Metagenome / Metatranscriptome Family F088961

Basic Information
Family ID	F088961
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	43 residues
Representative Sequence	GRVGVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVALRS
Number of Associated Samples	94
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.48 %
% of genes near scaffold ends (potentially truncated)	86.24 %
% of genes from short scaffolds (< 2000 bps)	85.32 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (73.394 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.183 % of family members)
Environment Ontology (ENVO)	Unclassified (25.688 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.450 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.56% β-sheet: 0.00% Coil/Unstructured: 69.44%
Feature Viewer

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Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13701	DDE_Tnp_1_4	4.59
PF01695	IstB_IS21	1.83
PF01425	Amidase	0.92
PF04366	Ysc84	0.92
PF02687	FtsX	0.92
PF13242	Hydrolase_like	0.92
PF01610	DDE_Tnp_ISL3	0.92
PF01904	DUF72	0.92
PF07995	GSDH	0.92
PF02782	FGGY_C	0.92
PF01590	GAF	0.92
PF07224	Chlorophyllase	0.92
PF04932	Wzy_C	0.92
PF13189	Cytidylate_kin2	0.92
PF11295	DUF3096	0.92
PF14559	TPR_19	0.92
PF08388	GIIM	0.92
PF13620	CarboxypepD_reg	0.92
PF00665	rve	0.92
PF11149	DUF2924	0.92
PF07364	DUF1485	0.92
PF13565	HTH_32	0.92
PF00027	cNMP_binding	0.92
PF00805	Pentapeptide	0.92
PF13545	HTH_Crp_2	0.92
PF12390	Se-cys_synth_N	0.92
PF00583	Acetyltransf_1	0.92
PF05016	ParE_toxin	0.92
PF00873	ACR_tran	0.92
PF14690	zf-ISL3	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	1.83
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.92
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.92
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.92
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.92
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.92
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.92
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.92
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.92
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.92
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.92
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.39 %
Unclassified	root	N/A	26.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.20 %
Unclassified	root	N/A	26.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	19.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.83 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.92 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.75 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.83 %
Micropepsales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales	0.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.83 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.92 %
Micropepsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae	0.92 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.92 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Rhizomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium	0.92 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.92 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.92 %
Syntrophomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae	0.92 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.92 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.92 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Terriglobus tenax	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus tenax	0.92 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.92 %
unclassified Rhizomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium	0.92 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.92 %
unclassified Syntrophomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae	0.92 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.92 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Rhizomicrobium sp. SCGC AG-212-E05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	0.92 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.92 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.92 %
Melittangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Melittangium	0.92 %
Terriglobus tenax	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus tenax	0.92 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.92 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Melittangium boletus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Melittangium → Melittangium boletus	0.92 %
Rhizomicrobium sp. SCGC AG-212-E05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	0.92 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.92 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.92 %
Terriglobus tenax	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus tenax	0.92 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.92 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19.27 %
Melittangium boletus DSM 14713	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Melittangium → Melittangium boletus → Melittangium boletus DSM 14713	0.92 %
Rhizomicrobium sp. SCGC AG-212-E05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	0.92 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	0.92 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.92 %
Terriglobus tenax	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus tenax	0.92 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.92 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.92 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101EKD15	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300004091\|Ga0062387_101500017	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300004973\|Ga0072322_1206104	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300005187\|Ga0066675_11338133	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300005436\|Ga0070713_101274172	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300005446\|Ga0066686_10494188	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300005450\|Ga0066682_10789120	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005552\|Ga0066701_10221547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1165	Open in IMG/M
3300005764\|Ga0066903_106848649	Not Available	592	Open in IMG/M
3300006358\|Ga0068871_101142363	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	729	Open in IMG/M
3300006893\|Ga0073928_10881993	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009038\|Ga0099829_11726088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	514	Open in IMG/M
3300009089\|Ga0099828_11412552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300009137\|Ga0066709_104565437	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300009524\|Ga0116225_1059361	All Organisms → cellular organisms → Bacteria → Acidobacteria	1823	Open in IMG/M
3300009548\|Ga0116107_1088530	Not Available	944	Open in IMG/M
3300009641\|Ga0116120_1278300	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300009643\|Ga0116110_1229153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300009662\|Ga0105856_1302288	Not Available	535	Open in IMG/M
3300009672\|Ga0116215_1331693	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300010303\|Ga0134082_10121341	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300010339\|Ga0074046_10039325	All Organisms → cellular organisms → Bacteria → Proteobacteria	3185	Open in IMG/M
3300010341\|Ga0074045_10093974	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300010359\|Ga0126376_11144569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300010361\|Ga0126378_12607669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300010366\|Ga0126379_10786431	Not Available	1050	Open in IMG/M
3300010366\|Ga0126379_13365779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010376\|Ga0126381_102676566	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300010376\|Ga0126381_105007939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300011271\|Ga0137393_10982727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300012157\|Ga0137353_1088520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Melittangium → Melittangium boletus → Melittangium boletus DSM 14713	577	Open in IMG/M
3300012189\|Ga0137388_11396873	Not Available	639	Open in IMG/M
3300012199\|Ga0137383_10229852	All Organisms → cellular organisms → Bacteria → Acidobacteria	1359	Open in IMG/M
3300012199\|Ga0137383_10310761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1154	Open in IMG/M
3300012199\|Ga0137383_11022735	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300012202\|Ga0137363_10456104	Not Available	1070	Open in IMG/M
3300012205\|Ga0137362_11041480	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012357\|Ga0137384_10103606	Not Available	2375	Open in IMG/M
3300012359\|Ga0137385_10989973	Not Available	694	Open in IMG/M
3300012362\|Ga0137361_11537084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012363\|Ga0137390_10299532	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300012469\|Ga0150984_103872313	Not Available	666	Open in IMG/M
3300012918\|Ga0137396_10192124	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300012925\|Ga0137419_11065059	Not Available	672	Open in IMG/M
3300012927\|Ga0137416_10554118	Not Available	996	Open in IMG/M
3300012930\|Ga0137407_11945515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300012939\|Ga0162650_100060418	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300013297\|Ga0157378_11300046	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300014150\|Ga0134081_10408288	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300014162\|Ga0181538_10461443	Not Available	672	Open in IMG/M
3300014164\|Ga0181532_10081143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2056	Open in IMG/M
3300014495\|Ga0182015_10095144	Not Available	2074	Open in IMG/M
3300014495\|Ga0182015_10671441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300014501\|Ga0182024_11872394	Not Available	668	Open in IMG/M
3300014638\|Ga0181536_10381913	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	634	Open in IMG/M
3300014638\|Ga0181536_10409098	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300016270\|Ga0182036_11580067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	552	Open in IMG/M
3300016294\|Ga0182041_10151558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1790	Open in IMG/M
3300016294\|Ga0182041_12076319	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300016371\|Ga0182034_11297596	Not Available	635	Open in IMG/M
3300016371\|Ga0182034_11422111	Not Available	606	Open in IMG/M
3300016387\|Ga0182040_11545385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300016404\|Ga0182037_11877514	Not Available	536	Open in IMG/M
3300016750\|Ga0181505_10437505	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300017928\|Ga0187806_1222025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300017938\|Ga0187854_10081006	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300017938\|Ga0187854_10307611	Not Available	676	Open in IMG/M
3300017955\|Ga0187817_11003752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	535	Open in IMG/M
3300018012\|Ga0187810_10407060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300018012\|Ga0187810_10516215	Not Available	511	Open in IMG/M
3300018016\|Ga0187880_1407125	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300018022\|Ga0187864_10434926	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300018040\|Ga0187862_10070316	All Organisms → cellular organisms → Bacteria → PVC group	2488	Open in IMG/M
3300018057\|Ga0187858_10367578	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300018482\|Ga0066669_10215515	Not Available	1485	Open in IMG/M
3300019082\|Ga0187852_1022993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus tenax	3094	Open in IMG/M
3300019082\|Ga0187852_1204304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300020199\|Ga0179592_10337910	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300020603\|Ga0194126_10411104	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300021168\|Ga0210406_11382770	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300021478\|Ga0210402_10880290	Not Available	822	Open in IMG/M
3300021560\|Ga0126371_10231863	Not Available	1954	Open in IMG/M
3300021560\|Ga0126371_12064349	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300021560\|Ga0126371_12401111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	638	Open in IMG/M
3300022711\|Ga0242674_1045208	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300025928\|Ga0207700_10704193	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300025936\|Ga0207670_11421237	Not Available	589	Open in IMG/M
3300026557\|Ga0179587_10151597	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300027879\|Ga0209169_10207884	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300027910\|Ga0209583_10019714	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300028536\|Ga0137415_10116933	All Organisms → cellular organisms → Bacteria → Acidobacteria	2513	Open in IMG/M
3300028536\|Ga0137415_10192964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1858	Open in IMG/M
3300030707\|Ga0310038_10185086	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300031057\|Ga0170834_110077034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300031576\|Ga0247727_10113453	All Organisms → cellular organisms → Bacteria	2774	Open in IMG/M
3300031716\|Ga0310813_11466774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300031753\|Ga0307477_10376660	Not Available	974	Open in IMG/M
3300031768\|Ga0318509_10134641	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300031770\|Ga0318521_11029085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300031771\|Ga0318546_11285351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300031941\|Ga0310912_10787246	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300032180\|Ga0307471_102319734	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300032783\|Ga0335079_11552037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300033402\|Ga0326728_10171914	Not Available	2272	Open in IMG/M
3300033419\|Ga0316601_100047115	All Organisms → cellular organisms → Bacteria	3160	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.39%
Aquatic	Environmental → Aquatic	23.85%
Plants	Host-Associated → Plants	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.64%
Freshwater	Environmental → Aquatic → Freshwater	21.10%
Sediment	Environmental → Aquatic → Sediment	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.92%
Peat	Environmental → Terrestrial → Peat	0.92%
Cave	Environmental → Terrestrial → Cave	0.92%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.92%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	4.59%
Lake	Environmental → Aquatic → Freshwater → Lake	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.18%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.92%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020603	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150m	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088961

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_04138660	2189573001	Grass Soil	FLFLAAKIWSHAGRVGVSYSDHYEEKGIFQRLMDRLRTISDGVNGFAPVISRALRS
Ga0062387_1015000171	3300004091	Bog Forest Soil	GVSYSDHYEEKGIFQRLMDRLRTISDAAKGFAPVISRALRC*
Ga0072322_12061043	3300004973	Peatlands Soil	SYSDHYAEQGIFQRLMQRLRAIAVGPKGYLPVLAVALRF*
Ga0066675_113381332	3300005187	Soil	HGGRVGVSYSDHYAEQGIFQRLMQRLRAIALGPHGYVSVVAVALRS*
Ga0070713_1012741722	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VGVSYSDHYEEKGVFRRLLDRLRAIVLDGKRFGPVLATPLTG*
Ga0066686_104941882	3300005446	Soil	GVSYSDHYEERGIFQRLMDRLRAIAACGPRFGPVVAAALT*
Ga0066682_107891201	3300005450	Soil	GRVGVSYSDHYAEQGIQRLMQRLRAIAVGPKGYVAVVAVALRS*
Ga0066701_102215472	3300005552	Soil	VGVSYSDHYPEQGIFQRLMDRLRAITVGKKGFVPVLTEPLRC*
Ga0066903_1068486491	3300005764	Tropical Forest Soil	SYSDHYAEQGIFRRLMDRLRAIAADGPNFVPVLPTALTG*
Ga0068871_1011423632	3300006358	Miscanthus Rhizosphere	SYSDHYEEKGIFGRLLDRLRAIAPDGQRFGPVLAMPLTG*
Ga0073928_108819932	3300006893	Iron-Sulfur Acid Spring	IWRHAGRVGVSYSDHYQEKGIFGRLLDRLRAIAPDGQRFGPVLATPLTG*
Ga0099829_117260881	3300009038	Vadose Zone Soil	DHYEERGIFQRLMDRLRAIAACGPRFGPVVAAALT*
Ga0099828_114125522	3300009089	Vadose Zone Soil	VGVSYSDHYPERGLFQRLMDRLRAITVGEKGFVPVLALALRC*
Ga0066709_1045654372	3300009137	Grasslands Soil	TGVSYSDHYEERGIFQRLMDRLRAIAACGPRFGPVVAAALT*
Ga0116225_10593611	3300009524	Peatlands Soil	SDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAAALRF*
Ga0116107_10885301	3300009548	Peatland	HYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVALRS*
Ga0116120_12783001	3300009641	Peatland	GRVGVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVALRS*
Ga0116110_12291532	3300009643	Peatland	VGVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAAALRY*
Ga0105856_13022882	3300009662	Permafrost Soil	GVSYSDHYAEQGIFRRLMDRLRSITPDGPRFGPVLATPLTG*
Ga0116215_13316931	3300009672	Peatlands Soil	DHYAEQGIFQRLMQRLRAIAVGPKGYLPVLAVALRF*
Ga0134082_101213413	3300010303	Grasslands Soil	LFLAAKIWSHGGRVGVSYSDHYEEKGIFQRLMDRLRSITDGANGFAPVVPTALRC*
Ga0074046_100393251	3300010339	Bog Forest Soil	GRVGVSYSDHYEEKGIFQRLMDRLRTITDGANGFAPVISRALRC*
Ga0074045_100939741	3300010341	Bog Forest Soil	SDHYEEKGIFQRLMDRLRTITDGANGFAPVISRALRC*
Ga0126376_111445692	3300010359	Tropical Forest Soil	AGRVGVSYSDHYTEQGLFQRLMDRLRAIALDGQRFRPVLATVLRE*
Ga0126378_126076691	3300010361	Tropical Forest Soil	WRHAGRVGVSYSDHYAEQGIFRRLMDRLRGIAADGRRFVPVLAAPLTC*
Ga0126379_107864311	3300010366	Tropical Forest Soil	SYSDHYAEQGIFQRLMDRLQAITREGPRFRPVLATALRE*
Ga0126379_133657791	3300010366	Tropical Forest Soil	RHAGRVGVSYSDHYAEQGLFRRLMDRLRAIATDGPRFRPVLANPLTG*
Ga0126381_1026765662	3300010376	Tropical Forest Soil	GRVGVSYSDHYAEQGIFRRLMDRLWAITSEGPPFRPVLAMALLE*
Ga0126381_1050079391	3300010376	Tropical Forest Soil	GGRVGLSYSDHYAEPGLFQRLMKRLRGIRCGEKGYAPVLAVALCC*
Ga0137393_109827272	3300011271	Vadose Zone Soil	VGVSYSDHYPERGIFQRLMDRLTAITVGEKGFVPVLTLALRC*
Ga0137353_10885202	3300012157	Soil	GVSYSDHYAEQGIFRRLMDRLRSIATDGQRFGPVVATALTG*
Ga0137388_113968731	3300012189	Vadose Zone Soil	YEEKGIFQRLMERLRAITDDDSRFAHVVLSALCC*
Ga0137383_102298521	3300012199	Vadose Zone Soil	SDHYEEKGIFQRLMDRLRSITDGANKFAPVVPTALRC*
Ga0137383_103107612	3300012199	Vadose Zone Soil	DHYEEKGIFQRLMDRLRSITDGANKFAPVVPTALRC*
Ga0137383_110227351	3300012199	Vadose Zone Soil	DTGAGWGVSYSDHYAERGIFQRLMERLRAITVSEKGYVQVLAVALRS*
Ga0137363_104561042	3300012202	Vadose Zone Soil	YSDHYAEQGIFRRLMERLRMIASDGPRFAPVLATALTG*
Ga0137362_110414802	3300012205	Vadose Zone Soil	SDHYEEKGIFQRLMDRLRAISKDGNGFAPVVPLALRC*
Ga0137384_101036062	3300012357	Vadose Zone Soil	VSYSDHYAERGIFQRLMERLRAITVSEKGYVQVLAVALRS*
Ga0137385_109899732	3300012359	Vadose Zone Soil	DHYAEQGIFQRLMNRLRRIVEGPQGFVPVIAVALRV*
Ga0137361_115370841	3300012362	Vadose Zone Soil	HAGRVGVSYSDHYPERGIFQRLMDRLRAITVGEKGFVPVLALALRC*
Ga0137390_102995324	3300012363	Vadose Zone Soil	FLAAKIWCHGGRVGVSYSDHYEEKGIFQRLMDRLRAITKGDNGFAPVVPLALRC*
Ga0150984_1038723133	3300012469	Avena Fatua Rhizosphere	VSYSDHYEEKGIFCRLLGRLRAIAQDAVGPFGPVLAMPLTG*
Ga0137396_101921241	3300012918	Vadose Zone Soil	AGRVGVSYSDHYAERGLFQRLMERLRSIAPGETNLRPVFATALRS*
Ga0137419_104941072	3300012925	Vadose Zone Soil	LFLAAKIWSHAGRVGISYSDHYEEKGIFQRLMDRLRTITDGANGFAPVISRALRC*
Ga0137419_110650591	3300012925	Vadose Zone Soil	GVSYSDHYPEKGFCSEMDRLRAITVGEKGFAPVLALRC*
Ga0137416_105541181	3300012927	Vadose Zone Soil	DHYEEKGIFQRLMERLRAITHDGSRFAPVVLSALRC*
Ga0137407_119455151	3300012930	Vadose Zone Soil	GRVGVSYSDHYEEKGIFHRLMDRLRAITKDDNGFAPVVPLALRC*
Ga0162650_1000604181	3300012939	Soil	RHAGRVGVSYSDHYPEQGIVQRLMNRLRAITVSKKGFVPVLAAPLRC*
Ga0134110_103013581	3300012975	Grasslands Soil	LRFLFLAAKIWSHGGRVGVSYSDHYEEKGIFQRLMDRLRSITDGANGFAPVVPTALRC*
(restricted) Ga0172364_100670173	3300013129	Sediment	VGDSYSDHYEEKGIFDRLMGRLRAIRPDGGSFTPVLETALRR*
Ga0157378_113000461	3300013297	Miscanthus Rhizosphere	RVGVSYSDHYEERGIFSRLLNRLRTIAPDGQRFGPVLATPLTG*
Ga0134081_104082882	3300014150	Grasslands Soil	RHGGRVGVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYVAVVAVALRS*
Ga0181538_104614432	3300014162	Bog	MLMAVSYSDHYAEQGILQRLMQRLRAIAVGPKGYAPVLAVALRS*
Ga0181532_100811431	3300014164	Bog	SHSGRVGVSYSDHYEEKGIFQRLMDRLRTITDGANGFAPVISRALRC*
Ga0182015_100951441	3300014495	Palsa	MGRVGVSYSDHYAEKGILERLMNRLRAIVEGPKGFAPVIAS
Ga0182015_106714411	3300014495	Palsa	YSDHYQEKGIFQRLMDRLRLITDGVNGFAPVVPTALRC*
Ga0182024_118723941	3300014501	Permafrost	GRVGVSYSDHYAEQGIFRRLMDRLRAITTDGQRFGPVLATALTG*
Ga0182021_131948541	3300014502	Fen	DHYEEKAIFDRLMRRVRAIAAGADGFTPVIATALRC*
Ga0181536_103819131	3300014638	Bog	VGISYSDHYAEQRVFRRLMERLRAIAVGSQGYVPVLSVALRC*
Ga0181536_104090981	3300014638	Bog	DHYAEQGIFQRLMQRLRAIGVGPQGYVPVLAVALRS*
Ga0182036_115800671	3300016270	Soil	SDHYAEQGIFRRLMDRLGAIAADGPNFVPVLPTALTG
Ga0182041_101515582	3300016294	Soil	GGRVGVSYSDPYAEPGLFQRLAERLRGITRGEKGYAPVLAVALRC
Ga0182041_120763191	3300016294	Soil	AGRVGVSYSDHYAERGLFQRLMDRLRAIAPGEMNFTPVLATPLRS
Ga0182034_112975961	3300016371	Soil	IWRYAGTVGVSYSDHYAEQGFFPRLDRLRAITCERERFPPVLATALREWE
Ga0182034_114221112	3300016371	Soil	VGVSYSDHYAEQGIFRRLMDRLRAIASAGQRFDPVLATPLRE
Ga0182040_115453852	3300016387	Soil	GRVGVSYSDHYAEQGVFCRLMLPLRAIARDGQRFGPVLATALTG
Ga0182037_118775142	3300016404	Soil	DHRRVGSEITVNYSDHYAEQGMFCRLMNRLRAITTDGPRFRPVLATPLTG
Ga0181505_104375051	3300016750	Peatland	VSYSDHYAEQGIFRRLMDRLRAITTDGQRFGPVLATALTG
Ga0187806_12220251	3300017928	Freshwater Sediment	GRVGVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVALRF
Ga0187854_100810063	3300017938	Peatland	RVGVSYSDHYQEKGTFQRLMDRLRAIAGGAHGFTPVVATALRC
Ga0187854_103076112	3300017938	Peatland	MLMAVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVALRS
Ga0187817_110037521	3300017955	Freshwater Sediment	WRHGGRVGVSYSDHYAEQGIFQRLMQRLRAIAVGAEGYAPVLAVALRF
Ga0187810_104070601	3300018012	Freshwater Sediment	VGVSYSDHYAERGIFQRLMERLRAIAVGPKGYLPVLGV
Ga0187810_105162151	3300018012	Freshwater Sediment	SDHYAEKGIFQRLMQRLRAIAVGPKGYAPVLAAALRF
Ga0187880_14071251	3300018016	Peatland	IWRHGGRVGVSYSDHYAEQGIFQRLMQRLRAIGVGPKGYVPVLAVALRS
Ga0187864_104349261	3300018022	Peatland	LRFLFLAAKIWCHAGRVGVSYSDHYEEKGIFQRLMDRLRSITDGVNGFAPVVPTALRC
Ga0187862_100703163	3300018040	Peatland	LMAVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVALRS
Ga0187858_103675782	3300018057	Peatland	VGVSYSDHYAEQGIFQRLMQRLRAIGVGPKGYVPVLAVALRS
Ga0066669_102155151	3300018482	Grasslands Soil	PTRLPFLFLAAKIWCYSGRVGVSYSDHYEEKGIFQRLMDRLRAITKEGNRFAPVVPLALR
Ga0187852_10229933	3300019082	Peatland	MLMAVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVDLRS
Ga0187852_12043042	3300019082	Peatland	WVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLAVALRF
Ga0179592_103379101	3300020199	Vadose Zone Soil	RFLFLSAKIWCHSGRVGVSYSDHYEEKGIFQRLMDRLRTIKKDDNGFVPVVPQALRC
Ga0194126_104111042	3300020603	Freshwater Lake	VRYSDHYEEKGLFERLMNRLRSIAAGASGFPPVIATALRC
Ga0210406_113827701	3300021168	Soil	VGVSYSDHYPERGIFQRFMDRLTAITVGEKGFVPVLALAL
Ga0210402_108802901	3300021478	Soil	RHAGRVGVSYSDHYEEKGIFSRLLDRLRAIAPEGQRFGPVLITPLTG
Ga0126371_102318632	3300021560	Tropical Forest Soil	VSYSDHYAEQGIFTRLMERLRAISFGERGFMPVIAVALRC
Ga0126371_120643491	3300021560	Tropical Forest Soil	VGVSYSDHYPEQGIFQRLMDRLRAITVGERGFMPVLAVPL
Ga0126371_124011112	3300021560	Tropical Forest Soil	IWRHAGRVGISYSDHYAEQGIFQRLMDRLRTITSEGPWFRPVLAVALRE
Ga0242674_10452082	3300022711	Soil	WSHAGRVGVSYSDHYEEKGIFQRLMDRLRVITDGVNGFAPVISLALRS
Ga0207700_107041931	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RHAGRVGVSYSDHYEEKGVFRRLLDRLRAIVLDGKRFGPVLATPLTG
Ga0207670_114212371	3300025936	Switchgrass Rhizosphere	VSYSNHYAEQGMFHRLMERLRMIASAGPRFAPVVATALSG
Ga0179587_101515972	3300026557	Vadose Zone Soil	DHYEEQGIFGRLMHRLRGITIHGQRFGPVLATALTG
Ga0209169_102078841	3300027879	Soil	DHYQEKSIFSRLLERLRAIAQNAVRPFGPVLATPLTG
Ga0209583_100197143	3300027910	Watersheds	SYSDHYAEQGIFRRLMERLRMIAGDGQSFAPVLATPLTG
Ga0137415_101169333	3300028536	Vadose Zone Soil	VSYSDHYEEKGIFQRLMDRLRTIKKNDNGFVPVVPQALRY
Ga0137415_101929641	3300028536	Vadose Zone Soil	VSYSDHYEEKGIFQRLMDRLRTIKKDDNGFVPVVPQALRC
Ga0310038_101850861	3300030707	Peatlands Soil	VGVSYRDHYAEQGIFQRLMQRLRAIAVGPKGYAPVLA
Ga0170834_1100770341	3300031057	Forest Soil	GRVGVSYSDHYPERGIFQRLMDRLRAITVGEKGFVPVLALALRC
Ga0247727_101134532	3300031576	Biofilm	MKRYAFPHSYSDHYPEKGIFQRLMERLRAITAGQEGFSPVVAVALTG
Ga0310813_114667742	3300031716	Soil	LRFLFVAAKVWRHAGRVGVSYSDHYAEQGIFCRLMDRLRAIAIDGHRFRLVLATALTG
Ga0307477_103766601	3300031753	Hardwood Forest Soil	VGVSYSDHYAEQGIFRRLMDRLRAIARQGQRFRPVLATALKE
Ga0318509_101346411	3300031768	Soil	RRSDHYREQGIFRRLMDRLRAFASDGQRFGPVPATALRE
Ga0318521_110290852	3300031770	Soil	RTVGVSYSDHYTEQGIFQRLMQRLRAIAVGPHGYVPVLAVALRS
Ga0318546_112853511	3300031771	Soil	GRHGGRVGVSYSDPYAEPGLFQRLVERLRGITRGEKGYAPVLAVALRC
Ga0310912_107872461	3300031941	Soil	HAGRVGISYSDHYAEQGMFRRLMDRLRAITSEGQRFRPVLATALRE
Ga0307471_1023197341	3300032180	Hardwood Forest Soil	AAKIWCHSGRVGVSYSDHYEEKGIFQRLMDRLRAITKDDDGFAPVVPLALRC
Ga0335079_115520371	3300032783	Soil	GGRVGVSYSDHYAEQGIFQRLMQRLRAIAVGPKGYGPVLGLALRC
Ga0326728_101719143	3300033402	Peat Soil	NDDYAEQGILQRLMQRLRAIAVGPKGYVPVLVVAQRS
Ga0316601_1000471151	3300033419	Soil	MEVSDHYQEQGIFQHLMDRLRAIVGGANGFRPVVATALRC

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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