Metagenome Family F088966

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088966
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	49 residues
Representative Sequence	DDVEAYNNYDEMPLFTDFPKKISVVEKNLPKDILPWERKGVKGKVVTAG
Number of Associated Samples	62
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.62 %
% of genes near scaffold ends (potentially truncated)	50.46 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.468 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (86.239 % of family members)
Environment Ontology (ENVO)	Unclassified (90.826 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (87.156 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.16% β-sheet: 0.00% Coil/Unstructured: 55.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13952	DUF4216	1.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
All Organisms	root	All Organisms	38.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
cellular organisms	root	All Organisms → cellular organisms	38.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	38.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	21.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	13.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	13.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	11.01 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	11.01 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	10.09 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	10.09 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	9.17 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.47 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	9.17 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005093\|Ga0062594_102249633	All Organisms → cellular organisms → Eukaryota	591	Open in IMG/M
3300005334\|Ga0068869_101728844	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	559	Open in IMG/M
3300005338\|Ga0068868_101736995	Not Available	588	Open in IMG/M
3300005354\|Ga0070675_101421954	Not Available	639	Open in IMG/M
3300006358\|Ga0068871_100744533	Not Available	900	Open in IMG/M
3300012021\|Ga0120192_10009284	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1418	Open in IMG/M
3300013297\|Ga0157378_11123143	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	823	Open in IMG/M
3300013297\|Ga0157378_11230370	Not Available	789	Open in IMG/M
3300013297\|Ga0157378_12607813	All Organisms → cellular organisms → Eukaryota	558	Open in IMG/M
3300014486\|Ga0182004_10219327	Not Available	636	Open in IMG/M
3300014486\|Ga0182004_10254097	Not Available	568	Open in IMG/M
3300014745\|Ga0157377_10908935	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	659	Open in IMG/M
3300014745\|Ga0157377_11630648	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	518	Open in IMG/M
3300015267\|Ga0182122_1020159	Not Available	714	Open in IMG/M
3300015268\|Ga0182154_1015642	All Organisms → cellular organisms → Eukaryota	766	Open in IMG/M
3300015268\|Ga0182154_1038944	Not Available	603	Open in IMG/M
3300015269\|Ga0182113_1045635	Not Available	633	Open in IMG/M
3300015274\|Ga0182188_1043432	Not Available	555	Open in IMG/M
3300015276\|Ga0182170_1070318	Not Available	518	Open in IMG/M
3300015279\|Ga0182174_1024892	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	718	Open in IMG/M
3300015279\|Ga0182174_1038482	Not Available	637	Open in IMG/M
3300015279\|Ga0182174_1066167	All Organisms → cellular organisms → Eukaryota	545	Open in IMG/M
3300015283\|Ga0182156_1055297	Not Available	579	Open in IMG/M
3300015283\|Ga0182156_1082601	All Organisms → cellular organisms → Eukaryota	512	Open in IMG/M
3300015285\|Ga0182186_1024636	Not Available	714	Open in IMG/M
3300015286\|Ga0182176_1063360	Not Available	554	Open in IMG/M
3300015286\|Ga0182176_1074784	Not Available	525	Open in IMG/M
3300015292\|Ga0182141_1041162	Not Available	642	Open in IMG/M
3300015292\|Ga0182141_1080108	Not Available	528	Open in IMG/M
3300015294\|Ga0182126_1082746	Not Available	526	Open in IMG/M
3300015295\|Ga0182175_1040551	Not Available	655	Open in IMG/M
3300015296\|Ga0182157_1095945	Not Available	514	Open in IMG/M
3300015298\|Ga0182106_1091289	Not Available	522	Open in IMG/M
3300015299\|Ga0182107_1073206	All Organisms → cellular organisms → Eukaryota	562	Open in IMG/M
3300015300\|Ga0182108_1082648	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	545	Open in IMG/M
3300015302\|Ga0182143_1016929	All Organisms → cellular organisms → Eukaryota	852	Open in IMG/M
3300015302\|Ga0182143_1053726	All Organisms → cellular organisms → Eukaryota	616	Open in IMG/M
3300015304\|Ga0182112_1015014	Not Available	884	Open in IMG/M
3300015304\|Ga0182112_1046907	Not Available	642	Open in IMG/M
3300015304\|Ga0182112_1105011	Not Available	503	Open in IMG/M
3300015308\|Ga0182142_1020066	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	844	Open in IMG/M
3300015308\|Ga0182142_1116104	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	501	Open in IMG/M
3300015313\|Ga0182164_1135303	Not Available	505	Open in IMG/M
3300015322\|Ga0182110_1074933	Not Available	591	Open in IMG/M
3300015322\|Ga0182110_1116619	Not Available	513	Open in IMG/M
3300015323\|Ga0182129_1091710	Not Available	541	Open in IMG/M
3300015342\|Ga0182109_1178945	Not Available	547	Open in IMG/M
3300015343\|Ga0182155_1134914	All Organisms → cellular organisms → Eukaryota	608	Open in IMG/M
3300015343\|Ga0182155_1178104	Not Available	549	Open in IMG/M
3300015343\|Ga0182155_1212534	Not Available	513	Open in IMG/M
3300015344\|Ga0182189_1011378	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	1393	Open in IMG/M
3300015344\|Ga0182189_1033135	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1002	Open in IMG/M
3300015344\|Ga0182189_1174347	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	558	Open in IMG/M
3300015345\|Ga0182111_1177020	Not Available	571	Open in IMG/M
3300015345\|Ga0182111_1181396	Not Available	565	Open in IMG/M
3300015345\|Ga0182111_1243895	Not Available	502	Open in IMG/M
3300015346\|Ga0182139_1080934	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	767	Open in IMG/M
3300015346\|Ga0182139_1233981	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	512	Open in IMG/M
3300015347\|Ga0182177_1139453	All Organisms → cellular organisms → Eukaryota	628	Open in IMG/M
3300015351\|Ga0182161_1220352	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	544	Open in IMG/M
3300015351\|Ga0182161_1261399	Not Available	507	Open in IMG/M
3300015355\|Ga0182159_1154514	Not Available	717	Open in IMG/M
3300015355\|Ga0182159_1174913	All Organisms → cellular organisms → Eukaryota	681	Open in IMG/M
3300015355\|Ga0182159_1193701	Not Available	652	Open in IMG/M
3300015355\|Ga0182159_1204312	Not Available	637	Open in IMG/M
3300015355\|Ga0182159_1282226	Not Available	553	Open in IMG/M
3300015355\|Ga0182159_1347485	Not Available	504	Open in IMG/M
3300017404\|Ga0182203_1122021	Not Available	555	Open in IMG/M
3300017404\|Ga0182203_1132210	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	540	Open in IMG/M
3300017407\|Ga0182220_1028795	Not Available	724	Open in IMG/M
3300017407\|Ga0182220_1033054	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	698	Open in IMG/M
3300017407\|Ga0182220_1069287	Not Available	572	Open in IMG/M
3300017409\|Ga0182204_1066131	Not Available	603	Open in IMG/M
3300017409\|Ga0182204_1075375	Not Available	580	Open in IMG/M
3300017409\|Ga0182204_1099169	All Organisms → cellular organisms → Eukaryota	533	Open in IMG/M
3300017410\|Ga0182207_1131927	Not Available	556	Open in IMG/M
3300017410\|Ga0182207_1160292	Not Available	519	Open in IMG/M
3300017411\|Ga0182208_1094573	Not Available	556	Open in IMG/M
3300017411\|Ga0182208_1115395	All Organisms → cellular organisms → Eukaryota	521	Open in IMG/M
3300017415\|Ga0182202_1054854	Not Available	677	Open in IMG/M
3300017417\|Ga0182230_1083726	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	579	Open in IMG/M
3300017420\|Ga0182228_1057880	All Organisms → cellular organisms → Eukaryota	675	Open in IMG/M
3300017420\|Ga0182228_1071231	All Organisms → cellular organisms → Eukaryota	624	Open in IMG/M
3300017420\|Ga0182228_1104557	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	543	Open in IMG/M
3300017424\|Ga0182219_1128963	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	516	Open in IMG/M
3300017425\|Ga0182224_1020059	All Organisms → cellular organisms → Eukaryota	961	Open in IMG/M
3300017425\|Ga0182224_1040426	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	782	Open in IMG/M
3300017425\|Ga0182224_1069081	Not Available	665	Open in IMG/M
3300017425\|Ga0182224_1154159	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	514	Open in IMG/M
3300017427\|Ga0182190_1025414	Not Available	940	Open in IMG/M
3300017427\|Ga0182190_1103956	Not Available	590	Open in IMG/M
3300017427\|Ga0182190_1145072	Not Available	526	Open in IMG/M
3300017433\|Ga0182206_1114376	Not Available	560	Open in IMG/M
3300017436\|Ga0182209_1054682	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	727	Open in IMG/M
3300017442\|Ga0182221_1086706	Not Available	621	Open in IMG/M
3300017442\|Ga0182221_1091549	Not Available	611	Open in IMG/M
3300017442\|Ga0182221_1145631	Not Available	528	Open in IMG/M
3300017443\|Ga0182193_1078579	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	689	Open in IMG/M
3300017443\|Ga0182193_1146784	Not Available	558	Open in IMG/M
3300017681\|Ga0182226_1114542	Not Available	514	Open in IMG/M
3300017682\|Ga0182229_1106551	Not Available	501	Open in IMG/M
3300017683\|Ga0182218_1059308	Not Available	674	Open in IMG/M
3300017683\|Ga0182218_1133647	Not Available	525	Open in IMG/M
3300017684\|Ga0182225_1131771	Not Available	517	Open in IMG/M
3300017685\|Ga0182227_1105576	Not Available	553	Open in IMG/M
3300017685\|Ga0182227_1132124	All Organisms → cellular organisms → Eukaryota	508	Open in IMG/M
3300017686\|Ga0182205_1070508	All Organisms → cellular organisms → Eukaryota	677	Open in IMG/M
3300017690\|Ga0182223_1093563	Not Available	545	Open in IMG/M
3300025926\|Ga0207659_10810227	Not Available	804	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	98.17%
Environmental	Environmental	1.83%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	98.17%
Terrestrial	Environmental → Terrestrial	1.83%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	87.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.42%
Roots	Host-Associated → Plants → Roots	2.75%
Soil	Environmental → Terrestrial → Soil	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	87.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	87.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	86.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015313	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017681	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062594_1022496331	3300005093	Soil	VDDVEAYNNYDEMPLFIDFPKKISVVEKNLPKDILLWERKGVKGKVVTAG*
Ga0068869_1017288441	3300005334	Miscanthus Rhizosphere	DVEAYNNYDEMPLFTDFPKKISVVEKNLPKDILPWERKGVKGKVVTTG*
Ga0068868_1017369951	3300005338	Miscanthus Rhizosphere	AYNNYDEMPLFINFPKKISVVEKNLPKDILPWERKGVKEKVVTAG*
Ga0070675_1014219541	3300005354	Miscanthus Rhizosphere	IRVDGVDDVEAYNKCDEMPLFTDFCKKIEAVEKNLPKDVLPWERKGVKGKVITVG*
Ga0068871_1007445332	3300006358	Miscanthus Rhizosphere	HIIGVDGVDDVEAYNKCDEMPLFIDFCKKIEAVEKNLPKDILPWERKGVKRKVVMVG*
Ga0120192_100092842	3300012021	Terrestrial	VDDVEAYNNYKEMALFTDFCKKINVVEKNLPKDIMPWERKGVKGKVVTAG*
Ga0157378_111231432	3300013297	Miscanthus Rhizosphere	VDDVEAYNNYDEMPLFTDFPKKISVVEKNLSKDIMPREQKGVKGKVVTAD*
Ga0157378_112303701	3300013297	Miscanthus Rhizosphere	DDVEAYNNYDEMPLFADFLKKISVVEKNLPKDILLCERKCVKGKVVIAG*
Ga0157378_126078131	3300013297	Miscanthus Rhizosphere	VDDVEAYNNYDEMPLFTDFTKKISVVEKNLSKDILPWERKGVKGKVVTMG*
Ga0182004_102193271	3300014486	Root	HLFSDFSRKISVVERNLPKNIMPWERKGGKAKFVTAGPS*
Ga0182004_102540971	3300014486	Root	KCDQMPLFTDFINKIGDVEKNLPKDVLPWERKGVKWKTVTAADTNK*
Ga0157377_109089351	3300014745	Miscanthus Rhizosphere	VNDVEAYNNYDKMPLFTDFPKKISVVEKNIPKDIMPWERKGVNGKVVTAG*
Ga0157377_116306482	3300014745	Miscanthus Rhizosphere	VDDVEAYNNYDEMPLFTDFPKKISVVEKNLPKDILPYKRKGVKKKVVTAG*
Ga0182122_10201591	3300015267	Miscanthus Phyllosphere	NKCDEMPLFTDFYKKIDAVEKNLPKDVLPWERKGVKGKVVTVG*
Ga0182154_10156421	3300015268	Miscanthus Phyllosphere	MDDVEAYNNYDEMLLFTDFPKRISVVEKNLSKDILPWEQKGVKGKVVTG*
Ga0182154_10389441	3300015268	Miscanthus Phyllosphere	DEMPLFTDFCKKIEAVEKNLPKDVLPWERKCVKGKVVTVG*
Ga0182113_10456352	3300015269	Miscanthus Phyllosphere	VDDVEAYNKCNEMPLFTDFYKKIEAVKKNLPKDVLPWKRKGVKGKVITVG*
Ga0182188_10434321	3300015274	Miscanthus Phyllosphere	NYDEMPLFTDFPKKISVVEKNLPKDILPWEQKGVKGKVVTTG*
Ga0182170_10703181	3300015276	Miscanthus Phyllosphere	VDDVEEYNNYAEMQLFIDVPKKISAVEKNLPRDILPWEQKGVKGKVVTG*
Ga0182174_10248921	3300015279	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFTDFPKKISVVEKNLPKDIMPWERKGVKGKVVTAG*
Ga0182174_10384822	3300015279	Miscanthus Phyllosphere	VDDVEAYNKCNEMPLFTDFYKKIEAVKKNLPKDVLPWKRKGVKGKIITVG*
Ga0182174_10661671	3300015279	Miscanthus Phyllosphere	MDDVDEYNSYVEMQLFIDFPKKISVVEKNLPKDILPWERKSVKGKVVTAG*
Ga0182156_10552971	3300015283	Miscanthus Phyllosphere	VDDVEAYNNYDEISLFIDFPKKISIVKKNLPKDILLCERKCVKEKVVTVD*
Ga0182156_10826011	3300015283	Miscanthus Phyllosphere	VDDVEAYNNYDEISLFIDFSKKISVVEKNLPEDILPWERKGVKEKVVIAC*
Ga0182186_10246362	3300015285	Miscanthus Phyllosphere	VDDVEAYNKCDEMPLFIDFCKKIEGVEKNLPKDVLPWERKGVKGKVVTVG*
Ga0182176_10633602	3300015286	Miscanthus Phyllosphere	VDDVEAYNKCNEMPLFTDFYKKIEAVKKNLPKDVLPWERKGVKGKVVMVG*
Ga0182176_10747841	3300015286	Miscanthus Phyllosphere	VDNVEAYNNYDEMPLFIDFSKKISVVKKNLPKDIMPWERKGVKGKVVTAG*
Ga0182141_10411621	3300015292	Miscanthus Phyllosphere	EAYNNYDEMPLFIDFPKKISVVEKNLPKDIMPWERKGVKGKVVTAG*
Ga0182141_10801081	3300015292	Miscanthus Phyllosphere	IRVDGVDDVEAYNNYDEMPLFIDFSKKIIVVEKNLSKDILPWERKGVNGKVVTVG*
Ga0182126_10827461	3300015294	Miscanthus Phyllosphere	NKCDEMSLFIDFCKKIEAVEKNLPKDVLLWERKGVKGKVVTVG*
Ga0182175_10405511	3300015295	Miscanthus Phyllosphere	IIGVDGVDDVEAYNKCNEMPLFTDFYKIEAVKKNLPKDVLPWERKCVKGKVITVG*
Ga0182157_10959451	3300015296	Miscanthus Phyllosphere	NYNEMSLFIDFPKKISVVEKNLPKDIMPWERKGVKGKVVIAG*
Ga0182106_10912891	3300015298	Miscanthus Phyllosphere	MDDIEEYNNYTKMQLFTDFPKKIEAVEKNLPKDILPWERKGAKGKVVTG*
Ga0182107_10732061	3300015299	Miscanthus Phyllosphere	MDDVDEYNNYAKMQLFTNFLKISIVKKNLPKDILPWERKCVKGKVVTAG*
Ga0182108_10826481	3300015300	Miscanthus Phyllosphere	IGVDGVYDVEAYNNYDEIPLFTDFPKKIGVVEKNLPKDILPWERKGVKGKVVTAG*
Ga0182143_10169292	3300015302	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFTDFPKKFSVVKKNLPKDILPWEQKGVKEKVVTVG*
Ga0182143_10537262	3300015302	Miscanthus Phyllosphere	VDDIDEYNNYAKMHLFIDFPKKISVVEKNLSKNILPWEQKCVKG
Ga0182112_10150141	3300015304	Miscanthus Phyllosphere	VDGYNNNNYQEMELSVDFPKKISAIEKKLPKDKLPWERKDAKGKTVSG*
Ga0182112_10469071	3300015304	Miscanthus Phyllosphere	DGVDDVEAYNKCDEMPLFTDFCKKIEAMEKNLSKDVLLWERKCVNGKVVTVG*
Ga0182112_11050112	3300015304	Miscanthus Phyllosphere	VDGVDDVDEYNNYAEMHLFTNFPKKISVVEKNLPKDILPWERKCVKGKVVTAG*
Ga0182142_10200661	3300015308	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFTDFPKKISVVEKNLPKDILPWERKGVKREGKF*
Ga0182142_11161041	3300015308	Miscanthus Phyllosphere	VDDVDEYNNYAEMQLFTDFPKKISVVEKNLSKDILPWKRKGVKRKVVTSKLVVQH
Ga0182164_11353031	3300015313	Switchgrass Phyllosphere	YNNYDEMPLFTDFSKKISVMEKNLPKDILPWERKGVKRKVVTAG*
Ga0182110_10749332	3300015322	Miscanthus Phyllosphere	DDVEAYNKCNEMPLFTDFYKIEAVKKNLPKDVLPWERKCVKGKVVMVG*
Ga0182110_11166191	3300015322	Miscanthus Phyllosphere	EAYNNYDEMPLFTDFPKKISVVEKNLSKYILPWERNGVKRKVVTMGSLVVEHGLIL*
Ga0182129_10917101	3300015323	Miscanthus Phyllosphere	MDDVEAYNNYDEMLLFTDFPKKISVVEKNLSKDILSWERKGVKGKVVTAGKSVVERGVFV
Ga0182109_11789451	3300015342	Miscanthus Phyllosphere	VDDVEAYNNYDEILLFTDFPKKTSVVEKNLPKDILPWEQKGVKEKIITVG*
Ga0182155_11349141	3300015343	Miscanthus Phyllosphere	VDDVDEYNNYAKMQLFTDFPKKICVVKKNLPKDILPWERKGVKGKFVTAG*
Ga0182155_11781041	3300015343	Miscanthus Phyllosphere	NYDEMPLFTDFPKKISVVEKNLPKDIMPWERKCVKGKVVIAG*
Ga0182155_12125341	3300015343	Miscanthus Phyllosphere	VEAYNKCDEMPLFTNFCKKIEAVEKNLPKDVLPWKRKGVKRKIVTVG*
Ga0182189_10113782	3300015344	Miscanthus Phyllosphere	VDAVGAYNDYAEMPLFTDFSNKISAVERNLPKDILPWERKGGKGKVVSAGPS*
Ga0182189_10331351	3300015344	Miscanthus Phyllosphere	RVDGVDDVEAYNNYDEMPLFTDFPKKISVVEKNLPKDILPWERKGVKREGKF*
Ga0182189_11743471	3300015344	Miscanthus Phyllosphere	MDDVEAYNNYDEMPLFIDFPKKISVVEKNLPKDILPGERKGVKGKVVTAGKLVVERGVFV
Ga0182111_11770201	3300015345	Miscanthus Phyllosphere	LPPENRVDGMDDVDEYNNYAKMQLFIDFPTKINVVEKSLPKDILPWERKCVKGKVVTG*
Ga0182111_11813961	3300015345	Miscanthus Phyllosphere	DDVEAYNNYDEMPLFIDFPKKISVVEKNLPKDILPWKRNGVKGKVVIAG*
Ga0182111_12438951	3300015345	Miscanthus Phyllosphere	VDDVEAYNNYDVMPLFIDFPNKIRVVEKNLPKDILPWERKGVKGKVVTAG*
Ga0182139_10809341	3300015346	Miscanthus Phyllosphere	VDDVEAYNNYYEMPLFSDFPKKISAVEKNLSKDILPWERKCVKGKVVTG*
Ga0182139_12339811	3300015346	Miscanthus Phyllosphere	VGDVEAYNNYDEMPLFIEFSKKISVMEKNLPKDILPCERKGVKGKVVTVG*
Ga0182177_11394531	3300015347	Miscanthus Phyllosphere	VDDIDEYDNYAETHLFTDFPKKISVVEKKLPKDILPWERKGVKRKVVTG*
Ga0182161_12203522	3300015351	Miscanthus Phyllosphere	DEMPLFTDFPKKISVVEKNLLKDILPWKRKGAKGKVVTTG*
Ga0182161_12613991	3300015351	Miscanthus Phyllosphere	AYNNYDEMPLFTYFSKKISVVEKNLPKDILPWEQKCVKEKVVTAG*
Ga0182159_11545142	3300015355	Miscanthus Phyllosphere	MDDVDEYDNYAEMHLFTDFPKKISVVEKNLPKDILPWERKCVKGKVVTG*
Ga0182159_11749131	3300015355	Miscanthus Phyllosphere	MDDVEAYNNYDEMPLFIDFPKKIGVVEKNLSKDILPWERKGVKGKVVTAG*
Ga0182159_11937011	3300015355	Miscanthus Phyllosphere	VDDVEEYNNYTEMHLFIDFPKKIEVVEEKNLPKDILQWVRKGVKGKVVTG*
Ga0182159_12043121	3300015355	Miscanthus Phyllosphere	QHIIGVDGVDDAEAYNNNDEMLLFIDFTKKISLVEKNLPKDIMPWERKGVKGKVVTAGPT
Ga0182159_12822261	3300015355	Miscanthus Phyllosphere	VDGVDDVEAYNNYDEMPLFIDFPKKISVVEKNLPKDIMPWERKGVKGKVVTAG*
Ga0182159_13474852	3300015355	Miscanthus Phyllosphere	AYNNYDEMPLFIDFPKKISVVEKNLSKDILPWERKGVKGKVERAS*
Ga0182203_11220211	3300017404	Miscanthus Phyllosphere	DVDEYNNFAEMQLFTDFPKKISAVENNLSKDILPWEQKCFKGKVVTD
Ga0182203_11322101	3300017404	Miscanthus Phyllosphere	DDVEAYNNYDEMPLFTDFPKKISVVEKNLPKDILPWERKGVKGKVVTAG
Ga0182220_10287951	3300017407	Miscanthus Phyllosphere	YNNYDEILLFTDFPKKISVVEKNLLKDILPWERKCVKGKVVTAG
Ga0182220_10330541	3300017407	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLYTDFPKKISVVKKNLPKDILPRERKCVKGKVVIAG
Ga0182220_10692871	3300017407	Miscanthus Phyllosphere	LFTDFPKKISVVEKNLPKDIMPWERKGVTGKVVTAG
Ga0182204_10661311	3300017409	Miscanthus Phyllosphere	VDNVEAYNNYNEMPLFIDFPKKISVVEKNLPKDILPWERKGVKGKVVIAG
Ga0182204_10753751	3300017409	Miscanthus Phyllosphere	VDDVEAYNKCDEMPLFTDFCKKIEAVEKNLPKDVLPWEQKGVKGKVVMVG
Ga0182204_10991692	3300017409	Miscanthus Phyllosphere	VDDVEAGNNYDEMPLFMDFSKKISVVEKNLPKDIMPWEGKGVKGKVVTAG
Ga0182207_11319272	3300017410	Miscanthus Phyllosphere	VDDVEAYNKCNEMPLFTDFYKKIEAVKKNLPKDVLPWKRKGVKWKVITVG
Ga0182207_11602921	3300017410	Miscanthus Phyllosphere	DGMDDVEAYNNYDEMPLFIDFPKKISVVEKNLPKDIMPWERKGVKGKVITAG
Ga0182208_10945732	3300017411	Miscanthus Phyllosphere	VDDVEAYNKCNEMPLFTDFYKKIEAVKKNLPKDVLPWKRKGVKGKVITVG
Ga0182208_11153951	3300017411	Miscanthus Phyllosphere	MDDVEAYNNYDEMPLFIDFPKKISVVEKNLPKDILPWEQKHVKGKVVTAGLL
Ga0182202_10548541	3300017415	Miscanthus Phyllosphere	VDDVDEYNNYAEMHLFTNFPKKISVVKKNISKDILPWERKGVKEKVVTAG
Ga0182230_10837261	3300017417	Miscanthus Phyllosphere	VDNIEAYNNYNKMPLFIDFPKKISVVEKNLPKDILPWKRKGVKGKVVTAG
Ga0182228_10578801	3300017420	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFIDFPKKISVVEKNLPKDILPWERKGVKGKVVTAG
Ga0182228_10712312	3300017420	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFIDFLKKISVVEKNLPKDILPWEQKGVQ
Ga0182228_11045571	3300017420	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFTDFHKKISVVEKNLPKDILPWERKCVKGKVVTAG
Ga0182219_11289632	3300017424	Miscanthus Phyllosphere	VDDVEAYNKCNEMPLFTDFCKKIEAVEKNLPKDVLPWERKGVKG
Ga0182224_10200592	3300017425	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFIDFSKKISVVEKNLPKDVLPWEQKGVNGKVIIAG
Ga0182224_10404261	3300017425	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFTDFPKKISVVEKNLSKDILSWERKGVKGKVVTAGKSVVERGVFV
Ga0182224_10690812	3300017425	Miscanthus Phyllosphere	VDDVEAYNNCDEMPLFTNFSKKINVVEKNLSKDILPWERKGVKGKVVTAG
Ga0182224_11541591	3300017425	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFIDFHKKISVVEKNLPKDILPWEQKGVKGKVVTVG
Ga0182190_10254141	3300017427	Miscanthus Phyllosphere	VDDVEAYNKCNKMPLFIDFYKKIDAVEKNLPKDVLPWERKGVKGKVVTVG
Ga0182190_11039561	3300017427	Miscanthus Phyllosphere	DDVDEYDNYAEMHLFTDFLKKISVLEKNLSKDILPWERKGVKGKVVTVG
Ga0182190_11450721	3300017427	Miscanthus Phyllosphere	MDNVDEYSNYVEMQLFTDFPKKISVVENNLPKDILPSERKDVKGKVVAG
Ga0182206_11143761	3300017433	Miscanthus Phyllosphere	PLFTDFPKKISVVEKNLPKDIMPWERKGVKGKVVTAG
Ga0182209_10546821	3300017436	Miscanthus Phyllosphere	VDDAEAYNNYDEMLLFTDFPKKISVVEKNLSKDILPWERKGVKGKVVTVS
Ga0182221_10867061	3300017442	Miscanthus Phyllosphere	VDGMDDVEAYNNYDEMSLFTDFPKKIRVVEKKLPKDILPWEQKGVKGKVIIVG
Ga0182221_10915492	3300017442	Miscanthus Phyllosphere	VEAYNKCNEMPLFIDFYKIEAVKKNLPKDVLPWKRKGIKGKVITVG
Ga0182221_11456311	3300017442	Miscanthus Phyllosphere	RVDGVDDVEAYNNYDEMPLFTDFSKKISVVKKNLPKDILPWERKGVKGKVVTAG
Ga0182193_10785792	3300017443	Miscanthus Phyllosphere	VDDVEAYNNYDEMPLFTDFPKKISVVEKNLSKDILSWERKGVKGKVVTAGKPVVERGVFV
Ga0182193_11467841	3300017443	Miscanthus Phyllosphere	MDDVEAYNNYDEMPLFTNFSKKISIVEKNLPKDILPWEXKGVKEKIVTAG
Ga0182226_11145421	3300017681	Miscanthus Phyllosphere	DVEAYNNYDEMPLFIDFPKKINVVEKNLPKDILPWEQKGVKGKVIIAG
Ga0182229_11065511	3300017682	Miscanthus Phyllosphere	YNNYDEMPLFTDFCKKIDVVEKNLPKDILPWERKCVNEKVVTG
Ga0182218_10593081	3300017683	Miscanthus Phyllosphere	DGVDDVEAYNKCNEMPLFTDFCKKIEAVEKNLPKDVLPWEQKGVKGKVVTG
Ga0182218_11336471	3300017683	Miscanthus Phyllosphere	VDDVEAYNNYDEIPLFTDFPKKVSVVEKNLLKDIFPWERKCVKGKVVTAG
Ga0182225_11317711	3300017684	Miscanthus Phyllosphere	RVDGVDDIDKYKNYVEVQLFTYFSKKISVVEKNLSKDILPWEQKGVKGKVITAG
Ga0182227_11055761	3300017685	Miscanthus Phyllosphere	VDDDEAYNNYDEILLFTDFPKKISVVKKNLPKDILLWERKGVKGKFVTAG
Ga0182227_11321241	3300017685	Miscanthus Phyllosphere	MDDVEEYNNYAKMQLFTDIPKKISAVEKNLPRDILPWEQKSVKGKVVMG
Ga0182205_10705081	3300017686	Miscanthus Phyllosphere	MDDVDEYNNYAEIQLFTNFPKKISVIEKNLPKDILPWKRKGVKGKVVTG
Ga0182223_10935631	3300017690	Miscanthus Phyllosphere	NYDEMPLFIDFPKKINAMKKNLPKNILPWEQKSVKGKVITAG
Ga0207659_108102271	3300025926	Miscanthus Rhizosphere	EELDDVEAYNKCDEMPLFTDFCKKIEAVEKNLPKDVLPWERKGVKGKVVTVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088966

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences