NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088837

Metagenome / Metatranscriptome Family F088837

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088837
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 42 residues
Representative Sequence LVVPPETPHGFRNTGDGPLLVVSVHESGTLQQTFLGEEPA
Number of Associated Samples 105
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 11.01 %
% of genes near scaffold ends (potentially truncated) 88.07 %
% of genes from short scaffolds (< 2000 bps) 95.41 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.991 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.679 % of family members)
Environment Ontology (ENVO) Unclassified
(31.193 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.284 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF07883Cupin_2 10.09
PF00501AMP-binding 6.42
PF00561Abhydrolase_1 5.50
PF00850Hist_deacetyl 3.67
PF03795YCII 2.75
PF07237DUF1428 2.75
PF12704MacB_PCD 2.75
PF12840HTH_20 2.75
PF12697Abhydrolase_6 2.75
PF13147Obsolete Pfam Family 1.83
PF02518HATPase_c 1.83
PF07478Dala_Dala_lig_C 1.83
PF09992NAGPA 1.83
PF00196GerE 1.83
PF02515CoA_transf_3 0.92
PF10604Polyketide_cyc2 0.92
PF13193AMP-binding_C 0.92
PF08530PepX_C 0.92
PF01266DAO 0.92
PF07730HisKA_3 0.92
PF00916Sulfate_transp 0.92
PF02796HTH_7 0.92
PF00296Bac_luciferase 0.92
PF02535Zip 0.92
PF13460NAD_binding_10 0.92
PF10094DUF2332 0.92
PF13594Obsolete Pfam Family 0.92
PF01609DDE_Tnp_1 0.92
PF03459TOBE 0.92
PF04542Sigma70_r2 0.92
PF13699DUF4157 0.92
PF00903Glyoxalase 0.92
PF13376OmdA 0.92
PF06202GDE_C 0.92
PF01564Spermine_synth 0.92
PF12802MarR_2 0.92
PF00581Rhodanese 0.92
PF01979Amidohydro_1 0.92
PF03950tRNA-synt_1c_C 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 7.34
COG5507Uncharacterized conserved protein YbaA, DUF1428 familyFunction unknown [S] 2.75
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 2.75
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.92
COG0008Glutamyl- or glutaminyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.92
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.92
COG5421TransposaseMobilome: prophages, transposons [X] 0.92
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.92
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.92
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.92
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.92
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.92
COG3408Glycogen debranching enzyme (alpha-1,6-glucosidase)Carbohydrate transport and metabolism [G] 0.92
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.92
COG3293TransposaseMobilome: prophages, transposons [X] 0.92
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.92
COG2936Predicted acyl esteraseGeneral function prediction only [R] 0.92
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 0.92
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 0.92
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.92
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.92
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.92
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.92
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 0.92
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.92
COG0428Zinc transporter ZupTInorganic ion transport and metabolism [P] 0.92

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.99 %
UnclassifiedrootN/A11.01 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459007|GKWS7RC02F4DY9Not Available519Open in IMG/M
2170459009|GA8DASG02IB5CKAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
2189573003|GZIR7W402GZVFRAll Organisms → cellular organisms → Bacteria500Open in IMG/M
3300004081|Ga0063454_101740888All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300004114|Ga0062593_101855412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria664Open in IMG/M
3300004157|Ga0062590_100369689All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300004479|Ga0062595_101467031All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300004479|Ga0062595_102535699All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300004643|Ga0062591_101023212All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300005179|Ga0066684_10570625All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300005330|Ga0070690_100173834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1484Open in IMG/M
3300005341|Ga0070691_11065859All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005347|Ga0070668_101077634All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300005353|Ga0070669_100727845All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300005355|Ga0070671_100319025All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300005364|Ga0070673_100850574All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300005434|Ga0070709_11694074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta516Open in IMG/M
3300005438|Ga0070701_10753600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria660Open in IMG/M
3300005535|Ga0070684_100623232All Organisms → cellular organisms → Bacteria → Proteobacteria1003Open in IMG/M
3300005543|Ga0070672_102103748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300005587|Ga0066654_10270756All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae901Open in IMG/M
3300005616|Ga0068852_100543218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1162Open in IMG/M
3300005764|Ga0066903_100697184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1789Open in IMG/M
3300005764|Ga0066903_102587004All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300005841|Ga0068863_101569239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria667Open in IMG/M
3300006028|Ga0070717_11371647All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300006046|Ga0066652_101451032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300006048|Ga0075363_100973256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria522Open in IMG/M
3300006606|Ga0074062_12928950All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300006806|Ga0079220_11734191All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300006845|Ga0075421_101040392All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300006969|Ga0075419_11455475All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009093|Ga0105240_11295873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria768Open in IMG/M
3300009098|Ga0105245_10887454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta933Open in IMG/M
3300009147|Ga0114129_12725751Not Available588Open in IMG/M
3300009148|Ga0105243_11621058All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300009174|Ga0105241_12610187All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300009553|Ga0105249_10222197All Organisms → cellular organisms → Bacteria1859Open in IMG/M
3300009789|Ga0126307_10427693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1068Open in IMG/M
3300009789|Ga0126307_10768118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia778Open in IMG/M
3300010037|Ga0126304_10761029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia geojensis656Open in IMG/M
3300010038|Ga0126315_10422186All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300010041|Ga0126312_11149736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300010375|Ga0105239_11502725All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300010376|Ga0126381_103602316Not Available607Open in IMG/M
3300010399|Ga0134127_12217679All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300011991|Ga0120153_1088385Not Available506Open in IMG/M
3300012093|Ga0136632_10458835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria570Open in IMG/M
3300012200|Ga0137382_10794168All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria681Open in IMG/M
3300012201|Ga0137365_11118037All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300012929|Ga0137404_11751214Not Available577Open in IMG/M
3300012951|Ga0164300_10325250All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300012984|Ga0164309_10542164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales898Open in IMG/M
3300013306|Ga0163162_11077206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria910Open in IMG/M
3300013307|Ga0157372_13258338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria517Open in IMG/M
3300015077|Ga0173483_10068324All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300015371|Ga0132258_13350431Not Available1101Open in IMG/M
3300018028|Ga0184608_10365280All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300018051|Ga0184620_10126702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria810Open in IMG/M
3300018061|Ga0184619_10485058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia → Devosia geojensis547Open in IMG/M
3300018066|Ga0184617_1014010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1670Open in IMG/M
3300018072|Ga0184635_10418813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300018432|Ga0190275_11160675All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300018432|Ga0190275_12129376All Organisms → cellular organisms → Bacteria → Terrabacteria group639Open in IMG/M
3300018468|Ga0066662_11976177All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300019377|Ga0190264_10795516All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300021478|Ga0210402_10624756All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300025899|Ga0207642_10441566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09786Open in IMG/M
3300025908|Ga0207643_10079654All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD00171896Open in IMG/M
3300025911|Ga0207654_10149716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1497Open in IMG/M
3300025919|Ga0207657_11033413All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300025924|Ga0207694_10061607All Organisms → cellular organisms → Bacteria2920Open in IMG/M
3300025931|Ga0207644_11771033All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300025932|Ga0207690_11309753All Organisms → cellular organisms → Bacteria → Terrabacteria group605Open in IMG/M
3300025936|Ga0207670_11170927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria650Open in IMG/M
3300025945|Ga0207679_10084809All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2432Open in IMG/M
3300026088|Ga0207641_12314350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300026142|Ga0207698_10417327All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300026552|Ga0209577_10236923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1382Open in IMG/M
3300027761|Ga0209462_10124045All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300027765|Ga0209073_10162332All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales831Open in IMG/M
3300027775|Ga0209177_10432878All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia534Open in IMG/M
3300027907|Ga0207428_10922084All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300027909|Ga0209382_11877141All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300028589|Ga0247818_11267508Not Available528Open in IMG/M
3300028592|Ga0247822_10845628All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300028710|Ga0307322_10095139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria762Open in IMG/M
3300028722|Ga0307319_10254080All Organisms → cellular organisms → Bacteria → Terrabacteria group579Open in IMG/M
3300028784|Ga0307282_10603334Not Available532Open in IMG/M
3300028791|Ga0307290_10084566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1154Open in IMG/M
3300028796|Ga0307287_10165949All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300028809|Ga0247824_11009572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea527Open in IMG/M
3300028828|Ga0307312_10503554Not Available799Open in IMG/M
3300028875|Ga0307289_10031999All Organisms → cellular organisms → Bacteria2074Open in IMG/M
3300028881|Ga0307277_10009309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3781Open in IMG/M
3300028889|Ga0247827_10447830Not Available796Open in IMG/M
3300031152|Ga0307501_10169006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia606Open in IMG/M
3300031543|Ga0318516_10420093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia770Open in IMG/M
3300031770|Ga0318521_10354632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria870Open in IMG/M
3300031824|Ga0307413_12003246All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031854|Ga0310904_10711024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria696Open in IMG/M
3300031938|Ga0308175_102324211Not Available601Open in IMG/M
3300031995|Ga0307409_100141515Not Available2074Open in IMG/M
3300032005|Ga0307411_11429898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium634Open in IMG/M
3300032180|Ga0307471_104253165All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300033412|Ga0310810_10747095All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300033433|Ga0326726_11453979All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300033551|Ga0247830_11489525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria541Open in IMG/M
3300034090|Ga0326723_0239716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria807Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.42%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.59%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.67%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.67%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.75%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.75%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.75%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.83%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.83%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.92%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.92%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.92%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.92%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.92%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459007Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cmEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
2189573003Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011991Permafrost microbial communities from Nunavut, Canada - A34_65cm_12MEnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027761Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
L02_050818702170459007Grass SoilPPETLHGFRNLGEEPLLVVSVHEAPAIVQHFTDREPA
F47_111534702170459009Grass SoilVELEPDHVLVVPALTPHGFRNVGEKPLLVVSVHESGVLDQTFLGIEPA
FE2_050886102189573003Grass SoilAIELGPEGMLVVPPDTPHGFRNVGDVPLLVVSVHERGTLRQTWLGREPA
Ga0063454_10174088823300004081SoilIVPPNTPHGFRNTGASPLLVVSVHESGTLDQTFLGEEPA*
Ga0062593_10185541213300004114SoilVTEAEPDTVIVVPPETLHGFRNIGEEPLLVVSVHESGTLDQTFTDREPA*
Ga0062590_10036968913300004157SoilGRARAGGHAVVPPDTPHGFRNIADVPLLVVSVHERGTLRQTWLGEDPA*
Ga0062595_10146703123300004479SoilPNQMLVVPADTPHGFRNVGDVPLLVVTVHESGRLEQTFLGKEPA*
Ga0062595_10253569923300004479SoilLVPERILVVPANTPHGFRNVGKDPLLVVSVHESGTLEQTFLGREPA*
Ga0062591_10102321223300004643SoilQVLVVPPETPHGFRNTGDRPLLVVSIHESGTLEQTFVGGEPA*
Ga0066684_1057062523300005179SoilQMLVVPPETPHGFRNTGEQSLLVVSVHESGTLEQTFLGRDPL*
Ga0070690_10017383433300005330Switchgrass RhizosphereVVPPDTPHGFRNTGETPLLLFSVHDSGTLEQTFTGDEPA*
Ga0070691_1106585923300005341Corn, Switchgrass And Miscanthus RhizosphereGPDTVIVVPPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA*
Ga0070668_10107763423300005347Switchgrass RhizosphereMHPDQMLVVPPNTPHGFRNIGDVPLLTVSIHASGELDQTFLGVNPA*
Ga0070669_10072784513300005353Switchgrass RhizosphereLHANQMLVVPPETPHGFRNTGEEPLLVVSVHESGTLDQTFLGRDPD*
Ga0070671_10031902533300005355Switchgrass RhizosphereANQMLVVPPETPHGFRNTGEEPLLVVSVHESGTLDQTFLG*
Ga0070673_10085057413300005364Switchgrass RhizosphereIVVPPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA*
Ga0070709_1169407413300005434Corn, Switchgrass And Miscanthus RhizosphereMLVVPPETPHGFRNIGEVPLLLVTVHESGTLQQTFLGVEPA*
Ga0070701_1075360023300005438Corn, Switchgrass And Miscanthus RhizosphereLVVPPDTPHGFRNTGETPLLLFSVHDSGTLEQTFTGDEPA*
Ga0070684_10062323213300005535Corn RhizosphereQMLVVPPETPHGFRNTGDGPLLVVSVHEAATLEQTFLGEEPA*
Ga0070672_10210374813300005543Miscanthus RhizosphereTLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA*
Ga0066654_1027075623300005587SoilPETPHGFRNTGDGPLLVVSVHEAGTLQQTFLGAEPDDV*
Ga0068852_10054321823300005616Corn RhizosphereVPPETPHGFRNTGGGPLLVVSVHEAGTLQQTFLGEDSDEV*
Ga0066903_10069718413300005764Tropical Forest SoilPPETPHGFRNTGELPLLVVSIHESGSLEQTFLGRDPA*
Ga0066903_10258700423300005764Tropical Forest SoilNQMLVVPPETPHGFRNTGDGPLLVVSVHEAPTLQQTFLGDV*
Ga0068863_10156923913300005841Switchgrass RhizosphereSIITVPPDTLHGFRNTGREPLLLVSVHESPTLVQEFTDDEPA*
Ga0070717_1137164713300006028Corn, Switchgrass And Miscanthus RhizosphereDLNANQMLVVPPETPHGFRNTGEHPLLLVSIHESGTLEQTFLGRDPA*
Ga0066652_10145103213300006046SoilPPETLHGFRNIGEDPLLVVSVHESGTLDQTFTDREPA*
Ga0075363_10097325613300006048Populus EndospherePNTPHGFRNIGDVPLLVVSAHERGTLQQEWLGRDPA*
Ga0074062_1292895013300006606SoilANQMLVVPPDTPHGFRNTGSEPLLVVSIHAAGTLEQTFLGRDPA*
Ga0079220_1173419113300006806Agricultural SoilTVELEPEGMLVVPPDTPHGFRNVGDVPLLVVSVHERGTLRQTWLGGDPA*
Ga0075421_10104039213300006845Populus RhizosphereVIVVPPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA*
Ga0075419_1145547513300006969Populus RhizosphereTVIVVPPETLHGFRNIGEEPLLVVSVHESGTLDQTFTEQEPA*
Ga0105240_1129587313300009093Corn RhizosphereQMLVVPPETPHGFRNTGEGPLLLVSVHEGETLQQTFLDGGQ*
Ga0105245_1088745423300009098Miscanthus RhizosphereETPHGFRNTGEGPLLLVSVHEGETLQQTFLDGGQ*
Ga0114129_1272575113300009147Populus RhizosphereTLHGFRNIGDEPLLVVSVHESGTLDQTFTDDEPA*
Ga0105243_1162105833300009148Miscanthus RhizospherePPMTLHGFRNIGDEPLLVVSVHERGTLSQEFTDDPPA*
Ga0105241_1261018723300009174Corn RhizospherePETPHGFRNTGDGPLLVVSVHEAPTLDQTFLGEEPA*
Ga0105249_1022219723300009553Switchgrass RhizosphereVVPADTPHGFRNVSDERLLVVSVHEADAVQQTWLGRDPA*
Ga0126307_1042769323300009789Serpentine SoilSVFVVPPATLHGFRNIGDEPLLVVSVHESGTLDQTFTEDEPA*
Ga0126307_1076811833300009789Serpentine SoilVVPPETLHGFRNVGDEPLLVVSVHESGTLDQAFTEEEPA*
Ga0126304_1076102913300010037Serpentine SoilLVVPPETPHGFRNVGDEPLLVVSVHESGTLDQTFTEDEPA*
Ga0126315_1042218633300010038Serpentine SoilRWTAGDQVAEAGPETVIVVPPDTLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA*
Ga0126312_1114973633300010041Serpentine SoilVVPPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA*
Ga0105239_1150272523300010375Corn RhizosphereQVLVVPPETPHGFRNTGDRALLVVSVHESGTLEQTFVGGEPA*
Ga0126381_10360231613300010376Tropical Forest SoilTPHGFRNVGDDDLLVVSVHESPVLEQTFLGRDPA*
Ga0134127_1221767923300010399Terrestrial SoilVVPPETPHGFRNTGGGPLLVVSVHEAGTLQQTFLGEDSDEV*
Ga0120153_108838513300011991PermafrostANTLHGFRNIGDVPLLVVSVHESPTLIQEFLDEEPA*
Ga0136632_1045883513300012093Polar Desert SandPDTPHGFRNIGQVPLLVVSVHASGTLRQTWTGGEPA*
Ga0137382_1079416823300012200Vadose Zone SoilMLVVPPDTPHGFRNAGDVPLLVVSVHERGTLRQTWLGRDPA*
Ga0137365_1111803723300012201Vadose Zone SoilMELHANQMLVVPPQTPHGFWNTGEHPLLVVSIHVSGTLEQRLFGRDPA*
Ga0137404_1175121413300012929Vadose Zone SoilTPHGFRNTGTTPLLVVSVHESGALDQTFLGVEPA*
Ga0164300_1032525013300012951SoilDLHANQMLVVPSETPHGFRTTGEEPLLVVSVHEAGTLDQTILGRDPA*
Ga0164309_1054216413300012984SoilTPHGFRNTGSEPLLVVSIHAAGTLEQTFLGRDPA*
Ga0163162_1107720623300013306Switchgrass RhizosphereMLVVPPNTPHGFRNIGDVPLLTVSIHESGEVDQTFLGVNPA*
Ga0157372_1325833813300013307Corn RhizosphereGRWTAGGQVTEPREDSIVVVPPETLHGFRNIGDVPLLVVSVHESGTLDQTFTDREPA*
Ga0173483_1006832423300015077SoilMLVVPPDTPHGFRNVGEVPLLVVTVHESGTLEQEFLGVEPS*
Ga0132258_1335043113300015371Arabidopsis RhizosphereTPHGFRNTGQTPLLLVSVHESGTLEQTFLGIEPS*
Ga0184608_1036528023300018028Groundwater SedimentIELEPEQMIVVPPDTPHGFRNIGDVPLLVVSMHERGTLRQTWLGEEPA
Ga0184620_1012670223300018051Groundwater SedimentMIVVPPDTPHGFRNVGDVALLVVSVHERGTLRQTWLGEDPA
Ga0184619_1048505813300018061Groundwater SedimentELEPEDMIVVPPDTPHGFRNVGDVALLVVSVHERGTLRQTWLGEDPA
Ga0184617_101401033300018066Groundwater SedimentRDEETVELQPEGMLVVPPATPHGFRNVGHVPLLVVSVHERGTLRQTWLGADPA
Ga0184635_1041881323300018072Groundwater SedimentELEPEGMLVVPPDTPHGFRNIGDVALLVVSVHERGTLRQTWLGEEPA
Ga0190275_1116067513300018432SoilMIVVPPDTPHGFRNIGDVPLLVVSAHDSGTLEQTWLDREPA
Ga0190275_1212937623300018432SoilPDTPHGFRNIGDVPLLVVSVHESGTMRQEWLGEEPA
Ga0066662_1197617713300018468Grasslands SoilLVVPPDTPHGFRNTGDVPLLVVSVHERGTLRQTWLGREPA
Ga0190264_1079551613300019377SoilMAVAPPETLHGFRNIGDVPLLVVSVHDRGTLSQDFTDDAPA
Ga0210402_1062475613300021478SoilMLVVPPETPHGFRNIGEEPLLVVSVHESGTVQQTFLGRDPA
Ga0207642_1044156613300025899Miscanthus RhizosphereMHPDQMLVVPPNTPHGFRNIGDVPLLTVSIHASGELDQTFLGVNPA
Ga0207643_1007965413300025908Miscanthus RhizosphereMTLHGFRNIGDEPLLVVSVHERGTLSQEFTDDPPA
Ga0207654_1014971643300025911Corn RhizosphereLHANQMLVVPPETPHGFRNTGEEPLLVVSVHESGTLDQTFLGRDPA
Ga0207657_1103341313300025919Corn RhizosphereQMLVVPPETPHGFRNTGDGPLLVVSVHESGTLQQTFLGEEPA
Ga0207694_1006160713300025924Corn RhizosphereVVPPETPHGFRNTGDGPLLVVSVHESGTLQQTFLGEEPA
Ga0207644_1177103313300025931Switchgrass RhizosphereEPDGMAIAPPMTLHGFRNIGDEPLLVVSVHERGTLSQEFTDDPPA
Ga0207690_1130975313300025932Corn RhizosphereQMLVVPPETPHGFRNTGEEPLLVVSVHESGTLDQTFLGRDPD
Ga0207670_1117092723300025936Switchgrass RhizosphereVSLFTPDTPHGFRNTGETPLLLFSVHDSGTLEQTFTGDEPA
Ga0207679_1008480943300025945Corn RhizosphereQMLVVPPETPHGFRNTGDGPLLVVSVHEAPTLEQTFLGEEPA
Ga0207641_1231435023300026088Switchgrass RhizosphereDSIITVPPDTLHGFRNTGREPLLLVSVHESPTLVQEFTDDEPA
Ga0207698_1041732713300026142Corn RhizosphereLVVPPETPHGFRNTGDGPLLVVSVHESGTLQQTFLGEEPA
Ga0209577_1023692313300026552SoilDVRAERVISVPAETPHGFRNTGDAPLLVVAIHESPVLVQDFLGREPA
Ga0209462_1012404533300027761AgavePPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA
Ga0209073_1016233213300027765Agricultural SoilPNQMLVVPPETPHGFRNTGDEPLLVVSVHEAPTLQQTFLREEPA
Ga0209177_1043287823300027775Agricultural SoilADQMLVVPPETPHGFRNTGDQPLLVVSIHESGTLDQTFLGRDPA
Ga0207428_1092208413300027907Populus RhizospherePMTLHGFRNIGDEPLLVVSVHERGTLSQEFTDDPPA
Ga0209382_1187714113300027909Populus RhizosphereVIVVPPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA
Ga0247818_1126750823300028589SoilEGMLVVPPDTPHGFRNIGDVPLLLVSVHERGTLRQTWLGREPA
Ga0247822_1084562813300028592SoilGETVTELSPNQMLVVPADTPHGFRNVSDVPLLVVTVHESGTLEQTFLGKEPA
Ga0307322_1009513913300028710SoilEQMIVVPLDTPHGFRNIGDVPLLVVSMHERGTLRQTWLGEEPA
Ga0307319_1025408023300028722SoilMLVVPPETPHGFRNTGEHPLLVVSIHESGRLDQTFLGREPA
Ga0307282_1060333413300028784SoilVPPETPHGFRNTGEHPLLVVSIHESGTLDQTFLGREPA
Ga0307290_1008456613300028791SoilQPEGMLVVPPDTPHGFRNVGEVPLLVVSVHERGTLRQTWLGEDPA
Ga0307287_1016594923300028796SoilWTSGDDVVELEPEGMLVVPPDTPHGFRNIGDVALLVVSVHERGTLRQTWLGEEPA
Ga0247824_1100957223300028809SoilPETPHGFRNIGEVPLLVVSVHERGTMRQAWLGRDPE
Ga0307312_1050355413300028828SoilMLVVPPDTPHGFRNVGEVPLLVVSVHERGTLRQTWLGEDPA
Ga0307289_1003199933300028875SoilVIELEPEQMIVVPPDTPHGFRNIGDVPLLVVSMHERGTLRQTWLGEEPA
Ga0307277_1000930913300028881SoilEGMLVVPPDMPHGFRNVGEVPLLVVSVHERGTLRQTWLGEDPA
Ga0247827_1044783013300028889SoilVVPPETLHGFRNIGDEELHVLSVHESGTLEQTFTEDEPA
Ga0307501_1016900623300031152SoilLGDDEFHDIGDVPLLVVSVHERGTLRQTFLGSDRA
Ga0318516_1042009323300031543SoilLCPSQLLVVPPETPHGFRNTGDEPLLVVSVHESGTLDQTFLGRDPV
Ga0318521_1035463213300031770SoilQRLVVPPETPHGFRNIGDVPLLVVSVHEAGTVDQTWLGRDPA
Ga0307413_1200324613300031824RhizosphereAEAEPETVIVVPPETLHGFRKIGDEPLLVVSVHESGTLDQTFTEQEPA
Ga0310904_1071102423300031854SoilLEPEQILTVPPDTPHGFRNIGDVPLLVVSVHERGTMRQTWLGEEPA
Ga0308175_10232421113300031938SoilVPPDTPHGFRNISDDPLLVVSIHESGTLEQTFLGREPA
Ga0307409_10014151533300031995RhizosphereVPPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEQEPA
Ga0307411_1142989813300032005RhizosphereAVIVVPPETLHGFRNIGDEPLLVVSVHESGTLDQTFTEDEPA
Ga0307471_10425316513300032180Hardwood Forest SoilVVPALTPHGFRNIGEKPLLVVSVHESGVLDQTFLGIEPA
Ga0310810_1074709523300033412SoilPDTPHGFRNTGEQPLLVVSVHESGTLDQTFLGRDPA
Ga0326726_1145397923300033433Peat SoilWTAGDDIVDLRANQMLVVPPETPHGFLNTGADPLLVVSVHESGTLDQTFLGSDPA
Ga0247830_1148952513300033551SoilDEMIVVPPDTPHGFRNVGDVPLLVVSVHERGTLRQTWLGKDPA
Ga0326723_0239716_680_8053300034090Peat SoilMLVVPPETPHGFRNTGEQPLLVVSIHESGTLEQTFLGRDPA

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