NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F089039

Metagenome Family F089039

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089039
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 65 residues
Representative Sequence MKAKGFPNKMTRGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS
Number of Associated Samples 67
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.24 %
% of genes near scaffold ends (potentially truncated) 16.51 %
% of genes from short scaffolds (< 2000 bps) 77.06 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (78.899 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean
(40.367 % of family members)
Environment Ontology (ENVO) Unclassified
(98.165 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(81.651 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 19.35%    β-sheet: 0.00%    Coil/Unstructured: 80.65%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF137592OG-FeII_Oxy_5 63.30
PF08291Peptidase_M15_3 3.67
PF16778Phage_tail_APC 2.75
PF11351GTA_holin_3TM 1.83
PF05063MT-A70 0.92
PF05866RusA 0.92
PF06067DUF932 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG4725N6-adenosine-specific RNA methylase IME4Translation, ribosomal structure and biogenesis [J] 1.83
COG4570Holliday junction resolvase RusA (prophage-encoded endonuclease)Replication, recombination and repair [L] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A78.90 %
All OrganismsrootAll Organisms21.10 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001516|TahiMoana_1071983Not Available606Open in IMG/M
3300002484|JGI25129J35166_1000627Not Available11597Open in IMG/M
3300002484|JGI25129J35166_1076850Not Available606Open in IMG/M
3300002511|JGI25131J35506_1007711Not Available1500Open in IMG/M
3300002511|JGI25131J35506_1046135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea → unclassified Nisaea → Nisaea sp.604Open in IMG/M
3300002760|JGI25136J39404_1000486All Organisms → cellular organisms → Bacteria6167Open in IMG/M
3300002760|JGI25136J39404_1061928Not Available696Open in IMG/M
3300002760|JGI25136J39404_1066414Not Available671Open in IMG/M
3300003690|PicViral_1000883Not Available23684Open in IMG/M
3300003690|PicViral_1001707Not Available8910Open in IMG/M
3300006310|Ga0068471_1010110Not Available1958Open in IMG/M
3300006310|Ga0068471_1441999Not Available1411Open in IMG/M
3300006339|Ga0068481_1021577Not Available2660Open in IMG/M
3300006340|Ga0068503_10031523Not Available685Open in IMG/M
3300006736|Ga0098033_1028874Not Available1691Open in IMG/M
3300006736|Ga0098033_1189561Not Available571Open in IMG/M
3300006738|Ga0098035_1059276Not Available1382Open in IMG/M
3300006751|Ga0098040_1061470Not Available1157Open in IMG/M
3300006927|Ga0098034_1024738Not Available1831Open in IMG/M
3300006929|Ga0098036_1000362Not Available20447Open in IMG/M
3300006929|Ga0098036_1206700Not Available596Open in IMG/M
3300006988|Ga0098064_129319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria741Open in IMG/M
3300007963|Ga0110931_1170075Not Available653Open in IMG/M
3300008216|Ga0114898_1018628Not Available2454Open in IMG/M
3300008216|Ga0114898_1028455Not Available1887Open in IMG/M
3300008216|Ga0114898_1196029Not Available562Open in IMG/M
3300008217|Ga0114899_1010650All Organisms → cellular organisms → Bacteria → Proteobacteria3858Open in IMG/M
3300008217|Ga0114899_1128272Not Available838Open in IMG/M
3300008217|Ga0114899_1177705Not Available683Open in IMG/M
3300008218|Ga0114904_1000201Not Available33664Open in IMG/M
3300008218|Ga0114904_1011932All Organisms → Viruses → Predicted Viral2816Open in IMG/M
3300008218|Ga0114904_1047103All Organisms → Viruses → Predicted Viral1138Open in IMG/M
3300008219|Ga0114905_1015593All Organisms → Viruses → Predicted Viral3080Open in IMG/M
3300008219|Ga0114905_1159331Not Available747Open in IMG/M
3300008220|Ga0114910_1050018Not Available1343Open in IMG/M
3300008220|Ga0114910_1064651Not Available1143Open in IMG/M
3300008220|Ga0114910_1083470Not Available971Open in IMG/M
3300009173|Ga0114996_10893184Not Available637Open in IMG/M
3300009412|Ga0114903_1071197Not Available789Open in IMG/M
3300009412|Ga0114903_1101647Not Available637Open in IMG/M
3300009413|Ga0114902_1040085All Organisms → Viruses → Predicted Viral1403Open in IMG/M
3300009414|Ga0114909_1066336Not Available1036Open in IMG/M
3300009414|Ga0114909_1153945Not Available607Open in IMG/M
3300009414|Ga0114909_1168366Not Available572Open in IMG/M
3300009418|Ga0114908_1036753All Organisms → Viruses → Predicted Viral1821Open in IMG/M
3300009603|Ga0114911_1166976Not Available612Open in IMG/M
3300009604|Ga0114901_1027802All Organisms → Viruses → Predicted Viral2122Open in IMG/M
3300009620|Ga0114912_1143182Not Available560Open in IMG/M
3300009622|Ga0105173_1018337All Organisms → Viruses → Predicted Viral1042Open in IMG/M
3300009622|Ga0105173_1022171Not Available966Open in IMG/M
3300010151|Ga0098061_1077340Not Available1260Open in IMG/M
3300010153|Ga0098059_1237845Not Available704Open in IMG/M
3300010155|Ga0098047_10164414Not Available856Open in IMG/M
3300017775|Ga0181432_1280105Not Available528Open in IMG/M
3300020425|Ga0211549_10257977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea → unclassified Nisaea → Nisaea sp.699Open in IMG/M
3300021791|Ga0226832_10025565Not Available1954Open in IMG/M
(restricted) 3300024518|Ga0255048_10091118Not Available1511Open in IMG/M
(restricted) 3300024520|Ga0255047_10056261Not Available2041Open in IMG/M
3300025042|Ga0207889_1015385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED247711Open in IMG/M
3300025044|Ga0207891_1045519Not Available515Open in IMG/M
3300025046|Ga0207902_1011637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED247964Open in IMG/M
3300025049|Ga0207898_1002118All Organisms → cellular organisms → Bacteria → Proteobacteria2175Open in IMG/M
3300025082|Ga0208156_1053072Not Available808Open in IMG/M
3300025097|Ga0208010_1106679Not Available572Open in IMG/M
3300025112|Ga0209349_1000187Not Available34192Open in IMG/M
3300025112|Ga0209349_1000894Not Available15001Open in IMG/M
3300025125|Ga0209644_1004106Not Available2873Open in IMG/M
3300025125|Ga0209644_1062462Not Available861Open in IMG/M
3300025125|Ga0209644_1094541Not Available705Open in IMG/M
3300025125|Ga0209644_1131338Not Available597Open in IMG/M
3300025128|Ga0208919_1000355Not Available32798Open in IMG/M
3300025128|Ga0208919_1078650Not Available1084Open in IMG/M
3300025216|Ga0207883_1032441Not Available657Open in IMG/M
3300025218|Ga0207882_1008044Not Available1687Open in IMG/M
3300025218|Ga0207882_1020643Not Available970Open in IMG/M
3300025241|Ga0207893_1017530Not Available987Open in IMG/M
3300025251|Ga0208182_1001931Not Available8969Open in IMG/M
3300025251|Ga0208182_1002001Not Available8717Open in IMG/M
3300025251|Ga0208182_1067233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED247701Open in IMG/M
3300025251|Ga0208182_1071076Not Available673Open in IMG/M
3300025264|Ga0208029_1002028Not Available8201Open in IMG/M
3300025264|Ga0208029_1036228All Organisms → Viruses → Predicted Viral1111Open in IMG/M
3300025267|Ga0208179_1104013Not Available556Open in IMG/M
3300025268|Ga0207894_1074255Not Available580Open in IMG/M
3300025270|Ga0208813_1053037Not Available890Open in IMG/M
3300025280|Ga0208449_1065461Not Available932Open in IMG/M
3300025286|Ga0208315_1006186Not Available4600Open in IMG/M
3300025286|Ga0208315_1023156All Organisms → cellular organisms → Bacteria1905Open in IMG/M
3300025296|Ga0208316_1066654Not Available705Open in IMG/M
3300025301|Ga0208450_1022627All Organisms → cellular organisms → Bacteria1787Open in IMG/M
3300025301|Ga0208450_1034041All Organisms → Viruses → Predicted Viral1347Open in IMG/M
3300025301|Ga0208450_1096684Not Available651Open in IMG/M
3300025873|Ga0209757_10024639Not Available1687Open in IMG/M
3300028022|Ga0256382_1168696Not Available523Open in IMG/M
3300028039|Ga0256380_1008474All Organisms → Viruses → Predicted Viral1617Open in IMG/M
3300031804|Ga0310124_10015656All Organisms → cellular organisms → Bacteria → Proteobacteria4741Open in IMG/M
3300031804|Ga0310124_10108827All Organisms → Viruses → Predicted Viral1718Open in IMG/M
3300032006|Ga0310344_10000386Not Available35150Open in IMG/M
3300032006|Ga0310344_11547993Not Available540Open in IMG/M
3300032278|Ga0310345_10007645Not Available9306Open in IMG/M
3300032278|Ga0310345_11165391Not Available754Open in IMG/M
3300032820|Ga0310342_102466777Not Available622Open in IMG/M
3300034654|Ga0326741_035529Not Available861Open in IMG/M
3300034654|Ga0326741_063790Not Available615Open in IMG/M
3300034654|Ga0326741_065333Not Available607Open in IMG/M
3300034654|Ga0326741_073173Not Available567Open in IMG/M
3300034654|Ga0326741_089365Not Available505Open in IMG/M
3300034656|Ga0326748_003840Not Available1921Open in IMG/M
3300034656|Ga0326748_057708Not Available550Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean40.37%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine32.11%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater6.42%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater4.59%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine2.75%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.83%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.83%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.83%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.83%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume1.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.92%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.92%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.92%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Hydrothermal Vent Plume0.92%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.92%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001516Hydrothermal vent plume microbial communities from Tahi Moana, Pacific Ocean, of black smokersEnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006988Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsClEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020425Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025044Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025216Marine viral communities from the Deep Pacific Ocean - MSP-109 (SPAdes)EnvironmentalOpen in IMG/M
3300025218Marine viral communities from the Deep Pacific Ocean - MSP-103 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025268Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025296Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028039Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300mEnvironmentalOpen in IMG/M
3300031804Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
TahiMoana_107198313300001516Hydrothermal Vent PlumeAQMGAYKGIQKAENYPGGLNIQAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS*
JGI25129J35166_100062723300002484MarineMAKNGKGFPGPMTPAQMGAYRGIQKAETDPGGLDIRAGNEMGFRSKDWRVKSGADKPDTFGMKIRKG*
JGI25129J35166_107685023300002484MarineMAKGFPNKMTRGQMGAYKGIQEAEYFRGGLNIQAGNELGFRSKGWRVKKGADKPGTFGMKLRRS*
JGI25131J35506_100771133300002511MarineMAKKSKGFPGPMTREQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKRAADKPGTFGMKIRKA*
JGI25131J35506_104613523300002511MarineMKAKGFPHKMTSGQMGAYKGIQRAEHFRGGLNIRAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS*
JGI25136J39404_100048663300002760MarineMAKKSKGFPGPMTRAQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKRAADKPGTFGMKIRKA*
JGI25136J39404_106192823300002760MarineMKGKGFPNKMTSGQMGAYRGIQKAEHFRGGLNIRAGNEMGFRSTGRRVKRGADKPGTFGMKLRRS*
JGI25136J39404_106641433300002760MarineMAKNGKGFPGPMTRAQRGAYSGIQKAETYPGGLDIRAGNEMGFRSKGWRVKKGADKPGTFGMKLRKA*
PicViral_100088353300003690Marine, Hydrothermal Vent PlumeMATNRKGFPGPMTRGQMGAYKGIQKAENFPGGLNIRAGNEMGFRSKGRRVKPGADKPGTFGMKLRRS*
PicViral_100170783300003690Marine, Hydrothermal Vent PlumeMAKNSKGFPGPMTRAQMGAYKGIQKAETYPGGLDIRAGNELGFRSKGWRVKRGADKPSTFGMKLRRGY*
Ga0068471_101011043300006310MarineMAKRKGFPGKMTRGQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKSGADKPGTFGMKLRRS*
Ga0068471_144199933300006310MarineMKAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKSGADKPGTFGMKLRRS*
Ga0068481_102157713300006339MarineAKRKGFPGKMTRGQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKSGADKPGTFGMKLRRS*
Ga0068503_1003152323300006340MarineMKAKGFPHKMTSGQMGAYKGIQRAEHFRGGLNIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS*
Ga0098033_102887423300006736MarineMAKGFPNKMTSGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKSGADKSDTFGMKLRRS*
Ga0098033_118956113300006736MarineNWTRRKTMKAKGFPHKMTSGQMGAYKGIQRAEHFRGGLNIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS*
Ga0098035_105927623300006738MarineMAKGFPNKMTSGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS*
Ga0098040_106147023300006751MarineMKAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKSDTFGMKLRRS*
Ga0098034_102473833300006927MarineMAKGFPNKMTSGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS*
Ga0098036_1000362133300006929MarineMATSKKKGFPGPMTRGQMGAYKGIQKAENFPGGLDIRAGNELGFRSKGWRVKRGADKPGTFGMKLRKA*
Ga0098036_120670023300006929MarineMAKNSKGFPGPMTKAQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKQGADKSDTFGMKLRKA*
Ga0098064_12931923300006988MarineMKAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS*
Ga0110931_117007523300007963MarineMMMAKNGKGFPGPMTKAQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKQGADKSDTFGMKLRKA*
Ga0114898_101862873300008216Deep OceanMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSEGWRVKSDADKGGKRETFGMKLRKQRS*
Ga0114898_102845563300008216Deep OceanMAKGFPNKMTSGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKDWRVKRGADKPGTFGMKLRRS*
Ga0114898_119602923300008216Deep OceanMTKGQMGAYKGIQKAENWPGGLDIRAGNELGFRSKGRSVKRGADKPGTFGMKLRKA*
Ga0114899_101065043300008217Deep OceanMAKNSKGFPGPMTRAQMGAYKGIQKAETYPGGLDIRAGNELGFRSKGWRVKRGADKPGTFGMKLRKA*
Ga0114899_112827223300008217Deep OceanMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSEGWRVKSGADKPGTFGMKLRKQRS*
Ga0114899_117770523300008217Deep OceanMATSKKKGFPGPMTRGQMGAYKGIQKEEYYPGGLDITAGNEMGFRSKGWRVKRGADKLTFGMKLRRT*
Ga0114904_1000201463300008218Deep OceanMKARKGFPGPMTKGQMGAYKGIQKAENWPGGLDIRAGNELGFRSKGRSVKRGADKPGTFGMKLRKA*
Ga0114904_101193213300008218Deep OceanSKKKGFPGPMTRGQMGAYKGIQKAENFPGGLDIRAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA*
Ga0114904_104710343300008218Deep OceanMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSKGWRVKPDADKGGKRETFGVTLRRERI*
Ga0114905_101559363300008219Deep OceanMATSKKKGFPGPMTRRQMGAYKGIQKKGYYPGGLDITAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA*
Ga0114905_115933133300008219Deep OceanAKGFPNKMTSGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS*
Ga0114910_105001823300008220Deep OceanMAKGFPNKMTRGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKDWRVKRGADKPGTFGMKLRRS*
Ga0114910_106465123300008220Deep OceanMATSKKKGFPGPMTRGQMGAYKGIQKAENFPGGLDIRAGNEMGFRSEGWRVKRGADKRGTFGRKLRKA*
Ga0114910_108347013300008220Deep OceanMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSKGWRVKSDADKGGNRETFGVTLRKQRS*
Ga0114996_1089318423300009173MarineMAKNGKGFPGPMTRGQGRAYRGIQKAETYPGGLDIRAGNEMGFRSKGWRVKSGADKPGTFGMKLRKG*
Ga0114903_107119723300009412Deep OceanMATSKKKGFPGPMTRGQMGAYKGIQKAENFPGGLDIRAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA*
Ga0114903_110164713300009412Deep OceanAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS*
Ga0114902_104008523300009413Deep OceanMATSKKKGFPGPMTRGQMGAYKGIQEAENFPGGLDIRAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA*
Ga0114909_106633643300009414Deep OceanVNWTRRKTMKAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKSDTFGMKLRRS*
Ga0114909_115394523300009414Deep OceanMKAKGCPNKMTRGQMGAYKGIQRAENFPGGLNIQAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS*
Ga0114909_116836623300009414Deep OceanMTRGQMGAYKGIQKKGYYPGGLDITAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA*
Ga0114908_103675323300009418Deep OceanMATSKKKGFPGPMTRRQMGAYKGIQKKGYYPGGLDITAGNELGFRSEGWRVKRGADKRGTFGMKLRKA*
Ga0114911_116697623300009603Deep OceanMTRAQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKRAADKPGTFGMKIRKA*
Ga0114901_102780233300009604Deep OceanMSTSKKKGFPGPMTRGQMGAYKGIQKKEYYPGGLDITAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA*
Ga0114912_114318223300009620Deep OceanMTRGQMGAYKGIQKKEYYPGGLDITAGNEMGFRSEGWRVKRGADKRGTFGMKLRKAYHGD
Ga0105173_101833723300009622Marine OceanicMAKKSKGFPGPMTRAQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKSAADKPGTFGMKIRKA*
Ga0105173_102217123300009622Marine OceanicMKGKGFPHKMTSGQMGAYRGIQKAEHYPGGLDIRAGNEMGFRSTGRRVKRGADKPGTFGMKLRRS*
Ga0098061_107734023300010151MarineMKAKGFPNKMTRGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS*
Ga0098059_123784513300010153MarineMAKGFPNKMTRGQMGAYKGIQKAEHYPGGLDIRAGNEMGFRSKGWRVKKGADKPGTFGMKLRRS*
Ga0098047_1016441413300010155MarineNWTRRKKMAKGFPNKMTSGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKSDTFGMKLRRS*
Ga0181432_128010523300017775SeawaterRKKMAKGFPNKMTSGQMGAYRGIQKAENYPGGLDIRAGNEMGFRSTGRRVKRGADKPGTFGMKLRRS
Ga0211549_1025797723300020425MarineMKAKGFPNKMTRGQMGAYMGIQRAEHFRGGLNIQAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0226832_1002556533300021791Hydrothermal Vent FluidsMKAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKPDTFGMKLRRS
(restricted) Ga0255048_1009111833300024518SeawaterMKAKGFPHKMTSGQMGAYRGIQKAEQYPGGLNIRAGNEMGFRSTGRRVKRGADKPGTFGMKLRRS
(restricted) Ga0255047_1005626163300024520SeawaterMAKGFPNKMTSGQMGAYKGVQKAENYPGGLDIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0207889_101538523300025042MarineMKGKGFPNKMTSGQMGAYRGIQKAEHFRGGLNIRAGNEMGFRSTGRRVKRGADKPGTFGMKLRRS
Ga0207891_104551923300025044MarineMKAKGFPHKMTSGQMGAYRGIQKAEHYPGGLDIRAGNEMGFRSSGRRVKRGADKPGTFGMKLRRS
Ga0207902_101163723300025046MarineMAKGFPNKMTRGQMGAYMGIQRAEHFRGGLNIRAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS
Ga0207898_100211833300025049MarineMKGKGFPHKMTSGQMGAYRGIQKAEHYPGGLDIRAGNEMGFRSSGRRVKRGADKPGTFGMKLRRS
Ga0208156_105307223300025082MarineMAKGFPNKMTSGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKSGADKSDTFGMKLRRS
Ga0208010_110667913300025097MarineMAKGFPNKMTRGQMGAYKGIQRAENFPGGLNIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0209349_1000187233300025112MarineMAKNGKGFPGPMTPAQMGAYRGIQKAETDPGGLDIRAGNEMGFRSKDWRVKSGADKPDTFGMKIRKG
Ga0209349_1000894353300025112MarineMAKGFPNKMTRGQMGAYKGIQEAEYFRGGLNIQAGNELGFRSKGWRVKKGADKPGTFGMKLRRS
Ga0209644_100410653300025125MarineMAKKSKGFPGPMTREQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKRAADKPGTFGMKIRKA
Ga0209644_106246233300025125MarineMKAKGFPHKMTSGQMGAYKGIQRAEHFRGGLNIRAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS
Ga0209644_109454123300025125MarineMAKGFPNKMTSGQMGAYRGIQKAEHFRGGLNIRAGNEMGFRSTGRRVKRGADKPGTFGMKLRRS
Ga0209644_113133823300025125MarineMAKNGKGFPGPMTRAQRGAYSGIQKAETYPGGLDIRAGNEMGFRSKGWRVKKGADKPGTFGMKLRKA
Ga0208919_1000355273300025128MarineMATSKKKGFPGPMTRGQMGAYKGIQKAENFPGGLDIRAGNELGFRSKGWRVKRGADKPGTFGMKLRKA
Ga0208919_107865023300025128MarineMAKNSKGFPGPMTKAQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKQGADKSDTFGMKLRKA
Ga0207883_103244113300025216Deep OceanMKGKGFPHKMTSGQMGAYKGIQKAEHYPGGLDIRAGNEMGFRSTGRRVKAGADKPGTFGMKLRRS
Ga0207882_100804433300025218Deep OceanMKGKGFPHKMTSGQMGAYRGIQKAEHYPGGLDIRAGNEMGFRSTGRRVKAGADKPGTFGMKLRRS
Ga0207882_102064333300025218Deep OceanMAKKSKGFPGPMTRAQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKSAADKPGTFGMKIRKA
Ga0207893_101753023300025241Deep OceanMAKKSKGFPGPMTRAQMGAYKGIQKAEIYPGGLDIRAGNEMGFRSKGWRVKSAADKPGTFGMKIRKA
Ga0208182_100193173300025251Deep OceanMKARKGFPGPMTKGQMGAYKGIQKAENWPGGLDIRAGNELGFRSKGRSVKRGADKPGTFGMKLRKA
Ga0208182_100200143300025251Deep OceanMKAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKSDTFGMKLRRS
Ga0208182_106723323300025251Deep OceanMAKKSKGFPGPMTRAQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKRAADKPGTFGMKIRKA
Ga0208182_107107633300025251Deep OceanMARSKKGFPGPMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSEGWRVKSGADKPGTFGMKLRKQRS
Ga0208029_100202873300025264Deep OceanMAKGFPNKMTSGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKDWRVKRGADKPGTFGMKLRRS
Ga0208029_103622843300025264Deep OceanMAKNSKGFPGPMTRAQMGAYKGIQKAETYPGGLDIRAGNELGFRSKGWRVKRGADKPGTFGMKLRKA
Ga0208179_110401333300025267Deep OceanGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0207894_107425513300025268Deep OceanMAKGFPNKMTSGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0208813_105303723300025270Deep OceanMARSKKGFPGPMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSEGWRVKSGADKPGTFGVTLRRERI
Ga0208449_106546123300025280Deep OceanMSTSKKKGFPGPMTRRQMGAYKGIQKKGYYPGGLDITAGNELGFRSEGWRVKRGADKRGTFGMKLRKA
Ga0208315_100618643300025286Deep OceanMKAKGFPNKMTRGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0208315_102315613300025286Deep OceanKSKGFPGPMTRAQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKRAADKPGTFGMKIRKA
Ga0208316_106665423300025296Deep OceanMARSKKGFPGPMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSEGWRVKSDADKGGKRETFGVTLRKQRS
Ga0208450_102262713300025301Deep OceanKGFPGPMTRAQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKRAADKPGTFGMKIRKA
Ga0208450_103404133300025301Deep OceanMATSKKKGFPGPMTRGQMGAYKGIQKAENFPGGLDIRAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA
Ga0208450_109668423300025301Deep OceanMARSKKGFPGPMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSEGWRVKSDADKGGKRETFG
Ga0209757_1002463913300025873MarineMKAKGFPHKMTSGQMGAYKGIQRAEHFRGGLNIRAGNEMGFRSKGWRVKAGADKPGTFGM
Ga0256382_116869613300028022SeawaterSEVRQMARSKKGFPGPMTRGQMGAYKGIQKAERYPGGLDIRAGNEMGFRSEGWRVKSGADKPGTFGMKLRKQRS
Ga0256380_100847433300028039SeawaterMTRRQMGAYKGIQKKGYYPGGLDITAGNELGFRSEGWRVKRGADKRGTFGMKLRKA
Ga0310124_1001565673300031804MarineMAQRKGFPGPMTRGQKGAYRGIQKKENYPGGLDITAGNEMGFRSEGRSVKRGADKRGTFGMKLRRA
Ga0310124_1010882763300031804MarineMATRKGFPGKMTREQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKDWRVKRGADKPGTFGMKLRKA
Ga0310344_1000038663300032006SeawaterMATSKKKGFPGPMTRGQMGAYKGIQKKEYYPGGLDITAGNEMGFRSEGWRVKRGADKRGTFGMKLRKA
Ga0310344_1154799333300032006SeawaterPNKMTRGQMGAYKGIQKAENYPGGLDIRAGNEMGFRSKGWRVKKGADKPGTFGMKLRRS
Ga0310345_10007645103300032278SeawaterMAKRKGFPGKMTRGQMGAYKGIQKAEVYPGGLDIRAGNEMGFRSKGWRVKSGADKPGTFGMKLRRS
Ga0310345_1116539123300032278SeawaterMATSKKKGFPGPMTRGQMGAYKGIQKKEYYPGGLDIAAGNEMGFRSKGWRVKRGADKRGTFGMKLRRT
Ga0310342_10246677723300032820SeawaterMAKNGKGFPGPMTKAQMGAYKGIQKAENFPGGLNIRAGNELGFRSEDWRVKRGADKSDTFGMTLRKQRS
Ga0326741_035529_344_5413300034654Filtered SeawaterMKAKGFPNKMTRGQMGAYKGIQREENFPGGLNIRAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0326741_063790_402_6023300034654Filtered SeawaterMAQRKGFPGPMTRGQKGAYRGIQKKENYPGGLDITAGNEMGFRSEGRSVKRGADKRGTFGMKLRRT
Ga0326741_065333_95_2923300034654Filtered SeawaterMKAKGFPHKMTSGQMGAYKGIQKAEYFRGGLNIQAGNEMGFRSKGWRVKAGADKPGTFGMKLRRS
Ga0326741_073173_151_3543300034654Filtered SeawaterMAKNSKGFPGPMTRAQMGAYKGIQKAETYPGGLDIRAGNELGFRSKGWRVKRGADKPSTFGMKLRKA
Ga0326741_089365_35_2323300034654Filtered SeawaterMKGKGFPNKMTSGQMGAYRGIQKAEYYPGGLDIRAGNEMGFRSSGRRVKRGADKPGTFGMKLRRS
Ga0326748_003840_358_5523300034656Filtered SeawaterMAKGFPNKMTPAQMGAYKGIQKAENYPGGLNIQAGNEMGFRSKGWRVKRGADKPGTFGMKLRRS
Ga0326748_057708_374_5503300034656Filtered SeawaterGPMTRGQKGAYRGIQKKENYPGGLDITAGNEMGFRSEGRSVKRGADKRGTFGMKLRRT


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