Metagenome / Metatranscriptome Family F088875

Overview

Basic Information

• Family ID: F088875
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 109
• Average Sequence Length: 43 residues
• Representative Sequence: MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWC
• Number of Associated Samples: 70
• Number of Associated Scaffolds: 109

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 51.38 %
• % of genes near scaffold ends (potentially truncated): 99.08 %
• % of genes from short scaffolds (< 2000 bps): 86.24 %
• Associated GOLD sequencing projects: 66
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (56.881 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (34.862 % of family members)
• Environment Ontology (ENVO): Unclassified (60.550 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (69.725 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 30.23%
  β-sheet: 0.00%
  Coil/Unstructured: 69.77%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF03406	Phage_fiber_2	3.67
PF16778	Phage_tail_APC	0.92
PF13884	Peptidase_S74	0.92
PF13385	Laminin_G_3	0.92
PF09636	XkdW	0.92

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
All Organisms	root	All Organisms	43.12 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Viruses	superkingdom	All Organisms → Viruses	37.61 %
cellular organisms	root	All Organisms → cellular organisms	5.50 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	36.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	36.70 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	36.70 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	36.70 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	36.70 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.88 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	36.70 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002408|B570J29032_109522141	All Organisms → cellular organisms → Bacteria	834
3300002835|B570J40625_100111771	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3305
3300002835|B570J40625_100396377	All Organisms → cellular organisms → Bacteria	1344
3300002835|B570J40625_100546408	Not Available	1075
3300002835|B570J40625_100600338	All Organisms → cellular organisms → Bacteria	1008
3300002835|B570J40625_100975868	Not Available	726
3300002835|B570J40625_101141528	All Organisms → cellular organisms → Bacteria	656
3300003497|JGI25925J51416_10056437	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1023
3300004054|Ga0063232_10086457	Not Available	869
3300004096|Ga0066177_10221264	Not Available	783
3300004096|Ga0066177_10517648	Not Available	529
3300004124|Ga0066178_10199363	Not Available	574
3300004126|Ga0066179_10031413	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1158
3300004126|Ga0066179_10039610	Not Available	1062
3300004126|Ga0066179_10133103	Not Available	662
3300004481|Ga0069718_15817475	Not Available	551
3300005517|Ga0070374_10040957	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2405
3300005527|Ga0068876_10366352	All Organisms → cellular organisms → Bacteria	808
3300005581|Ga0049081_10297391	Not Available	557
3300006484|Ga0070744_10148815	Not Available	672
3300007516|Ga0105050_10252950	Not Available	1087
3300007516|Ga0105050_10283859	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1014
3300007516|Ga0105050_10305756	Not Available	970
3300007523|Ga0105052_11030858	Not Available	510
3300007551|Ga0102881_1238827	Not Available	503
3300007722|Ga0105051_10422960	Not Available	993
3300007722|Ga0105051_10798979	Not Available	684
3300007722|Ga0105051_10999390	Not Available	599
3300008261|Ga0114336_1211722	Not Available	805
3300008267|Ga0114364_1006668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5698
3300008448|Ga0114876_1201029	Not Available	672
3300008448|Ga0114876_1230917	Not Available	594
3300008450|Ga0114880_1185653	Not Available	713
3300009159|Ga0114978_10331780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	924
3300009159|Ga0114978_10499761	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	714
3300009169|Ga0105097_10053948	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2167
3300009180|Ga0114979_10346555	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	876
3300009181|Ga0114969_10197921	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1235
3300009183|Ga0114974_10290512	Not Available	965
3300010885|Ga0133913_12469020	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1268
3300010965|Ga0138308_136112	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2159
3300012726|Ga0157597_1047798	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1702
3300013372|Ga0177922_10424444	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	984
3300013372|Ga0177922_10589788	Not Available	558
3300013372|Ga0177922_10839925	Not Available	750
3300013372|Ga0177922_11187974	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1386
3300017707|Ga0181363_1028618	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1059
3300017716|Ga0181350_1045846	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1172
3300017716|Ga0181350_1161112	Not Available	520
3300017722|Ga0181347_1066749	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1065
3300017722|Ga0181347_1143537	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	655
3300017774|Ga0181358_1072484	Not Available	1269
3300017774|Ga0181358_1083095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1167
3300017778|Ga0181349_1304974	Not Available	515
3300017778|Ga0181349_1307810	Not Available	512
3300017780|Ga0181346_1040094	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1919
3300017780|Ga0181346_1051452	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1666
3300017780|Ga0181346_1059043	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1540
3300017780|Ga0181346_1135673	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	932
3300017780|Ga0181346_1186924	Not Available	755
3300017784|Ga0181348_1064332	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1480
3300017784|Ga0181348_1256664	Not Available	602
3300017785|Ga0181355_1042034	All Organisms → Viruses → Predicted Viral	1956
3300017785|Ga0181355_1083371	Not Available	1334
3300017785|Ga0181355_1256005	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	670
3300017785|Ga0181355_1291623	Not Available	615
3300019784|Ga0181359_1107476	Not Available	1015
3300020172|Ga0211729_10124028	Not Available	638
3300020172|Ga0211729_11340296	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2277
3300020205|Ga0211731_10458240	Not Available	577
3300020205|Ga0211731_11351696	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3056
3300020556|Ga0208486_1033643	Not Available	768
3300022190|Ga0181354_1022848	Not Available	2001
3300022190|Ga0181354_1191059	Not Available	616
3300022407|Ga0181351_1042641	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1913
3300022407|Ga0181351_1073461	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1379
3300027621|Ga0208951_1134653	Not Available	653
3300027631|Ga0208133_1099348	Not Available	680
3300027707|Ga0209443_1244139	Not Available	616
3300027785|Ga0209246_10006809	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4223
3300027816|Ga0209990_10250142	Not Available	807
3300027969|Ga0209191_1062809	Not Available	1663
3300031746|Ga0315293_10169286	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1814
3300031772|Ga0315288_10416443	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1355
3300031951|Ga0315904_10047847	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4798
3300031997|Ga0315278_11771534	Not Available	585
3300031999|Ga0315274_10179642	Not Available	2649
3300031999|Ga0315274_10949813	Not Available	887
3300031999|Ga0315274_11278759	Not Available	718
3300031999|Ga0315274_11750609	Not Available	573
3300031999|Ga0315274_11991848	Not Available	522
3300032046|Ga0315289_10509133	Not Available	1154
3300032046|Ga0315289_10678153	Not Available	939
3300032046|Ga0315289_10769394	Not Available	855
3300032053|Ga0315284_11503440	Not Available	715
3300032164|Ga0315283_11555952	Not Available	675
3300032173|Ga0315268_11515185	Not Available	682
3300032401|Ga0315275_10525477	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1325
3300032516|Ga0315273_11814253	Not Available	733
3300033816|Ga0334980_0414670	Not Available	509
3300033993|Ga0334994_0045774	Not Available	2756
3300033996|Ga0334979_0553779	Not Available	616
3300034012|Ga0334986_0070455	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2159
3300034050|Ga0335023_0169758	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1233
3300034068|Ga0334990_0154823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1251
3300034092|Ga0335010_0056677	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2786
3300034101|Ga0335027_0080971	Not Available	2526
3300034104|Ga0335031_0788818	Not Available	533
3300034280|Ga0334997_0172789	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1430

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.25%
Marine	Environmental → Aquatic → Marine	2.75%

Type

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	44.04%
Lake	Environmental → Aquatic → Freshwater → Lake	44.04%
Ice	Environmental → Aquatic → Freshwater → Ice	6.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.92%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	38.53%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	29.36%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	14.68%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	6.42%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.92%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.92%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	34.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	14.68%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.09%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.34%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.42%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	6.42%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.75%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.83%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.83%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.83%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.92%
Lake Chemocline	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Chemocline	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.92%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.92%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental
3300004126	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (version 2)	Environmental
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300010965	Microbial communities from Lake Cadagno chemocline, Switzerland. Combined Assembly of Gp0156211, Gp0156621	Environmental
3300012726	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES115 metaT (Metagenome Metatranscriptome)	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental
3300020556	Freshwater microbial communities from Lake Mendota, WI - 03AUG2012 deep hole epilimnion (SPAdes)	Environmental
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental
3300034092	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2012-rr0069	Environmental
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1095221413	3300002408	Freshwater	VTFPQGTLPRLIQVALAEVGTAETGNNETKYGKFMKADKLAWCG
B570J40625_1001117715	3300002835	Freshwater	VTFPQGTLPRLIQVALAEVGTAETGNNETKYGKFMKADKL
B570J40625_1003963773	3300002835	Freshwater	VTFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLPWCGSF
B570J40625_1005464081	3300002835	Freshwater	VEHLTKMFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKA
B570J40625_1006003381	3300002835	Freshwater	VSSFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLPWCGS
B570J40625_1009758683	3300002835	Freshwater	VTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKL
B570J40625_1011415283	3300002835	Freshwater	MFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSF
JGI25925J51416_100564371	3300003497	Freshwater Lake	MSSFPQGTLPRLIQVALAEVGTAETGNNETXXGKHMXADKLPWCGSXINWCADQAGVD
Ga0063232_100864571	3300004054	Freshwater Lake	VTFPQGTLSRLIEVALAEVGTAEIGNNETKYGKHMKADKLPWCG
Ga0066177_102212641	3300004096	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCG
Ga0066177_105176483	3300004096	Freshwater Lake	VTFPQGTLPRLIQVALAEVGTAEIGNNETKYGKHMKADKLPWC
Ga0066178_101993633	3300004124	Freshwater Lake	VTFAQGTLPRLIQVALAEVGVAETGNNETKYGKHMKADKLPWCGS
Ga0066179_100314131	3300004126	Freshwater Lake	VTFAQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSF
Ga0066179_100396103	3300004126	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGDNETKYGKHMKADKL
Ga0066179_101331033	3300004126	Freshwater Lake	VTFPQGTLSRLIEVALAEVGTAEIGNNETKYGKHMNADKL
Ga0069718_158174751	3300004481	Sediment	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGS
Ga0070374_100409574	3300005517	Freshwater Lake	VTFPQGTLSRLIEVALAEVGTAEIGNNETKYGKHMKADKL
Ga0068876_103663523	3300005527	Freshwater Lake	MSSFPQGTLPRLIQVALAEVGTAETGNNETKYGKYMKADKLPWCGS
Ga0049081_102973911	3300005581	Freshwater Lentic	MSNFPQGTLPRLIQIALAEVGTAETGNNETKYGKHM
Ga0070744_101488153	3300006484	Estuarine	VTFPQGTLPRLIQVALAEVGVAETGNNETKYGKHMKADKLPWCGS
Ga0105050_102529503	3300007516	Freshwater	MIYPQGTSAAMIEVALAEVGTVETGENLTKYGKHMKANGLPWCGSFLNWC
Ga0105050_102838591	3300007516	Freshwater	MIYPQGTSAALIAVALAEVGTVETGENLTKYGKHMKANGLPWCGSFL
Ga0105050_103057561	3300007516	Freshwater	MIYPQGTRAALVEVALAEVGTVETGENLTKYGKHMKANGLPWC
Ga0105052_110308581	3300007523	Freshwater	MIYPQGTRAAMIEVALAEVGTVETGENWTKYGKHMKANGLPWCGSFLNWCAD
Ga0102881_12388273	3300007551	Estuarine	MTFPQGTLSRLIEVALAEVGTAETGNNETKYGKHMKADKL
Ga0105051_104229601	3300007722	Freshwater	MIYPQGTRAAMVEVALAEVGTVETGENLTKYGKHMKANGLPWCG
Ga0105051_107989791	3300007722	Freshwater	MIYPQGTSAAMVEVALAEVGTVETGENLTKYGKHMKANGLPWCGSFLN
Ga0105051_109993903	3300007722	Freshwater	MIYPQGTSAAMIEVALAEVGTVETGENLTKYGKHMKANGLPWCGSFL
Ga0114336_12117223	3300008261	Freshwater, Plankton	MSNFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKAD
Ga0114364_10066689	3300008267	Freshwater, Plankton	MSNFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKA
Ga0114876_12010293	3300008448	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHM
Ga0114876_12309173	3300008448	Freshwater Lake	MSFPQGTLPRLIQVALAEVGTAETGNNETKYGKFMKADKLPW
Ga0114880_11856531	3300008450	Freshwater Lake	MSNFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADK
Ga0114978_103317804	3300009159	Freshwater Lake	MSSFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADK
Ga0114978_104997613	3300009159	Freshwater Lake	MSNFSQGTLPRLIQVALAEVGTAETGNNETKYGKHM
Ga0105097_100539484	3300009169	Freshwater Sediment	MSNFPQGTLPRLIQIALAEVGTIETGNNETKYGKFMKADKLP
Ga0114979_103465551	3300009180	Freshwater Lake	LSNFPQGTLPRLIQVALAEVGTAETGDNETKYGKHMKADK
Ga0114969_101979211	3300009181	Freshwater Lake	MTINFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWC
Ga0114974_102905121	3300009183	Freshwater Lake	MSFPQGTLPRLIQVALAEVGVAETGNNETKYGKHMKADKLPW
Ga0133913_124690201	3300010885	Freshwater Lake	VTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSF
Ga0138308_1361124	3300010965	Lake Chemocline	VTNFPQGTLPRLIQVALAEVGTAETGQNETKYGKHMKADKLPWC
Ga0157597_10477984	3300012726	Freshwater	MSNFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKAD
Ga0177922_104244443	3300013372	Freshwater	MFPQSTLPRLIEVALAEVGTAETGNNETKYGKHMKADKLPWCG
Ga0177922_105897883	3300013372	Freshwater	VTFPQGTLPRLIQVALAEVGTAETGENETKYGKHMK
Ga0177922_108399251	3300013372	Freshwater	VSQYPEGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLPWCGSFLNWC
Ga0177922_111879743	3300013372	Freshwater	MFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLPWCG
Ga0181363_10286181	3300017707	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSF
Ga0181350_10458463	3300017716	Freshwater Lake	MANFPQGTLPRLIQVALAEVGVAETGNNETKYGKHMNA
Ga0181350_11611123	3300017716	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMK
Ga0181347_10667493	3300017722	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWC
Ga0181347_11435371	3300017722	Freshwater Lake	MTFPQGTLSRLIEVALAEVGTAETGNNETKYGKHMKADKLPWCGS
Ga0181358_10724843	3300017774	Freshwater Lake	VTFPQGTLPRLIQVALAEVGTAEIGNNETKYGKHMKADKLPWCGSF
Ga0181358_10830951	3300017774	Freshwater Lake	MFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKL
Ga0181349_13049741	3300017778	Freshwater Lake	MFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLPWC
Ga0181349_13078103	3300017778	Freshwater Lake	MTFPQGTLPRLIQVALAEVGVAETGNNETKYGKHMKADK
Ga0181346_10400944	3300017780	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGDNETKYGKHM
Ga0181346_10514524	3300017780	Freshwater Lake	MYPDGTAARIIEVALAEVGTAETGNNETKYGKHMKADKLPWCG
Ga0181346_10590431	3300017780	Freshwater Lake	VTFPQGTLSRLIEVALAEVGTAEIGNNETKYGKHMKADKLPWC
Ga0181346_11356733	3300017780	Freshwater Lake	MTFEQGTLPRLIQVALAEVGTAETGENETKYGKHMKADKLPWCGSFLN
Ga0181346_11869241	3300017780	Freshwater Lake	VTFAQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLP
Ga0181348_10643324	3300017784	Freshwater Lake	VTFAQGTLPRLIQVALAEIGTAETGNNETKYGKHMKADK
Ga0181348_12566643	3300017784	Freshwater Lake	LSNFAQGTLPRFIQVALAEVGTAETGNNETKYGKHMKADKLPWCGS
Ga0181355_10420341	3300017785	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGDNETKYGKHMKADKLPWCGSFL
Ga0181355_10833711	3300017785	Freshwater Lake	VTFPQGTLPRLIQVALAEVGTAEIGNNETKYGKHMKADK
Ga0181355_12560051	3300017785	Freshwater Lake	MSNFAQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKL
Ga0181355_12916231	3300017785	Freshwater Lake	VTFPQGTLPRLIQIALAEVGTAETGQNETKYGKHMKADKLPWCGSFL
Ga0181359_11074763	3300019784	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGDNETKYGKHMKADKLPWCGSFLNC
Ga0211729_101240281	3300020172	Freshwater	MTFPQGTLARMIQVALAENGVAETGNNETKYGKHMKADKLPWCGSFLN
Ga0211729_113402964	3300020172	Freshwater	VTFAQGTLPRLIQVALAEVGVAETGNNETKYGKHMKA
Ga0211731_104582401	3300020205	Freshwater	VTNFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSFI
Ga0211731_113516965	3300020205	Freshwater	MSNFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLP
Ga0208486_10336433	3300020556	Freshwater	MFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLPWCGSFL
Ga0181354_10228481	3300022190	Freshwater Lake	MTNFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLS
Ga0181354_11910593	3300022190	Freshwater Lake	MFPQGTLPQLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSFL
Ga0181351_10426414	3300022407	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKAF
Ga0181351_10734614	3300022407	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGDNETKYGKHMKADKLPWCG
Ga0208951_11346531	3300027621	Freshwater Lentic	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSFLNYC
Ga0208133_10993481	3300027631	Estuarine	VTFPQGTLPRLIQVALAEVGTAETENNETKYGKHMKADKLPWCGSFLN
Ga0209443_12441391	3300027707	Freshwater Lake	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSFLN
Ga0209246_100068091	3300027785	Freshwater Lake	MSQFAQGTLPRLIQVALAEIGTAETGNNETKYGKHMKADKLPWC
Ga0209990_102501421	3300027816	Freshwater Lake	MSSFPQGTLPRLIQVALAEVGTAETGNNETKYGKYMKADKLPWCG
Ga0209191_10628091	3300027969	Freshwater Lake	MSNFSQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSFL
Ga0315293_101692861	3300031746	Sediment	MTFPQGTLSRLIEVALAEVGTAETGNNETKYGKFMKADK
Ga0315288_104164434	3300031772	Sediment	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSFL
Ga0315904_100478471	3300031951	Freshwater	VSNFPQGTLPRLIQVALAEVGTAETGNNETKYGKF
Ga0315278_117715341	3300031997	Sediment	MSFPQGTLSRLIEVALAEVGTAETGNNETKYGKHMKADKLPWCGSFL
Ga0315274_101796425	3300031999	Sediment	MTFPQGTLPRLIEVALSEVGTAETGNNETKYGKHMKADKLPWCGS
Ga0315274_109498131	3300031999	Sediment	MTSFPKGTLPRLIEVALAEVGTAETGENETKYGKHMKADKL
Ga0315274_112787591	3300031999	Sediment	MTFAQGTLPRMIQVALAEVGVAETGNNETKYGKHMKADKLPWCGSFLN
Ga0315274_117506093	3300031999	Sediment	MSSFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLPWCGSFLNWC
Ga0315274_119918481	3300031999	Sediment	VTFPQGTLSRLIEVALAEVGTAETGNNETKYGKHMKADNL
Ga0315289_105091332	3300032046	Sediment	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKL
Ga0315289_106781533	3300032046	Sediment	MTYPQGTLPRLIEVALAEVGTAETGNNETKYGKHMKADKLPW
Ga0315289_107693943	3300032046	Sediment	MDCSGVGMTFPQGTLPRLIEVALAEVGTAETGNNETKYGKHMKADKLPWCGSFLNW
Ga0315284_115034403	3300032053	Sediment	MTYPQGTLPRLIEVALAEVGTAETGNNETKYGKHMKADKLPWCGSFLNW
Ga0315283_115559521	3300032164	Sediment	VSIYPQGTLPRLIQVALAEVGVAETKENETKYGKHMKADK
Ga0315268_115151851	3300032173	Sediment	MTFPQGTLSRLIEIALAEVGTAETGNNETKYGKFMKADKLP
Ga0315275_105254774	3300032401	Sediment	VSSFPQGTLPRLIQVALAENGVAETGINETKYGKHMKADKLPWCGSY
Ga0315273_118142533	3300032516	Sediment	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADKLP
Ga0334980_0414670_1_117	3300033816	Freshwater	MTTFPQGTLPRLIQVALAEVGTTETGDNETKYGKFMKAD
Ga0334994_0045774_3_113	3300033993	Freshwater	MSNFPQGTLPRLIQVALAEVGTIETGNNETKYGKFMK
Ga0334979_0553779_491_616	3300033996	Freshwater	MSFPQGTLPRLIQVALAEVGVAETGDNETKYGKHMKADKLPW
Ga0334986_0070455_2049_2159	3300034012	Freshwater	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKA
Ga0335023_0169758_3_152	3300034050	Freshwater	MSNFPQGTLPRLIQIALAEVGTAEIGNNETKYGKHMKADKLPWCGSFLNW
Ga0334990_0154823_1116_1250	3300034068	Freshwater	MTFPQGTLPRLIQIALAEVGTAETGNNETKYGKHMKADKLPWCGS
Ga0335010_0056677_2658_2786	3300034092	Freshwater	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKFMKADKLPWC
Ga0335027_0080971_2399_2524	3300034101	Freshwater	MTFPQGTLPRLIQIALAEVGTAETGNNETKYGKFMKADKLPW
Ga0335031_0788818_385_531	3300034104	Freshwater	MSSFPQGTLPRLIQVALAEVGTAETGNNETKYGKFMKADKLPWCGSFLN
Ga0334997_0172789_2_118	3300034280	Freshwater	MTFPQGTLPRLIQVALAEVGTAETGNNETKYGKHMKADK