Metagenome / Metatranscriptome Family F088784

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F088784
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	48 residues
Representative Sequence	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR
Number of Associated Samples	82
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	77.98 %
% of genes near scaffold ends (potentially truncated)	38.53 %
% of genes from short scaffolds (< 2000 bps)	82.57 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Predicted Viral (36.697 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (29.358 % of family members)
Environment Ontology (ENVO)	Unclassified (60.550 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (58.716 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 36.71% Coil/Unstructured: 63.29%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04266	ASCH	5.50
PF03747	ADP_ribosyl_GH	2.75
PF00476	DNA_pol_A	1.83
PF00268	Ribonuc_red_sm	0.92
PF06067	DUF932	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	5.50
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	5.50
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	5.50
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	2.75
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	1.83
COG0208	Ribonucleotide reductase beta subunit, ferritin-like domain	Nucleotide transport and metabolism [F]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.48 %
Unclassified	root	N/A	27.52 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	46.79 %
Unclassified	root	N/A	27.52 %
cellular organisms	root	All Organisms → cellular organisms	25.69 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Unclassified	root	N/A	27.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.69 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.09 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Unclassified	root	N/A	27.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.10 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.09 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Unclassified	root	N/A	27.52 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.09 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Unclassified	root	N/A	27.52 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.09 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Unclassified	root	N/A	27.52 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.34 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	0.92 %
Herelleviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Unclassified	root	N/A	27.52 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.34 %
Bastillevirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae → Bastillevirinae	0.92 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002470\|metazooDRAFT_1349034	Not Available	596	Open in IMG/M
3300003277\|JGI25908J49247_10034873	All Organisms → Viruses → Predicted Viral	1397	Open in IMG/M
3300003277\|JGI25908J49247_10122410	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300003393\|JGI25909J50240_1015528	All Organisms → Viruses → Predicted Viral	1806	Open in IMG/M
3300003393\|JGI25909J50240_1086792	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300003412\|JGI25912J50252_10085275	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300003499\|JGI25930J51415_1006764	All Organisms → Viruses → Predicted Viral	2396	Open in IMG/M
3300004282\|Ga0066599_100400828	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300004481\|Ga0069718_15409756	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300004763\|Ga0007746_1390528	Not Available	548	Open in IMG/M
3300005581\|Ga0049081_10044530	All Organisms → Viruses → Predicted Viral	1683	Open in IMG/M
3300005581\|Ga0049081_10054402	All Organisms → Viruses → Predicted Viral	1513	Open in IMG/M
3300005581\|Ga0049081_10089942	All Organisms → Viruses → Predicted Viral	1148	Open in IMG/M
3300005581\|Ga0049081_10107932	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300005581\|Ga0049081_10158358	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300005581\|Ga0049081_10226268	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300005581\|Ga0049081_10280130	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300005582\|Ga0049080_10317766	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300006030\|Ga0075470_10032956	All Organisms → Viruses → Predicted Viral	1602	Open in IMG/M
3300006639\|Ga0079301_1187938	Not Available	597	Open in IMG/M
3300006641\|Ga0075471_10153699	All Organisms → Viruses → Predicted Viral	1215	Open in IMG/M
3300006641\|Ga0075471_10412559	Not Available	676	Open in IMG/M
3300006863\|Ga0075459_1051274	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300006863\|Ga0075459_1090487	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300008107\|Ga0114340_1024490	All Organisms → Viruses → Predicted Viral	3277	Open in IMG/M
3300008110\|Ga0114343_1021980	All Organisms → cellular organisms → Bacteria → Proteobacteria	5856	Open in IMG/M
3300008258\|Ga0114840_1010285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1605	Open in IMG/M
3300008266\|Ga0114363_1084061	All Organisms → Viruses → Predicted Viral	1179	Open in IMG/M
3300008266\|Ga0114363_1173644	Not Available	691	Open in IMG/M
3300008448\|Ga0114876_1063242	All Organisms → Viruses → Predicted Viral	1608	Open in IMG/M
3300008450\|Ga0114880_1097500	All Organisms → Viruses → Predicted Viral	1143	Open in IMG/M
3300009068\|Ga0114973_10472877	Not Available	651	Open in IMG/M
3300009183\|Ga0114974_10163503	All Organisms → Viruses → Predicted Viral	1384	Open in IMG/M
3300009187\|Ga0114972_10000472	Not Available	30058	Open in IMG/M
3300009194\|Ga0114983_1038600	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300009419\|Ga0114982_1160791	Not Available	694	Open in IMG/M
3300010966\|Ga0137675_1000004	Not Available	56483	Open in IMG/M
3300017701\|Ga0181364_1038500	Not Available	765	Open in IMG/M
3300017701\|Ga0181364_1063130	Not Available	571	Open in IMG/M
3300017722\|Ga0181347_1070865	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1028	Open in IMG/M
3300017761\|Ga0181356_1197578	Not Available	597	Open in IMG/M
3300017766\|Ga0181343_1203716	Not Available	541	Open in IMG/M
3300017778\|Ga0181349_1153874	Not Available	824	Open in IMG/M
3300017780\|Ga0181346_1340074	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M
3300017784\|Ga0181348_1177082	Not Available	780	Open in IMG/M
3300017785\|Ga0181355_1092928	All Organisms → Viruses → Predicted Viral	1253	Open in IMG/M
3300017785\|Ga0181355_1134538	All Organisms → Viruses → Predicted Viral	1005	Open in IMG/M
3300017785\|Ga0181355_1310888	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300018041\|Ga0181601_10277015	All Organisms → cellular organisms → Bacteria → Proteobacteria	941	Open in IMG/M
3300019784\|Ga0181359_1048921	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300019784\|Ga0181359_1084999	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300019784\|Ga0181359_1087674	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300019784\|Ga0181359_1137460	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300019784\|Ga0181359_1144474	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300019784\|Ga0181359_1222537	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
3300020048\|Ga0207193_1314348	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300020161\|Ga0211726_10476530	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12830	Open in IMG/M
3300020205\|Ga0211731_10477229	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300021956\|Ga0213922_1081177	Not Available	674	Open in IMG/M
3300021961\|Ga0222714_10091389	All Organisms → Viruses → Predicted Viral	1952	Open in IMG/M
3300021962\|Ga0222713_10006647	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10947	Open in IMG/M
3300022179\|Ga0181353_1030616	All Organisms → Viruses → Predicted Viral	1425	Open in IMG/M
3300022407\|Ga0181351_1095603	All Organisms → Viruses → Predicted Viral	1157	Open in IMG/M
3300022407\|Ga0181351_1112729	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300024500\|Ga0255143_1038272	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Herelleviridae → Bastillevirinae	791	Open in IMG/M
3300025585\|Ga0208546_1096942	Not Available	663	Open in IMG/M
3300025635\|Ga0208147_1088734	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300025635\|Ga0208147_1124298	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300025732\|Ga0208784_1083540	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300025872\|Ga0208783_10187054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	863	Open in IMG/M
3300026478\|Ga0255156_1056268	Not Available	716	Open in IMG/M
3300027114\|Ga0208009_1034724	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1030	Open in IMG/M
3300027499\|Ga0208788_1135283	Not Available	551	Open in IMG/M
3300027608\|Ga0208974_1021866	All Organisms → Viruses → Predicted Viral	1977	Open in IMG/M
3300027631\|Ga0208133_1131714	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300027644\|Ga0209356_1112296	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300027659\|Ga0208975_1023961	All Organisms → Viruses → Predicted Viral	1983	Open in IMG/M
3300027659\|Ga0208975_1058243	All Organisms → Viruses → Predicted Viral	1173	Open in IMG/M
3300027659\|Ga0208975_1088535	Not Available	909	Open in IMG/M
3300027710\|Ga0209599_10061646	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	986	Open in IMG/M
3300027710\|Ga0209599_10062023	Not Available	983	Open in IMG/M
3300027732\|Ga0209442_1029711	All Organisms → Viruses → Predicted Viral	2473	Open in IMG/M
3300027759\|Ga0209296_1103255	All Organisms → Viruses → Predicted Viral	1357	Open in IMG/M
3300027760\|Ga0209598_10000145	Not Available	54526	Open in IMG/M
3300027772\|Ga0209768_10415060	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300027785\|Ga0209246_10208088	Not Available	763	Open in IMG/M
3300027798\|Ga0209353_10008524	Not Available	5040	Open in IMG/M
3300027805\|Ga0209229_10104356	All Organisms → Viruses → Predicted Viral	1277	Open in IMG/M
3300027899\|Ga0209668_11062036	Not Available	545	Open in IMG/M
3300028025\|Ga0247723_1159909	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300031758\|Ga0315907_10006077	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12911	Open in IMG/M
3300031758\|Ga0315907_10029890	Not Available	4931	Open in IMG/M
3300031784\|Ga0315899_10003309	Not Available	17578	Open in IMG/M
3300031857\|Ga0315909_10206323	All Organisms → Viruses → Predicted Viral	1551	Open in IMG/M
3300031963\|Ga0315901_10123430	All Organisms → Viruses → Predicted Viral	2354	Open in IMG/M
3300031963\|Ga0315901_10688228	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	760	Open in IMG/M
3300032092\|Ga0315905_10062530	All Organisms → Viruses → Predicted Viral	3774	Open in IMG/M
3300032093\|Ga0315902_10448091	All Organisms → Viruses → Predicted Viral	1145	Open in IMG/M
3300032116\|Ga0315903_10642864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	805	Open in IMG/M
3300033994\|Ga0334996_0443200	Not Available	597	Open in IMG/M
3300034012\|Ga0334986_0124463	All Organisms → Viruses → Predicted Viral	1515	Open in IMG/M
3300034050\|Ga0335023_0067012	All Organisms → Viruses → Predicted Viral	2089	Open in IMG/M
3300034062\|Ga0334995_0522401	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300034064\|Ga0335001_0410821	Not Available	726	Open in IMG/M
3300034093\|Ga0335012_0016500	Not Available	4417	Open in IMG/M
3300034104\|Ga0335031_0197072	All Organisms → Viruses → Predicted Viral	1366	Open in IMG/M
3300034106\|Ga0335036_0002063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17706	Open in IMG/M
3300034106\|Ga0335036_0316822	All Organisms → Viruses → Predicted Viral	1030	Open in IMG/M
3300034283\|Ga0335007_0065304	All Organisms → Viruses → Predicted Viral	2771	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	92.66%
Terrestrial	Environmental → Terrestrial	7.34%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.82%
Marine	Environmental → Aquatic → Marine	12.84%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	7.34%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	43.12%
Lake	Environmental → Aquatic → Freshwater → Lake	22.94%
Coastal	Environmental → Aquatic → Marine → Coastal	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.75%
River	Environmental → Aquatic → Freshwater → River	1.83%
Pond	Environmental → Aquatic → Freshwater → Pond	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%
Creek	Environmental → Aquatic → Freshwater → Creek	0.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	41.28%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	22.02%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.17%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.92%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.92%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.92%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	29.36%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	11.01%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.17%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.17%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	8.26%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	6.42%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.83%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.83%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.92%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.92%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.92%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.92%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.92%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002470	Freshwater microbial communities from San Paulo Zoo lake, Brazil - FEB 2013	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006863	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010966	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV1bis, april 2016	Environmental	Open in IMG/M
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024500	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026478	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027499	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
metazooDRAFT_13490342	3300002470	Lake	MLKTMKAKFKSICCKTGATINVGDIIVYDSVSRKAWLTVDDDRLFVTIS*
JGI25908J49247_100348734	3300003277	Freshwater Lake	MERIMKARYKGICCKTGAPINVGDIVVYDTVSRKVWLTVDDDRMVVHVCSR*
JGI25908J49247_101224103	3300003277	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR*
JGI25909J50240_10155287	3300003393	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSXTXKAWLTVDEDRMVVHVCCR*
JGI25909J50240_10867921	3300003393	Freshwater Lake	CCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCSR*
JGI25912J50252_100852753	3300003412	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR*
JGI25930J51415_10067645	3300003499	Freshwater Lake	MEQVMKARYKGICCKTGAIINVGDIIVYDSVARKAWLTVDDDRLFVNFS*
Ga0066599_1004008282	3300004282	Freshwater	MERIMKAKYKGICCKTGAPINVGDIVVYDTVTRKVWLTVDEDRMFVNCVMCK*
Ga0069718_154097563	3300004481	Sediment	MERVMKAKYKGICCKTGAPINVGDIVVYDTVSRKVWLTVDEDRMFVNCVMCK*
Ga0007746_13905282	3300004763	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCSR*
Ga0049081_100445301	3300005581	Freshwater Lentic	KGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR*
Ga0049081_100544027	3300005581	Freshwater Lentic	MERVMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVD
Ga0049081_100899422	3300005581	Freshwater Lentic	MERIMKARYKGICCRTGAIINVGDIIVYDSVSRKAWLTVDDDRMFVTIS*
Ga0049081_101079325	3300005581	Freshwater Lentic	MKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRM
Ga0049081_101583581	3300005581	Freshwater Lentic	ARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCK*
Ga0049081_102262683	3300005581	Freshwater Lentic	KGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCSR*
Ga0049081_102801303	3300005581	Freshwater Lentic	GICCKTGAPINVGDIVVYDTVSRKVWLTVDDDRMVVHVCSR*
Ga0049080_103177663	3300005582	Freshwater Lentic	KTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR*
Ga0075470_100329566	3300006030	Aqueous	MERIMKAKFKGICCKTGATINVGDIIVYDSVSRKAWLTVDIDRMVVHVCCR*
Ga0079301_11879383	3300006639	Deep Subsurface	MERVMKAKYKGICCRTGAPINVGDIVVYDTVTRKVWLTVDDDRMVMHVCSR*
Ga0075471_101536992	3300006641	Aqueous	MLKTMTAKFKGICCKTGAIINVGDIIVYDSVARKAWLTVDEDRMFVNFS*
Ga0075471_104125593	3300006641	Aqueous	MEQVMKARYKGICCKTGAIINVGDIIVYNRATRKAWLTVDEDRMVIHVCSR*
Ga0075459_10512741	3300006863	Aqueous	ICCKTGATINVGDIIVYDSVTRKAWLTVDDDRLFANFS*
Ga0075459_10904872	3300006863	Aqueous	MERIMKAKFKGICCKTGATINVGDIIVYDSVTRKAWLTVDEDRLFVNFS*
Ga0114340_102449012	3300008107	Freshwater, Plankton	MERVMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVPS*
Ga0114343_102198012	3300008110	Freshwater, Plankton	MERVMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDE
Ga0114840_10102852	3300008258	Freshwater, Plankton	MERIMKARYKGICCKTGAIINVGDIIVYNSATRKAWLTVDEDRMVVHVCCR*
Ga0114363_10840615	3300008266	Freshwater, Plankton	MKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVV
Ga0114363_11736444	3300008266	Freshwater, Plankton	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDED
Ga0114876_10632421	3300008448	Freshwater Lake	MERIMKARYKGICCRTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR*
Ga0114880_10975005	3300008450	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWL
Ga0114973_104728773	3300009068	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVD
Ga0114974_101635032	3300009183	Freshwater Lake	MERIMKAKYKGICCKTGAIINVGDIVVYDTVSRKVWLTVDEDRMFVNLVMCK*
Ga0114972_1000047247	3300009187	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYNSVTRKAWLTVDEDRMVVHVCCR*
Ga0114983_10386003	3300009194	Deep Subsurface	MERVMKAKFKGICCKTGATINVGDIIVYDSVSRKAWLTVDEDRMVVHVCCR*
Ga0114982_11607913	3300009419	Deep Subsurface	MKAKFKGICCKTGATINVGDIIVYDSVSRKAWLTVDEDRMVVHVCCR*
Ga0137675_100000484	3300010966	Pond Fresh Water	MERIMKAKYKGICCKTGAPINVGDIVVYDTVTKKVWLTVDEDRMVMHVCSR*
Ga0181364_10385003	3300017701	Freshwater Lake	MERIMKARYKGVCCRTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR
Ga0181364_10631302	3300017701	Freshwater Lake	MLKTMKAKFKGVCCKTGAIINVGDIVVYDTVSRKVWLTVDEDRMFVNVVMCK
Ga0181347_10708651	3300017722	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMV
Ga0181356_11975783	3300017761	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRM
Ga0181343_12037162	3300017766	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMFVNVVMCK
Ga0181349_11538741	3300017778	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWL
Ga0181346_13400741	3300017780	Freshwater Lake	MLKTMTAKFKGICCKTGAIINVGDVIVYIIVARKAW
Ga0181348_11770821	3300017784	Freshwater Lake	MERIMKARYKGICCRTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCC
Ga0181355_10929282	3300017785	Freshwater Lake	MLKIMTAKFKGICCKTGAIINVGDIIVYDSVTRKAWLTVDDDRMFVNVVMCK
Ga0181355_11345385	3300017785	Freshwater Lake	GAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0181355_13108881	3300017785	Freshwater Lake	RTTFGGNMERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0181601_102770152	3300018041	Salt Marsh	MERIMKAKFKGVCCKTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0181359_10489211	3300019784	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0181359_10849993	3300019784	Freshwater Lake	MERIMKARYKGICCKTGAPINVGDIVVYDTVSRKVWLTVDDDRMVVHVCSR
Ga0181359_10876744	3300019784	Freshwater Lake	MERVMKARYKGICCKTGAVINVGDIIVYDSVSRKAWLTVDEDRMFVNVVMCK
Ga0181359_11374603	3300019784	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR
Ga0181359_11444743	3300019784	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCSR
Ga0181359_12225372	3300019784	Freshwater Lake	MTKIMKAKYKGICCKTGAPINVGDIVVYDTVSRKVWLTVDEDRMFVNVVMCK
Ga0207193_13143484	3300020048	Freshwater Lake Sediment	QAWCYLHEEFRMTKIMKAKYKGICCKTGAPINVGDIVVYDTVSRKVWLTVDEDRMFVIFS
Ga0211726_104765309	3300020161	Freshwater	MERIMKAKYKGICCKTGAPINVGDIVVYDTVTRKVWLTVDIDRMVVHVCCK
Ga0211731_104772292	3300020205	Freshwater	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKVWLTVDIDRMVVHVCCK
Ga0213922_10811771	3300021956	Freshwater	MLKIIPAKFKGICCKTGATINVGDIIVYDSVTRKAWLTVDEDRMFVNVVMCK
Ga0222714_100913895	3300021961	Estuarine Water	MERIMKARYKGICCKTRAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCK
Ga0222713_1000664726	3300021962	Estuarine Water	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCK
Ga0181353_10306165	3300022179	Freshwater Lake	MEQVMKARYKGICCKTGAIINVGDIIVYNRATRKAWLTVDEDRMVVHVCCR
Ga0181351_10956035	3300022407	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWLTVD
Ga0181351_11127295	3300022407	Freshwater Lake	GYMERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR
Ga0255143_10382723	3300024500	Freshwater	MGVSMERIMKAKFKTGAIINVGDIIVYDSVSRKAWLTVDDDRMVIHVCSR
Ga0208546_10969423	3300025585	Aqueous	MERIMKAKFKGICCKTGATINVGDIIVYDSVARKAWLTVDEDRMFVNFS
Ga0208147_10887341	3300025635	Aqueous	CCKTGAPINVGDIVVYDTVSRKAWLTVDEDRMFVNVVMCK
Ga0208147_11242982	3300025635	Aqueous	VVLFIKRIGMLKIIPAKFKGICYKTGAIINVGDIIVYDSVSRRAWLTVDEDRMFVNFS
Ga0208784_10835403	3300025732	Aqueous	MERIMKAKFKGICCKTGATINVGDIIVYDSVSRKAWLTVDIDRMVVHVCCR
Ga0208783_101870542	3300025872	Aqueous	MLKTMTAKFKGICCKTGAIINVGDIIVYDSVARKAWLTVDEDRMFVNFS
Ga0255156_10562683	3300026478	Freshwater	MGVSMERIMKAKFKGICCKTGAIINVGDIIVYDSVSRKAWLTVDDDRMVIHVCSR
Ga0208009_10347244	3300027114	Deep Subsurface	MERVMKAKYKGICCRTGAPINVGDIVVYDTVTRKVWLTVDDDRMVM
Ga0208788_11352833	3300027499	Deep Subsurface	MERVMKAKYKGICCRTGAPINVGDIVVYDTVTRKVWLTVDDDRMVMHVCSR
Ga0208974_10218667	3300027608	Freshwater Lentic	MERVMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCK
Ga0208133_11317142	3300027631	Estuarine	MRKTMQAKFKGVCCKTGAIINVGDIIVYDSVSRKAWLTVDEDRMFVNVVMCK
Ga0209356_11122963	3300027644	Freshwater Lake	MERIMKARYKGICCRTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR
Ga0208975_10239611	3300027659	Freshwater Lentic	MKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCK
Ga0208975_10582431	3300027659	Freshwater Lentic	MKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCSR
Ga0208975_10885351	3300027659	Freshwater Lentic	MERVMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMV
Ga0209599_100616462	3300027710	Deep Subsurface	MERVMKAKFKGICCKTGATINVGDIIVYDSVSRKAWLTVDEDRMVVHVCCR
Ga0209599_100620232	3300027710	Deep Subsurface	MERIMKAKYKGICCKTGAIINVGDIIVYDSVSRKAWLTVDIDRMVVHVCCR
Ga0209442_10297119	3300027732	Freshwater Lake	GYMERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0209296_11032553	3300027759	Freshwater Lake	MERIMKAKYKGICCKTGAIINVGDIVVYDTVSRKVWLTVDEDRMFVNLVMCK
Ga0209598_1000014536	3300027760	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYNSVTRKAWLTVDEDRMVVHVCCR
Ga0209768_104150603	3300027772	Freshwater Lake	RTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0209246_102080884	3300027785	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTV
Ga0209353_1000852412	3300027798	Freshwater Lake	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAW
Ga0209229_101043562	3300027805	Freshwater And Sediment	MTKIMKAKYKGICCKTGAPINVGDIVVYDTVSRKVWLTVDEDRMFVIFS
Ga0209668_110620363	3300027899	Freshwater Lake Sediment	MFKTMKAKYKGVCCKTGATINVGDIIVYDSVSRKAWLTVDEDRMVVHVCCR
Ga0247723_11599091	3300028025	Deep Subsurface Sediment	YMERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWLTVDEDRMFVNVVMCK
Ga0315907_1000607728	3300031758	Freshwater	MERIVKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCSR
Ga0315907_1002989011	3300031758	Freshwater	MEQVMKAKYKGICCKTGAIINVGDIIVYNRATRKAWLTVDEDRMVVHVCCR
Ga0315899_1000330924	3300031784	Freshwater	MERIMKARYKGICCKTGAIINVGDIIVYNSATRKAWLTVDEDRMVVHVCCR
Ga0315909_102063236	3300031857	Freshwater	MERIMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVV
Ga0315901_1012343011	3300031963	Freshwater	YKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR
Ga0315901_106882283	3300031963	Freshwater	MERIVKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDR
Ga0315905_100625307	3300032092	Freshwater	MERIMKARYKGICCKTGAIINVGDIIVYDSATRKAWLTVDEDRMVVHVCCR
Ga0315902_104480915	3300032093	Freshwater	MERVMKARYKGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCSR
Ga0315903_106428641	3300032116	Freshwater	MERVMKARYKGICCKTGAIINVGDIIVYDSFTRKAWL
Ga0334996_0443200_447_596	3300033994	Freshwater	RIMKAKFKGVCCKTGAIINVGDIIVYDSVSRKAWLTVDIDRMVVHVCYR
Ga0334986_0124463_790_945	3300034012	Freshwater	MERIMKAKFKGICCRTGAIINVGDIIVYDSVSRKAWLTVDIDRMVVHVCYR
Ga0335023_0067012_2_121	3300034050	Freshwater	CCKTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0334995_0522401_576_707	3300034062	Freshwater	YKGICCRTGAIINVGDIIVYDSSTRKAWLTVDEDRMVVHVCCR
Ga0335001_0410821_417_572	3300034064	Freshwater	MERIMKARYKGICCKTGAIINVGDIVVYDTVSRKVWLTVDEDRMVVHVCCR
Ga0335012_0016500_3_125	3300034093	Freshwater	MERIMKARYKGICCKTGAIINVGDIIVYDSSTRKAWLTVDE
Ga0335031_0197072_220_375	3300034104	Freshwater	MEQVMKARYKGICCKTGAIINVGDIIVYDSVSRKAWLTVDIDRMVVHVCCR
Ga0335036_0002063_11771_11926	3300034106	Freshwater	MERIMKAKYKGICCKTGAIINVGDIIVYDSVSRKAWLTVDIDRMVVHVCYR
Ga0335036_0316822_1_129	3300034106	Freshwater	KGICCKTGAIINVGDIIVYDSFTRKAWLTVDEDRMVVHVCCR
Ga0335007_0065304_449_607	3300034283	Freshwater	MERIMKAKYKGICCKTGAIINVGDIIMYNSATRKAWLTVDEDRMFVNVVMCK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088784

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences