Metagenome Family F088818

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088818
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	69 residues
Representative Sequence	MDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Number of Associated Samples	86
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	79.81 %
% of genes near scaffold ends (potentially truncated)	35.78 %
% of genes from short scaffolds (< 2000 bps)	62.39 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (40.367 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (35.780 % of family members)
Environment Ontology (ENVO)	Unclassified (79.817 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.165 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.19% β-sheet: 7.46% Coil/Unstructured: 31.34%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00239	Resolvase	51.38
PF07508	Recombinase	2.75
PF05930	Phage_AlpA	2.75
PF13384	HTH_23	0.92
PF02954	HTH_8	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	54.13
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	51.38
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	2.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.56 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	40.37 %
cellular organisms	root	All Organisms → cellular organisms	31.19 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.37 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.19 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.44 %
Unclassified	root	N/A	28.44 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.37 %
Unclassified	root	N/A	28.44 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.84 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	12.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.37 %
Unclassified	root	N/A	28.44 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	12.84 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	12.84 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.37 %
Unclassified	root	N/A	28.44 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	12.84 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.37 %
Unclassified	root	N/A	28.44 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	12.84 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.83 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.37 %
Unclassified	root	N/A	28.44 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	12.84 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.83 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10015052	All Organisms → Viruses → Predicted Viral	4738	Open in IMG/M
3300000101\|DelMOSum2010_c10019329	All Organisms → Viruses → Predicted Viral	4021	Open in IMG/M
3300000117\|DelMOWin2010_c10017274	All Organisms → cellular organisms → Bacteria	3859	Open in IMG/M
3300000117\|DelMOWin2010_c10032197	All Organisms → Viruses → Predicted Viral	2537	Open in IMG/M
3300000117\|DelMOWin2010_c10048008	All Organisms → Viruses → Predicted Viral	1907	Open in IMG/M
3300000947\|BBAY92_10187391	Not Available	539	Open in IMG/M
3300001349\|JGI20160J14292_10023415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	3400	Open in IMG/M
3300001352\|JGI20157J14317_10026997	All Organisms → Viruses → Predicted Viral	3106	Open in IMG/M
3300004097\|Ga0055584_100307294	All Organisms → Viruses → Predicted Viral	1628	Open in IMG/M
3300006026\|Ga0075478_10081255	Not Available	1043	Open in IMG/M
3300006029\|Ga0075466_1124760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	680	Open in IMG/M
3300006637\|Ga0075461_10028037	All Organisms → Viruses → Predicted Viral	1855	Open in IMG/M
3300006802\|Ga0070749_10109780	All Organisms → Viruses → Predicted Viral	1626	Open in IMG/M
3300006803\|Ga0075467_10041749	All Organisms → Viruses → Predicted Viral	2888	Open in IMG/M
3300006803\|Ga0075467_10242475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	981	Open in IMG/M
3300006810\|Ga0070754_10018533	Not Available	4129	Open in IMG/M
3300006867\|Ga0075476_10009874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	4306	Open in IMG/M
3300006869\|Ga0075477_10039524	All Organisms → Viruses → Predicted Viral	2133	Open in IMG/M
3300006874\|Ga0075475_10039326	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300006916\|Ga0070750_10041598	All Organisms → Viruses → Predicted Viral	2252	Open in IMG/M
3300006916\|Ga0070750_10043412	All Organisms → Viruses → Predicted Viral	2198	Open in IMG/M
3300006920\|Ga0070748_1030398	All Organisms → Viruses → Predicted Viral	2218	Open in IMG/M
3300006920\|Ga0070748_1057251	All Organisms → cellular organisms → Bacteria → Proteobacteria	1537	Open in IMG/M
3300006920\|Ga0070748_1122777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	978	Open in IMG/M
3300007229\|Ga0075468_10061377	All Organisms → Viruses → Predicted Viral	1254	Open in IMG/M
3300007231\|Ga0075469_10044184	All Organisms → Viruses → Predicted Viral	1365	Open in IMG/M
3300007236\|Ga0075463_10002070	All Organisms → cellular organisms → Bacteria	6801	Open in IMG/M
3300007276\|Ga0070747_1019200	All Organisms → Viruses → Predicted Viral	2800	Open in IMG/M
3300007276\|Ga0070747_1131949	Not Available	906	Open in IMG/M
3300007276\|Ga0070747_1211931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	680	Open in IMG/M
3300007344\|Ga0070745_1008131	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5140	Open in IMG/M
3300007538\|Ga0099851_1011759	All Organisms → Viruses → Predicted Viral	3578	Open in IMG/M
3300007540\|Ga0099847_1043793	All Organisms → Viruses → Predicted Viral	1418	Open in IMG/M
3300007540\|Ga0099847_1066574	All Organisms → Viruses → Predicted Viral	1118	Open in IMG/M
3300007542\|Ga0099846_1022999	All Organisms → Viruses → Predicted Viral	2416	Open in IMG/M
3300009071\|Ga0115566_10163671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1379	Open in IMG/M
3300009071\|Ga0115566_10351285	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	859	Open in IMG/M
3300009071\|Ga0115566_10786555	Not Available	524	Open in IMG/M
3300009074\|Ga0115549_1236878	Not Available	579	Open in IMG/M
3300009076\|Ga0115550_1100359	All Organisms → Viruses → Predicted Viral	1071	Open in IMG/M
3300009077\|Ga0115552_1232169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	748	Open in IMG/M
3300009172\|Ga0114995_10179497	All Organisms → Viruses → Predicted Viral	1178	Open in IMG/M
3300009423\|Ga0115548_1134079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	788	Open in IMG/M
3300009434\|Ga0115562_1258591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	605	Open in IMG/M
3300009435\|Ga0115546_1131343	Not Available	892	Open in IMG/M
3300009438\|Ga0115559_1257297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	618	Open in IMG/M
3300009440\|Ga0115561_1392430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	508	Open in IMG/M
3300009442\|Ga0115563_1336126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	545	Open in IMG/M
3300009447\|Ga0115560_1044471	All Organisms → Viruses → Predicted Viral	1998	Open in IMG/M
3300009449\|Ga0115558_1339000	Not Available	593	Open in IMG/M
3300009508\|Ga0115567_10881009	Not Available	532	Open in IMG/M
3300010368\|Ga0129324_10029374	All Organisms → Viruses → Predicted Viral	2641	Open in IMG/M
3300017697\|Ga0180120_10037908	All Organisms → Viruses → Predicted Viral	2202	Open in IMG/M
3300017824\|Ga0181552_10112385	All Organisms → Viruses → Predicted Viral	1494	Open in IMG/M
3300017950\|Ga0181607_10702027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	525	Open in IMG/M
3300018048\|Ga0181606_10067202	All Organisms → Viruses → Predicted Viral	2364	Open in IMG/M
3300018410\|Ga0181561_10040451	All Organisms → Viruses → Predicted Viral	3020	Open in IMG/M
3300018415\|Ga0181559_10090562	Not Available	1899	Open in IMG/M
3300018415\|Ga0181559_10583275	Not Available	604	Open in IMG/M
3300018416\|Ga0181553_10386519	Not Available	762	Open in IMG/M
3300018876\|Ga0181564_10024523	All Organisms → cellular organisms → Bacteria → Proteobacteria	4462	Open in IMG/M
3300018876\|Ga0181564_10171857	Not Available	1280	Open in IMG/M
3300019459\|Ga0181562_10092390	All Organisms → Viruses → Predicted Viral	1736	Open in IMG/M
3300019459\|Ga0181562_10504293	Not Available	574	Open in IMG/M
3300020165\|Ga0206125_10013798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5348	Open in IMG/M
3300020165\|Ga0206125_10056224	All Organisms → Viruses → Predicted Viral	1871	Open in IMG/M
3300020165\|Ga0206125_10243427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	687	Open in IMG/M
3300020166\|Ga0206128_1010465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6010	Open in IMG/M
3300020166\|Ga0206128_1015412	All Organisms → Viruses → Predicted Viral	4583	Open in IMG/M
3300020166\|Ga0206128_1216229	Not Available	725	Open in IMG/M
3300020182\|Ga0206129_10035191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3451	Open in IMG/M
3300020185\|Ga0206131_10172078	All Organisms → Viruses → Predicted Viral	1102	Open in IMG/M
3300020194\|Ga0181597_10109369	All Organisms → Viruses → Predicted Viral	1505	Open in IMG/M
3300020601\|Ga0181557_1235560	Not Available	650	Open in IMG/M
3300021365\|Ga0206123_10422565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	545	Open in IMG/M
3300021958\|Ga0222718_10473505	Not Available	611	Open in IMG/M
3300021959\|Ga0222716_10687264	Not Available	545	Open in IMG/M
3300022065\|Ga0212024_1106314	Not Available	500	Open in IMG/M
3300022068\|Ga0212021_1004223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	2084	Open in IMG/M
3300022164\|Ga0212022_1008819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1386	Open in IMG/M
3300022168\|Ga0212027_1023702	Not Available	830	Open in IMG/M
3300022178\|Ga0196887_1033675	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300022905\|Ga0255756_1057522	All Organisms → Viruses → Predicted Viral	2097	Open in IMG/M
3300022923\|Ga0255783_10066697	All Organisms → Viruses → Predicted Viral	2065	Open in IMG/M
3300022928\|Ga0255758_10067029	All Organisms → Viruses → Predicted Viral	2026	Open in IMG/M
3300025276\|Ga0208814_1117560	Not Available	642	Open in IMG/M
3300025570\|Ga0208660_1034215	All Organisms → Viruses → Predicted Viral	1370	Open in IMG/M
3300025621\|Ga0209504_1170603	Not Available	503	Open in IMG/M
3300025630\|Ga0208004_1008188	All Organisms → Viruses → Predicted Viral	3591	Open in IMG/M
3300025641\|Ga0209833_1164818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	568	Open in IMG/M
3300025653\|Ga0208428_1024678	All Organisms → Viruses → Predicted Viral	1958	Open in IMG/M
3300025653\|Ga0208428_1137058	Not Available	664	Open in IMG/M
3300025694\|Ga0209406_1012746	All Organisms → Viruses → Predicted Viral	4104	Open in IMG/M
3300025696\|Ga0209532_1196967	Not Available	578	Open in IMG/M
3300025759\|Ga0208899_1174950	Not Available	707	Open in IMG/M
3300025769\|Ga0208767_1032850	All Organisms → Viruses → Predicted Viral	2653	Open in IMG/M
3300025806\|Ga0208545_1063531	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300025860\|Ga0209119_1198828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	779	Open in IMG/M
3300025874\|Ga0209533_1167641	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	964	Open in IMG/M
3300025894\|Ga0209335_10192273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	946	Open in IMG/M
3300027752\|Ga0209192_10191322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	784	Open in IMG/M
3300028287\|Ga0257126_1036033	All Organisms → Viruses → Predicted Viral	2173	Open in IMG/M
3300028287\|Ga0257126_1062833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1470	Open in IMG/M
3300031519\|Ga0307488_10364687	Not Available	906	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.08%
Algae	Host-Associated → Algae	0.92%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.08%
Green Algae	Host-Associated → Algae → Green Algae	0.92%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	38.53%
Pelagic	Environmental → Aquatic → Marine → Pelagic	25.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.68%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	12.84%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.75%
Inlet	Environmental → Aquatic → Marine → Inlet	1.83%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	38.53%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	25.69%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	14.68%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	12.84%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.83%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	35.78%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	17.43%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	14.68%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	8.26%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	8.26%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	4.59%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.75%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.83%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.83%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.83%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.92%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.92%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007231	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022164	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)	Environmental	Open in IMG/M
3300022168	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022905	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025570	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025621	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511 (SPAdes)	Environmental	Open in IMG/M
3300025630	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025641	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100150525	3300000101	Marine	MRSLDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVREMLGQ*
DelMOSum2010_100193291	3300000101	Marine	MRSLDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVREMLG
DelMOWin2010_100172747	3300000117	Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG*
DelMOWin2010_100321972	3300000117	Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLDR*
DelMOWin2010_100480081	3300000117	Marine	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLG
BBAY92_101873912	3300000947	Macroalgal Surface	LLANFPAYLLPNDKKPKTNADRQKAWRDKRKSDGYEMHTIWLDPDVVQGLNRLLDGSDKPQVERTRLINDAVRAMLFSG*
JGI20160J14292_100234158	3300001349	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSERPQAERTRLINEAVRAMLDR*
JGI20157J14317_100269977	3300001352	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSERPQAERTRLINEAIRAMLDR*
Ga0055584_1003072941	3300004097	Pelagic Marine	MRSSDDPPKSNSERQKAWRNKRKADGYEMHTIWLDPDVAESLGKCLDESEKPQAERTRIINEALRGFLK*
Ga0075478_100812552	3300006026	Aqueous	RTIMRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGK*
Ga0075466_11247601	3300006029	Aqueous	MRSLSDLRDAMDKPPPKTNAQRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLDR*
Ga0075461_100280371	3300006637	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIR
Ga0070749_101097803	3300006802	Aqueous	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLGK*
Ga0075467_100417493	3300006803	Aqueous	MRSLSDLRDAMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLGK*
Ga0075467_102424754	3300006803	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAVRAMLGK*
Ga0070754_100185332	3300006810	Aqueous	MNNKKPKTNADRQKAWRDKRKSDGYEMHTVWLDPDVAQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG*
Ga0075476_100098744	3300006867	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIRKMLGAEDYG*
Ga0075477_100395243	3300006869	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGSL*
Ga0075475_100393264	3300006874	Aqueous	MNDKKPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEQLNKYLDGSEKPQAERTRLINEAVRTMLNR*
Ga0070750_100415982	3300006916	Aqueous	MNDKKPKTNADRQKAWRDKRKSDGYEMHTIWLEPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG*
Ga0070750_100434121	3300006916	Aqueous	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVR
Ga0070748_10303982	3300006920	Aqueous	MRSLDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVREMLGK*
Ga0070748_10572513	3300006920	Aqueous	MNVKEPKTNASRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG*
Ga0070748_11227771	3300006920	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNHLLDGSQKPQTERIRLINEAVRAMLGK*
Ga0075468_100613773	3300007229	Aqueous	MDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSERPQAERTRLINEAVRAMLGK*
Ga0075469_100441842	3300007231	Aqueous	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAIRAMLDR*
Ga0075463_1000207012	3300007236	Aqueous	MDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLGK*
Ga0070747_10192002	3300007276	Aqueous	LDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVREMLGQ*
Ga0070747_11319491	3300007276	Aqueous	NAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLDR
Ga0070747_12119311	3300007276	Aqueous	NAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSERPQAERTRLINEAVRAMLGK
Ga0070745_10081316	3300007344	Aqueous	MNDKKPKTNADRQKAWRDKRKSDGYEMHTVWLDPDVAQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG*
Ga0099851_10117598	3300007538	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLR*
Ga0099847_10437933	3300007540	Aqueous	MDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAM
Ga0099847_10665743	3300007540	Aqueous	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRTML
Ga0099846_10229994	3300007542	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGAEDYG*
Ga0115566_101636712	3300009071	Pelagic Marine	MDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG*
Ga0115566_103512852	3300009071	Pelagic Marine	MNDKQPKTNADRQKAWRDKHKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0115566_107865552	3300009071	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRTMLGS*
Ga0115549_12368782	3300009074	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG*
Ga0115550_11003591	3300009076	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAML
Ga0115552_12321691	3300009077	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRTMLNR*
Ga0114995_101794972	3300009172	Marine	MKSLDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVRAMLGQ*
Ga0115548_11340792	3300009423	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLDR*
Ga0115562_12585912	3300009434	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLGK
Ga0115546_11313431	3300009435	Pelagic Marine	DKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG*
Ga0115559_12572971	3300009438	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRTML
Ga0115561_13924302	3300009440	Pelagic Marine	MDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAIRVMLDR*
Ga0115563_13361262	3300009442	Pelagic Marine	MDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLV*
Ga0115560_10444711	3300009447	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSERPQAERTRLINEAIRTMLG*
Ga0115558_13390001	3300009449	Pelagic Marine	TNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0115564_101121831	3300009505	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAE
Ga0115567_108810092	3300009508	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLV*
Ga0129324_100293741	3300010368	Freshwater To Marine Saline Gradient	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAM
Ga0180120_100379085	3300017697	Freshwater To Marine Saline Gradient	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEQLNKYLDGSEKPQAERTRLINEAVRAMLDR
Ga0181552_101123851	3300017824	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEA
Ga0181607_107020271	3300017950	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGSL
Ga0181606_100672021	3300018048	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGAEDYG
Ga0181561_100404511	3300018410	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGK
Ga0181559_100905623	3300018415	Salt Marsh	MNDKKPKTNADRQKAWRDKRKSDGYEMHTVWLDPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG
Ga0181559_105832752	3300018415	Salt Marsh	MGKSKMNDKAPPKSTAERQRQWRKKRAEQGYEMHTVWLDPDVVQGLNRLLDGSEKPQAERTRLINEAVRAMLV
Ga0181553_103865192	3300018416	Salt Marsh	MNDKKPKTNADRQKAWRDKRKSDGYEMHTVWLDPDVAQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG
Ga0181564_100245234	3300018876	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAVRAMLGK
Ga0181564_101718571	3300018876	Salt Marsh	RQKAWRDKRKSDGYEMHTVWLDPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG
Ga0181562_100923904	3300019459	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAVRAVLGK
Ga0181562_105042931	3300019459	Salt Marsh	QRQWRKKRAEQGYEMHTVWLDPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG
Ga0206125_100137983	3300020165	Seawater	MNVKEPKTNASRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRTMLNR
Ga0206125_100562244	3300020165	Seawater	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLDR
Ga0206125_102434272	3300020165	Seawater	MRSLDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVREMLGQ
Ga0206128_101046510	3300020166	Seawater	RDAMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLV
Ga0206128_10154124	3300020166	Seawater	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSERPQAERTRLINEAIRAMLDR
Ga0206128_12162292	3300020166	Seawater	VRLTDGCMNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0206129_100351915	3300020182	Seawater	MRRKTMNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRTMLV
Ga0206131_101720782	3300020185	Seawater	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0181597_101093694	3300020194	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGA
Ga0181557_12355602	3300020601	Salt Marsh	MNDKKPKTNADRQKAWRDKRKSDGYEMHTVWLDPDVVQGLNRLLDGSEKPQAERTRLINEAVRAMLV
Ga0206123_104225652	3300021365	Seawater	MRSLDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVREMLGK
Ga0222718_104735051	3300021958	Estuarine Water	VNDKKPKTNADRQKAWRDKRKADGYEMHTIWLDPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLR
Ga0222716_106872641	3300021959	Estuarine Water	MRRKTMNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRTMLNR
Ga0222715_106873341	3300021960	Estuarine Water	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQA
Ga0212024_10430281	3300022065	Aqueous	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKP
Ga0212024_11063142	3300022065	Aqueous	NAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLGK
Ga0212021_10042235	3300022068	Aqueous	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLGK
Ga0212022_10088193	3300022164	Aqueous	MNVKEPKTNASRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0212027_10237022	3300022168	Aqueous	YMITFNESIQTWQRTIMRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREMLGK
Ga0196887_10336751	3300022178	Aqueous	MRSLSDLRDAMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0255756_10575221	3300022905	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAVRAM
Ga0255783_100666975	3300022923	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAVRAMLG
Ga0255758_100670295	3300022928	Salt Marsh	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIREML
Ga0208814_11175601	3300025276	Deep Ocean	MSVKEPKTNASRQKAWRDKRKADGFEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0208660_10342151	3300025570	Aqueous	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAIRAMLDR
Ga0209504_11706032	3300025621	Pelagic Marine	QCDVRLTDGGMNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLDR
Ga0208004_10081881	3300025630	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIR
Ga0209833_11648181	3300025641	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSERPQAERTRLINEAI
Ga0208428_10246784	3300025653	Aqueous	MRSSDDPPKSNSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNRLLDGSQKPQTERIRLINEAIRKMLGAEDYG
Ga0208428_11370582	3300025653	Aqueous	AKPNHADGRMNDKKPKTNADRQKAWRDKRKSDGYEMHTIWLEPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG
Ga0209406_10127464	3300025694	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG
Ga0209532_11969671	3300025696	Pelagic Marine	NDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLDR
Ga0208899_11749502	3300025759	Aqueous	NSERQKLWRDKRKAQGYEMHTIWLDPDVVQGLNHLLDGSQKPQTERIRLINEAVRAMLGK
Ga0208767_10328502	3300025769	Aqueous	MNDKKPKTNADRQKAWRDKRKSDGYEMHTIWLEPDVVQGLNRLLDGSEKPQAERTRLINDAVRAMLFSG
Ga0208545_10635313	3300025806	Aqueous	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLI
Ga0209119_11988281	3300025860	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLIN
Ga0209533_11676412	3300025874	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINE
Ga0209533_12152491	3300025874	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKY
Ga0209631_100730951	3300025890	Pelagic Marine	MRSLSDLRDVMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSE
Ga0209335_101922732	3300025894	Pelagic Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRA
Ga0209192_101913222	3300027752	Marine	MKSLDDPPKSSSERQKAWRDRRKAEGYEMHTIWLDPDVADSLAKYLEGADKPQAERTRLINEAVRAMLGQ
Ga0257126_10360335	3300028287	Marine	MRSLSDLRDAMDKPPPKTNAHRQKEWRDKRKADGYEMHTVWLDPDVAEHLNKYLDESEKPQAERTRLINEAVRAMLDR
Ga0257126_10628333	3300028287	Marine	MNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSDKPQAERTRLINEAVRAMLG
Ga0307488_103646871	3300031519	Sackhole Brine	ISLRLMRRKTMNDKQPKTNADRQKAWRDKRKADGYEMHTVWLDPDVAEHLNKYLDGSEKPQAERTRLINEAVRAMLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088818

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences