rhizosphere	MRNLVRDEWLILSLLLAWSLAGLAVICERLYALWNVIPKSEAFKNRVIDALE
Ga0207693_110298562	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSWETVRNLVRDEWLILSLLLAWSLAGLAVICERVYALWNLIPKSEAFKDRVIDAIARGDLGKAAAIS
Ga0207650_102712301	3300025925	Switchgrass Rhizosphere	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFK
Ga0207650_111135552	3300025925	Switchgrass Rhizosphere	MTWETILDLVRKEWFILSLLLLWSLAGLTIICERVYSLWNVLPKSEAFKTRVVQALESGDVS
Ga0207687_115624672	3300025927	Miscanthus Rhizosphere	MSWEMMRNLVRDEWLILSLLLAWSLAGLAVICERLYALWNVVPKSEAFKNR
Ga0207665_109619502	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTWETLRNLVRDEWVILSLLLAWSLAGLAVICERMYALWNLIPKSDAFRHRVVSIVETAPIPMP
Ga0207661_120760171	3300025944	Corn Rhizosphere	MSWEMIRNLVRDEWVILALLLVWSLAGLTVICERLYALWNILPKSEQF
Ga0207651_110577531	3300025960	Switchgrass Rhizosphere	MSWEMMRNLIRDEWLILSLLLAWSLAGLAVICERLYALWNLIPKSEAFKNRVVD
Ga0207683_101723911	3300026121	Miscanthus Rhizosphere	MALHSSVMSWEMIRNLVRDEWVILSLLLAWSLAGLTVICERVYALWNIIPKSETFKNRVIDALDNG
Ga0255357_10006113	3300026381	Soil	MTWETILNLIHDEWMILLLLLLWSVAGVTIICERVYALWNVLAKSEAFKNQVIGAIESGDLPKAHAFCE
Ga0209275_103770421	3300027884	Soil	MSWETIRNLVRDEWLILSLLLAWSLAGLAVICERLYALWNLLPKSEAFKDRVIDAIEKG
Ga0255358_10704352	3300028069	Soil	MTWETILNLIHDEWMILLLLLLWSVAGVTIICERVYALWNVLAKSEAFKNQVIGAI
Ga0265337_10802411	3300028556	Rhizosphere	MTWETIRNLVRDEWVILSLLLFWSLAGLTVICERVYSLWNVVPKSAAFKAKVIAA
Ga0265326_102428182	3300028558	Rhizosphere	MTWETIRNLLRDEWVILSLLLFWSLAGLTVICERIYALWGIVPKSEAFKNKVLAALEGGD
Ga0265323_101730791	3300028653	Rhizosphere	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLAKSEVFKNHVIAAIESG
Ga0302214_11047692	3300028736	Fen	MSWETIRNLIHDEWVILLLLLVWSVAGVAVICERIYSLWGVLAKSEVFKNRVM
Ga0302295_11356442	3300028856	Fen	MTWETIRNLIHDEWVILLLLLLWSIAGMAVICERVYALWRVLPKSEAFKNRVIEAVERGDLAKA
Ga0246001_10832581	3300029889	Peat	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLPKSEVFKNRVVGAIESGDLPK
Ga0311350_102740512	3300030002	Fen	MTWETISNLIHDEWMILSLLLLWSVAGLTIICERVYALWNVLAKSEVFKNHVIGAIESGDLPKAHAFCET
Ga0311350_113574181	3300030002	Fen	MSWETIRNLVHDEWAILSLLLVWSVAGLAVICERIYALWRVLPKSEVFKNRVVDAVSNGDLAKAAALCETGN
Ga0311350_120194771	3300030002	Fen	MTWETILNLIHDEWMILLLLVLWSVAGVTIICERVYALWNVLSKSEVF
Ga0311333_105961611	3300030114	Fen	MTWETILNLIHDEWMILLLLVLWSVAGVTIICERVYALWNVLSKSEVFKNRVIGAIESGDLPKAH
Ga0311349_110375372	3300030294	Fen	MSWETIRNLIHDEWAILLLLLVWSVAGVAVICERIYSLWGVLAKSEVFRTRVIEAVEKGDLAKATAL
Ga0311360_109723682	3300030339	Bog	MSWETIRNLIHDEWVILLLLLVWSVAGVAIICERVYSLWGVLGKSEIFKNRVIEAVEKGDLAKATAL
Ga0308200_11155192	3300030905	Soil	MTWETILDLVRKEWFILSLLLLWSLAGLTIICERVYSLWNVASKSEAFKTRVVAAIESGD
Ga0308200_11305112	3300030905	Soil	MTWETILDLVRKEWFILSLLLLWSLAGLTIICERVYSLWNVLPKSEAFKTRVVQALESGDVSKANALCE
Ga0308197_103955201	3300031093	Soil	MTWETILDLVRKEWFILSLLLLWSLAGLTIICERVYSLWNVLPKSEAFKTR
Ga0302323_1010967111	3300031232	Fen	MTWETIRNLIHDEWAILVLLLLWSVAGVAVICERIYSLWGVLPKSETFKNRVIEAVEKGDLAKASALCET
Ga0265330_100110713	3300031235	Rhizosphere	MTWETILNLIHDEWMILLLLLLWSVAGVTIICERVYALWNVLPKSEVFKNRVIGAIESGDLPKA
Ga0265339_100423742	3300031249	Rhizosphere	MTWETIRNLIHDEWVILLLLLVWSVAGLAVICERVYSLWGVLGKSEIFKNRVIEAVEKGDLAKAVALCETSNDP
Ga0265316_100979081	3300031344	Rhizosphere	MSWETIRNLVRDEWVILSLLLAWSLAGLTVICERFYALWNIIPKSELFKNRVIDALEHGDISKAAALCEM
Ga0310886_103091822	3300031562	Soil	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERLYALWNLVPKSEAFKNRVIDALERGDVAKATALCEMS
Ga0318515_103677331	3300031572	Soil	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERMYALWNVIPKSEAFKNRVVDALER
Ga0265313_100119251	3300031595	Rhizosphere	MTWETIRNLLRDEWVILSLLLFWSLAGLTVICERIYALWGIVPKSEAFKNKVLAA
Ga0306918_112212672	3300031744	Soil	MMRNLVRDEWLILTLLCAWSLAGLAVICERLYALWNLIPKSEAFKD
Ga0318502_107584492	3300031747	Soil	MMRNLVRDEWLILTLLCAWSLAGLAVICERLYALWNLIPKSEAFKDRVIGAIEHGDLSKAAALCE
Ga0318494_100144083	3300031751	Soil	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERMYALWNVIPKSEAFKNRVVDA
Ga0306925_106382951	3300031890	Soil	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERMYALWNVIPKSEAFKNRV
Ga0318522_102718762	3300031894	Soil	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERMYALWNVIPKSEAFKN
Ga0302322_1006638991	3300031902	Fen	MTWETIRNLIHDEWVILLLLLLWSIAGMAVICERVYALWRVLPKSEAFKNRVIEAVERGDLAKASALRETANDPLG
Ga0302322_1038842832	3300031902	Fen	MSWETIRNLIHDEWAILSLLLVWSVAGLAVICERIYALWNVLPKSEVFKNRVIDAVTAG
Ga0306923_106044861	3300031910	Soil	MMRNLVRDEWLILTLLCAWSLAGLAVICERLYALWNLIPKSEAFKDRVIGAIEH
Ga0318569_105354111	3300032010	Soil	MSWEMMRNLVRDEWVILSLLLAWSLAGLAVICERMYALWNVIPKSEAFKNRVVDALERND
Ga0310899_105531591	3300032017	Soil	MSWEMMRNLVRDEWVILSLLVAWSLAGLAVICERLYALWNLVPKSEAFKN
Ga0316580_102824632	3300032139	Rhizosphere	MTWETIRNLIHDEWVILSLLLLWSIAGVAVICERFYALWGVLPKSELFKNRV
Ga0335076_103011161	3300032955	Soil	MSWEMMRNLVRDEWVILTLLLAWSLAGLAVICERMYALWNLIPKSESFKNRVVDALEK
Ga0335076_113145021	3300032955	Soil	MSWETIRNLVRDEWLILSLLLAWSLAGLAVICERVYALWNIIPKSEAFKDRVIDA
Ga0214472_103596041	3300033407	Soil	MSWETIRDLIRDEWLILSLLLLWSLAGLTIICERVYALWKVIPKSEAFKNRVVAAIEAGD
Ga0316603_116951222	3300033413	Soil	MTWETIRNLIRDEWAILSLLLFWSVAGVAVICERIYALWGVLPKSETFKNRVVEAVERGDLAKAA
Ga0334815_054535_359_511	3300033797	Soil	MTWETILNLIHDEWMILLLLVLWSVAGVTIICERVYALWNVLSKSEVFKNR
Ga0334821_100675_1_192	3300033798	Soil	MTWETIANLIHDEWMILLLLLLWSVAGVTIICERVYALWNVLPKSEVFKDRVISAIEGGDLPKA
Ga0370490_0102114_2_172	3300034128	Untreated Peat Soil	MTWETIRNLIRDEWAILSLLLFWSVAGVAVICERVYALWGVLPKSETFKNRVVEAVE
Ga0370494_007810_2623_2814	3300034130	Untreated Peat Soil	MSWETIRNLVRDEWLILSLLLAWSLAGLAVICERFYALWNLLPKSEAFKDRVIDALEKGDLGKA
Ga0370495_0339980_3_149	3300034257	Untreated Peat Soil	MTWETIRNLVRDEWVILSLLLFWSLAGLTVICERVYALWNVVGKSEAFK

Hidden Markov Model


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