Metagenome / Metatranscriptome Family F088854

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088854
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	65 residues
Representative Sequence	LRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.54 %
% of genes near scaffold ends (potentially truncated)	33.03 %
% of genes from short scaffolds (< 2000 bps)	88.07 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.229 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (10.092 % of family members)
Environment Ontology (ENVO)	Unclassified (38.532 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.615 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 73.44% β-sheet: 0.00% Coil/Unstructured: 26.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01569	PAP2	31.19
PF03734	YkuD	20.18
PF13231	PMT_2	1.83
PF13474	SnoaL_3	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	20.18
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	20.18

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.23 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.23 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.23 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	73.39 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	69.72 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	66.97 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	22.94 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	22.94 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	5.50 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	2.75 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	22.94 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	2.75 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	1.83 %
Hyphomicrobium zavarzinii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_2597_length_997_cov_8.334002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
2228664021\|ICCgaii200_c1040181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1303	Open in IMG/M
2228664021\|ICCgaii200_c1040710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1531	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0734792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2039	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101988285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1666	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101990625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1452	Open in IMG/M
3300000956\|JGI10216J12902_100099256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1519	Open in IMG/M
3300003996\|Ga0055467_10303915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	511	Open in IMG/M
3300004114\|Ga0062593_100207586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1568	Open in IMG/M
3300004114\|Ga0062593_102466366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300004157\|Ga0062590_100623918	Not Available	953	Open in IMG/M
3300004463\|Ga0063356_101613975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	966	Open in IMG/M
3300005093\|Ga0062594_100054203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2080	Open in IMG/M
3300005169\|Ga0066810_10006980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium zavarzinii	1548	Open in IMG/M
3300005332\|Ga0066388_100651940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1667	Open in IMG/M
3300005332\|Ga0066388_100959280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1425	Open in IMG/M
3300005332\|Ga0066388_106060486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	611	Open in IMG/M
3300005347\|Ga0070668_100824163	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300005347\|Ga0070668_101782363	Not Available	566	Open in IMG/M
3300005367\|Ga0070667_100132787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2174	Open in IMG/M
3300005438\|Ga0070701_10352274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	920	Open in IMG/M
3300005440\|Ga0070705_101542201	Not Available	558	Open in IMG/M
3300005444\|Ga0070694_100476906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	989	Open in IMG/M
3300005456\|Ga0070678_100572230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1005	Open in IMG/M
3300005457\|Ga0070662_101181906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	657	Open in IMG/M
3300005530\|Ga0070679_102111253	Not Available	513	Open in IMG/M
3300005545\|Ga0070695_101823781	Not Available	510	Open in IMG/M
3300005578\|Ga0068854_101798692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	562	Open in IMG/M
3300006577\|Ga0074050_10013531	All Organisms → cellular organisms → Bacteria	2190	Open in IMG/M
3300006854\|Ga0075425_102104811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	630	Open in IMG/M
3300009091\|Ga0102851_12304817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	614	Open in IMG/M
3300009094\|Ga0111539_10406814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1585	Open in IMG/M
3300009098\|Ga0105245_12613369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	558	Open in IMG/M
3300009100\|Ga0075418_10195460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2154	Open in IMG/M
3300009101\|Ga0105247_11770404	Not Available	513	Open in IMG/M
3300009146\|Ga0105091_10046528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1920	Open in IMG/M
3300009157\|Ga0105092_10106694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1539	Open in IMG/M
3300009166\|Ga0105100_10405985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	824	Open in IMG/M
3300009167\|Ga0113563_11344720	Not Available	837	Open in IMG/M
3300009168\|Ga0105104_10282610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	910	Open in IMG/M
3300009176\|Ga0105242_12838654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	535	Open in IMG/M
3300009177\|Ga0105248_11066707	Not Available	913	Open in IMG/M
3300009545\|Ga0105237_11506853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	679	Open in IMG/M
3300009553\|Ga0105249_12240783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	619	Open in IMG/M
3300009609\|Ga0105347_1174835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	851	Open in IMG/M
3300010396\|Ga0134126_12907566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	518	Open in IMG/M
3300011119\|Ga0105246_10445874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1086	Open in IMG/M
3300012914\|Ga0157297_10527278	Not Available	502	Open in IMG/M
3300012943\|Ga0164241_10090196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2206	Open in IMG/M
3300012964\|Ga0153916_10143019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2325	Open in IMG/M
3300012964\|Ga0153916_11363950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	786	Open in IMG/M
3300014271\|Ga0075326_1073702	Not Available	935	Open in IMG/M
3300014308\|Ga0075354_1066324	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300014968\|Ga0157379_12217113	Not Available	546	Open in IMG/M
3300017792\|Ga0163161_10425909	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300017792\|Ga0163161_11254282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	643	Open in IMG/M
3300018028\|Ga0184608_10143751	Not Available	1025	Open in IMG/M
3300018052\|Ga0184638_1334441	Not Available	509	Open in IMG/M
3300018054\|Ga0184621_10036805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1589	Open in IMG/M
3300018078\|Ga0184612_10171718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1131	Open in IMG/M
3300018476\|Ga0190274_12407546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	624	Open in IMG/M
3300018476\|Ga0190274_12971783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	569	Open in IMG/M
3300019361\|Ga0173482_10503419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	588	Open in IMG/M
3300023102\|Ga0247754_1196715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	509	Open in IMG/M
3300023260\|Ga0247798_1020941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	819	Open in IMG/M
3300025313\|Ga0209431_11056982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300025899\|Ga0207642_10842363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	585	Open in IMG/M
3300025899\|Ga0207642_11056676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	524	Open in IMG/M
3300025907\|Ga0207645_10744662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	666	Open in IMG/M
3300025918\|Ga0207662_10521075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	820	Open in IMG/M
3300026075\|Ga0207708_10442888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1081	Open in IMG/M
3300026075\|Ga0207708_11117818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	687	Open in IMG/M
3300026088\|Ga0207641_11268960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	737	Open in IMG/M
3300026118\|Ga0207675_102622262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	513	Open in IMG/M
3300027401\|Ga0208637_1020417	Not Available	725	Open in IMG/M
3300027577\|Ga0209874_1145405	Not Available	537	Open in IMG/M
3300027717\|Ga0209998_10013446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1704	Open in IMG/M
3300027723\|Ga0209703_1356472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	509	Open in IMG/M
3300028587\|Ga0247828_10213271	Not Available	1014	Open in IMG/M
3300028589\|Ga0247818_11067344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	573	Open in IMG/M
3300028597\|Ga0247820_10444099	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300028719\|Ga0307301_10214731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	626	Open in IMG/M
3300028809\|Ga0247824_10832899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300028889\|Ga0247827_10638379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	686	Open in IMG/M
3300031455\|Ga0307505_10059604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1696	Open in IMG/M
3300031740\|Ga0307468_101180123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	688	Open in IMG/M
3300031824\|Ga0307413_11649825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	571	Open in IMG/M
3300031854\|Ga0310904_11330182	Not Available	521	Open in IMG/M
3300031858\|Ga0310892_10836827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	640	Open in IMG/M
3300031892\|Ga0310893_10169736	Not Available	861	Open in IMG/M
3300031949\|Ga0214473_10469927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	1409	Open in IMG/M
3300031949\|Ga0214473_12091952	Not Available	549	Open in IMG/M
3300032012\|Ga0310902_10568514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	749	Open in IMG/M
3300032013\|Ga0310906_10302626	Not Available	1021	Open in IMG/M
3300032075\|Ga0310890_11541281	Not Available	548	Open in IMG/M
3300032180\|Ga0307471_100652220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300032180\|Ga0307471_104136230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	512	Open in IMG/M
3300032205\|Ga0307472_100252316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	1384	Open in IMG/M
3300032205\|Ga0307472_100305545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1281	Open in IMG/M
3300033485\|Ga0316626_11453513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300033513\|Ga0316628_102423721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	694	Open in IMG/M
3300033513\|Ga0316628_104182613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	514	Open in IMG/M
3300034176\|Ga0364931_0041119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1383	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.39%
Host-Associated	Host-Associated	26.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.63%
Plants	Host-Associated → Plants	26.61%
Aquatic	Environmental → Aquatic	13.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.09%
Freshwater	Environmental → Aquatic → Freshwater	8.26%
Sediment	Environmental → Aquatic → Sediment	4.59%
Marine	Environmental → Aquatic → Marine	0.92%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.45%
Loam	Environmental → Terrestrial → Soil → Loam	13.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.92%
Sand	Environmental → Terrestrial → Soil → Sand	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.01%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.50%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.75%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.92%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_00476600	2140918013	Soil	GIGLRAEARRLGLTRLRLIEIATAVVLTLAAVLFVGLALWATDEYEMRRAIANFSASSH
ICCgaii200_10401812	2228664021	Soil	LRPHHSIGIRAEARRFGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVHSD
ICCgaii200_10407102	2228664021	Soil	LRQYFGIGLRAEARRLGLTRLRLIEIAVAVVLTLAAVLFVGLALWATDEYEMRRAIANFSASSH
ICChiseqgaiiDRAFT_07347921	3300000033	Soil	HHSIGIRAEARRFGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVHSN*
INPhiseqgaiiFebDRAFT_1019882851	3300000364	Soil	LRPHHGIGMRAEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
INPhiseqgaiiFebDRAFT_1019906253	3300000364	Soil	SIGIRAEARRFGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVHSD*
JGI10216J12902_1000992562	3300000956	Soil	LRPHHSIGIRAEPRRFGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRQGVATVHSN*
Ga0055467_103039151	3300003996	Natural And Restored Wetlands	QHGIGIRAEARRLGLTRGRLIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0062593_1002075862	3300004114	Soil	LRQYLGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0062593_1024663662	3300004114	Soil	VRQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH*
Ga0062590_1006239182	3300004157	Soil	LRPHHSIGIRAEARRFGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVHSD*
Ga0063356_1016139751	3300004463	Arabidopsis Thaliana Rhizosphere	LRQYFGIGLRAEARRLGLTRLRLIEIAVAVVLTLAAVLFVGLALWATDEYEMRRAIANFSASSH*
Ga0062594_1000542031	3300005093	Soil	KGCGRVRQYFGMGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH*
Ga0066810_100069802	3300005169	Soil	LRPHHGIGIRAEARRLGLTRARIVEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATMGAPSN*
Ga0066388_1006519402	3300005332	Tropical Forest Soil	LRSHHGIGIRAEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0066388_1009592802	3300005332	Tropical Forest Soil	LRSHHSIGIRAEARRLGLTRLRLIEIAAALLLTLGALLFVGLAIWATDEYEMSHGGTVVEAPTK*
Ga0066388_1060604862	3300005332	Tropical Forest Soil	LRPHQSIGIRADARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGV
Ga0070668_1008241632	3300005347	Switchgrass Rhizosphere	LRPHHGIGIRSEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVGAPSN*
Ga0070668_1017823631	3300005347	Switchgrass Rhizosphere	LRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0070667_1001327872	3300005367	Switchgrass Rhizosphere	LRPHHGIGMRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0070701_103522741	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RAKGPGRLRQYLGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0070701_103898081	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0070711_1005410092	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0070705_1015422012	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LRPHHGIGIRSEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0070694_1004769062	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RDIRTQRRAPLQALDMDLTHGFTSSEGPGRLRQYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0070678_1005722302	3300005456	Miscanthus Rhizosphere	LRQYLGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSAPAR*
Ga0070662_1011819061	3300005457	Corn Rhizosphere	RQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH*
Ga0070679_1021112532	3300005530	Corn Rhizosphere	ALDMRLRHGFTSSERTGTLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0070695_1018237812	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	FTSSEGPGRLRQYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0068854_1017986922	3300005578	Corn Rhizosphere	PHHCIGMRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0068863_1013270151	3300005841	Switchgrass Rhizosphere	SEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0074050_100135313	3300006577	Soil	LRPHHGIGIRAEARRLGLTRARILEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0075425_1021048112	3300006854	Populus Rhizosphere	LRPHHSIGIRAEARRFGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGLATVHSN*
Ga0102851_123048172	3300009091	Freshwater Wetlands	MASRRAKGLERLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0111539_104068142	3300009094	Populus Rhizosphere	MRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSTAR*
Ga0105245_126133692	3300009098	Miscanthus Rhizosphere	MRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSASSH*
Ga0075418_101954602	3300009100	Populus Rhizosphere	MASQAKGLERLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTNANFSSPAR*
Ga0105247_117704042	3300009101	Switchgrass Rhizosphere	VRQYFGMGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH*
Ga0105091_100465282	3300009146	Freshwater Sediment	MASRRAKGLERLRQYLGTGIRAEAWRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0105092_101066941	3300009157	Freshwater Sediment	RAIGLERLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0105100_104059851	3300009166	Freshwater Sediment	LRQYLGTGLRAEARRLGLTRLRLIEIAVAVLLTLAALLFVGLAIWATDEYEMRRGVANFSSPAH*
Ga0113563_113447202	3300009167	Freshwater Wetlands	MASRRAKGPERLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0105104_102826102	3300009168	Freshwater Sediment	MGLRTEARRRGLTRPRLIEIAVALLLTLAALLFVGLAIWAADEYEMRHAIANFSAPAH*
Ga0105242_128386542	3300009176	Miscanthus Rhizosphere	IGMRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0105248_110667072	3300009177	Switchgrass Rhizosphere	VRQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAQ*
Ga0105237_115068532	3300009545	Corn Rhizosphere	ATRDIRTQRRAPLQALDMDLTHGFTSSEGPGRLRQYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0105249_122407832	3300009553	Switchgrass Rhizosphere	MRLRHGITSSERTGTLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0105347_11748352	3300009609	Soil	MASRRAKGLERLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANVSSPAR*
Ga0134126_129075661	3300010396	Terrestrial Soil	VRQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMR
Ga0105246_104458742	3300011119	Miscanthus Rhizosphere	MRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0157297_105272781	3300012914	Soil	KGPGRLRQYLGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0164241_100901962	3300012943	Soil	MDLTHGFTSSEGPGRLRQYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR*
Ga0164300_100759842	3300012951	Soil	MRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGGAIVHSN*
Ga0153916_101430191	3300012964	Freshwater Wetlands	LRPHHGIGIRAEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0153916_113639501	3300012964	Freshwater Wetlands	MRAEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN*
Ga0075326_10737022	3300014271	Natural And Restored Wetlands	LRQHFATGLRSEARRLGLTRHRLIEIAVAVLLTFAALLFVGLAVWATDEYEMHRGVAAFGAPP*
Ga0075354_10663242	3300014308	Natural And Restored Wetlands	MDLTHGFTSSEGPGRLRQYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANF
Ga0157379_122171132	3300014968	Switchgrass Rhizosphere	VRQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRAIANFSSPAH*
Ga0163161_104259092	3300017792	Switchgrass Rhizosphere	LRPHHGIGIRSEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0163161_112542822	3300017792	Switchgrass Rhizosphere	SSRAKGCGRVRQYFGIGLRAEAGRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH
Ga0184608_101437512	3300018028	Groundwater Sediment	LRPHHGIGIRAEARRLGLTRARIVEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVGAPSN
Ga0184638_13344412	3300018052	Groundwater Sediment	LRQYLGTGMRAEARRLGLTRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSSPAR
Ga0184621_100368051	3300018054	Groundwater Sediment	LRPHHGIGIRAEARRLGLTRARIFEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVGAPSN
Ga0184612_101717182	3300018078	Groundwater Sediment	LRQYLCTGIRAEARRLGLTRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSSPAR
Ga0190274_124075461	3300018476	Soil	LRQHFAMGLRAEARRLGLTRLRLVEIAAAVVLTLAAMLFVGLAVWATDEYQMNRGIASFGAPAH
Ga0190274_129717831	3300018476	Soil	EARRLGLSRLRFIEIAAALLLTLAAVLFVGLAIWATDEYEMRRAIANFSAPTH
Ga0173482_105034192	3300019361	Soil	MRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0247754_11967152	3300023102	Soil	KGCGRVRQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH
Ga0247798_10209412	3300023260	Soil	VRQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH
Ga0209431_110569822	3300025313	Soil	LRQYFGIGLRAEARRLGLSRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSSPAH
Ga0207642_108423631	3300025899	Miscanthus Rhizosphere	GCGRVRQYFGIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH
Ga0207642_110566762	3300025899	Miscanthus Rhizosphere	RAKGPGRLRQYLGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0207710_103037662	3300025900	Switchgrass Rhizosphere	MRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0207645_107446622	3300025907	Miscanthus Rhizosphere	MRLRHGFTSSERTGTLRQHLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0207662_105210752	3300025918	Switchgrass Rhizosphere	LRPHHGIGMRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0207670_104731832	3300025936	Switchgrass Rhizosphere	MRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHS
Ga0207708_104428882	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	QYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0207708_111178182	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0207641_112689602	3300026088	Switchgrass Rhizosphere	IGMRSEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0207675_1026222621	3300026118	Switchgrass Rhizosphere	GIGLRAEARRLGLSRLRLIEIAAALLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAH
Ga0208637_10204172	3300027401	Soil	LRPHHGIGIRAEARRLGLTRARIVEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATMGAPSN
Ga0209874_11454052	3300027577	Groundwater Sand	LRPHHGIGIRAEARRLGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVHSN
Ga0209998_100134462	3300027717	Arabidopsis Thaliana Rhizosphere	LRPHHSIGIRAEPRRFGLTRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVHSD
Ga0209703_13564722	3300027723	Freshwater Sediment	QYLGTGLRAEARRLGLTRLRLIEIAVAVLLTLAALLFVGLAIWATDEYEMRRGVANFSSPAH
Ga0247828_102132712	3300028587	Soil	MRAEVRRLGLTRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSAPAP
Ga0247818_110673441	3300028589	Soil	LRQYLGTGMRAEVRRLGLSRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSAPAP
Ga0247820_104440992	3300028597	Soil	LRQYLGTGMRAEVRRLGLTRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSAPAP
Ga0307301_102147311	3300028719	Soil	HGIGIRAEARRLGLTRARIFEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVGAPSN
Ga0247824_108328992	3300028809	Soil	MASRRAKGPGRLRQYLGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANF
Ga0247827_106383792	3300028889	Soil	LRPHHRVGIRAEARRLGLTRARIVEIAVAVSLTLAALLFVGLAIWATDEYEMRRGVATVGAPSN
Ga0307505_100596042	3300031455	Soil	LRQHFAMGLRAEVRRLGLTRLRLCEIAVAVLLTLAALLFVGLAIWATDEYEMRRGIANFIAPAD
Ga0307468_1011801232	3300031740	Hardwood Forest Soil	MRAEARRLGLSRARIIEIAIAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0307413_116498252	3300031824	Rhizosphere	LRQYFGIGLRAEARRLGLSRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSAPTH
Ga0310904_113301822	3300031854	Soil	GRRTATRDIRTQRRGPLPALDMRLRHGFTSSERTGTLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0310892_108368272	3300031858	Soil	MRLRHGFTSSERTGTLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0310893_101697362	3300031892	Soil	MSSERTGTLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0214473_104699272	3300031949	Soil	MGFNRAKGCGRLRQYFGIGLRAEARRLGLSRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSAPAH
Ga0214473_120919521	3300031949	Soil	LRQYSGIGLRAEARRLGLSRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSSPAR
Ga0310902_105685142	3300032012	Soil	PALDMRLRHGFTSSERTGTLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0310906_103026261	3300032013	Soil	MDLTHGFTSSEGPGRLRQYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0310890_115412812	3300032075	Soil	ALDMDLTHGFTSSEGPGRLRQYFGTGMRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRTIANFSSPAR
Ga0307471_1006522202	3300032180	Hardwood Forest Soil	MRAEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0307471_1041362301	3300032180	Hardwood Forest Soil	LLRLRPHHGIGMRAEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0307472_1002523161	3300032205	Hardwood Forest Soil	LRPRHGIGMRAEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0307472_1003055452	3300032205	Hardwood Forest Soil	LRPHHGIGIRSEARRLGLSRARIIEIAVAVSLTLAALLFVGLAIWATDEYEMRQGVATVHSN
Ga0316626_114535131	3300033485	Soil	MASRRAKGPERLRQYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEFEMRRTIANFSSPAR
Ga0316628_1024237212	3300033513	Soil	LRPHHGIGIRSEARRLGLTRARIVEIAVAVSLTLAALLFVGLAIWATDEYEMERGVATVHSN
Ga0316628_1041826132	3300033513	Soil	QYLGTGIRAEARRLGLTRPRLIEIAVAVLLTLAAVLFVGLAIWATDEFEMRRTIANFSSPAR
Ga0364931_0041119_68_295	3300034176	Sediment	MASRQAKGPGRLRQYLGTGIRAEARRLGLTRLRLIEIAVAVLLTLAAVLFVGLAIWATDEYEMRRAIANFSSPAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088854

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences