NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088939

Metagenome / Metatranscriptome Family F088939

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088939
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 62 residues
Representative Sequence KKKKFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKKSIQIQGWGKARH
Number of Associated Samples 66
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 8.26 %
% of genes near scaffold ends (potentially truncated) 47.71 %
% of genes from short scaffolds (< 2000 bps) 85.32 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.229 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(64.220 % of family members)
Environment Ontology (ENVO) Unclassified
(74.312 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(82.569 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.94%    β-sheet: 12.70%    Coil/Unstructured: 79.37%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF00166Cpn10 5.50
PF136402OG-FeII_Oxy_3 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 5.50


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.23 %
All OrganismsrootAll Organisms24.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10003561Not Available8868Open in IMG/M
3300000116|DelMOSpr2010_c10251782All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium537Open in IMG/M
3300001748|JGI11772J19994_1017479All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300001748|JGI11772J19994_1043257All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300001934|GOS2267_103389All Organisms → cellular organisms → Bacteria → Proteobacteria1706Open in IMG/M
3300005215|Ga0069001_10029795Not Available1171Open in IMG/M
3300005346|Ga0074242_10139383All Organisms → cellular organisms → Bacteria → Proteobacteria1317Open in IMG/M
3300005346|Ga0074242_11855892Not Available1244Open in IMG/M
3300005512|Ga0074648_1026001Not Available3090Open in IMG/M
3300005613|Ga0074649_1004594Not Available12578Open in IMG/M
3300006025|Ga0075474_10156446Not Available714Open in IMG/M
3300006025|Ga0075474_10206779Not Available600Open in IMG/M
3300006025|Ga0075474_10209523All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium595Open in IMG/M
3300006025|Ga0075474_10212993All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium589Open in IMG/M
3300006026|Ga0075478_10156029Not Available710Open in IMG/M
3300006392|Ga0075507_1564377Not Available693Open in IMG/M
3300006400|Ga0075503_1064299Not Available540Open in IMG/M
3300006401|Ga0075506_1014850Not Available1309Open in IMG/M
3300006402|Ga0075511_1025282Not Available869Open in IMG/M
3300006403|Ga0075514_1065328Not Available1090Open in IMG/M
3300006403|Ga0075514_1086267Not Available564Open in IMG/M
3300006637|Ga0075461_10079527Not Available1042Open in IMG/M
3300006637|Ga0075461_10228599Not Available550Open in IMG/M
3300006802|Ga0070749_10024993Not Available3758Open in IMG/M
3300006802|Ga0070749_10329426Not Available851Open in IMG/M
3300006802|Ga0070749_10658021Not Available562Open in IMG/M
3300006810|Ga0070754_10395640Not Available605Open in IMG/M
3300006810|Ga0070754_10448109Not Available560Open in IMG/M
3300006810|Ga0070754_10507797Not Available518Open in IMG/M
3300006916|Ga0070750_10268646Not Available736Open in IMG/M
3300006916|Ga0070750_10376836Not Available595Open in IMG/M
3300006916|Ga0070750_10408774Not Available565Open in IMG/M
3300007236|Ga0075463_10161702Not Available722Open in IMG/M
3300007344|Ga0070745_1209846Not Available716Open in IMG/M
3300007344|Ga0070745_1277371Not Available601Open in IMG/M
3300007345|Ga0070752_1146826Not Available972Open in IMG/M
3300007345|Ga0070752_1330567Not Available575Open in IMG/M
3300007346|Ga0070753_1328245All Organisms → cellular organisms → Bacteria → Proteobacteria542Open in IMG/M
3300007538|Ga0099851_1149203Not Available871Open in IMG/M
3300007538|Ga0099851_1326385Not Available538Open in IMG/M
3300007539|Ga0099849_1182173Not Available798Open in IMG/M
3300007539|Ga0099849_1243695Not Available663Open in IMG/M
3300007539|Ga0099849_1276368Not Available611Open in IMG/M
3300007540|Ga0099847_1012452Not Available2806Open in IMG/M
3300007540|Ga0099847_1121706Not Available786Open in IMG/M
3300007540|Ga0099847_1134792Not Available740Open in IMG/M
3300007540|Ga0099847_1156735Not Available676Open in IMG/M
3300007540|Ga0099847_1219629Not Available551Open in IMG/M
3300007640|Ga0070751_1281353Not Available624Open in IMG/M
3300007640|Ga0070751_1318674Not Available576Open in IMG/M
3300007960|Ga0099850_1392587Not Available515Open in IMG/M
3300009027|Ga0102957_1313022All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium576Open in IMG/M
3300009529|Ga0114919_10289085Not Available1152Open in IMG/M
3300010297|Ga0129345_1062335Not Available1414Open in IMG/M
3300010299|Ga0129342_1033212Not Available2073Open in IMG/M
3300010299|Ga0129342_1208805Not Available691Open in IMG/M
3300010299|Ga0129342_1276765Not Available580Open in IMG/M
3300010299|Ga0129342_1280741Not Available575Open in IMG/M
3300010354|Ga0129333_10997562Not Available704Open in IMG/M
3300010368|Ga0129324_10270082Not Available674Open in IMG/M
3300017697|Ga0180120_10073342All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1515Open in IMG/M
3300017697|Ga0180120_10440993All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium508Open in IMG/M
3300017963|Ga0180437_10831121Not Available665Open in IMG/M
3300017967|Ga0181590_10961482Not Available559Open in IMG/M
3300017971|Ga0180438_10068016All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3231Open in IMG/M
3300017971|Ga0180438_10346589Not Available1134Open in IMG/M
3300017987|Ga0180431_10533626Not Available813Open in IMG/M
3300017987|Ga0180431_10597353Not Available757Open in IMG/M
3300017987|Ga0180431_10846574Not Available609Open in IMG/M
3300017989|Ga0180432_10761286Not Available675Open in IMG/M
3300018080|Ga0180433_10351169Not Available1149Open in IMG/M
3300018416|Ga0181553_10416564Not Available728Open in IMG/M
3300021957|Ga0222717_10264126Not Available995Open in IMG/M
3300021959|Ga0222716_10513873Not Available671Open in IMG/M
3300021960|Ga0222715_10150746Not Available1441Open in IMG/M
3300021960|Ga0222715_10647146All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon539Open in IMG/M
3300021960|Ga0222715_10666501Not Available528Open in IMG/M
3300021962|Ga0222713_10619332Not Available629Open in IMG/M
3300021964|Ga0222719_10038816Not Available3692Open in IMG/M
3300022053|Ga0212030_1038403Not Available673Open in IMG/M
3300022057|Ga0212025_1014263All Organisms → Viruses1230Open in IMG/M
3300022068|Ga0212021_1080263Not Available669Open in IMG/M
3300022068|Ga0212021_1121374Not Available535Open in IMG/M
3300022069|Ga0212026_1028182All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage816Open in IMG/M
3300022168|Ga0212027_1004928All Organisms → Viruses1781Open in IMG/M
3300022198|Ga0196905_1129437Not Available658Open in IMG/M
3300022200|Ga0196901_1005325All Organisms → Viruses5759Open in IMG/M
3300022200|Ga0196901_1265780Not Available527Open in IMG/M
3300023180|Ga0255768_10617040Not Available522Open in IMG/M
3300025543|Ga0208303_1000832All Organisms → Viruses12591Open in IMG/M
3300025610|Ga0208149_1021017All Organisms → Viruses1863Open in IMG/M
3300025610|Ga0208149_1109363All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium658Open in IMG/M
3300025630|Ga0208004_1144120Not Available521Open in IMG/M
3300025646|Ga0208161_1009468Not Available4146Open in IMG/M
3300025646|Ga0208161_1090740Not Available863Open in IMG/M
3300025646|Ga0208161_1121549All Organisms → Viruses689Open in IMG/M
3300025687|Ga0208019_1193201All Organisms → Viruses538Open in IMG/M
3300025759|Ga0208899_1001009All Organisms → Viruses20460Open in IMG/M
3300025759|Ga0208899_1004028All Organisms → Viruses9355Open in IMG/M
3300025759|Ga0208899_1008277All Organisms → Viruses6017Open in IMG/M
3300025803|Ga0208425_1041104Not Available1172Open in IMG/M
3300025810|Ga0208543_1112911Not Available645Open in IMG/M
3300025828|Ga0208547_1184641Not Available572Open in IMG/M
3300025840|Ga0208917_1232853Not Available599Open in IMG/M
3300025889|Ga0208644_1086943All Organisms → Viruses1581Open in IMG/M
3300025889|Ga0208644_1349743Not Available564Open in IMG/M
3300034418|Ga0348337_006820Not Available7236Open in IMG/M
3300034418|Ga0348337_009405All Organisms → Viruses5820Open in IMG/M
3300034418|Ga0348337_118676Not Available816Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous64.22%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient8.26%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment7.34%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.42%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.75%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment2.75%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment2.75%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.83%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.92%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.92%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300001934Estuary microbial communities from Chesapeake Bay, Maryland, USA - MOVE858EnvironmentalOpen in IMG/M
3300005215Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2EnvironmentalOpen in IMG/M
3300005346Saline sediment microbial community from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006392Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006400Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006401Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006403Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300017989Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022069Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_10003561183300000116MarineMKKSKKSFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTYGNPKGKKKSIQLKGWGKARH*
DelMOSpr2010_1025178213300000116MarineLIMNKKKSFPDLTGDGKVTRADVLKGRGVFSMGGPAEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
JGI11772J19994_101747953300001748Saline Water And SedimentNKKKSFPDLNKDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPKGKKKSIQIAGFGKARH*
JGI11772J19994_104325733300001748Saline Water And SedimentDGKITKADILKGRGVFAEGGPVEVKADNAVDEVGNPKGKKKPIQIQGWGKARH*
GOS2267_10338923300001934MarineMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKVDDSVDTVGNPKGKKKPIQIAGWGKARH*
Ga0069001_1002979553300005215Natural And Restored WetlandsMAKKFPDLTGDGKVTKADVLKGRGVFAHGGPVEVKADDSVDTVGNPKGKKINAQLTGWGKARH*
Ga0074242_1013938353300005346Saline Water And SedimentMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTYGNPKGKKKSIQLKGWGKARH*
Ga0074242_1185589253300005346Saline Water And SedimentENKMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDLVGNPKGKKKPIQIKGWGKARH*
Ga0074648_102600143300005512Saline Water And SedimentMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDLVGNPKGKKKPIQIKGWGKARH*
Ga0074649_1004594193300005613Saline Water And SedimentMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTVGNPKGKKKSIQIAGWGKARH*
Ga0075474_1015644613300006025AqueousFPDLNKDGKITKADILKGRGVFAEGGPVEVQADNAVDMVGNPKGKKKSIQLKGWGKARH*
Ga0075474_1020677923300006025AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDMVGNPKGKKKPIQIKGWGKARH*
Ga0075474_1020952333300006025AqueousMNKKKSFPDLTGDGKVTRADVLKGRGVFSIGGPAEVKADNAIDEVGNPKGKKQTIQIQGFGKARH*
Ga0075474_1021299323300006025AqueousMNKKKSFPDLTGDGKVTRADVLKGRGVFSMGGPAEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0075478_1015602933300006026AqueousMDKKKKSFPDLTGDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH*
Ga0075507_156437733300006392AqueousMNKKKKSFPDLTGDGKVTKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGK
Ga0075503_106429923300006400AqueousMDKKKKSFPDLTGDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH*
Ga0075506_101485013300006401AqueousGDGKVTKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH*
Ga0075511_102528243300006402AqueousMDKKKKSFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQTIQIQGFGKARH*
Ga0075514_106532843300006403AqueousMDKKKKSFPDLTGDGKITKADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH*
Ga0075514_108626723300006403AqueousMNKKKKSFPDLTGDGKVTKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH*
Ga0075461_1007952733300006637AqueousMDKKKKSFPDLTGDGKVTQADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH*
Ga0075461_1022859923300006637AqueousMDKKKKSFPDLTGDGKITKADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQ
Ga0070749_1002499353300006802AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKVDDAVDMVGNPKGKKKPIQIKGWGKARH*
Ga0070749_1032942623300006802AqueousMANKKFPDLTGDGKVTKADVLKGRGVFKDGGPVEVKADNAVDMVGNPKGKKKSIQIAGWGKARH*
Ga0070749_1065802113300006802AqueousDGKITKADILKGRGVFAEGGPVEVKADNAVDEVGNPKGKKKSIQIQGWGKARH*
Ga0070754_1039564013300006810AqueousKKFPDLTGDGKVTKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0070754_1044810913300006810AqueousKMAKKKFPDLTGDGKVTKADVLKGRGVFSMGGPVEVKVDDAVDMVGNPKGKKKSIQIAGWGKARH*
Ga0070754_1050779713300006810AqueousDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0070750_1026864623300006916AqueousMKKSKKSFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKVDDSVDTYGNPKGKKKSIQLKGWGKARH*
Ga0070750_1037683633300006916AqueousGDGKVTKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKKSIQIQGWGKARH*
Ga0070750_1040877433300006916AqueousGDGKVTKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0075463_1016170243300007236AqueousKKKKFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQTIQIQGFGKARH*
Ga0070745_120984633300007344AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTVGNPKGKKKSIQIAGWGKAR
Ga0070745_127737113300007344AqueousGDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH*
Ga0070752_114682613300007345AqueousKSFPDLNKDGKITKADILKGRGVFSMGGPVDVQADNAVDMVGNPKGEKQSIQIQGWGKARH*
Ga0070752_133056713300007345AqueousKVTKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0070753_132824513300007346AqueousKKFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0099851_114920333300007538AqueousMDKKKKSFPDLTGDGKVTQADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH*
Ga0099851_132638513300007538AqueousFPDLTGDGKVTKADVLKGRGVFAMGGPVDVKADDAVDMVGNPKGKKKSIQIQGWGKARH*
Ga0099849_118217323300007539AqueousMDKKKKSFPDLTGDGKVTKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH*
Ga0099849_124369513300007539AqueousKKKKFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0099849_127636823300007539AqueousKKKKFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKKSIQIQGWGKARH*
Ga0099847_101245253300007540AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFSMGGPVDVKADDAVDMVGNPKGKKKSIQIQGWGKARH*
Ga0099847_112170633300007540AqueousKDGKITKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKKSIQIQGWGKARH*
Ga0099847_113479233300007540AqueousMDKKKKSFPDLTGDGKVTQADILKGRGVFAMGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH*
Ga0099847_115673533300007540AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDMVGNPKGKKKSIQIAGWGKARH*
Ga0099847_121962923300007540AqueousKDGKITKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0070751_128135313300007640AqueousKKKKSFPDLTGDGKITKADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH*
Ga0070751_131867413300007640AqueousKITKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH*
Ga0099850_139258713300007960AqueousNKKKKFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQTIQIQGFGKARH*
Ga0102957_131302223300009027Pond WaterMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKVDDSVDTVGNPKGKKKSIQIAGRGKARH*
Ga0114919_1028908513300009529Deep SubsurfaceLNKDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH*
Ga0129345_106233543300010297Freshwater To Marine Saline GradientMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDLVGNPKGKKKPIQIKGWGKA
Ga0129342_103321263300010299Freshwater To Marine Saline GradientMAKKKFPDLTGDGKVTKADVLKGRGVFSMGGPVEVKVDDAVDMVGNPKGKKKSIQIAGWGKARH*
Ga0129342_120880543300010299Freshwater To Marine Saline GradientFPDLNKDGKITKADILKGRGVFSMGGPVDVQADNAVDMVGNPKGKKQSIQIQGWGKARH*
Ga0129342_127676533300010299Freshwater To Marine Saline GradientLTGDGKVTKADVLKGRGVFKDGGPVEVKADNAVDMVGNPKGKKKSIQIQGWGKARH*
Ga0129342_128074133300010299Freshwater To Marine Saline GradientLTGDGKVTKADVLKGRGVFKDGGPVEVKADNAVDMVGNPKGKKKSIQIAGWGKARH*
Ga0129333_1099756223300010354Freshwater To Marine Saline GradientMKKSKKSFPDLTGDGKVTKADVLKGRGVFSMGGPVEVKVDDSVDTVGNPKGKKKSIQIAGWGKARH*
Ga0129324_1027008213300010368Freshwater To Marine Saline GradientMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVDVKADDAVDMVGNPKGKKKSIQIQGWGKARH*
Ga0180120_1007334213300017697Freshwater To Marine Saline GradientMKKSKKSFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDLVGNPKGKKKPIQIKGWGKARH
Ga0180120_1044099313300017697Freshwater To Marine Saline GradientKMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTVGNPKGKKKSIQIAGWGKARH
Ga0180437_1083112133300017963Hypersaline Lake SedimentMKNKKKKSFPDLTGDGKVTKADVLKGRDVFAMGGPVEVKADDSVDTYGNPKGKKKSIQLKGWGKARH
Ga0181590_1096148213300017967Salt MarshAKKKFPDLTGDGKVTKADVLKGRGIFAMGGPVEVKADDSVDLVGNPKGKKKPIQIKGWGKARH
Ga0180438_1006801653300017971Hypersaline Lake SedimentMDKKKKSFPDLTGDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH
Ga0180438_1034658923300017971Hypersaline Lake SedimentMKKSKKSFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTYGNPKGKKKSIQLKGWGKARH
Ga0180431_1053362623300017987Hypersaline Lake SedimentMDKKKKSFPDLTGDGKVTQADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH
Ga0180431_1059735323300017987Hypersaline Lake SedimentMKNKKKKSFPDLTGDGKVTKADILKGRGVFAMGGPVEVKADDSVDMVGNPKGKKKSIQIAGWGKARH
Ga0180431_1084657413300017987Hypersaline Lake SedimentMDKKKKSFPDLTGDGKVTKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH
Ga0180432_1076128633300017989Hypersaline Lake SedimentMDKKKKSFPDLTGDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH
Ga0180433_1035116923300018080Hypersaline Lake SedimentMKNKKKKSFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTYGNPKGKKKSIQLKGWGKARH
Ga0181553_1041656423300018416Salt MarshMDKKKKSFPDLTGDGKITKADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQSIQIQGWGKARH
Ga0222717_1026412653300021957Estuarine WaterMAKKFPDLTGDGKVTKADVLKGRGVFAHGGPVEVKADDSVDTVGNPKGKKINAQLTGWGKARH
Ga0222716_1051387333300021959Estuarine WaterMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDLVGNPKGKKKPIQIKGWGKARH
Ga0222715_1015074643300021960Estuarine WaterMAKKKFPDLTGDGKVTKADVLKGRGVFSMGGPVEVKADDAVDMVGNPKGKKKSIQIAGWGKARH
Ga0222715_1064714643300021960Estuarine WaterPDLTGDGKVTKADVLKGRGVYAHGGPVEVKADDAVDMVGNPKGKKKSIQIQG
Ga0222715_1066650113300021960Estuarine WaterMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTYGNPKGKKKSIQLKGWGKARH
Ga0222713_1061933243300021962Estuarine WaterKNKKFPDLTGDGKVTKADVLKGRGVFADGGPVEVKADNAIDMIGNPKGKKKSIQIQGWGKARH
Ga0222719_1003881653300021964Estuarine WaterMKKSKKSFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKVDDSVDTYGNPKGKKKSIQLKGWGKARH
Ga0212030_103840323300022053AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTVGNPKGKKKSIQIAGWGKARH
Ga0212025_101426323300022057AqueousMDKKKKSFPDLTGDGKITKADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH
Ga0212021_108026313300022068AqueousNPDLTGDGKVTKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKKSIQIQGWGKARH
Ga0212021_112137423300022068AqueousKFPDLNKDGKITKADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH
Ga0212026_102818243300022069AqueousKKSFPDLTGDGKVTRADVLKGRGVFSIGGPAEVKADNAIDEVGNPKGKKQTIQIQGFGKARH
Ga0212027_100492873300022168AqueousMNKKKSFPDLTGDGKVTRADVLKGRGVFSMGGPAEVKADNAIDEVGNPKGKKQSIQIQGWGKARH
Ga0196905_112943723300022198AqueousMANKKFPDLTGDGKVTKADVLKGRGVFKDGGPVEVKADNAVDMVGNPKGKKKSIQIQGWGKARH
Ga0196901_100532523300022200AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKVDDSVDTVGNPKGKKKPIQIAGWGKARH
Ga0196901_126578033300022200AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVDVKADDAVDMVGNPKGKKKSIQIQGWGKARH
Ga0255768_1061704023300023180Salt MarshPDLNKDGKITKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH
Ga0208303_100083233300025543AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFSMGGPVDVKADDAVDMVGNPKGKKKSIQIQGWGKARH
Ga0208149_102101733300025610AqueousMNKKKKSFPDLTGDGKVTKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH
Ga0208149_110936323300025610AqueousMNKKKSFPDLTGDGKVTRADVLKGRGVFSIGGPAEVKADNAIDEVGNPKGKKQTIQIQGFGKARH
Ga0208004_114412013300025630AqueousGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKARH
Ga0208161_100946863300025646AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFSMGGPVEVKVDDSVDTVGNPKGKKKPIQIAGWGKARH
Ga0208161_109074013300025646AqueousSFPDLNKDGKITKADILKGRGVFSMGGPVDVQADNAVDMVGNPKGKKQSIQIQGWGKARH
Ga0208161_112154913300025646AqueousMANKKFPDLTGDGKVTKADVLKGRGVFKDGGPVEVKADNAVDMVGNPKGKKKSIQIAGWGKARH
Ga0208019_119320113300025687AqueousNKDGKITKADVLKGRGVFSMGGPVEVKVDDAVDMVGNPKGKKKSIQIAGWGKARH
Ga0208899_1001009323300025759AqueousKDGKITKADILKGRGVFAEGGPVEVKADNAVDEVGNPKGKKKSIQIQGWGKARH
Ga0208899_1004028163300025759AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKVDDAVDMVGNPKGKKKPIQIKGWGKARH
Ga0208899_100827753300025759AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFSMGGPVEVKVDDAVDMVGNPKGKKKSIQIAGWGKARH
Ga0208425_104110453300025803AqueousPDLTGDGKITKADILKGRGVFAMGGPVEVKADNAVDEVGNPNGKKQTIQIQGFGKARH
Ga0208543_111291113300025810AqueousKKKKFPDLTGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQTIQIQGFGKARH
Ga0208547_118464133300025828AqueousTGDGKVTKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH
Ga0208917_123285313300025840AqueousKFPDLTGDGKVTKADILKGRGVFAEGGPVEVKADNAIDEVGNPKGKKQSIQIQGWGKARH
Ga0208644_108694363300025889AqueousGDGKVTKADILKGRGVFAMGGPAEVKADNAIDEVGNPKGKKQSIQIQGWGKARH
Ga0208644_134974323300025889AqueousMDKKKKSFPDLTGDGKITKADILKGRGVFATGGPVEVKADNAVDEVGNPKGKKQTIQIQGFGKA
Ga0348337_006820_6916_71103300034418AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDMVGNPKGKKKPIQIKGWGKARH
Ga0348337_009405_5239_54333300034418AqueousMLKGKQKKLDKDGKITKADILKGRGVFSMGGPVDVQADNAVDMVGNPKGEKQSIQIQGWGKARH
Ga0348337_118676_213_4073300034418AqueousMAKKKFPDLTGDGKVTKADVLKGRGVFAMGGPVEVKADDSVDTVGNPKGKKKPIQIAGWGKARH


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