Metagenome Family F088768

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088768
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	58 residues
Representative Sequence	MKPLPAAPAIPQTPGVLRARIQLRVELARDLNPETLDYLLAHQRIAELERELAKLEGRR
Number of Associated Samples	70
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	36.70 %
% of genes near scaffold ends (potentially truncated)	16.51 %
% of genes from short scaffolds (< 2000 bps)	73.39 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.055 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (29.358 % of family members)
Environment Ontology (ENVO)	Unclassified (53.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (35.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.68% β-sheet: 0.00% Coil/Unstructured: 56.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF12684	DUF3799	16.51
PF00145	DNA_methylase	5.50
PF08299	Bac_DnaA_C	2.75
PF01844	HNH	2.75
PF00717	Peptidase_S24	2.75
PF05866	RusA	1.83
PF09374	PG_binding_3	1.83
PF13673	Acetyltransf_10	1.83
PF04404	ERF	1.83
PF10073	DUF2312	1.83
PF01507	PAPS_reduct	0.92
PF12236	Head-tail_con	0.92
PF01381	HTH_3	0.92
PF00528	BPD_transp_1	0.92
PF00589	Phage_integrase	0.92
PF02195	ParBc	0.92
PF03237	Terminase_6N	0.92
PF05050	Methyltransf_21	0.92
PF00622	SPRY	0.92
PF14549	P22_Cro	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	5.50
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	2.75
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	1.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
All Organisms	root	All Organisms	33.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
cellular organisms	root	All Organisms → cellular organisms	22.94 %
Viruses	superkingdom	All Organisms → Viruses	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.67 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2.75 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.75 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.83 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3.67 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.83 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.83 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.92 %
Thalassospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae	0.92 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Quisquiliibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium	2.75 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.83 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.83 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.92 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.92 %
Thalassospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira	0.92 %
Telmatospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	0.92 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	2.75 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.83 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.83 %
unclassified Thalassospira	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira → unclassified Thalassospira	0.92 %
unclassified Telmatospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum	0.92 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.92 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.92 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.17 %
Quisquiliibacterium transsilvanicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	2.75 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.83 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.83 %
Telmatospirillum sp. J64-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum → Telmatospirillum sp. J64-1	0.92 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.92 %
Thalassospira sp. MCCC 1A01428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira → unclassified Thalassospira → Thalassospira sp. MCCC 1A01428	0.92 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.92 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101600694	Not Available	1160	Open in IMG/M
3300002835\|B570J40625_101487188	Not Available	556	Open in IMG/M
3300005581\|Ga0049081_10000277	All Organisms → cellular organisms → Bacteria → Proteobacteria	20339	Open in IMG/M
3300005582\|Ga0049080_10035494	Not Available	1736	Open in IMG/M
3300005805\|Ga0079957_1086165	All Organisms → Viruses → Predicted Viral	1757	Open in IMG/M
3300005805\|Ga0079957_1095985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1630	Open in IMG/M
3300005805\|Ga0079957_1223311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	892	Open in IMG/M
3300006030\|Ga0075470_10000779	Not Available	10101	Open in IMG/M
3300006030\|Ga0075470_10001121	Not Available	8372	Open in IMG/M
3300006641\|Ga0075471_10164638	Not Available	1168	Open in IMG/M
3300006641\|Ga0075471_10215000	Not Available	997	Open in IMG/M
3300006641\|Ga0075471_10482387	Not Available	616	Open in IMG/M
3300006641\|Ga0075471_10485369	Not Available	614	Open in IMG/M
3300006802\|Ga0070749_10315996	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300006917\|Ga0075472_10003520	All Organisms → cellular organisms → Bacteria → Proteobacteria	6397	Open in IMG/M
3300007538\|Ga0099851_1099398	Not Available	1109	Open in IMG/M
3300007538\|Ga0099851_1142244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	897	Open in IMG/M
3300007541\|Ga0099848_1057975	Not Available	1546	Open in IMG/M
3300008055\|Ga0108970_10624601	Not Available	1398	Open in IMG/M
3300008055\|Ga0108970_10713510	Not Available	509	Open in IMG/M
3300008266\|Ga0114363_1115977	Not Available	938	Open in IMG/M
3300008448\|Ga0114876_1022207	All Organisms → cellular organisms → Bacteria → Proteobacteria	3266	Open in IMG/M
3300008448\|Ga0114876_1139795	Not Available	899	Open in IMG/M
3300010354\|Ga0129333_10068161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	3308	Open in IMG/M
3300010354\|Ga0129333_10230082	Not Available	1678	Open in IMG/M
3300010354\|Ga0129333_10407565	Not Available	1202	Open in IMG/M
3300010354\|Ga0129333_11127646	Not Available	654	Open in IMG/M
3300010354\|Ga0129333_11550736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300010370\|Ga0129336_10013103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	5066	Open in IMG/M
3300010370\|Ga0129336_10354776	Not Available	807	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10106353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum → Telmatospirillum sp. J64-1	2103	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10092994	Not Available	2589	Open in IMG/M
3300013372\|Ga0177922_10291018	All Organisms → Viruses → Predicted Viral	1613	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10032889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	4438	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10145888	Not Available	1587	Open in IMG/M
3300017707\|Ga0181363_1057272	Not Available	689	Open in IMG/M
3300017707\|Ga0181363_1085809	Not Available	536	Open in IMG/M
3300017747\|Ga0181352_1195649	Not Available	521	Open in IMG/M
3300017754\|Ga0181344_1026782	Not Available	1770	Open in IMG/M
3300017754\|Ga0181344_1079321	Not Available	964	Open in IMG/M
3300017766\|Ga0181343_1080693	Not Available	933	Open in IMG/M
3300017785\|Ga0181355_1149114	Not Available	945	Open in IMG/M
3300019784\|Ga0181359_1000511	All Organisms → cellular organisms → Bacteria → Proteobacteria	8800	Open in IMG/M
3300020109\|Ga0194112_10115022	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2369	Open in IMG/M
3300020196\|Ga0194124_10156406	Not Available	1219	Open in IMG/M
3300020198\|Ga0194120_10189670	Not Available	1154	Open in IMG/M
3300020578\|Ga0194129_10034706	All Organisms → cellular organisms → Bacteria	4128	Open in IMG/M
3300021961\|Ga0222714_10009593	Not Available	8493	Open in IMG/M
3300021961\|Ga0222714_10050412	All Organisms → cellular organisms → Bacteria → Proteobacteria	2889	Open in IMG/M
3300021961\|Ga0222714_10320537	Not Available	843	Open in IMG/M
3300021962\|Ga0222713_10219333	Not Available	1259	Open in IMG/M
3300021963\|Ga0222712_10020186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5567	Open in IMG/M
3300021963\|Ga0222712_10295249	Not Available	1018	Open in IMG/M
3300022179\|Ga0181353_1011025	Not Available	2276	Open in IMG/M
3300022179\|Ga0181353_1037711	Not Available	1279	Open in IMG/M
3300022179\|Ga0181353_1063421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	953	Open in IMG/M
3300022179\|Ga0181353_1087622	Not Available	779	Open in IMG/M
3300022190\|Ga0181354_1227865	Not Available	542	Open in IMG/M
3300022198\|Ga0196905_1179114	Not Available	537	Open in IMG/M
3300025585\|Ga0208546_1000139	Not Available	34864	Open in IMG/M
3300025585\|Ga0208546_1020957	All Organisms → Viruses → Predicted Viral	1652	Open in IMG/M
3300025635\|Ga0208147_1069620	Not Available	879	Open in IMG/M
3300025872\|Ga0208783_10260503	Not Available	699	Open in IMG/M
3300026457\|Ga0255160_1087116	Not Available	509	Open in IMG/M
3300027127\|Ga0255071_1006208	All Organisms → Viruses → Predicted Viral	2066	Open in IMG/M
3300027128\|Ga0255099_1024337	All Organisms → Viruses → Predicted Viral	1066	Open in IMG/M
3300027138\|Ga0255064_1015075	All Organisms → Viruses → Predicted Viral	1349	Open in IMG/M
3300027151\|Ga0255063_1002823	All Organisms → Viruses → Predicted Viral	4295	Open in IMG/M
3300027152\|Ga0255100_1029443	All Organisms → Viruses → Predicted Viral	1151	Open in IMG/M
3300027659\|Ga0208975_1001366	Not Available	10363	Open in IMG/M
3300027899\|Ga0209668_10547813	Not Available	770	Open in IMG/M
3300028083\|Ga0255190_1037286	Not Available	764	Open in IMG/M
3300031857\|Ga0315909_10156995	Not Available	1863	Open in IMG/M
3300031857\|Ga0315909_10859134	Not Available	565	Open in IMG/M
3300031951\|Ga0315904_10756065	Not Available	807	Open in IMG/M
3300031951\|Ga0315904_10797863	Not Available	778	Open in IMG/M
3300031963\|Ga0315901_11151477	Not Available	529	Open in IMG/M
3300032116\|Ga0315903_10233126	Not Available	1606	Open in IMG/M
3300033482\|Ga0316627_100496770	Not Available	1082	Open in IMG/M
3300033521\|Ga0316616_100576656	Not Available	1314	Open in IMG/M
3300033557\|Ga0316617_100455821	Not Available	1147	Open in IMG/M
3300033980\|Ga0334981_0224221	Not Available	863	Open in IMG/M
3300033981\|Ga0334982_0012295	Not Available	5057	Open in IMG/M
3300033981\|Ga0334982_0030524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Thalassospira → unclassified Thalassospira → Thalassospira sp. MCCC 1A01428	3078	Open in IMG/M
3300033981\|Ga0334982_0096837	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300033981\|Ga0334982_0270843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	809	Open in IMG/M
3300033981\|Ga0334982_0322020	Not Available	721	Open in IMG/M
3300033994\|Ga0334996_0000207	Not Available	33962	Open in IMG/M
3300034012\|Ga0334986_0019899	All Organisms → Viruses → Predicted Viral	4599	Open in IMG/M
3300034012\|Ga0334986_0154045	All Organisms → Viruses → Predicted Viral	1323	Open in IMG/M
3300034012\|Ga0334986_0191346	Not Available	1151	Open in IMG/M
3300034012\|Ga0334986_0444046	Not Available	650	Open in IMG/M
3300034019\|Ga0334998_0101421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1911	Open in IMG/M
3300034019\|Ga0334998_0328664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Quisquiliibacterium → Quisquiliibacterium transsilvanicum	899	Open in IMG/M
3300034061\|Ga0334987_0013743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7440	Open in IMG/M
3300034063\|Ga0335000_0008756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7915	Open in IMG/M
3300034063\|Ga0335000_0111067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	1862	Open in IMG/M
3300034063\|Ga0335000_0230656	Not Available	1175	Open in IMG/M
3300034101\|Ga0335027_0126385	Not Available	1910	Open in IMG/M
3300034101\|Ga0335027_0402035	Not Available	888	Open in IMG/M
3300034102\|Ga0335029_0644754	Not Available	585	Open in IMG/M
3300034103\|Ga0335030_0001318	Not Available	20807	Open in IMG/M
3300034103\|Ga0335030_0198935	Not Available	1396	Open in IMG/M
3300034103\|Ga0335030_0464478	Not Available	806	Open in IMG/M
3300034104\|Ga0335031_0721716	Not Available	569	Open in IMG/M
3300034111\|Ga0335063_0286240	Not Available	881	Open in IMG/M
3300034119\|Ga0335054_0275005	Not Available	995	Open in IMG/M
3300034120\|Ga0335056_0004087	All Organisms → cellular organisms → Bacteria → Proteobacteria	10511	Open in IMG/M
3300034356\|Ga0335048_0086850	Not Available	1910	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.17%
Host-Associated	Host-Associated	1.83%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.41%
Terrestrial	Environmental → Terrestrial	2.75%
Plants	Host-Associated → Plants	1.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	67.89%
Marine	Environmental → Aquatic → Marine	27.52%
Soil	Environmental → Terrestrial → Soil	2.75%
Leaf	Host-Associated → Plants → Leaf	1.83%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	39.45%
Coastal	Environmental → Aquatic → Marine → Coastal	21.10%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.51%
River	Environmental → Aquatic → Freshwater → River	6.42%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.75%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	39.45%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	21.10%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.68%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	6.42%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.50%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.83%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.92%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	29.36%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	14.68%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.93%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	6.42%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	6.42%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	5.50%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.50%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.50%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.75%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.92%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.92%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300020196	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300020578	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026457	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8h	Environmental	Open in IMG/M
3300027127	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8h	Environmental	Open in IMG/M
3300027128	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8d	Environmental	Open in IMG/M
3300027138	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_0h	Environmental	Open in IMG/M
3300027151	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_0h	Environmental	Open in IMG/M
3300027152	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8d	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300028083	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8h	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1016006942	3300001213	Wetland	MKRLSVSPAIPQTPGVLRARIQLRVELARDLNPETLDYLLAHQRIAELERELAKLEGHR*
B570J40625_1014871882	3300002835	Freshwater	MTRPLPAVRALPDTPATLRARIQLRVELARDLNPETLDYLLAHQRIAALEHQLAAMEGKR
Ga0049081_1000027711	3300005581	Freshwater Lentic	MKPLPAAPAIPQTPNVLRARIQLRVELARDLNPDSIDYLLAHQRIAELERELAKLEGNR*
Ga0049080_100354941	3300005582	Freshwater Lentic	MKPLPAAPAIPQTPNVLRARIQLRVELARDLNPDSIDYLLAHQRIAELERELAKLE
Ga0079957_10861654	3300005805	Lake	MKSNGYKPEITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQKMEG*
Ga0079957_10959851	3300005805	Lake	MKNGYKLEITQTPGTLRTRIALRVELARDLDPQSLGYLLAHQRIADLERQLQKMEG*
Ga0079957_12233111	3300005805	Lake	MKSNGYKTEITQTPGTLRTRIALRVELARDLDTQSLDYLLAHQRIADLERQLQKMEG*
Ga0075470_100007793	3300006030	Aqueous	MKNGYKTEIHQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG*
Ga0075470_100011218	3300006030	Aqueous	MKRLPAATAIPQTPGVLRARIALRVELARDLDPHSLDYLLAHQRIAELERDLAKLEGNR*
Ga0075471_101646384	3300006641	Aqueous	MIRLPAAPAIPQTPGVLRSRIALRVELARDLNPETLDYLLAHQRIAALEHQLAALEGKR*
Ga0075471_102150004	3300006641	Aqueous	MSRTLPSALALPNTPGTLRSRIQLRIELARDLDPESLAYLLAHQRIAALERELSAMEKRDA*
Ga0075471_104823873	3300006641	Aqueous	MIRLPATPAIPQTPGTLRARIALRVELARDLNPETLDYLLAHQRIAELERELAKLEATR*
Ga0075471_104853692	3300006641	Aqueous	MRRLHAALAIPQTPGVLRSRIALRVELARDLNPDSIGYLLAHQRIAELERELAKLEGNR*
Ga0070749_103159962	3300006802	Aqueous	MKSNGYKSTITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG*
Ga0075472_1000352010	3300006917	Aqueous	MKPLHYAPTVAQTPATLRSRIALRVELARDLDPESIGHLLAHQRIADLERQLAAMEGAR*
Ga0099851_10993981	3300007538	Aqueous	MKRFPAAPAIPQTPGVLRARIALRVELARDLNPETLDYLLAHQRIAELERELAKLEGRR*
Ga0099851_11422443	3300007538	Aqueous	MTRPLPTVCALPETAGTLRARIQLRIELARDLNPETLDYLLAHQRIAALEHQLAALEGKR
Ga0099848_10579752	3300007541	Aqueous	MKRLPAAPAIKQTPGVLRARIALRVELARDLNPETLDYLLAHQRIAELERELAKLEGHR*
Ga0108970_106246013	3300008055	Estuary	MKPLPAAPAIPQTPGVLRSRIALRVELARDLDPHSLDYLLAHQRIAELERQLAALEGNR*
Ga0108970_107135101	3300008055	Estuary	MKSNGYKPEITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQA
Ga0114363_11159772	3300008266	Freshwater, Plankton	MKRLPAVRALPDTPATLRSRIQLRVELARDLNPETLDYLLAHQRIAALEHQLAAMEGKR*
Ga0114876_10222077	3300008448	Freshwater Lake	MSKPMPPVRMLQETAGTLRSKIQLRVELARDLDPESLGYLLAHQRIAALEHQLAALEGGR
Ga0114876_11397953	3300008448	Freshwater Lake	MKRFPAAPAIPQTPGVLRSRIALRVELARDLNPETLDYLLAHQRIAELERELAALEGHR*
Ga0129333_100681613	3300010354	Freshwater To Marine Saline Gradient	MKRLPAAPAILQTPGVLRARIQLRVELARDLNPETLDYLLAHQRIAELERELAKLEGQR*
Ga0129333_102300823	3300010354	Freshwater To Marine Saline Gradient	MKPLPVAPAIPQTPGVLRARIALRVELARDLDPHSLDYLLAHQRIAELERELAKLEGHR*
Ga0129333_104075653	3300010354	Freshwater To Marine Saline Gradient	MSRPLPAVRMLQETAGTLRSKIQLRVELARDLHPDSLSYLLAHQRIADLEHQLAALEGGR
Ga0129333_111276463	3300010354	Freshwater To Marine Saline Gradient	MKSNGYKPEITQTPGTLRTRIALRVELARDLDPQSLGYLLAHQRIADLERQLQKMEG*
Ga0129333_115507362	3300010354	Freshwater To Marine Saline Gradient	MKSNGYKPEITQTPGTLRTRIALRVELARDLDPQSLDYLLAHQRIAELERQLQKMEG*
Ga0129336_100131032	3300010370	Freshwater To Marine Saline Gradient	MKSNGYKPEITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQAMEG*
Ga0129336_103547762	3300010370	Freshwater To Marine Saline Gradient	MNRPLPAVRMLQETAGTLRSKIQLRVELARDLHPDSLSYLLAHQRIADLEHQLAALEGGR
(restricted) Ga0172373_101063534	3300013131	Freshwater	MTRALPDTPATLRARISMRVELARDLDPESLGYLLAHQRIAVLEHQLAAMEGPR*
(restricted) Ga0172372_100929947	3300013132	Freshwater	MSRPLPARLALPDTPATLRARISMRVELARDLDPESLGYLLAHQRIAVLERELAALEGPR
Ga0177922_102910182	3300013372	Freshwater	MKNGYKTEITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG*
(restricted) Ga0172376_100328898	3300014720	Freshwater	MTRPLPVVRALPDTPGTLRSRIQLRVELARDLHPDSLDYLLAHQRIADLERQLAAMEGSR
(restricted) Ga0172376_101458884	3300014720	Freshwater	MSRPLPARLALPDTPATLRARISMRVELARDLDSESLGYLLAHQRIAVLERELAALEGPR
Ga0181363_10572721	3300017707	Freshwater Lake	APAIPQTPGVLRSRIALRVELARDLDPETLDYLLAHQRIAELERELAKLEGRR
Ga0181363_10858092	3300017707	Freshwater Lake	MKNGYKPTITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0181352_11956493	3300017747	Freshwater Lake	MKRLPAAAAIPQTPGVLRARIALRVELARDLNPETLDYLLAHQRIAELERQLAALEGNR
Ga0181344_10267821	3300017754	Freshwater Lake	MKRFPAAPAIPQTPGVLRSRIALRVELARDLDPETLDYLLAHQRIAELERELAKL
Ga0181344_10793213	3300017754	Freshwater Lake	MKPLPAAPAILQTPGVLRARIALRVELARDLNPETLDYLLAHQRIAERERPLAA
Ga0181343_10806932	3300017766	Freshwater Lake	MSKPRYAPTVAQTPATLRSRIALRVELARDLDPESIGYLLAHQRIADLERQLAAMEGAR
Ga0181355_11491143	3300017785	Freshwater Lake	MKRFPAAPAIPQTPGVLRARIQLRVELARDLNPKTLDYLLAHQRIAELERELAKLEGRR
Ga0181359_100051118	3300019784	Freshwater Lake	MKRFPAAPAIPQTPGVLRSRIALRVELARDLNPKTLDYLLAHQRIAELERELAKLEGRR
Ga0194112_101150227	3300020109	Freshwater Lake	MSRPLPARLALPDTPATLRSRIQLRVELARDLNPDSLNYLLAHQRIAVLERELAAMEGRR
Ga0194124_101564061	3300020196	Freshwater Lake	RLALPDTPATLRSRIQLRVELARDLNPDSLNYLLAHQRIAVLERELAAMEGRR
Ga0194120_101896701	3300020198	Freshwater Lake	MSRPLPARLALPDTPATLRSRIQLRVELARDLNPDSLNYLLAHQRIAVLERELAAM
Ga0194129_100347061	3300020578	Freshwater Lake	PDTPATLRSRIQLRVELARDLNPDSLNYLLAHQRIAVLERELAAMEGRR
Ga0222714_1000959313	3300021961	Estuarine Water	MTRPLPTVRALPDTPATLRARIQLRVELARDLNPETLDYLLAHQRIAALEHQLAAMEGKR
Ga0222714_100504123	3300021961	Estuarine Water	MKRLPAAPAIPQTPGVLRARIQLRVELARDLDPHSLDYLLAHQRIAELERELAKLEGRR
Ga0222714_103205373	3300021961	Estuarine Water	MTRPLPTVRALPETAGTLRARIQLRVELARDLDPHTLDYLLAHQRIAALEHQLAALEGKR
Ga0222713_102193333	3300021962	Estuarine Water	MSRPLPAVRMLQETAGTLRSKIQLRVELARDLDPESLSYLLAHQRIAALEHQLAALEGGR
Ga0222712_100201865	3300021963	Estuarine Water	MTRPLPAVRALPDTPATLRARIQLRIELARDLNPETLDYLLAHQRIAALEHQLAAMEGKR
Ga0222712_102952493	3300021963	Estuarine Water	MKRFPAAPAIPQTPGVLRARIALRVELARDLNPETLDYLLAHQRIAELERELAKLEGRR
Ga0181353_10110251	3300022179	Freshwater Lake	MKRFPAAPAIPQTPGVLRSRIALRVELARDLDPKTLDYLLAHQRIAELERELAKLEGRR
Ga0181353_10377111	3300022179	Freshwater Lake	MKRFPAAPAIPQTPGVLRSRIALRVELARDLNPETLDYLLAHQRIAELERELAKLEANR
Ga0181353_10634212	3300022179	Freshwater Lake	MKSNGYKPTITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0181353_10876224	3300022179	Freshwater Lake	GTMKNGYKPTITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0181354_12278652	3300022190	Freshwater Lake	MKRLPAVRALPDTPATLRARIQLRVELARDLNPETLDYLLAHQRIAALEHQLAAMEGKR
Ga0196905_11791143	3300022198	Aqueous	MKRLPAAPAIKQTPGVLRARIALRVELARDLNPETLDYLLAHQRIAELERELAKLEGHR
Ga0208546_100013911	3300025585	Aqueous	MKRLPAATAIPQTPGVLRARIALRVELARDLDPHSLDYLLAHQRIAELERDLAKLEGNR
Ga0208546_10209573	3300025585	Aqueous	MKNGYKTEIHQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0208147_10696203	3300025635	Aqueous	MSRTLPSALALPNTPGTLRSRIQLRIELARDLDPESLAYLLAHQRIAALERELSAMEKRD
Ga0208783_102605033	3300025872	Aqueous	MIRLPATPAIPQTPGTLRARIALRVELARDLNPETLDYLLAHQRIAELERELAKLEATR
Ga0255160_10871163	3300026457	Freshwater	EITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQKMEG
Ga0255071_10062083	3300027127	Freshwater	MKSNGYKPEITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQAMEG
Ga0255099_10243375	3300027128	Freshwater	MKSNGYKPEITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQKMEG
Ga0255064_10150751	3300027138	Freshwater	MKSNGYKTEITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQKMEG
Ga0255063_100282311	3300027151	Freshwater	TMKSNGYKTEITQTPGTLRTRIALRVELARDLDPQSLDYLLAHQRIADLERQLQKMEG
Ga0255100_10294431	3300027152	Freshwater	MKSNGYKPEITQTPGTLRTRIALRVELARDLDTQSLGYLLAHQRIADLERQLQ
Ga0208975_100136615	3300027659	Freshwater Lentic	MKPLPAAPAIPQTPNVLRARIQLRVELARDLNPDSIDYLLAHQRIAELERELAKLEGNR
Ga0209668_105478131	3300027899	Freshwater Lake Sediment	MKRLPAAPAIPQTPGVLRSRIALRVELARDLNPETLDYLLAHQRIAELERQLAAL
Ga0255190_10372863	3300028083	Freshwater	MRRLPAAPAIPQTHGVLRARIALRVELARDLNPETLDYLLAHQRIAELERELAKLEGHR
Ga0315909_101569955	3300031857	Freshwater	MTRPLPAVRALPDTPGTLRARIQLRVELARDLHPDSLDYLLAHQRIAVLERQLAAMEGKR
Ga0315909_108591342	3300031857	Freshwater	MKRLPAVRALPDTPATLRSRIQLRVELARDLNPETLDYLLAHQRIAALEHQLAAMEGKR
Ga0315904_107560653	3300031951	Freshwater	MKRFPAAPAIPQTPGVLRSRIALRVELARDLNPETLDYLLAHQRIAELERELAALEGHR
Ga0315904_107978633	3300031951	Freshwater	MPPVRMLQETAGTLRSKIQLRVELARDLDPESLGYLLAHQRIAALEHQLAALEGGR
Ga0315901_111514773	3300031963	Freshwater	PPVRMLQETAGTLRSKIQLRVELARDLDPESLGYLLAHQRIAALEHQLAALEGGR
Ga0315903_102331261	3300032116	Freshwater	MKRLPAVRALPDTPATLRARIQLRVELARDLNPETLDYLLAHQRIAVLERQLAAMEGKR
Ga0316627_1004967703	3300033482	Soil	MTRPIPAVRALPDTPATLRARIQLRVELARDLDPETLDYLLAHQRIAALEHQLAAMEGKR
Ga0316616_1005766563	3300033521	Soil	MTRPIPAVRALPDTPATLRARIQLRVELARDLNPETLDYLLAHQRIAALEHQLAAMEGQR
Ga0316617_1004558213	3300033557	Soil	MTRPIPAVRALPDTPATLRARIQLRVELARDLNPETLDYLLAHQRIAALEHQLAALEGKR
Ga0334981_0224221_588_761	3300033980	Freshwater	MKSNGYKPTITQTPGTLRTRIALRVELARDLDPQSLGYLLAHQRIADLERQLQKMEG
Ga0334982_0012295_1583_1756	3300033981	Freshwater	MKSNGYKPEITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0334982_0030524_439_618	3300033981	Freshwater	MKRLPAAHAIPQTPGVLRARIALRVELARDLNPETLDYLLAHQRIADLERQLAALEGRQ
Ga0334982_0096837_958_1137	3300033981	Freshwater	MKHLPAAHAIPQTPGVLRARIQLRVELARDLNPKTLDYLLAHQRIAELERELAKLEGNR
Ga0334982_0270843_617_796	3300033981	Freshwater	MKPLPAAPAIPQTPGVLRSRIALRVELARDLDPHSLDYLLAHQRIAELERELAKLEGRR
Ga0334982_0322020_362_541	3300033981	Freshwater	MKPLPVAPAIPQTPGVLRARIQLRVELARDLNPDSIGYLLAHQRIAELERQLAALEGNR
Ga0334996_0000207_10799_10978	3300033994	Freshwater	MKPLPAAPAIPQTPGVLRARIQLRVELARDLNPETLDYLLAHQRIAELERELAKLEGRR
Ga0334986_0019899_1125_1295	3300034012	Freshwater	MKNGYKTEITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0334986_0154045_3_176	3300034012	Freshwater	MKSNGYKPEITQTPGTLRTRIALRVKLARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0334986_0191346_134_313	3300034012	Freshwater	MKRFPAAPAIPQTPGVLRARIQLRVELARDLNPKTLDYLLAHQRIAELERQLAALECHR
Ga0334986_0444046_259_438	3300034012	Freshwater	MKPLPAAPAIPQTPGVLRARIQLRVELARDLNPDSIGYLLAHQRIAELERQLAALEGHR
Ga0334998_0101421_1494_1673	3300034019	Freshwater	MKRFPAAPAIPQTPGVLRARIQLRVELARDLNPDSIGYLLAHQRIAELERQLAALECHR
Ga0334998_0328664_61_240	3300034019	Freshwater	MKRFPAAPAIPQTPGVLRSRIALRVELARDLNPKTLDYLLAHQRIAELERELATLEGNR
Ga0334987_0013743_6153_6326	3300034061	Freshwater	MKSNGYKPEITQTPGTLRTRIALRVELARDLDPQSLDYLLAHQRIADLERQLQKLEG
Ga0335000_0008756_5754_5927	3300034063	Freshwater	MKSNGYKSTITQTPGTLRTRIALRVELARDLDPQSLDHLLAHQRIADLERQLQKMEG
Ga0335000_0111067_1503_1682	3300034063	Freshwater	MKPLPAALAIPQTPGVLRARIALRVELARDLNPDSIGYLLAHQRIAELERQLAALEGCR
Ga0335000_0230656_1024_1173	3300034063	Freshwater	MKHLPAAHAIPQTPGVLRARIQLRVELARDLNPDSIGYLLAHQRIAELER
Ga0335027_0126385_1695_1874	3300034101	Freshwater	MKRLPAAHAIPQTPGVLRARIQLRVELARDLNPKTLDYLLAHQRIAELERQLAALEGHR
Ga0335027_0402035_630_809	3300034101	Freshwater	MKRFPAAPAIPQTPGVLRARIQLRVELARDLNPDSIGYLLAHQRIAELERQLAALEGNR
Ga0335029_0644754_33_212	3300034102	Freshwater	MKPLPAAPAIPQTPGVLRARIQLRVELARDLNPETLDYLLEHQRIAELERQLAALEGNR
Ga0335030_0001318_19630_19812	3300034103	Freshwater	MSKPMPPVRMLQETAGTLRSKIQLRVELARDLHPDSLSYLLAHQRIAVLEHQLAALEGGR
Ga0335030_0198935_210_389	3300034103	Freshwater	MKRFPAAPAIPQTPGVLRSRIALRVELARDLNPKTLDYLLAHQRIAELERELAKLEGNR
Ga0335030_0464478_520_699	3300034103	Freshwater	MKRFPAAPAIPQTPGVLRARIQLRVELARDLNPETLDYLLAHQRIAELERELAKLEGRR
Ga0335031_0721716_246_428	3300034104	Freshwater	MTRPLPAVRALPDTPATLRARIQLRVELARDLDPETLDYLLAHQRIAALEHQLAAMEGKR
Ga0335063_0286240_721_879	3300034111	Freshwater	MKPLPAAPAIPQTPGVLRARIQLRVELARDLNPKTLDYLLAHQRIAELERELA
Ga0335054_0275005_569_748	3300034119	Freshwater	MKPLPAAHAIPQTPGVLRARIQLRVELARDLNPKTLDYLLAHQRIAELERELAKLEGNR
Ga0335056_0004087_4014_4193	3300034120	Freshwater	MKPLHYAPTVAQTPATLRSRIALRVELARDLDAESIGYLLAHQRIADLERQLAAMEAKP
Ga0335048_0086850_3_164	3300034356	Freshwater	MKPLPAALAIPQTPGVLRARIALRVELARDLNPDSIGYLLAHQRIADLERQLAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters