Metagenome / Metatranscriptome Family F089038

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089038
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	54 residues
Representative Sequence	MKSWWKSKTFWLNIATLGVASAVEQPNPEALAQILAVANIVLRFFTRTEIGR
Number of Associated Samples	50
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	91.74 %
% of genes near scaffold ends (potentially truncated)	12.84 %
% of genes from short scaffolds (< 2000 bps)	65.14 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	environmental samples (50.459 % of family members)
NCBI Taxonomy ID	186616
Taxonomy	All Organisms → Viruses → environmental samples

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean (41.284 % of family members)
Environment Ontology (ENVO)	Unclassified (96.330 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (80.734 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.75% β-sheet: 0.00% Coil/Unstructured: 51.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13481	AAA_25	9.17
PF03237	Terminase_6N	8.26
PF08774	VRR_NUC	3.67
PF12957	DUF3846	2.75
PF12705	PDDEXK_1	1.83
PF12840	HTH_20	1.83
PF03167	UDG	1.83
PF01464	SLT	1.83
PF11134	Phage_stabilise	1.83
PF04404	ERF	1.83
PF12850	Metallophos_2	1.83
PF03796	DnaB_C	0.92
PF01507	PAPS_reduct	0.92
PF07728	AAA_5	0.92
PF13203	DUF2201_N	0.92
PF01242	PTPS	0.92
PF11284	DUF3085	0.92
PF11651	P22_CoatProtein	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.83
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	1.83
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	1.83
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.92
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.92
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	61.47 %
Unclassified	root	N/A	28.44 %
cellular organisms	root	All Organisms → cellular organisms	10.09 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → environmental samples	50.46 %
Unclassified	root	N/A	28.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.75 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.92 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.75 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.92 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.75 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.92 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.92 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.92 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.75 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.92 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.92 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.92 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.75 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.92 %
Aneurinibacillus group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Aneurinibacillus group	0.92 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.92 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.75 %
Aneurinibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Aneurinibacillus group → Aneurinibacillus	0.92 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.92 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.92 %

Name	Rank	Taxonomy	Distribution
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	50.46 %
Unclassified	root	N/A	28.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.34 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.75 %
Aneurinibacillus migulanus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Aneurinibacillus group → Aneurinibacillus → Aneurinibacillus migulanus	0.92 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.92 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002511\|JGI25131J35506_1021742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Aneurinibacillus group → Aneurinibacillus → Aneurinibacillus migulanus	883	Open in IMG/M
3300002760\|JGI25136J39404_1012487	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1517	Open in IMG/M
3300002760\|JGI25136J39404_1059270	Not Available	712	Open in IMG/M
3300003690\|PicViral_1000102	Not Available	58155	Open in IMG/M
3300003690\|PicViral_1002339	Not Available	6059	Open in IMG/M
3300003690\|PicViral_1007374	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4553	Open in IMG/M
3300003702\|PicMicro_10008165	Not Available	46698	Open in IMG/M
3300006310\|Ga0068471_1048425	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1561	Open in IMG/M
3300006315\|Ga0068487_1052427	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	515	Open in IMG/M
3300006318\|Ga0068475_1046961	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1684	Open in IMG/M
3300006318\|Ga0068475_1057582	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2339	Open in IMG/M
3300006318\|Ga0068475_1109202	All Organisms → Viruses → Predicted Viral	1269	Open in IMG/M
3300006318\|Ga0068475_1229486	Not Available	1075	Open in IMG/M
3300006340\|Ga0068503_10017026	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	720	Open in IMG/M
3300006340\|Ga0068503_10181661	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	734	Open in IMG/M
3300006341\|Ga0068493_10001126	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1586	Open in IMG/M
3300006753\|Ga0098039_1124913	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	883	Open in IMG/M
3300006841\|Ga0068489_104681	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1389	Open in IMG/M
3300006929\|Ga0098036_1029847	Not Available	1713	Open in IMG/M
3300006929\|Ga0098036_1060500	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300006929\|Ga0098036_1206914	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	595	Open in IMG/M
3300007963\|Ga0110931_1065248	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1099	Open in IMG/M
3300008216\|Ga0114898_1001823	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	11865	Open in IMG/M
3300008216\|Ga0114898_1001984	All Organisms → Viruses	11242	Open in IMG/M
3300008216\|Ga0114898_1003528	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	7535	Open in IMG/M
3300008216\|Ga0114898_1030449	Not Available	1809	Open in IMG/M
3300008216\|Ga0114898_1150072	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	671	Open in IMG/M
3300008217\|Ga0114899_1024495	All Organisms → Viruses → Predicted Viral	2303	Open in IMG/M
3300008217\|Ga0114899_1046874	Not Available	1553	Open in IMG/M
3300008217\|Ga0114899_1054285	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1421	Open in IMG/M
3300008217\|Ga0114899_1055778	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1397	Open in IMG/M
3300008217\|Ga0114899_1206170	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	621	Open in IMG/M
3300008217\|Ga0114899_1250471	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	546	Open in IMG/M
3300008218\|Ga0114904_1002087	Not Available	9150	Open in IMG/M
3300008218\|Ga0114904_1004526	All Organisms → cellular organisms → Bacteria	5553	Open in IMG/M
3300008218\|Ga0114904_1012917	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2660	Open in IMG/M
3300008218\|Ga0114904_1023752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	1763	Open in IMG/M
3300008218\|Ga0114904_1077469	Not Available	831	Open in IMG/M
3300008219\|Ga0114905_1016365	Not Available	2995	Open in IMG/M
3300008220\|Ga0114910_1014834	Not Available	2827	Open in IMG/M
3300008220\|Ga0114910_1062658	Not Available	1166	Open in IMG/M
3300009412\|Ga0114903_1059629	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	879	Open in IMG/M
3300009413\|Ga0114902_1095729	Not Available	796	Open in IMG/M
3300009413\|Ga0114902_1148133	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	597	Open in IMG/M
3300009604\|Ga0114901_1089956	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	983	Open in IMG/M
3300009604\|Ga0114901_1156018	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	682	Open in IMG/M
3300009605\|Ga0114906_1016100	Not Available	3128	Open in IMG/M
3300009605\|Ga0114906_1044605	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1713	Open in IMG/M
3300009605\|Ga0114906_1243806	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	588	Open in IMG/M
3300009605\|Ga0114906_1260463	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	562	Open in IMG/M
3300009605\|Ga0114906_1269827	Not Available	548	Open in IMG/M
3300017772\|Ga0181430_1043190	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1412	Open in IMG/M
3300020398\|Ga0211637_10159682	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	901	Open in IMG/M
3300020398\|Ga0211637_10383840	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	556	Open in IMG/M
3300020434\|Ga0211670_10138922	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	958	Open in IMG/M
3300020477\|Ga0211585_10000934	All Organisms → cellular organisms → Bacteria	43724	Open in IMG/M
3300020477\|Ga0211585_10005043	Not Available	14042	Open in IMG/M
3300021791\|Ga0226832_10283226	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	671	Open in IMG/M
3300025042\|Ga0207889_1013086	Not Available	771	Open in IMG/M
3300025046\|Ga0207902_1035481	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	616	Open in IMG/M
3300025050\|Ga0207892_1022054	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300025112\|Ga0209349_1167300	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	581	Open in IMG/M
3300025125\|Ga0209644_1036139	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1109	Open in IMG/M
3300025125\|Ga0209644_1053969	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	922	Open in IMG/M
3300025125\|Ga0209644_1083801	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	748	Open in IMG/M
3300025128\|Ga0208919_1021501	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2420	Open in IMG/M
3300025251\|Ga0208182_1000300	Not Available	38845	Open in IMG/M
3300025251\|Ga0208182_1001308	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	11873	Open in IMG/M
3300025251\|Ga0208182_1001886	All Organisms → cellular organisms → Bacteria	9149	Open in IMG/M
3300025251\|Ga0208182_1009921	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2726	Open in IMG/M
3300025251\|Ga0208182_1012812	All Organisms → Viruses → Predicted Viral	2280	Open in IMG/M
3300025251\|Ga0208182_1015048	All Organisms → Viruses → Predicted Viral	2031	Open in IMG/M
3300025251\|Ga0208182_1099082	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	525	Open in IMG/M
3300025264\|Ga0208029_1074154	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	658	Open in IMG/M
3300025264\|Ga0208029_1093300	Not Available	554	Open in IMG/M
3300025280\|Ga0208449_1064194	Not Available	944	Open in IMG/M
3300025282\|Ga0208030_1024919	Not Available	1916	Open in IMG/M
3300025282\|Ga0208030_1056956	Not Available	1089	Open in IMG/M
3300025282\|Ga0208030_1118928	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	648	Open in IMG/M
3300025296\|Ga0208316_1033198	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300025296\|Ga0208316_1037274	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1086	Open in IMG/M
3300025301\|Ga0208450_1034250	All Organisms → Viruses → Predicted Viral	1341	Open in IMG/M
3300026115\|Ga0208560_1001577	Not Available	1958	Open in IMG/M
3300028018\|Ga0256381_1000552	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4222	Open in IMG/M
3300028018\|Ga0256381_1004391	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2151	Open in IMG/M
3300028022\|Ga0256382_1001072	Not Available	3275	Open in IMG/M
3300028022\|Ga0256382_1014402	Not Available	1584	Open in IMG/M
3300028022\|Ga0256382_1099807	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	697	Open in IMG/M
3300028022\|Ga0256382_1145268	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	569	Open in IMG/M
3300028039\|Ga0256380_1000023	Not Available	20281	Open in IMG/M
3300028039\|Ga0256380_1000043	All Organisms → cellular organisms → Bacteria	14243	Open in IMG/M
3300028039\|Ga0256380_1001032	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	3412	Open in IMG/M
3300028039\|Ga0256380_1048418	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	649	Open in IMG/M
3300031800\|Ga0310122_10001512	All Organisms → cellular organisms → Bacteria	14781	Open in IMG/M
3300031804\|Ga0310124_10092442	All Organisms → Viruses → Predicted Viral	1876	Open in IMG/M
3300031804\|Ga0310124_10344774	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300031804\|Ga0310124_10570271	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	655	Open in IMG/M
3300032006\|Ga0310344_10000724	Not Available	25667	Open in IMG/M
3300032006\|Ga0310344_10000881	Not Available	23388	Open in IMG/M
3300032006\|Ga0310344_10134315	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	2080	Open in IMG/M
3300032006\|Ga0310344_10400238	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1178	Open in IMG/M
3300032006\|Ga0310344_11254833	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	613	Open in IMG/M
3300032145\|Ga0315304_1159091	Not Available	593	Open in IMG/M
3300032278\|Ga0310345_10007894	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	9134	Open in IMG/M
3300032278\|Ga0310345_10010819	Not Available	7708	Open in IMG/M
3300032820\|Ga0310342_100023496	All Organisms → cellular organisms → Bacteria	4793	Open in IMG/M
3300032820\|Ga0310342_101029724	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	967	Open in IMG/M
3300032820\|Ga0310342_103447730	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	522	Open in IMG/M
3300034654\|Ga0326741_000333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	12612	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	79.82%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.50%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	4.59%
Strait	Environmental → Aquatic → Marine → Strait	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	70.64%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.50%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.59%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	4.59%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	2.75%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.92%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	41.28%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	15.60%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	9.17%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	9.17%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	4.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	4.59%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.59%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.67%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	2.75%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.92%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	0.92%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.92%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume	0.92%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300003702	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial Assembly	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006315	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770m	Environmental	Open in IMG/M
3300006318	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0200m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006841	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_2_0200m	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental	Open in IMG/M
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental	Open in IMG/M
3300020477	Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300025042	Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025050	Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025296	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300026115	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)	Environmental	Open in IMG/M
3300028018	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600m	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028039	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300m	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031804	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032145	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_1000m_313 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25131J35506_10217422	3300002511	Marine	MKKWWKSRTFWLNIATLGVAQALQQDSPEQLAQILAVANVILRFFTHQPIGTSDQ*
JGI25136J39404_10124873	3300002760	Marine	MKAWWKSKTFWINLASLGVAAALDEPNGERMVQILAVANLILRFFTSQAIGVRDD*
JGI25136J39404_10592701	3300002760	Marine	MKRWYQSKTFWLNVITFGVASALEEPNPEILAQVLAVANIVLRFFTHQPIGTSDQ*
PicViral_100010263	3300003690	Marine, Hydrothermal Vent Plume	MKPWWKSKTFWVNIATLIVASAMDQPNPEMIAQGLAVVNIVLRFFTHQPIVAGHGTGDDTA*
PicViral_100233913	3300003690	Marine, Hydrothermal Vent Plume	MKAWWKSKTFWLNLATLGVASAVEQPNPAVIGQVLAVANILLRFFTSQGIGARDSS*
PicViral_10073746	3300003690	Marine, Hydrothermal Vent Plume	MKRWYQSKTFWLNVITFGVAAALEEPNPEILAQVLAVANIVLRFFTHQPIGTSDQ*
PicMicro_1000816518	3300003702	Marine, Hydrothermal Vent Plume	MKPWWKSKTFWVNIATLIVASAMDQPNPEMIAQGLAVVNIVLRFFTHQPIVAGHGTGDDTT*
Ga0068471_10484253	3300006310	Marine	MKPWWKSKTFWINIATGGVSLALQQDSPEQLASLLALVNLVLRFFTTEPIGR*
Ga0068487_10524271	3300006315	Marine	MKKWWKSKTFWLNIATLGVASAVEQPNPEAVAQVLAVANIILRFFTSQAIGNADG*
Ga0068475_10469612	3300006318	Marine	MKAWWKSKTFWLNIATLGVASAIEQPNPEVLGQALAVANIVLRFFTRTSIGASDG*
Ga0068475_10575826	3300006318	Marine	MKSWWKSKTFWLNIATLGVASALEQPNPEALAQGLAVANIILRFFTRTEIGR*
Ga0068475_11092023	3300006318	Marine	MKAWYKSKTFWLNVATFGVASALEQPNPETLAQVLAVANLVLRFFTTQPIGSHSDL*
Ga0068475_12294863	3300006318	Marine	YKSRTFWLNLAAVGVASALEEPNPSTMAQVLGVANIVLRFFSSEPIGNA*
Ga0068503_100170263	3300006340	Marine	MKVWWKSKTFWLNLATLGVASAIDQPNPVVVTQVLAVANVILRFLTNKPIGAHDDQ*
Ga0068503_101816613	3300006340	Marine	MKSWWKSKTFWINIATLGVASAMDQPSTPVVTQCLAVANIVLRFFTHTGIG
Ga0068493_100011262	3300006341	Marine	MKSWWKSKTFWINIATLGVASAMDQPSTPVVTQCLAVANIVLRFFTHTGIGSGNG*
Ga0098039_11249131	3300006753	Marine	MSKPWWKSRTFWLNIATGGVALALQQDSPEQLTQILAVANLVLRFFTSEPIGR*
Ga0068489_1046813	3300006841	Marine	MKKWWKSKTFWLNIATLGVASAVEQPNPEAVAQILAVANIVLRFFTSQAIGNADG*
Ga0098036_10298476	3300006929	Marine	MKAWWKSKTFWLNLATLGVASAVEQPNPEALGQVLAVANIVLRFF
Ga0098036_10605002	3300006929	Marine	MPGKRWWKSKTFWLNVATLGVASAVEQPNPEMLAQVLAVANIVLRFLTTQPVNNSD*
Ga0098036_12069142	3300006929	Marine	MKRWWKSKTFWLNLATLGVASALEEPNPEALAQGLAVANIILRFFTSQGVN*
Ga0110931_10652481	3300007963	Marine	MKAWWKSKTFWLNLATLGVASAVEQPNPAVIGQVLAVANIVLRFFTSQGIGARDAS*
Ga0114898_10018235	3300008216	Deep Ocean	MKRWWKSKTFWLNIATLGVASALEQPNPEVTAQILAVANIVLRFFTKEAIA*
Ga0114898_10019843	3300008216	Deep Ocean	MNPKKWWTSKTFWLNVATLGVAQAMQQDSPEQLSQLLAIANILLRFFTSQPLGR*
Ga0114898_10035286	3300008216	Deep Ocean	MKAWYKSKTFWLNLATLGVASALEQPNPETIAQLLAVANLILRFFTTQPIGARSDL*
Ga0114898_10304493	3300008216	Deep Ocean	MSKAWWKSRTFWLNIATGGVALALQQDSPEQLTQILAVANLVLRFFTSEPIGR*
Ga0114898_11500722	3300008216	Deep Ocean	MKAWWKSKTFWLNLATIGVSSALNEQNPETIAQVLGVVNLILRFFTSQPVGVRDD*
Ga0114899_10244956	3300008217	Deep Ocean	MKAWYKSKTFWLNLATLGVASALEEPNPETLAQLLAVANLILRFFTTHPIGVRSDL*
Ga0114899_10468743	3300008217	Deep Ocean	MKAWWKSKTFWLNLATLGVASAVEQPNPAALGQVLAVANIVLRFFTSQGIGARDAG*
Ga0114899_10542852	3300008217	Deep Ocean	MDPKKWWTSKTFWLNVATLGVAQAMQHDSPEQLAQLLAIANILLRFFTNQPLGR*
Ga0114899_10557783	3300008217	Deep Ocean	MKRWWKSKTFWLNLATLGVASAVEEPNPEIVGQCLAVANIILRFFTKQAIG*
Ga0114899_12061702	3300008217	Deep Ocean	MKAWWKSKTFWLNLATIGVSSALEEQNPATVAQVLGVVNLILRFFTSQSVGPRDGMI*
Ga0114899_12504712	3300008217	Deep Ocean	MKSWWKSKTFWLNLATLGVASAVEQPNPEALAQVLAVANIVLRFFTNSQLSS*
Ga0114904_100208716	3300008218	Deep Ocean	MKSWWKSKTFWLNLATLGVASAVEQPNPEALAQVLAVANIVLRFFTRTELSS*
Ga0114904_10045267	3300008218	Deep Ocean	MTRKPWYKSRTFWLNLAAVGVASALEEPNPSTMAQVLGVANIVLRFFTSDPIG*
Ga0114904_10129173	3300008218	Deep Ocean	MDPKKWWTSKTFWLNVATLGVAQAMQQDSPEQLAQLLAIANILLRFFSNQPLGR*
Ga0114904_10237525	3300008218	Deep Ocean	MERKSWWRSKTFWLNICSLGVAAALDEPNGETMAQALAVANLLLRFFTSQPLGR*
Ga0114904_10774692	3300008218	Deep Ocean	MTGKPWWKSKTFWLNIATLGVASAVEQPNPEALGQVLAVANIVLRFFTHQPLGGNSGT*
Ga0114905_10163654	3300008219	Deep Ocean	MKRWWKSKTFWLNIATLGVAQALQQDSPEQLAQILAVANVILRFFTHQPIGGSDGREA*
Ga0114910_10148343	3300008220	Deep Ocean	MKRWWKSKTFWLNMATLGVAQALQQDSPEQLAQILAVANVILRFFTHQPIGTGNDA*
Ga0114910_10626582	3300008220	Deep Ocean	MNPKKWWTSKTFWLNICSLGVAAALDEPNGETMAQALAVANLLLRFFTSQPLGR*
Ga0114903_10596291	3300009412	Deep Ocean	MDPKKWWTSKTFWLNVATLGVAQAMQQDSPEQLAQLLAIANILLRFFTKQPLGR*
Ga0114902_10957292	3300009413	Deep Ocean	MKPWWKSKTFWVNIATGGLSLALQQDSPEQLATLLALANLVLRFFTTEPIGR*
Ga0114902_11481331	3300009413	Deep Ocean	MKAWWKSKTFWLNLATLGVASAVEQPNPAALGQVLAVANIVLRFFTSQGI
Ga0114901_10899561	3300009604	Deep Ocean	MDPKKWWTSKTFWLNVATLGVAQAMQHDSPEQLAQLLAIANILLRFFTKQPLGR*
Ga0114901_11560181	3300009604	Deep Ocean	MKSWWKSKTCWLNLATLAVASAVEQPNPEALAQVLAVANIVLRFFTRTELS
Ga0114906_10161001	3300009605	Deep Ocean	WWKSRTFWLNIATGGVALALQQDSPEQLTQILAVANLVLRFFTSEPIGR*
Ga0114906_10446053	3300009605	Deep Ocean	PPSMSTKEDTMKAWYKSKTFWLNLATLGVASALEQPNPETIAQLLAVANLILRFFTTQPIGARSDL*
Ga0114906_12438061	3300009605	Deep Ocean	MAKSWWKSKTFWLNIATFGVASALEEPNPETLAQILAVANLVLRFFTTQPLSR*
Ga0114906_12604631	3300009605	Deep Ocean	MSKPWWKSRTFWLNIATGGVALALQQDSPEQLTQILAVANLVLR
Ga0114906_12698271	3300009605	Deep Ocean	SKTFWINIATGGLSLALQQDSPEQLATLLALANLVLRFFTTEPIGR*
Ga0181430_10431903	3300017772	Seawater	MKRWWKSKTFWLNLATLGVASAVEEPNPEIVGQCLAVANIILRFFTKQSIG
Ga0211637_101596821	3300020398	Marine	MKSWWKSKTFWLNIATLGVASAVEQPNPEALAQILAVANIVLRFFTRTEIGR
Ga0211637_103838402	3300020398	Marine	MKAWWKSKTFWLNLATLGVASAVEQPNPAVIGQVLAVANIVLRFFTNTAIGP
Ga0211670_101389221	3300020434	Marine	MKKWWKSRTFWLNIATLGVAQALQQDSPEQLAQILAVANVILRFFTHQPIGSGGGAEG
Ga0211585_1000093452	3300020477	Marine	MKAWWKSKTFWLNLATLGVASAVEQPNPEALGQVLAVANIVLRFFTHQPLGGGSSS
Ga0211585_1000504321	3300020477	Marine	MKAWWKSKTFWLNIATLGVASAIEQPNPEVLGQALAVANIVLRFFTRTSIGASDG
Ga0226832_102832261	3300021791	Hydrothermal Vent Fluids	MKRWWKSKTFWLNMATLGVAQAMQQDSPEQLAQILAVANVILRFFTHQPIGGSDGREA
Ga0207889_10130861	3300025042	Marine	MKKWWTSKTFWLNIATLGVASAMQENSPTQLAQVLAVANVILRFFTHQPIGRGNDSDE
Ga0207902_10354812	3300025046	Marine	MKAWWKSKTFWLNIATLGVASAVEQPNPEVLGQALAVANIVLRFFTRTSIGASDG
Ga0207892_10220542	3300025050	Marine	MKKWWTSKTFWLNIATLGVASAMQENSPTQLAQVLAVANVILRFFTHQPIGRGGDDSDE
Ga0209349_11673001	3300025112	Marine	MSKPWWKSRTFWLNVATGGVALALQQDSPEQLTQILAVANLVLRFFTSEPIGR
Ga0209644_10361392	3300025125	Marine	MKAWWKSKTFWINLASLGVAAALDEPNGERMVQILAVANLILRFFTSQAIGVRDD
Ga0209644_10539692	3300025125	Marine	MKKWWKSRTFWLNIATLGVAQALQQDSPEQLAQILAVANVILRFFTHQPIGTSDQ
Ga0209644_10838012	3300025125	Marine	MKAWWKSKTFWLNLATLGVASAVEQPNPAVIGQVLAVANIVLRFFTSQGIGARDAG
Ga0208919_10215014	3300025128	Marine	MPGKRWWKSKTFWLNVATLGVASAVEQPNPEMLAQVLAVANIVLRFLTTQPVNNSD
Ga0208182_100030024	3300025251	Deep Ocean	MNPKKWWTSKTFWLNVATLGVAQAMQQDSPEQLSQLLAIANILLRFFTSQPLGR
Ga0208182_100130815	3300025251	Deep Ocean	MKAWYKSKTFWLNLATLGVASALEQPNPETIAQLLAVANLILRFFTTQPIGARSDL
Ga0208182_10018867	3300025251	Deep Ocean	MTRKPWYKSRTFWLNLAAVGVASALEEPNPSTMAQVLGVANIVLRFFTSDPIG
Ga0208182_10099213	3300025251	Deep Ocean	MKSWWKSKTFWLNLATLGVASAVEQPNPEALAQVLAVANIVLRFFTRTELSS
Ga0208182_10128122	3300025251	Deep Ocean	MKRWWKSKTFWLNIATLGVASALEQPNPEVTAQILAVANIVLRFFTKEAIA
Ga0208182_10150483	3300025251	Deep Ocean	MKAWWKSKTFWLNLATIGVSSALNEQNPETIAQVLGVVNLILRFFTSQPVGVRDD
Ga0208182_10990822	3300025251	Deep Ocean	MSKAWWKSRTFWLNIATGGVALALQQDSPEQLTQILAVANLVLRFFTSEPIGR
Ga0208029_10741541	3300025264	Deep Ocean	SKPWWKSRTFWLNIATGGVALALQQDSPEQLTQILAVANLVLRFFTSEPIGR
Ga0208029_10933001	3300025264	Deep Ocean	KTFWVNIATGGLSLALQQDSPEQLATLLALANLVLRFFTTEPIGR
Ga0208449_10641942	3300025280	Deep Ocean	MKAWWKSKTFWLNLATLGVASAVEQPNPAALGQVLAVANIVLRFFTSQGIGARDAG
Ga0208030_10249193	3300025282	Deep Ocean	MKRWWKSKTFWLNIATLGVAQALQQDSPEQLAQILAVANVILRFFTHQPIGTGNDA
Ga0208030_10569562	3300025282	Deep Ocean	MKPWWKSKTFWVNIATGGLSLALQQDSPEQLATLLALANLVLRFFTTEPIGR
Ga0208030_11189281	3300025282	Deep Ocean	MKKWWKSKTFWLNIATLGVASAVEQPNPEAVAQILAVANIVLRFFTSQAIGNADG
Ga0208316_10331983	3300025296	Deep Ocean	MKAWYKSKTFWLNLATLGVASALEEPNPETLAQLLAVANLILRFFTTHPIGVRSDL
Ga0208316_10372744	3300025296	Deep Ocean	MERKSWWRSKTFWLNICSLGVAAALDEPNGETMAQALAVANLLLRFFTSQPLGR
Ga0208450_10342504	3300025301	Deep Ocean	MKRWWKSKTFWLNMATLGVAQALQQDSPEQLAQILAVANVILRFFTHQPIGTGNDA
Ga0208560_10015772	3300026115	Marine Oceanic	MTGKPWWKSKTFWLNIATLGVASAVEQPNPEALGQVLAVANIVLRFFTHQPLGGNSGT
Ga0256381_10005522	3300028018	Seawater	MKRWYQSKTFWLNVITFGVASALEEPNPEILAQVLAVANIVLRFFTHQPIGTSDQ
Ga0256381_10043912	3300028018	Seawater	MDPKKWWTSKTFWLNVATLGVAQAMQHDSPEQLSQLLAIANILLRFFTKQPLGR
Ga0256382_10010724	3300028022	Seawater	MKSWWKSKTFWMNIATFGVASAMEEPNAPAIAQVLAVANIILRFFSHSSVGFRSDD
Ga0256382_10144022	3300028022	Seawater	MNPKKWWTSKTFWLNVATLGVAQAMQHDSPEQLSQLLAIANILLRFFTSQPLGR
Ga0256382_10998072	3300028022	Seawater	MKKWWKSKTIWLNIATLGVASAVEQPNPEAVAQILAVANIVLRFFTSQAIGNADG
Ga0256382_11452682	3300028022	Seawater	MKAWWKSKTFWLNLATIGVSSALEEQNPATVAQVLGVVNLILRFFTSQSVGPRDGMI
Ga0256380_100002323	3300028039	Seawater	MKSWWKSKTFWLNIATLGVASALDQPSTPVVTQCLAVANIILRFITHQPIGGASS
Ga0256380_10000432	3300028039	Seawater	MKVWWKSKTFWLNLATLGVASAIDQPNPVVVTQVLAVANVILRFLTNKPIGAHDDQ
Ga0256380_10010324	3300028039	Seawater	MNPKKWWTSKTFWLNICSLGVAAALDEPNGETMAQALAVANLLLRFFTSQPLGR
Ga0256380_10484181	3300028039	Seawater	KKWWKSKTFWLNIATLGVASAVEQPNPEAVAQILAVANIVLRFFTSQAIGNADG
Ga0310122_100015121	3300031800	Marine	MKKWWTSRTFWLNIATLGVASAMQENSPAQLAQVLAVANVILRFFTHQPIGRGGDDGDE
Ga0310124_100924424	3300031804	Marine	MEPKRWWKSKTFWLNIATLGVASAVEQPNPEMLAQVLAVANIVLRFFTSRPLEG
Ga0310124_103447742	3300031804	Marine	MKSWWKSKTFWLNLATLGVASAVEQPNPEMLGQVLAVANIVLRFFTHQPLNRSLNS
Ga0310124_105702712	3300031804	Marine	MKAWWKSKTFWLNLATLGIASALDQPSTPVVTQALAVVNIVLRFITNKPIGNP
Ga0310344_1000072415	3300032006	Seawater	MKAWWKSKTFWLNLATLGIASAVEQPNPEAVAQVLAVANIILRFFTNTAVGPQDG
Ga0310344_1000088112	3300032006	Seawater	MKSWWKSKTFWLNIATLGVASALEQPNPEALAQGLAVANIILRFFTRTEIGR
Ga0310344_101343151	3300032006	Seawater	MKKWWKSKTFWLNIATLGVASAVEQPNPEAVAQVLAVANIILRFFTSQAIGNADG
Ga0310344_104002382	3300032006	Seawater	MKRWWKSKTFWLNLATLGVASAVEQPNPEVVGQCLAVANIILRFFTKQAIT
Ga0310344_112548331	3300032006	Seawater	MTSKPWYKSRTFWLNLAAVGVASALEEPNPSTMAQVLGVANIVLRFFTSEPIGNA
Ga0315304_11590912	3300032145	Marine	MKKWWTSKTFWLNIATLGVASAMQENSPTQLAQVLAVANVILRFFTHQPIGSGGDDGEA
Ga0310345_100078943	3300032278	Seawater	MKKWWKSKTFWLNVATLGVASAIEQPNPVVLTQVLSVANIILRFLTTKAVGNQET
Ga0310345_100108194	3300032278	Seawater	MKPWWKSKTFWINIATGGVSLALQQDSPEQLASLLALVNLVLRFFTTEPIGR
Ga0310342_1000234962	3300032820	Seawater	MGKRWWKSKTFWLNVATGGIALALEQDSPEQLTQILAAANLVLRFFTSQPLRG
Ga0310342_1010297244	3300032820	Seawater	MKSWWKSKTFWLNIATLGVASAVEQPNPEALAQVLAVANIVLRFFTSTQLSS
Ga0310342_1034477302	3300032820	Seawater	MKRWWKSKTFWLNMATLGVAQAMQQDSPEQLAQILAVANVILRFFTHQPIGNRTADGE
Ga0326741_000333_5968_6159	3300034654	Filtered Seawater	MSIKEDTMKAWYKSKTFWLNVATFGVATALEEPNPETLAQALAIANIILRFFTSQSIGTHDNP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089038

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences