Metagenome Family F089041

Overview

Basic Information

• Family ID: F089041
• Family Type: Metagenome
• Number of Sequences: 109
• Average Sequence Length: 67 residues
• Representative Sequence: MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVTDGIETV
• Number of Associated Samples: 49
• Number of Associated Scaffolds: 109

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 24.53 %
• % of genes near scaffold ends (potentially truncated): 27.52 %
• % of genes from short scaffolds (< 2000 bps): 78.90 %
• Associated GOLD sequencing projects: 41
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (87.156 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (43.119 % of family members)
• Environment Ontology (ENVO): Unclassified (97.248 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (92.661 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 54.41%
  β-sheet: 0.00%
  Coil/Unstructured: 45.59%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF05869	Dam	5.50
PF00483	NTP_transferase	0.92
PF00145	DNA_methylase	0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.92

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
All Organisms	root	All Organisms	12.84 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
cellular organisms	root	All Organisms → cellular organisms	12.84 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.84 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	11.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	11.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	11.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.92 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	11.93 %
Thalassospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae	0.92 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	11.93 %
Thalassospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira	0.92 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	11.93 %
Thalassospira lohafexi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira → Thalassospira lohafexi	0.92 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.16 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	11.93 %
Thalassospira lohafexi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira → Thalassospira lohafexi	0.92 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001679|TahiMoana_1016411	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2837
3300002511|JGI25131J35506_1012506	Not Available	1170
3300002514|JGI25133J35611_10094966	Not Available	889
3300002514|JGI25133J35611_10153167	Not Available	632
3300002518|JGI25134J35505_10137181	Not Available	506
3300002760|JGI25136J39404_1008993	Not Available	1758
3300002760|JGI25136J39404_1020737	Not Available	1192
3300002760|JGI25136J39404_1025617	Not Available	1077
3300002760|JGI25136J39404_1039102	Not Available	875
3300002760|JGI25136J39404_1046498	Not Available	804
3300002760|JGI25136J39404_1071799	Not Available	646
3300002760|JGI25136J39404_1102148	Not Available	540
3300002760|JGI25136J39404_1103277	Not Available	537
3300002760|JGI25136J39404_1113791	Not Available	512
3300006306|Ga0068469_1141094	Not Available	614
3300006308|Ga0068470_1076994	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	895
3300006308|Ga0068470_1089832	Not Available	2567
3300006736|Ga0098033_1145566	Not Available	665
3300006751|Ga0098040_1144584	Not Available	705
3300006753|Ga0098039_1137268	Not Available	837
3300006926|Ga0098057_1004564	Not Available	3793
3300006926|Ga0098057_1183951	Not Available	510
3300008216|Ga0114898_1005964	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	5282
3300008216|Ga0114898_1017257	Not Available	2580
3300008216|Ga0114898_1041340	Not Available	1500
3300008216|Ga0114898_1079945	Not Available	1000
3300008216|Ga0114898_1099057	Not Available	874
3300008216|Ga0114898_1228950	Not Available	505
3300008217|Ga0114899_1012905	Not Available	3414
3300008217|Ga0114899_1146740	Not Available	770
3300008219|Ga0114905_1144652	Not Available	796
3300009412|Ga0114903_1074571	Not Available	767
3300009412|Ga0114903_1077890	Not Available	747
3300009418|Ga0114908_1166363	Not Available	700
3300009488|Ga0114925_10900287	Not Available	640
3300009602|Ga0114900_1042906	Not Available	1431
3300009602|Ga0114900_1100656	Not Available	793
3300009603|Ga0114911_1154296	Not Available	643
3300009604|Ga0114901_1085906	Not Available	1013
3300009605|Ga0114906_1020123	Not Available	2746
3300009605|Ga0114906_1070822	Not Available	1291
3300009622|Ga0105173_1064335	Not Available	636
3300010155|Ga0098047_10186490	Not Available	797
3300010155|Ga0098047_10316110	Not Available	589
3300017702|Ga0181374_1057885	Not Available	656
3300017775|Ga0181432_1000506	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	8159
3300017775|Ga0181432_1000823	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	6610
3300017775|Ga0181432_1022400	Not Available	1644
3300017775|Ga0181432_1023709	Not Available	1605
3300017775|Ga0181432_1093285	Not Available	891
3300017775|Ga0181432_1109869	Not Available	827
3300017775|Ga0181432_1138164	Not Available	743
3300017775|Ga0181432_1154793	Not Available	706
3300017775|Ga0181432_1297351	Not Available	512
3300017775|Ga0181432_1298683	Not Available	511
3300017775|Ga0181432_1304914	Not Available	505
3300020398|Ga0211637_10303266	Not Available	634
3300020427|Ga0211603_10398595	Not Available	532
3300020444|Ga0211578_10002996	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7509
3300021791|Ga0226832_10368085	Not Available	599
3300025050|Ga0207892_1046893	Not Available	507
3300025052|Ga0207906_1029611	Not Available	754
3300025078|Ga0208668_1009495	Not Available	2151
3300025112|Ga0209349_1108706	Not Available	783
3300025122|Ga0209434_1002758	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7642
3300025122|Ga0209434_1042992	Not Available	1426
3300025122|Ga0209434_1060169	Not Available	1151
3300025125|Ga0209644_1014200	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1689
3300025125|Ga0209644_1069073	Not Available	822
3300025125|Ga0209644_1103482	Not Available	674
3300025125|Ga0209644_1128388	Not Available	604
3300025251|Ga0208182_1002262	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7958
3300025251|Ga0208182_1002320	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7780
3300025251|Ga0208182_1002379	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7658
3300025251|Ga0208182_1002495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7367
3300025251|Ga0208182_1011506	Not Available	2446
3300025264|Ga0208029_1068547	Not Available	697
3300025264|Ga0208029_1069883	Not Available	688
3300025270|Ga0208813_1049606	Not Available	929
3300025270|Ga0208813_1085222	Not Available	647
3300025270|Ga0208813_1122536	Not Available	501
3300025274|Ga0208183_1098270	Not Available	536
3300025274|Ga0208183_1099820	Not Available	531
3300025286|Ga0208315_1096783	Not Available	705
3300025296|Ga0208316_1032759	Not Available	1197
3300025301|Ga0208450_1137214	Not Available	509
3300025305|Ga0208684_1160253	Not Available	521
3300025873|Ga0209757_10007538	Not Available	2833
3300025873|Ga0209757_10033022	Not Available	1481
3300025873|Ga0209757_10064372	Not Available	1090
3300025873|Ga0209757_10079377	Not Available	989
3300025873|Ga0209757_10120537	Not Available	811
3300025873|Ga0209757_10127114	Not Available	791
3300025873|Ga0209757_10146152	Not Available	739
3300025873|Ga0209757_10172450	Not Available	681
3300025873|Ga0209757_10177282	Not Available	672
3300025873|Ga0209757_10230937	Not Available	587
3300025873|Ga0209757_10239534	Not Available	576
3300025873|Ga0209757_10265861	Not Available	545
3300025873|Ga0209757_10278898	Not Available	532
3300025873|Ga0209757_10293443	Not Available	518
(restricted) 3300027881|Ga0255055_10052713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira → Thalassospira lohafexi	2272
3300032132|Ga0315336_1010824	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7570
3300032278|Ga0310345_10661749	Not Available	1009
3300034654|Ga0326741_053072	Not Available	684
3300034654|Ga0326741_058531	Not Available	646

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	80.73%
Strait	Environmental → Aquatic → Marine → Strait	11.01%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.59%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.83%
Inlet	Environmental → Aquatic → Marine → Inlet	0.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.92%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	77.06%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	11.01%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.59%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	2.75%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.92%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.92%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.92%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.92%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	43.12%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	32.11%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	11.01%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	2.75%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.75%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	1.83%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.92%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.92%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.92%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.92%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.92%
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	0.92%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300001679	Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean	Environmental
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental
3300017702	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaG	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental
3300020427	Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)	Environmental
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental
3300025270	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)	Environmental
3300025274	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)	Environmental
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental
3300025296	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)	Environmental
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental
3300027881 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27	Environmental
3300032132	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - ASW #5	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
TahiMoana_10164114	3300001679	Black Smokers Hydrothermal Plume	MPEELAYKIRNGNIKIATQEKLHRTLNFNIAEFALLEQLKTKWGLKDYSQTMLYCIWNAAIDDGIETA*
JGI25131J35506_10125062	3300002511	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVTDGIETV*
JGI25133J35611_100949662	3300002514	Marine	MPEELAYKIRNGEIRLKSQEKLHKTFNLNISEFALLEQLKQKWGFADYSQAVLYCIWNASVDDGIETV*
JGI25133J35611_101531671	3300002514	Marine	MPEELASKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIETV*
JGI25134J35505_101371811	3300002518	Marine	ELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIETV*
JGI25136J39404_10089931	3300002760	Marine	MPEELAAKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSQTVLYCIWCASVSDGIESA*
JGI25136J39404_10207373	3300002760	Marine	MPQELAQKIKTGQIAIKSQEKLHKTFNLNVSEFALLEQLKQKWGFEDYSQTMLYCIWLASVNDGIESL*
JGI25136J39404_10256174	3300002760	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVDDGIETV*
JGI25136J39404_10391021	3300002760	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVTDGIETV*
JGI25136J39404_10464982	3300002760	Marine	MPEELATKIRDGQIRINSQEKLHKTFNLNISEFALLEQLKQKWKFSDYSQTVLYCIWLASVTDGIETA*
JGI25136J39404_10717991	3300002760	Marine	MPEELAXKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVSDGIETV*
JGI25136J39404_11021482	3300002760	Marine	MPEELAYKIRNGNIKVATQEKLHRTLNFNISEFALLEQLKTKWGLKDYSQTMLYCIWNAAIDDGIETA*
JGI25136J39404_11032772	3300002760	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFSDYSETVLYCIWLASVTDGIETV*
JGI25136J39404_11137911	3300002760	Marine	MPEELAIKIRNGQIKINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIESA*
Ga0068469_11410944	3300006306	Marine	KIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV*
Ga0068470_10769942	3300006308	Marine	MPEELATKIRNGQIKINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVTDGIETG*
Ga0068470_108983210	3300006308	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV*
Ga0098033_11455661	3300006736	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIETV*
Ga0098040_11445843	3300006751	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVDDGIETV*
Ga0098039_11372682	3300006753	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV*
Ga0098057_10045647	3300006926	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIETV*
Ga0098057_11839511	3300006926	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV*
Ga0114898_10059641	3300008216	Deep Ocean	MPEELAVKIRNGNIKINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVSDGIETA*
Ga0114898_10172572	3300008216	Deep Ocean	MPEELAVKIRTGQIRINSQEKLHKTFNLNISEFALLEQLKQKWGFADYSETVLYCIWLASVSDGIETA*
Ga0114898_10413404	3300008216	Deep Ocean	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVEDGIETV*
Ga0114898_10799452	3300008216	Deep Ocean	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV*
Ga0114898_10990571	3300008216	Deep Ocean	MPKELAIKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWCASVADGIETA*
Ga0114898_12289502	3300008216	Deep Ocean	MPEELAIKIRNGRIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWCASVADGIETT*
Ga0114899_10129051	3300008217	Deep Ocean	KIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVEDGIETV*
Ga0114899_11467402	3300008217	Deep Ocean	MPEELATKIRMGQIRINSQEKLHKTFNLNISEFALLEQIKQKWGFEDYSQTVLYCIWLASVTDGIETA*
Ga0114905_11446522	3300008219	Deep Ocean	MPEELAVKIRTGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVTDGIETV*
Ga0114903_10745712	3300009412	Deep Ocean	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIE
Ga0114903_10778903	3300009412	Deep Ocean	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIE
Ga0114908_11663632	3300009418	Deep Ocean	VVICTYMPEELAVKIRNGNIKINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVSDGIETA*
Ga0114925_109002871	3300009488	Deep Subsurface	MPEELAAKIRTGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVADGIETA*
Ga0114900_10429062	3300009602	Deep Ocean	MPEELAIKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVEDGIETV*
Ga0114900_11006561	3300009602	Deep Ocean	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVTDGIE
Ga0114911_11292981	3300009603	Deep Ocean	HKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWCASVADGIETT*
Ga0114911_11542961	3300009603	Deep Ocean	LVLICTYMPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV*
Ga0114901_10859062	3300009604	Deep Ocean	MPEELAIKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVTDGIETV*
Ga0114906_10201231	3300009605	Deep Ocean	KIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV*
Ga0114906_10708225	3300009605	Deep Ocean	RNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVEDGIETV*
Ga0105173_10643351	3300009622	Marine Oceanic	MPEELAYKIRNGEIRLKSQEKLHKTFNLNISEFALLEQLKQKWGFADYSQSVLYCIWNAAVDDGIETV*
Ga0098047_101864903	3300010155	Marine	MPEELAYKIRNGEIRLKSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVDDGIETV*
Ga0098047_103161102	3300010155	Marine	MPEELASKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSQTVLYCIWCASVSDGIESA*
Ga0181374_10578852	3300017702	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFEDYSQTVLYCIWLASVTDGIETV
Ga0181432_100050611	3300017775	Seawater	MPEELASKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSQTVLYCIWCASVSDGIESA
Ga0181432_100082317	3300017775	Seawater	RNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV
Ga0181432_10224005	3300017775	Seawater	MPEELAIKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWGFADYSETVLYCIWLASVTDGIETV
Ga0181432_10237095	3300017775	Seawater	MPEELAAKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKQKWHFTDYSETVLYCIWLASVTDGIESV
Ga0181432_10251641	3300017775	Seawater	IRLKSQEKLHKTFNLNISEFALLEQLKQKWGFADYSQAVLYCIWNASVDDGIETV
Ga0181432_10932853	3300017775	Seawater	TYMPEQLATKIRTGQIKINSQEKLHKTFNLNISEFALLEQLKQKWHFTDYSETVLYCIWLAAVTDGIESA
Ga0181432_11098691	3300017775	Seawater	MPEDLAVKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVSDGIETA
Ga0181432_11381641	3300017775	Seawater	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFADYSETVLYCIWLASVTDGIETV
Ga0181432_11547931	3300017775	Seawater	MPEELAYKIRNGNIKISTQEKLHRTLNFNIAEFALLEQLKTKWGLKDYSQTMLYCIWNAAIDDGIETA
Ga0181432_12973511	3300017775	Seawater	SVLICTYMPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV
Ga0181432_12986831	3300017775	Seawater	MPEELATKIRSGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWCASVSDGIETA
Ga0181432_13049144	3300017775	Seawater	QIRINSQEKLHKTFNLNISEFALLEQLKQKWHFADYSETVLYCIWLASVTDGIETV
Ga0211637_103032663	3300020398	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV
Ga0211603_103985951	3300020427	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVTDGIETV
Ga0211578_100029961	3300020444	Marine	WYIRYFKRGKCVIMPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV
Ga0226832_103680851	3300021791	Hydrothermal Vent Fluids	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVSDGIETA
Ga0207892_10468932	3300025050	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV
Ga0207906_10296113	3300025052	Marine	MPDELAAKIRNGNIRVNSQEKLHKTFNLNIGEFALLEQLKTKWHFSDYSQTVLYCIWLASVEDGIESV
Ga0208668_10094951	3300025078	Marine	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIETV
Ga0209349_11087063	3300025112	Marine	MPEELASKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIETV
Ga0209434_10027585	3300025122	Marine	MPEELAYKIRNGEIRLKSQEKLHKTFNLNISEFALLEQLKQKWGFADYSQAVLYCIWNASVDDGIETV
Ga0209434_10429921	3300025122	Marine	KIRNGNIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSQTVLYCIWCASVSDGIES
Ga0209434_10601692	3300025122	Marine	MPEELAAKILNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVTDGIETA
Ga0209644_10142008	3300025125	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVSDGIETV
Ga0209644_10690732	3300025125	Marine	MPQELAQKIKTGQIAIKSQEKLHKTFNLNVSEFALLEQLKQKWGFEDYSQTMLYCIWLASVNDGIESL
Ga0209644_11034822	3300025125	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVDDGIETV
Ga0209644_11283882	3300025125	Marine	MPEELAAKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSQTVLYCIWLASVEDGIETV
Ga0209756_10629371	3300025141	Marine	QEKLHKTFNFNVSEFALLQQIQDKWGFQDYSQTLLYCIWLGAVNNGIETI
Ga0208182_10022625	3300025251	Deep Ocean	MPKELAIKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWCASVADGIETA
Ga0208182_100232010	3300025251	Deep Ocean	MPEELAVKIRTGQIRINSQEKLHKTFNLNISEFALLEQLKQKWGFADYSETVLYCIWLASVSDGIETA
Ga0208182_100237916	3300025251	Deep Ocean	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV
Ga0208182_10024951	3300025251	Deep Ocean	ELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV
Ga0208182_10115064	3300025251	Deep Ocean	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVEDGIETV
Ga0208029_10685472	3300025264	Deep Ocean	MPEELAIKIRNGRIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWCASVADGIETT
Ga0208029_10698831	3300025264	Deep Ocean	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIW
Ga0208813_10496063	3300025270	Deep Ocean	MPEELAIKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVEDGIETV
Ga0208813_10852222	3300025270	Deep Ocean	MPEELAVKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV
Ga0208813_11225361	3300025270	Deep Ocean	MPEELAVKIRNGNIKINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVSDGIETA
Ga0208183_10982702	3300025274	Deep Ocean	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDG
Ga0208183_10998202	3300025274	Deep Ocean	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVTDGIETV
Ga0208315_10967831	3300025286	Deep Ocean	MPEELAVKIRNGNIKINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIW
Ga0208316_10327592	3300025296	Deep Ocean	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLTSVEDGIETV
Ga0208450_11372141	3300025301	Deep Ocean	MPEELAVKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKKKWHFSDYSETVLYCIWLASVTDGIESV
Ga0208684_11602531	3300025305	Deep Ocean	SIMPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETV
Ga0209757_100075382	3300025873	Marine	MPEELAIKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWKFSDYSQTVLYCIWLASVTDGIETA
Ga0209757_100330221	3300025873	Marine	AAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFADYSETVLYCIWLASVDDGIETV
Ga0209757_100643721	3300025873	Marine	MPEELAAKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKNKWHFSDYSQTVLYCIWLASVSDGIESA
Ga0209757_100793771	3300025873	Marine	MPEELAAKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKNKWHFSDYSQTVLYCIWLASVDDGIESV
Ga0209757_101205371	3300025873	Marine	QIRINSQEKLHKTFNLNISEFALLEQLKQKWHFSDYSETVLYCIWLASVTDGIETV
Ga0209757_101271143	3300025873	Marine	ICTYMPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFADYSETVLYCIWLAAVEDGIETV
Ga0209757_101461523	3300025873	Marine	ICTYMPEELATKIRSGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVADGIETT
Ga0209757_101724501	3300025873	Marine	MPEELAAKIRNGNIRINSQEKLHKTFNLNISEFALLEQLKQKWHFPDYSETVLYCIWLASVTDGIETV
Ga0209757_101772823	3300025873	Marine	MPEELAYKIRNGNIKVATQEKLHRTLNFNISEFALLEQLKTKWGLKDYSQTMLYCIWNAAIDDGIETV
Ga0209757_102309372	3300025873	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWCASVSDGIETA
Ga0209757_102395343	3300025873	Marine	PEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV
Ga0209757_102658612	3300025873	Marine	MPEELASKIRNGNIRINSQEKLHKTFNLNIGEFALLEQLKNKWHFQDYSQTVLYCIWLASVEDGIETV
Ga0209757_102788981	3300025873	Marine	ELAIKIRNGQIKINSQEKLHKTFNLNISEFALLEQLKQKWHFEDYSQTVLYCIWLASVTDGIESA
Ga0209757_102934431	3300025873	Marine	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWL
(restricted) Ga0255055_100527131	3300027881	Seawater	MPQELAQKIKSGQIAIKSQEKLHKTFNLNVSEFALLEQLKQKWGFEDYSQTMLYCIWLASVNDGIESL
Ga0315336_10108243	3300032132	Seawater	MPEELATKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVSDGIETV
Ga0310345_106617491	3300032278	Seawater	MPEELATKIRNGQIKINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLAAVTDGIETG
Ga0326741_053072_2_205	3300034654	Filtered Seawater	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVEDGIETS
Ga0326741_058531_135_341	3300034654	Filtered Seawater	MPEELAAKIRNGQIRINSQEKLHKTFNLNISEFALLEQLKTKWHFSDYSETVLYCIWLASVQDGIETV