Metagenome / Metatranscriptome Family F088840

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Basic Information
Family ID	F088840
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	44 residues
Representative Sequence	MAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRAGPFG
Number of Associated Samples	106
Number of Associated Scaffolds	109

Basic Information

Family ID

F088840

Family Type

Metagenome / Metatranscriptome

Number of Sequences

109

Average Sequence Length

44 residues

Representative Sequence

MAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRAGPFG

Number of Associated Samples

106

Number of Associated Scaffolds

109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.41 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.07 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Quality Assessment

Transcriptomic Evidence

Yes

Most common taxonomic group

Bacteria

% of genes with valid RBS motifs

95.41 %

% of genes near scaffold ends (potentially truncated)

100.00 %

% of genes from short scaffolds (< 2000 bps)

88.07 %

Associated GOLD sequencing projects

104

AlphaFold2 3D model prediction

Yes

3D model pTM-score

0.46

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Hidden Markov Model

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Most Common Taxonomy
Group	Bacteria (93.578 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Taxonomy

Group

Bacteria (93.578 % of family members)

NCBI Taxonomy ID

Taxonomy

All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.183 % of family members)
Environment Ontology (ENVO)	Unclassified (16.514 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.376 % of family members)

Most Common Ecosystem

GOLD Ecosystem

Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(20.183 % of family members)

Environment Ontology (ENVO)

Unclassified
(16.514 % of family members)

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Soil (non-saline)
(51.376 % of family members)

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 1JGIcombinedJ51221_100632732 2Ga0062389_1035295482 3Ga0062388_1027845261 4Ga0070714_1015902791 5Ga0070733_101413361 6Ga0068851_100194835 7Ga0066696_108415991 8Ga0066652_1009289531 9Ga0074060_100189781 10Ga0066665_102046041 11Ga0079221_108295082 12Ga0079219_124151581 13Ga0099827_101307521 14Ga0127503_105794901 15Ga0134086_103783412 16Ga0074045_101066451 17Ga0126376_103470583 18Ga0126372_105632941 19Ga0126379_117071072 20Ga0134121_100980804 21Ga0137378_108529861 22Ga0137367_100405011 23Ga0157337_10261012 24Ga0157350_10089811 25Ga0134081_102967772 26Ga0182018_107463792 27Ga0181525_106133101 28Ga0132256_1028841592 29Ga0187814_103634121 30Ga0187777_102702211 31Ga0187863_104952151 32Ga0187855_107265371 33Ga0187859_101480453 34Ga0187772_109418971 35Ga0173482_102587111 36Ga0187768_11107721 37Ga0210399_113172492 38Ga0210393_100966241 39Ga0210393_106107541 40Ga0210397_115068542 41Ga0210387_111920381 42Ga0210398_100863924 43Ga0126371_112849051 44Ga0224541_10087102 45Ga0247676_10085243 46Ga0207692_104986451 47Ga0207699_103489352 48Ga0207654_100827941 49Ga0207700_111949162 50Ga0207691_101890681 51Ga0207648_101929581 52Ga0207698_116416662 53Ga0209474_104813772 54Ga0208986_10243451 55Ga0209111_10136171 56Ga0208366_10319881 57Ga0209114_10193942 58Ga0209221_10064905 59Ga0209530_10990162 60Ga0209139_102241821 61Ga0209811_104347751 62Ga0209169_103675771 63Ga0209380_103513812 64Ga0209415_110130671 65Ga0302220_101771492 66Ga0302220_103534321 67Ga0302219_102456812 68Ga0302228_100861731 69Ga0311340_101930911 70Ga0311352_106080022 71Ga0311338_109135042 72Ga0311338_117860691 73Ga0302178_100720681 74Ga0302181_100126726 75Ga0302179_105422141 76Ga0311353_100275161 77Ga0302183_104185691 78Ga0311372_115874991 79Ga0311355_100134471 80Ga0311356_110497272 81Ga0311354_110138241 82Ga0265753_10492431 83Ga0307495_100661382 84Ga0170824_1018450011 85Ga0302307_103704201 86Ga0302324_1000196371 87Ga0318528_105263521 88Ga0318561_104590721 89Ga0318535_105135151 90Ga0318521_101410361 91Ga0318523_105762272 92Ga0318512_103187121 93Ga0306919_110354522 94Ga0306925_111486092 95Ga0310912_105207791 96Ga0318530_104253701 97Ga0318556_107539952 98Ga0318558_105186352 99Ga0318575_105978821 100Ga0318514_100696433 101Ga0318518_104181251 102Ga0318577_104346252 103Ga0306920_1027482462 104Ga0335085_117368142 105Ga0335078_110908601 106Ga0335083_104471141 107Ga0335076_109464192 108Ga0335077_101767391 109Ga0318519_102379351
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Full Alignment

Alignment of all the sequences in the family.

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62

1JGIcombinedJ51221_100632732

2Ga0062389_1035295482

3Ga0062388_1027845261

4Ga0070714_1015902791

5Ga0070733_101413361

6Ga0068851_100194835

7Ga0066696_108415991

8Ga0066652_1009289531

9Ga0074060_100189781

10Ga0066665_102046041

11Ga0079221_108295082

12Ga0079219_124151581

13Ga0099827_101307521

14Ga0127503_105794901

15Ga0134086_103783412

16Ga0074045_101066451

17Ga0126376_103470583

18Ga0126372_105632941

19Ga0126379_117071072

20Ga0134121_100980804

21Ga0137378_108529861

22Ga0137367_100405011

23Ga0157337_10261012

24Ga0157350_10089811

25Ga0134081_102967772

26Ga0182018_107463792

27Ga0181525_106133101

28Ga0132256_1028841592

29Ga0187814_103634121

30Ga0187777_102702211

31Ga0187863_104952151

32Ga0187855_107265371

33Ga0187859_101480453

34Ga0187772_109418971

35Ga0173482_102587111

36Ga0187768_11107721

37Ga0210399_113172492

38Ga0210393_100966241

39Ga0210393_106107541

40Ga0210397_115068542

41Ga0210387_111920381

42Ga0210398_100863924

43Ga0126371_112849051

44Ga0224541_10087102

45Ga0247676_10085243

46Ga0207692_104986451

47Ga0207699_103489352

48Ga0207654_100827941

49Ga0207700_111949162

50Ga0207691_101890681

51Ga0207648_101929581

52Ga0207698_116416662

53Ga0209474_104813772

54Ga0208986_10243451

55Ga0209111_10136171

56Ga0208366_10319881

57Ga0209114_10193942

58Ga0209221_10064905

59Ga0209530_10990162

60Ga0209139_102241821

61Ga0209811_104347751

62Ga0209169_103675771

63Ga0209380_103513812

64Ga0209415_110130671

65Ga0302220_101771492

66Ga0302220_103534321

67Ga0302219_102456812

68Ga0302228_100861731

69Ga0311340_101930911

70Ga0311352_106080022

71Ga0311338_109135042

72Ga0311338_117860691

73Ga0302178_100720681

74Ga0302181_100126726

75Ga0302179_105422141

76Ga0311353_100275161

77Ga0302183_104185691

78Ga0311372_115874991

79Ga0311355_100134471

80Ga0311356_110497272

81Ga0311354_110138241

82Ga0265753_10492431

83Ga0307495_100661382

84Ga0170824_1018450011

85Ga0302307_103704201

86Ga0302324_1000196371

87Ga0318528_105263521

88Ga0318561_104590721

89Ga0318535_105135151

90Ga0318521_101410361

91Ga0318523_105762272

92Ga0318512_103187121

93Ga0306919_110354522

94Ga0306925_111486092

95Ga0310912_105207791

96Ga0318530_104253701

97Ga0318556_107539952

98Ga0318558_105186352

99Ga0318575_105978821

100Ga0318514_100696433

101Ga0318518_104181251

102Ga0318577_104346252

103Ga0306920_1027482462

104Ga0335085_117368142

105Ga0335078_110908601

106Ga0335083_104471141

107Ga0335076_109464192

108Ga0335077_101767391

109Ga0318519_102379351

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 1JGIcombinedJ51221_100632732 2Ga0062388_1027845261 3Ga0068851_100194835 4Ga0066665_102046041 5Ga0126372_105632941 6Ga0182018_107463792 7Ga0187859_101480453 8Ga0187772_109418971 9Ga0224541_10087102 10Ga0209169_103675771 11Ga0311338_109135042 12Ga0302178_100720681 13Ga0318528_105263521
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44. 1Ga0210397_115068542 2JGIcombinedJ51221_100632732 3Ga0062389_1035295482 4Ga0070714_1015902791 5Ga0066665_102046041 6Ga0137378_108529861 7Ga0182018_107463792 8Ga0181525_106133101 9Ga0187814_103634121 10Ga0187855_107265371 11Ga0187859_101480453 12Ga0187772_109418971 13Ga0173482_102587111 14Ga0187768_11107721 15Ga0210393_100966241 16Ga0207691_101890681 17Ga0208366_10319881 18Ga0209169_103675771 19Ga0209380_103513812 20Ga0209415_110130671 21Ga0302178_100720681 22Ga0318528_105263521 23Ga0318575_105978821 24Ga0318519_102379351
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.55% β-sheet: 8.22% Coil/Unstructured: 71.23%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted Topology & Secondary Structure

Classification:

Globular

Signal Peptide:

Secondary Structure distribution:

α-helix: 20.55% β-sheet: 8.22% Coil/Unstructured: 71.23%

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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Structure Viewer

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Per-residue confidence (pLDDT):
0-50 51-70 71-90 91-100

pTM-score: 0.46

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00293	NUDIX	47.71
PF07729	FCD	5.50
PF05199	GMC_oxred_C	1.83
PF00106	adh_short	0.92
PF01068	DNA_ligase_A_M	0.92
PF13280	WYL	0.92
PF00732	GMC_oxred_N	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	5.50
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	5.50
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	2.75
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.92

COG ID

Name

Functional Category

% Frequency in 109 Family Scaffolds

COG1802

DNA-binding transcriptional regulator, GntR family

Transcription [K]

5.50

COG2186

DNA-binding transcriptional regulator, FadR family

Transcription [K]

5.50

COG2303

Choline dehydrogenase or related flavoprotein

Lipid transport and metabolism [I]

2.75

COG1423

ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family

Replication, recombination and repair [L]

0.92

COG1793

ATP-dependent DNA ligase

Replication, recombination and repair [L]

0.92

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.58 %
Unclassified	root	N/A	6.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.58 %
Unclassified	root	N/A	6.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.58 %
Unclassified	root	N/A	6.42 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.83 %
Unclassified	root	N/A	6.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	90.83 %
Unclassified	root	N/A	6.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	76.15 %
Unclassified	root	N/A	6.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	66.06 %
Unclassified	root	N/A	6.42 %

Name

Rank

Taxonomy

Distribution

Actinomycetales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales

0.92 %

Frankiales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales

0.92 %

Micrococcales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales

0.92 %

Streptosporangiales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales

66.06 %

Unclassified

root

N/A

6.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	66.06 %
Unclassified	root	N/A	6.42 %

Name

Rank

Taxonomy

Distribution

Actinomycetales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales

0.92 %

Frankiaceae

family

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae

0.92 %

Micrococcales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales

0.92 %

Treboniaceae

family

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae

66.06 %

Unclassified

root

N/A

6.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	66.06 %
Unclassified	root	N/A	6.42 %

Name

Rank

Taxonomy

Distribution

Actinomycetales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales

0.92 %

Frankia

genus

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia

0.92 %

Micrococcales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales

0.92 %

Trebonia

genus

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia

66.06 %

Unclassified

root

N/A

6.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.92 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	66.06 %
Unclassified	root	N/A	6.42 %

Name

Rank

Taxonomy

Distribution

Actinomycetales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales

0.92 %

Frankia

genus

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia

0.92 %

Micrococcales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales

0.92 %

Trebonia kvetii

species

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii

66.06 %

Unclassified

root

N/A

6.42 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10063273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1430	Open in IMG/M
3300004092\|Ga0062389_103529548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300004635\|Ga0062388_102784526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300005435\|Ga0070714_101590279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300005541\|Ga0070733_10141336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1558	Open in IMG/M
3300005834\|Ga0068851_10019483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3278	Open in IMG/M
3300006032\|Ga0066696_10841599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	585	Open in IMG/M
3300006046\|Ga0066652_100928953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300006604\|Ga0074060_10018978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	726	Open in IMG/M
3300006796\|Ga0066665_10204604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1534	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

3300003505|JGIcombinedJ51221_10063273

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii

1430

Open in IMG/M

3300004092|Ga0062389_103529548

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

586

Open in IMG/M

3300004635|Ga0062388_102784526

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

515

Open in IMG/M

3300005435|Ga0070714_101590279

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

638

Open in IMG/M

3300005541|Ga0070733_10141336

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales

1558

Open in IMG/M

3300005834|Ga0068851_10019483

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

3278

Open in IMG/M

3300006032|Ga0066696_10841599

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii

585

Open in IMG/M

3300006046|Ga0066652_100928953

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

829

Open in IMG/M

3300006604|Ga0074060_10018978

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii

726

Open in IMG/M

3300006796|Ga0066665_10204604

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii

1534

Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.58%
Host-Associated	Host-Associated	6.42%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	8.26%
Plants	Host-Associated → Plants	6.42%
Terrestrial	Environmental → Terrestrial	85.32%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	8.26%
Peat	Environmental → Terrestrial → Peat	18.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil	66.97%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.92%
Loam	Environmental → Terrestrial → Soil → Loam	11.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	18.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.34%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	18.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.75%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	17.43%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.75%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.18%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.75%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.75%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M

Showing 1 to 10 of 106 entries

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Geographical Distribution

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Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100632732	3300003505	Forest Soil	MAEILNAHGSLNDIFVTALTPGDFASDADLRAFVRNLCDRHGPFGG
Ga0062389_1035295482	3300004092	Bog Forest Soil	MAEILNAHGSKNDIFVAAMTPCDFASQADLRAFVTHLCDRSGP
Ga0062388_1027845261	3300004635	Bog Forest Soil	MAEILNAHGSKNDIFVAAMTPCDFASQADLRAFVTHLCDR
Ga0070714_1015902791	3300005435	Agricultural Soil	MAEILNAHGSRNDIFVVPMTPRDFASDGELRAFVKRLCDRAGPFGGD
Ga0070733_101413361	3300005541	Surface Soil	MAEILNAHGSLNDIFVAELTPGDFASETDLRAFVRNLCDRGGPF
Ga0068851_100194835	3300005834	Corn Rhizosphere	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFARRLCDRAGPFGGDGIYLYDAAPPIP
Ga0066696_108415991	3300006032	Soil	VVGILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRA
Ga0066652_1009289531	3300006046	Soil	VAEILNAHGSKNDIFVAEMTPGDFASDEDLRAFVRRLCDRA
Ga0074060_100189781	3300006604	Soil	VAEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRLCDR
Ga0066665_102046041	3300006796	Soil	VAEILNAHGSKNDIFVVPMRPRDFASDDDLRAFVRRL
Ga0079221_108295082	3300006804	Agricultural Soil	VAEILNAHGSRNDIFVAAMTPRDFASDEDLRAFVRRLCDRAGPFGGD
Ga0079219_124151581	3300006954	Agricultural Soil	VAEILNAYGSKNDIFVAAMTPRDFATDEDLRAFVRRLCDRAGPFGG
Ga0099827_101307521	3300009090	Vadose Zone Soil	MAGILNAHGSKNDIFVVAMTPRDFASDDELRAFVRRLCDRNGPFGGDGV
Ga0127503_105794901	3300010154	Soil	VAEILNAHGSKNDIFVTAMTPRDFASDAGLRAFVRRL
Ga0134086_103783412	3300010323	Grasslands Soil	VAEILNAHGSKNDIFVAAMTPRDFASDAGLRAFVRRLCD
Ga0074045_101066451	3300010341	Bog Forest Soil	MAEILNAHGSKNDIFVVAMTPRDFASGADLRAFVRR
Ga0126376_103470583	3300010359	Tropical Forest Soil	VAEILNAHGSKNDIFVAAMTPRDFASADDLRSFVRRLCDRAGPFGGDGIYFYD
Ga0126372_105632941	3300010360	Tropical Forest Soil	VVEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRVCDRAGPFGGDGI
Ga0126379_117071072	3300010366	Tropical Forest Soil	MAEILNAHGSKNDIFVAAMTPRDFASADDLRGFVRRLCDRAGPFGGDGIYFY
Ga0134121_100980804	3300010401	Terrestrial Soil	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGPFGGDGIY
Ga0137378_108529861	3300012210	Vadose Zone Soil	VVGILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRR
Ga0137367_100405011	3300012353	Vadose Zone Soil	VAEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVR
Ga0157337_10261012	3300012483	Arabidopsis Rhizosphere	VAEILNAHGSKNDIFVAAMTPRDFATDEDLRAFVRRLCDRAGPFGGDGIY
Ga0157350_10089811	3300012499	Unplanted Soil	VAEILNAHGSKNDIFVAAMTPRDFASDEALRAFVRRL
Ga0134081_102967772	3300014150	Grasslands Soil	VVGILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRLCDRAGPFGGDGIY
Ga0182018_107463792	3300014489	Palsa	MAEILSAHGSRNDIFVAAMTPRDFASEAGLRAFVRNLGDRDGPFGGDGIYFYDA
Ga0181525_106133101	3300014654	Bog	VAEILNAHGSKNDIFVAAMTPRDFASEAELAAFVRHLCDRGGPFGGD
Ga0132256_1028841592	3300015372	Arabidopsis Rhizosphere	MAEILNAHGSKNDIFVAAMRPRDFASSDDLRSFVRRLCDRAGPFGGDGIYFYDA
Ga0187814_103634121	3300017932	Freshwater Sediment	MAEILNAHGSMNDIFLMARTPYDFASDADVHAFVRHLCDRAGPFGGD
Ga0187777_102702211	3300017974	Tropical Peatland	VAEILNAHGSKNDIFVAAMTPRDFASGDDLRDFVRRLCDRAGPFGGDGIYFYDAGPRVPE
Ga0187863_104952151	3300018034	Peatland	MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRL
Ga0187855_107265371	3300018038	Peatland	MAEILNAHGSLNDIFVAEITPGDFASETDLRTFVRHLCDRGGTFG
Ga0187859_101480453	3300018047	Peatland	MAEILNAHGSRNDIFVVPMRPRDFAQPDLHAFVRHLCDRNGPLG
Ga0187772_109418971	3300018085	Tropical Peatland	MAEILNVHGSRNDIFVTALTPGDFAGAWDLGAFVRNLCDRGGPFGGDGVYFYDAGRPVPE
Ga0173482_102587111	3300019361	Soil	VAEVLNAHGSKNDIFVASMTPRDFASDAGLRTFVRRLCDRAGPFGGDGIYFYDAAPPVPEAW
Ga0187768_11107721	3300020150	Tropical Peatland	MAEILNAHGSKNDIFVTPLTPADFAAEADLRAFVRNL
Ga0210399_113172492	3300020581	Soil	VAEILNAHGSKNDIFVVPMTPRDFASDEDLRGFVRRL
Ga0210393_100966241	3300021401	Soil	MAEILSAHGSRNDIFVTALTPADFASDADLRAFVRNVCDRG
Ga0210393_106107541	3300021401	Soil	MAEILNAHGSLNDIFVVELTPGDFASETDLRAFVRSLCDR
Ga0210397_115068542	3300021403	Soil	MAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRAGPFG
Ga0210387_111920381	3300021405	Soil	MAEILNAHGSLNDIFVAELTPGDFASDTDLRAFVRNLCDR
Ga0210398_100863924	3300021477	Soil	MAEILNAHGSKNDIFVAAMTPRDFASGDDLRAFVRRLCDWGGPFGGDGVY
Ga0126371_112849051	3300021560	Tropical Forest Soil	VVEILNAHGSKNDIFVAAMTPRDFASADDLRAFVR
Ga0224541_10087102	3300022521	Soil	MAEILNAHGSLNDIFVAELTPGDFASETDLGTFVRHL
Ga0247676_10085243	3300024249	Soil	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRR
Ga0207692_104986451	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGPFG
Ga0207699_103489352	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAEILNAHGSRNDIFVVPMTPRDFASDGELRAFVQRLCDR
Ga0207654_100827941	3300025911	Corn Rhizosphere	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVR
Ga0207700_111949162	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VAEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRLCDRAGPFGGD
Ga0207691_101890681	3300025940	Miscanthus Rhizosphere	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGSFGGDGIY
Ga0207648_101929581	3300026089	Miscanthus Rhizosphere	VAEILNAHGSKNDIFVAAMTPRDFASAEDLRAFVRRLCD
Ga0207698_116416662	3300026142	Corn Rhizosphere	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRA
Ga0209474_104813772	3300026550	Soil	VVGILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRR
Ga0208986_10243451	3300027031	Forest Soil	VAEILNAHGSKNDIFVAAMTPRDFASDAGLRAFVRRLCDRAGPFGGD
Ga0209111_10136171	3300027058	Forest Soil	VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGPFGGDGI
Ga0208366_10319881	3300027073	Forest Soil	VAEILNAHGSKNDIFVVAMTPRDFAAEDDLRAFVRRL
Ga0209114_10193942	3300027504	Forest Soil	VAEILNAHGSKNDIFVAAMTPRDFASGAELEAFVRHLCDRAG
Ga0209221_10064905	3300027609	Forest Soil	MTEILNAHGSLNDIFVAELTPGDFASETDLRTFVRHLCDRGG
Ga0209530_10990162	3300027692	Forest Soil	MAEILNAHGSRNDIFVAAMTPRDFASETGLRAFVR
Ga0209139_102241821	3300027795	Bog Forest Soil	MAGILNAHGSKNDIFVAAMTPRDFASDDDLRGFVRRLC
Ga0209811_104347751	3300027821	Surface Soil	VAEILNAHGSKNDIFVAAMTPRDFASDAGLRAFVRRLCDRAGPFGGDGIY
Ga0209169_103675771	3300027879	Soil	MAEILKAHGSRNDIFIVPLTPADFQTDADLRVFVRAVCDRS
Ga0209380_103513812	3300027889	Soil	MTEILNAHGSRNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGG
Ga0209415_110130671	3300027905	Peatlands Soil	MAEILNAHGSLNDIFVAEFTPGDFASEADLRAFVRS
Ga0302220_101771492	3300028742	Palsa	MTEILNAHGSKNDIFVAAMAPRDFASEADLQAFVRRL
Ga0302220_103534321	3300028742	Palsa	MAEILNAHGSKNDIFVAAMTPRDFASEAELAAFVRH
Ga0302219_102456812	3300028747	Palsa	MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRLCDRNGPFGGDGIYFYDAGP
Ga0302228_100861731	3300028808	Palsa	MTEILNAHGSRNDIFVAAMPPRDFASEADLQAFVRRLCDR
Ga0311340_101930911	3300029943	Palsa	MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDA
Ga0311352_106080022	3300029944	Palsa	MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVPE
Ga0311338_109135042	3300030007	Palsa	MTEILSAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVPEAW
Ga0311338_117860691	3300030007	Palsa	MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGER
Ga0302178_100720681	3300030013	Palsa	MTEILNAHGSKNDTFVAAMAPRDFASEADVQAFVR
Ga0302181_100126726	3300030056	Palsa	MTEILSAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFY
Ga0302179_105422141	3300030058	Palsa	MAEILNAHGSKNDIFVAAMTPRGFASEAELAAFVRHLCDRSGPF
Ga0311353_100275161	3300030399	Palsa	MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRLCDRNGPFGGDGIYFYDAG
Ga0302183_104185691	3300030509	Palsa	MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDR
Ga0311372_115874991	3300030520	Palsa	MTEILSAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVP
Ga0311355_100134471	3300030580	Palsa	MAEILNAHGSLNDIFVAELTPGDFASDTDLRAFVRHLCDRG
Ga0311356_110497272	3300030617	Palsa	MAEILNAHGSKNDIFVAAMTPRGFASEAELAAFVRHLGDRSGPFGGDGVYFYD
Ga0311354_110138241	3300030618	Palsa	MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNG
Ga0265753_10492431	3300030862	Soil	MAEILNAHGSKNDIFVAAMTPRDFASDDDLCAFVRRLCDR
Ga0307495_100661382	3300031199	Soil	VADILNAHGSKNDIFVAAMTPRDFASDEDLRDFVRRLCDRAGPFGGDGIYLYDAT
Ga0170824_1018450011	3300031231	Forest Soil	VAEILNAHGSKNDIFVAAMTPRDFASDEDLRVFVRRLCDRAGPFGGDGIYFY
Ga0302307_103704201	3300031233	Palsa	MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRR
Ga0302324_1000196371	3300031236	Palsa	MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVPE
Ga0318528_105263521	3300031561	Soil	MAEILNAHGSQNDIFVTALTPADFAGASDLRAFVRNVC
Ga0318561_104590721	3300031679	Soil	MAEILNAHGSLNDIFVTELTPGDFASETDLRAFVRRLCDRR
Ga0318535_105135151	3300031764	Soil	VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCD
Ga0318521_101410361	3300031770	Soil	MAEILNAHGSLNDIFVTELAPGDFASDTDLRAFVRRLCDRRGPFGGD
Ga0318523_105762272	3300031798	Soil	VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVR
Ga0318512_103187121	3300031846	Soil	VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRR
Ga0306919_110354522	3300031879	Soil	MAEILNAHGSLNDIFVTEFTPSDFASETDLRAFVRTLCDRRGPFG
Ga0306925_111486092	3300031890	Soil	MAEILNAHGSLNDIFVTELTPGDFASETDLCAFVR
Ga0310912_105207791	3300031941	Soil	VAEILNAHGSKNDIFVAAMTPRDFASADDLRAFVRWLCD
Ga0318530_104253701	3300031959	Soil	MAEILNAHGSLNDIFVTELAPGDFASDTDLRAFVRRLCDRRG
Ga0318556_107539952	3300032043	Soil	VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRA
Ga0318558_105186352	3300032044	Soil	VTEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRR
Ga0318575_105978821	3300032055	Soil	MAEILNAHGSRNDIFVTALTPGDFASETDLRTFVRNLCDRNG
Ga0318514_100696433	3300032066	Soil	MAEILNAHGSKNDIFVAAMTPRDFASGDDLRAFVRRLCDRAGPFA
Ga0318518_104181251	3300032090	Soil	MAEILNAHGSKNDIFVAAMTPRDFASADDLRAFVRRLCDRAGP
Ga0318577_104346252	3300032091	Soil	MAEILNAHGSLNDIFVTELAPGDFASDTDLRAFVRR
Ga0306920_1027482462	3300032261	Soil	MAEILNAHGSKNDIFVAAMTPRDFASDGGLRAFVRR
Ga0335085_117368142	3300032770	Soil	MTEILNAHGSKNDIFVAALTPRDFASDDDLRAFVRRLCDR
Ga0335078_110908601	3300032805	Soil	VAEILNAHGSKNDIFVAAMTPRDFASGDDLRAFVRRLCDRAGPFGGD
Ga0335083_104471141	3300032954	Soil	MAEILNAHGSKNDIFVVAMTPRDFASGDDLRAFVRRLCDRAGPFGGD
Ga0335076_109464192	3300032955	Soil	MAEILNAHGSKNDIFVAAMTPRDFASEEDLRAFVRRLCDRAGPFGG
Ga0335077_101767391	3300033158	Soil	MAEILNAHGSRNDIFVTALTPGDFASETDLRRFVRNLCDR
Ga0318519_102379351	3300033290	Soil	MAEILNAHGSLNDIFVTELTPGDFASETDLRAFVRRLCDRRGPFGGDGV

Protein ID

Sample Taxon ID

Habitat

Sequence

JGIcombinedJ51221_100632732

3300003505

Forest Soil

MAEILNAHGSLNDIFVTALTPGDFASDADLRAFVRNLCDRHGPFGG

Ga0062389_1035295482

3300004092

Bog Forest Soil

MAEILNAHGSKNDIFVAAMTPCDFASQADLRAFVTHLCDRSGP

Ga0062388_1027845261

3300004635

Bog Forest Soil

MAEILNAHGSKNDIFVAAMTPCDFASQADLRAFVTHLCDR

Ga0070714_1015902791

3300005435

Agricultural Soil

MAEILNAHGSRNDIFVVPMTPRDFASDGELRAFVKRLCDRAGPFGGD

Ga0070733_101413361

3300005541

Surface Soil

MAEILNAHGSLNDIFVAELTPGDFASETDLRAFVRNLCDRGGPF

Ga0068851_100194835

3300005834

Corn Rhizosphere

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFARRLCDRAGPFGGDGIYLYDAAPPIP

Ga0066696_108415991

3300006032

Soil

VVGILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRA

Ga0066652_1009289531

3300006046

Soil

VAEILNAHGSKNDIFVAEMTPGDFASDEDLRAFVRRLCDRA

Ga0074060_100189781

3300006604

Soil

VAEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRLCDR

Ga0066665_102046041

3300006796

Soil

VAEILNAHGSKNDIFVVPMRPRDFASDDDLRAFVRRL

Ga0079221_108295082

3300006804

Agricultural Soil

VAEILNAHGSRNDIFVAAMTPRDFASDEDLRAFVRRLCDRAGPFGGD

Ga0079219_124151581

3300006954

Agricultural Soil

VAEILNAYGSKNDIFVAAMTPRDFATDEDLRAFVRRLCDRAGPFGG

Ga0099827_101307521

3300009090

Vadose Zone Soil

MAGILNAHGSKNDIFVVAMTPRDFASDDELRAFVRRLCDRNGPFGGDGV

Ga0127503_105794901

3300010154

Soil

VAEILNAHGSKNDIFVTAMTPRDFASDAGLRAFVRRL

Ga0134086_103783412

3300010323

Grasslands Soil

VAEILNAHGSKNDIFVAAMTPRDFASDAGLRAFVRRLCD

Ga0074045_101066451

3300010341

Bog Forest Soil

MAEILNAHGSKNDIFVVAMTPRDFASGADLRAFVRR

Ga0126376_103470583

3300010359

Tropical Forest Soil

VAEILNAHGSKNDIFVAAMTPRDFASADDLRSFVRRLCDRAGPFGGDGIYFYD

Ga0126372_105632941

3300010360

Tropical Forest Soil

VVEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRVCDRAGPFGGDGI

Ga0126379_117071072

3300010366

Tropical Forest Soil

MAEILNAHGSKNDIFVAAMTPRDFASADDLRGFVRRLCDRAGPFGGDGIYFY

Ga0134121_100980804

3300010401

Terrestrial Soil

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGPFGGDGIY

Ga0137378_108529861

3300012210

Vadose Zone Soil

VVGILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRR

Ga0137367_100405011

3300012353

Vadose Zone Soil

VAEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVR

Ga0157337_10261012

3300012483

Arabidopsis Rhizosphere

VAEILNAHGSKNDIFVAAMTPRDFATDEDLRAFVRRLCDRAGPFGGDGIY

Ga0157350_10089811

3300012499

Unplanted Soil

VAEILNAHGSKNDIFVAAMTPRDFASDEALRAFVRRL

Ga0134081_102967772

3300014150

Grasslands Soil

VVGILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRLCDRAGPFGGDGIY

Ga0182018_107463792

3300014489

Palsa

MAEILSAHGSRNDIFVAAMTPRDFASEAGLRAFVRNLGDRDGPFGGDGIYFYDA

Ga0181525_106133101

3300014654

Bog

VAEILNAHGSKNDIFVAAMTPRDFASEAELAAFVRHLCDRGGPFGGD

Ga0132256_1028841592

3300015372

Arabidopsis Rhizosphere

MAEILNAHGSKNDIFVAAMRPRDFASSDDLRSFVRRLCDRAGPFGGDGIYFYDA

Ga0187814_103634121

3300017932

Freshwater Sediment

MAEILNAHGSMNDIFLMARTPYDFASDADVHAFVRHLCDRAGPFGGD

Ga0187777_102702211

3300017974

Tropical Peatland

VAEILNAHGSKNDIFVAAMTPRDFASGDDLRDFVRRLCDRAGPFGGDGIYFYDAGPRVPE

Ga0187863_104952151

3300018034

Peatland

MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRL

Ga0187855_107265371

3300018038

Peatland

MAEILNAHGSLNDIFVAEITPGDFASETDLRTFVRHLCDRGGTFG

Ga0187859_101480453

3300018047

Peatland

MAEILNAHGSRNDIFVVPMRPRDFAQPDLHAFVRHLCDRNGPLG

Ga0187772_109418971

3300018085

Tropical Peatland

MAEILNVHGSRNDIFVTALTPGDFAGAWDLGAFVRNLCDRGGPFGGDGVYFYDAGRPVPE

Ga0173482_102587111

3300019361

Soil

VAEVLNAHGSKNDIFVASMTPRDFASDAGLRTFVRRLCDRAGPFGGDGIYFYDAAPPVPEAW

Ga0187768_11107721

3300020150

Tropical Peatland

MAEILNAHGSKNDIFVTPLTPADFAAEADLRAFVRNL

Ga0210399_113172492

3300020581

Soil

VAEILNAHGSKNDIFVVPMTPRDFASDEDLRGFVRRL

Ga0210393_100966241

3300021401

Soil

MAEILSAHGSRNDIFVTALTPADFASDADLRAFVRNVCDRG

Ga0210393_106107541

3300021401

Soil

MAEILNAHGSLNDIFVVELTPGDFASETDLRAFVRSLCDR

Ga0210397_115068542

3300021403

Soil

MAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRAGPFG

Ga0210387_111920381

3300021405

Soil

MAEILNAHGSLNDIFVAELTPGDFASDTDLRAFVRNLCDR

Ga0210398_100863924

3300021477

Soil

MAEILNAHGSKNDIFVAAMTPRDFASGDDLRAFVRRLCDWGGPFGGDGVY

Ga0126371_112849051

3300021560

Tropical Forest Soil

VVEILNAHGSKNDIFVAAMTPRDFASADDLRAFVR

Ga0224541_10087102

3300022521

Soil

MAEILNAHGSLNDIFVAELTPGDFASETDLGTFVRHL

Ga0247676_10085243

3300024249

Soil

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRR

Ga0207692_104986451

3300025898

Corn, Switchgrass And Miscanthus Rhizosphere

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGPFG

Ga0207699_103489352

3300025906

Corn, Switchgrass And Miscanthus Rhizosphere

MAEILNAHGSRNDIFVVPMTPRDFASDGELRAFVQRLCDR

Ga0207654_100827941

3300025911

Corn Rhizosphere

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVR

Ga0207700_111949162

3300025928

Corn, Switchgrass And Miscanthus Rhizosphere

VAEILNAHGSKNDIFVAAMTPRDFASDEDLRAFVRRLCDRAGPFGGD

Ga0207691_101890681

3300025940

Miscanthus Rhizosphere

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGSFGGDGIY

Ga0207648_101929581

3300026089

Miscanthus Rhizosphere

VAEILNAHGSKNDIFVAAMTPRDFASAEDLRAFVRRLCD

Ga0207698_116416662

3300026142

Corn Rhizosphere

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRA

Ga0209474_104813772

3300026550

Soil

VVGILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRR

Ga0208986_10243451

3300027031

Forest Soil

VAEILNAHGSKNDIFVAAMTPRDFASDAGLRAFVRRLCDRAGPFGGD

Ga0209111_10136171

3300027058

Forest Soil

VAEILNAHGSKNDIFIAAMTPRDFASDAGLRAFVRRLCDRAGPFGGDGI

Ga0208366_10319881

3300027073

Forest Soil

VAEILNAHGSKNDIFVVAMTPRDFAAEDDLRAFVRRL

Ga0209114_10193942

3300027504

Forest Soil

VAEILNAHGSKNDIFVAAMTPRDFASGAELEAFVRHLCDRAG

Ga0209221_10064905

3300027609

Forest Soil

MTEILNAHGSLNDIFVAELTPGDFASETDLRTFVRHLCDRGG

Ga0209530_10990162

3300027692

Forest Soil

MAEILNAHGSRNDIFVAAMTPRDFASETGLRAFVR

Ga0209139_102241821

3300027795

Bog Forest Soil

MAGILNAHGSKNDIFVAAMTPRDFASDDDLRGFVRRLC

Ga0209811_104347751

3300027821

Surface Soil

VAEILNAHGSKNDIFVAAMTPRDFASDAGLRAFVRRLCDRAGPFGGDGIY

Ga0209169_103675771

3300027879

Soil

MAEILKAHGSRNDIFIVPLTPADFQTDADLRVFVRAVCDRS

Ga0209380_103513812

3300027889

Soil

MTEILNAHGSRNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGG

Ga0209415_110130671

3300027905

Peatlands Soil

MAEILNAHGSLNDIFVAEFTPGDFASEADLRAFVRS

Ga0302220_101771492

3300028742

Palsa

MTEILNAHGSKNDIFVAAMAPRDFASEADLQAFVRRL

Ga0302220_103534321

3300028742

Palsa

MAEILNAHGSKNDIFVAAMTPRDFASEAELAAFVRH

Ga0302219_102456812

3300028747

Palsa

MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRLCDRNGPFGGDGIYFYDAGP

Ga0302228_100861731

3300028808

Palsa

MTEILNAHGSRNDIFVAAMPPRDFASEADLQAFVRRLCDR

Ga0311340_101930911

3300029943

Palsa

MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDA

Ga0311352_106080022

3300029944

Palsa

MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVPE

Ga0311338_109135042

3300030007

Palsa

MTEILSAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVPEAW

Ga0311338_117860691

3300030007

Palsa

MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGER

Ga0302178_100720681

3300030013

Palsa

MTEILNAHGSKNDTFVAAMAPRDFASEADVQAFVR

Ga0302181_100126726

3300030056

Palsa

MTEILSAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFY

Ga0302179_105422141

3300030058

Palsa

MAEILNAHGSKNDIFVAAMTPRGFASEAELAAFVRHLCDRSGPF

Ga0311353_100275161

3300030399

Palsa

MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRLCDRNGPFGGDGIYFYDAG

Ga0302183_104185691

3300030509

Palsa

MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDR

Ga0311372_115874991

3300030520

Palsa

MTEILSAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVP

Ga0311355_100134471

3300030580

Palsa

MAEILNAHGSLNDIFVAELTPGDFASDTDLRAFVRHLCDRG

Ga0311356_110497272

3300030617

Palsa

MAEILNAHGSKNDIFVAAMTPRGFASEAELAAFVRHLGDRSGPFGGDGVYFYD

Ga0311354_110138241

3300030618

Palsa

MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRRLCDRNG

Ga0265753_10492431

3300030862

Soil

MAEILNAHGSKNDIFVAAMTPRDFASDDDLCAFVRRLCDR

Ga0307495_100661382

3300031199

Soil

VADILNAHGSKNDIFVAAMTPRDFASDEDLRDFVRRLCDRAGPFGGDGIYLYDAT

Ga0170824_1018450011

3300031231

Forest Soil

VAEILNAHGSKNDIFVAAMTPRDFASDEDLRVFVRRLCDRAGPFGGDGIYFY

Ga0302307_103704201

3300031233

Palsa

MTEILNAHGSKNDIFVAAMPPRDFASEADLQAFVRR

Ga0302324_1000196371

3300031236

Palsa

MTEILNAHGSKNDIFVAAMPPRDFTSEADLQAFVRRLCDRNGPFGGDGIYFYDAGPRVPE

Ga0318528_105263521

3300031561

Soil

MAEILNAHGSQNDIFVTALTPADFAGASDLRAFVRNVC

Ga0318561_104590721

3300031679

Soil

MAEILNAHGSLNDIFVTELTPGDFASETDLRAFVRRLCDRR

Ga0318535_105135151

3300031764

Soil

VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCD

Ga0318521_101410361

3300031770

Soil

MAEILNAHGSLNDIFVTELAPGDFASDTDLRAFVRRLCDRRGPFGGD

Ga0318523_105762272

3300031798

Soil

VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVR

Ga0318512_103187121

3300031846

Soil

VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRR

Ga0306919_110354522

3300031879

Soil

MAEILNAHGSLNDIFVTEFTPSDFASETDLRAFVRTLCDRRGPFG

Ga0306925_111486092

3300031890

Soil

MAEILNAHGSLNDIFVTELTPGDFASETDLCAFVR

Ga0310912_105207791

3300031941

Soil

VAEILNAHGSKNDIFVAAMTPRDFASADDLRAFVRWLCD

Ga0318530_104253701

3300031959

Soil

MAEILNAHGSLNDIFVTELAPGDFASDTDLRAFVRRLCDRRG

Ga0318556_107539952

3300032043

Soil

VAEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRRLCDRA

Ga0318558_105186352

3300032044

Soil

VTEILNAHGSKNDIFVAAMTPRDFASDDDLRAFVRR

Ga0318575_105978821

3300032055

Soil

MAEILNAHGSRNDIFVTALTPGDFASETDLRTFVRNLCDRNG

Ga0318514_100696433

3300032066

Soil

MAEILNAHGSKNDIFVAAMTPRDFASGDDLRAFVRRLCDRAGPFA

Ga0318518_104181251

3300032090

Soil

MAEILNAHGSKNDIFVAAMTPRDFASADDLRAFVRRLCDRAGP

Ga0318577_104346252

3300032091

Soil

MAEILNAHGSLNDIFVTELAPGDFASDTDLRAFVRR

Ga0306920_1027482462

3300032261

Soil

MAEILNAHGSKNDIFVAAMTPRDFASDGGLRAFVRR

Ga0335085_117368142

3300032770

Soil

MTEILNAHGSKNDIFVAALTPRDFASDDDLRAFVRRLCDR

Ga0335078_110908601

3300032805

Soil

VAEILNAHGSKNDIFVAAMTPRDFASGDDLRAFVRRLCDRAGPFGGD

Ga0335083_104471141

3300032954

Soil

MAEILNAHGSKNDIFVVAMTPRDFASGDDLRAFVRRLCDRAGPFGGD

Ga0335076_109464192

3300032955

Soil

MAEILNAHGSKNDIFVAAMTPRDFASEEDLRAFVRRLCDRAGPFGG

Ga0335077_101767391

3300033158

Soil

MAEILNAHGSRNDIFVTALTPGDFASETDLRRFVRNLCDR

Ga0318519_102379351

3300033290

Soil

MAEILNAHGSLNDIFVTELTPGDFASETDLRAFVRRLCDRRGPFGGDGV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters