Metagenome / Metatranscriptome Family F088759

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088759
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	82 residues
Representative Sequence	KSETMYLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Number of Associated Samples	100
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	97.25 %
% of genes from short scaffolds (< 2000 bps)	88.99 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.165 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (8.257 % of family members)
Environment Ontology (ENVO)	Unclassified (33.028 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.202 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.85% β-sheet: 14.68% Coil/Unstructured: 61.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01156	IU_nuc_hydro	13.76
PF00941	FAD_binding_5	7.34
PF03486	HI0933_like	6.42
PF00860	Xan_ur_permease	4.59
PF13620	CarboxypepD_reg	3.67
PF13561	adh_short_C2	2.75
PF08531	Bac_rhamnosid_N	2.75
PF01904	DUF72	2.75
PF06718	DUF1203	1.83
PF03450	CO_deh_flav_C	0.92
PF01381	HTH_3	0.92
PF07978	NIPSNAP	0.92
PF00156	Pribosyltran	0.92
PF05258	DciA	0.92
PF01042	Ribonuc_L-PSP	0.92
PF14542	Acetyltransf_CG	0.92
PF01979	Amidohydro_1	0.92
PF00795	CN_hydrolase	0.92
PF14520	HHH_5	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	13.76
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	12.84
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	12.84
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	6.42
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	6.42
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	6.42
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	6.42
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	6.42
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	6.42
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	6.42
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	6.42
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	6.42
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	6.42
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.75
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.92
COG5512	Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives)	General function prediction only [R]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.17 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.34 %
Unclassified	root	N/A	1.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	49.54 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.75 %
Unclassified	root	N/A	1.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.54 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.42 %
Unclassified	root	N/A	1.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.92 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.50 %
Unclassified	root	N/A	1.83 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.92 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.92 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.50 %
Unclassified	root	N/A	1.83 %
Gluconobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconobacter	0.92 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.92 %
Acidobacteriales bacterium 13_2_20CM_2_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.54 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.50 %
Unclassified	root	N/A	1.83 %
Gluconobacter thailandicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconobacter → Gluconobacter thailandicus	0.92 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.92 %
Acidobacteriales bacterium 13_2_20CM_2_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10375986	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300003367\|JGI26338J50219_1008035	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300004082\|Ga0062384_101178384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300004092\|Ga0062389_104352076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Gluconobacter → Gluconobacter thailandicus	533	Open in IMG/M
3300004463\|Ga0063356_102117789	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300004479\|Ga0062595_102102540	Not Available	549	Open in IMG/M
3300005093\|Ga0062594_102355465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005167\|Ga0066672_10495127	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005175\|Ga0066673_10207721	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300005329\|Ga0070683_100938434	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005331\|Ga0070670_101389477	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300005344\|Ga0070661_100892424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	733	Open in IMG/M
3300005367\|Ga0070667_100844361	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005437\|Ga0070710_11195433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005441\|Ga0070700_101962286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300005455\|Ga0070663_100377775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300005526\|Ga0073909_10522642	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005536\|Ga0070697_100854006	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005563\|Ga0068855_100578269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1213	Open in IMG/M
3300005563\|Ga0068855_101789467	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005718\|Ga0068866_10373558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300005843\|Ga0068860_100961625	Not Available	871	Open in IMG/M
3300005844\|Ga0068862_100334650	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300006052\|Ga0075029_100400205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	892	Open in IMG/M
3300006642\|Ga0075521_10057588	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300006845\|Ga0075421_102462651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300006854\|Ga0075425_101112583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	899	Open in IMG/M
3300006854\|Ga0075425_102872404	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006904\|Ga0075424_100025033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6140	Open in IMG/M
3300006904\|Ga0075424_101808351	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300007004\|Ga0079218_10407472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1161	Open in IMG/M
3300009092\|Ga0105250_10474539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300009093\|Ga0105240_10786576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300009102\|Ga0114948_10949795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300009553\|Ga0105249_13046191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300010361\|Ga0126378_10200181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2073	Open in IMG/M
3300010398\|Ga0126383_11158055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300010399\|Ga0134127_12218911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300010403\|Ga0134123_10196562	All Organisms → cellular organisms → Bacteria → Acidobacteria	1712	Open in IMG/M
3300011112\|Ga0114947_10552104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300011119\|Ga0105246_11054186	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300012205\|Ga0137362_10017120	All Organisms → cellular organisms → Bacteria	5495	Open in IMG/M
3300012922\|Ga0137394_11341341	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300012924\|Ga0137413_10339648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1062	Open in IMG/M
3300012929\|Ga0137404_10532681	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300012930\|Ga0137407_11896994	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012944\|Ga0137410_11315893	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300012958\|Ga0164299_11322806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300012960\|Ga0164301_11186337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300012989\|Ga0164305_12058580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300013297\|Ga0157378_12639133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300013306\|Ga0163162_10160910	All Organisms → cellular organisms → Bacteria → Acidobacteria	2367	Open in IMG/M
3300014489\|Ga0182018_10374231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300014657\|Ga0181522_10120676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1523	Open in IMG/M
3300015245\|Ga0137409_10241039	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300015245\|Ga0137409_10701086	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300015264\|Ga0137403_10013213	All Organisms → cellular organisms → Bacteria → Acidobacteria	9022	Open in IMG/M
3300018482\|Ga0066669_10578085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300021088\|Ga0210404_10053702	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300021170\|Ga0210400_10084665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2495	Open in IMG/M
3300021171\|Ga0210405_10049353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3333	Open in IMG/M
3300021180\|Ga0210396_10169366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1958	Open in IMG/M
3300021181\|Ga0210388_10668649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300021475\|Ga0210392_10994356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_2_55_5	628	Open in IMG/M
3300021477\|Ga0210398_10940859	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300023019\|Ga0224560_104470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300024227\|Ga0228598_1127982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300025461\|Ga0208851_1088108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300025878\|Ga0209584_10010260	All Organisms → cellular organisms → Bacteria → Acidobacteria	3084	Open in IMG/M
3300025899\|Ga0207642_10087896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1527	Open in IMG/M
3300025917\|Ga0207660_10082703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2362	Open in IMG/M
3300025917\|Ga0207660_10750618	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300025921\|Ga0207652_10940781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300025925\|Ga0207650_11003448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300025941\|Ga0207711_10040744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3952	Open in IMG/M
3300025942\|Ga0207689_10759952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300025945\|Ga0207679_11872807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300026088\|Ga0207641_11307493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300026118\|Ga0207675_102236475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300026358\|Ga0257166_1071328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300027567\|Ga0209115_1063451	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300027625\|Ga0208044_1166378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300027698\|Ga0209446_1068848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300027768\|Ga0209772_10141756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300027855\|Ga0209693_10182803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300027879\|Ga0209169_10617361	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300027886\|Ga0209486_10206675	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300028792\|Ga0307504_10370258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300028828\|Ga0307312_10742350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300029951\|Ga0311371_11503766	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300029984\|Ga0311332_10386890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300029984\|Ga0311332_10904566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300030056\|Ga0302181_10099884	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300030815\|Ga0265746_1008493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300030838\|Ga0311335_10869536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300030838\|Ga0311335_11170192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300030943\|Ga0311366_11280357	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031446\|Ga0170820_16481521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300031576\|Ga0247727_11009098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300031716\|Ga0310813_11066126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300031754\|Ga0307475_11533913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300032074\|Ga0308173_11038889	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300032180\|Ga0307471_100337151	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300032180\|Ga0307471_102085476	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032205\|Ga0307472_100020845	All Organisms → cellular organisms → Bacteria	3589	Open in IMG/M
3300032205\|Ga0307472_100903892	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300032828\|Ga0335080_12065212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300032892\|Ga0335081_11607543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300032897\|Ga0335071_10016845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7415	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.39%
Host-Associated	Host-Associated	26.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.14%
Plants	Host-Associated → Plants	26.61%
Aquatic	Environmental → Aquatic	8.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.09%
Peat	Environmental → Terrestrial → Peat	6.42%
Freshwater	Environmental → Aquatic → Freshwater	5.50%
Marine	Environmental → Aquatic → Marine	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%
Cave	Environmental → Terrestrial → Cave	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.12%
Loam	Environmental → Terrestrial → Soil → Loam	11.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.01%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.59%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.67%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.75%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009102	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR04 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011112	Deep subsurface microbial communities from Mariana Trench to uncover new lineages of life (NeLLi) - CR02 metaG	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_103759862	3300001686	Soil	IDPAVIKMSETMYLDVDTSHGPSYGHTLIWKPQPDVPSFFLPYSGPEGADRSKWVGHLTAPVHLHPASVQMEVDAQKFDDIFVSIMSH*
JGI26338J50219_10080351	3300003367	Bog Forest Soil	GHTVVWKKPEDLPTFFLPYSGPRPVDREKWLGHLTPPPALHPASVHTEVDAEKFMKFFVMSMSR*
Ga0062384_1011783841	3300004082	Bog Forest Soil	DVDIDHGPTYGHTVVWKKPEEIPTFFLPYSGPRPVDREKWMGHLTPPAGLHPASVQTEVDVEKFMKFFVMSMSR*
Ga0062389_1043520761	3300004092	Bog Forest Soil	ASLIDPAVIKKSETMYLDVDIDHGPTYGHTVVWKKPEEIPTFFLPYSGPRPVDREKWMGHLTPPAGLHPASVQTEVDVEKFMKFFVMSMSR*
Ga0063356_1021177891	3300004463	Arabidopsis Thaliana Rhizosphere	VIKKSETMYLDVDIDHGPKYGHTVTWKKPDDVPQFFLPYSGPDAPDREKWLSHLAPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0062595_1021025402	3300004479	Soil	ISHGPSYGHTLVWKKPTQMPDWFLPYSGPEAPDRSKWAGHLTPPEQLHPASVQLEVDVKKFESIFVDIMSH*
Ga0062594_1023554652	3300005093	Soil	DVDITHGPKYGHTVVWRPPDGVPSFFEAYSGPDPPDAAKWKGHLAPPAHLRPATVHMEVDIPRFEQVFVDLMSRK*
Ga0066672_104951271	3300005167	Soil	TVIKKSETMYLDVDITHGPKYGHTVIWKPSADVPKFFLPYSGPQGADRAKWLGHLTPPPQLHPAHVQMEVDVAKFEKIFVELMSQ*
Ga0066673_102077211	3300005175	Soil	RKSETMYLDVDITHGPKYGHTVVWKKPSDVPQFMMPYSSPDGPDREKWLSHLTPPSQLHPASVQMEVDVKRFEDDFVEMMSQ*
Ga0070683_1009384342	3300005329	Corn Rhizosphere	TMYLDVDISHGPKYGHTVIWKKPEDVPQFFLPYSGPDGPDREKWLSHLAPPPQLHPASVQMEVDVKKFEDIFVQTMSH*
Ga0070670_1013894771	3300005331	Switchgrass Rhizosphere	TMYLDVDITHGPSYGHTVVWKKPDDVPEFFLAYSGPDGPDRSKWLGHLTPPPHLHPANVQMEIDQKKFDDVFVEMMSQ*
Ga0070661_1008924242	3300005344	Corn Rhizosphere	KKSETLYLDVDITHGPKYGHTVVWRPPAGVPSFFEAYSGPEPPDPEKWQGHLAPPAHLHPATVHMEVDIPRFEQVFVDLMSRP*
Ga0070667_1008443611	3300005367	Switchgrass Rhizosphere	ETMYLDVDISHGPKYGHTVIWKKPEDVPQFFLPYSGPDGPDREKWLSHLAPPPQLRPASVQMKVDVQKFEDIFVQIMSH*
Ga0070710_111954332	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DELLVAALIDPSVIQESETMYFDVDIEHGPKYGDTVVWKQPEEIPTFFLPYSGPRPRDDAKWQDHLTPPEQLHPASVETKVNVAKFEDVFVSLMSH*
Ga0070700_1019622861	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VDITHGPKYGHTVVWRAPAGVPSFFEAYSGPDPPDPEKWKSHLTPPAHLHPATVHLEVDIPRFEQVFVDLMSRP*
Ga0070663_1003777752	3300005455	Corn Rhizosphere	MYLDVDIDHGPKYGHTVIWKKPDDVPQFFLSYSGPEAPDREKWLSHLSPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0073909_105226422	3300005526	Surface Soil	ILYPSVIKKSETMYLDVDITHGPKYGHTVVWKPLEDVPEFFLAYSGPRPVDKEKWRGHLTPPAQLHPASVQMEVDVEKFEKIFVDLMSH*
Ga0070697_1008540062	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ETMYLDVDITHGPKYGHTVVWKPLDDVPEFFLAYSGPRPVNKEKWKGHLIPPAHLHPASVQMEVDVEKFEKIFVVLMSH*
Ga0068855_1005782691	3300005563	Corn Rhizosphere	WDELTVASILDPSVIKKSEAMYLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0068855_1017894671	3300005563	Corn Rhizosphere	WDELTVASILDPSVIKKSEAMYLDVDIDHGPKYGHTVIWKKPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0068866_103735582	3300005718	Miscanthus Rhizosphere	PSVIKKSETLYLDVDITHGPKYGHTVVWRPPAGVPSFFEAYSGPDPPDAAKWKGHLDPPAHLRPATVHMEVDIPRFEQVFVDLMSRK*
Ga0068860_1009616252	3300005843	Switchgrass Rhizosphere	THGPSYGHTVIWKKPDDVPEFFLSYSGPDGPDRSKWLGHLMPPAHLHPANVQMEIDQKKFEDVFVEMMSQ*
Ga0068862_1003346501	3300005844	Switchgrass Rhizosphere	VIKKSETLYLDVDITHGPKYGHTVVWRPPDGVPSFFEAYSGPDPPDAAKWKGHLAPPAHLRPATVHMEVDIPRFEQVFVDLMSRK*
Ga0075029_1004002052	3300006052	Watersheds	TMYLDVDITHGPKYGHTVVWKPSEQVQHFFLPYSGPRGVDTAKWQDHLTPPPQLHAAAVQTEVDVPRFENLFVELMTH*
Ga0075521_100575881	3300006642	Arctic Peat Soil	ASLIDPSVVSKSETMYLDVDISHGPKYGHTVIWKPPADVPAFFLPYSGPDAVDREKWKGHLEPPAQLHPATVQMEVDAAKFENIFVGLMSH*
Ga0075421_1024626511	3300006845	Populus Rhizosphere	MWDEVLAAALVDPSVIRKSETLYLDADITHGPKYGHTVVWRPPDGVPSFFEAYSGPEPPDPEKWKGHLVPPEHLHPATVHMEVDIPRFEQVFLDLMSRP*
Ga0075425_1011125832	3300006854	Populus Rhizosphere	VIRKSETMYLDVDIDHGPKYGHTVVWKKPEDVPKFFLAYSGPQGPDRNKWLDHLAPPFQLHPASVQVDVDVKKFEDIFVNLMSK*
Ga0075425_1028724041	3300006854	Populus Rhizosphere	ETMYLDVDITHGPKYGHTAVWKPLDEIPAFFLAYSGPRPVDKEKWKGHLIPPAHLHPASVQMEVDVEKFEKIFVDMMSH*
Ga0075424_1000250331	3300006904	Populus Rhizosphere	KKSETRYLDVDIDHGPKYGHTVIWKKPDDVPQFFLSYSGPEAPDREKWLSHLAPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0075424_1018083512	3300006904	Populus Rhizosphere	LDVDITHGPSYGHTLLWKKPEDGPQFFLPYSGPDGPDRSKWAGHLTPPVQLHPASVQMEVDVKKFEDVFVDMMSH*
Ga0079218_104074722	3300007004	Agricultural Soil	DEILVAAILDPSVIKKSETKYLDVDITHGPKYGHTVVWTPPLEVPTFFLAYSGPNGADPAKWQGHLVPPSHLHPATVHMEVDVTKFQDIFVELMSR*
Ga0105250_104745392	3300009092	Switchgrass Rhizosphere	TVASILDPSVIKKSEAMHLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0105240_107865761	3300009093	Corn Rhizosphere	ILEPSVIKKLETRYPDVDIDHGPKYGHTVIWKKPDDVPQFFLSYSGPEAPDREKWLSHLAPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0114948_109497951	3300009102	Deep Subsurface	ITHGPKYGHTVVWARPDGELSFFLPYSGPGPMDRSKWAQHLEPPAHLQPAEVQMEADIGRFEDLFVELMSQ*
Ga0105249_130461911	3300009553	Switchgrass Rhizosphere	HGPKYGHTVTWKKPDDVPQFFLPYSGPDAPDREKWLSHLAPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0126378_102001811	3300010361	Tropical Forest Soil	DELLVTALIDPSVIRESETMYLDVDIQHGPKYGDTVIWKQPTEVPTFFLPYSGPRPRDDAKWQGHLMPPKELHPANVETKVDVAKFEDVFVNLMSH*
Ga0126383_111580551	3300010398	Tropical Forest Soil	MGDELTVASIFHPAVIAKFESMYLYRGITYRQKYGHTVVWKKPADVPQFMMPYSGPDGPDREKWLSHFTPPSHLHPASVQIEVDVKRFEDDFVEMMSQ*
Ga0134127_122189111	3300010399	Terrestrial Soil	KSETMYLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0134123_101965623	3300010403	Terrestrial Soil	THGPKYGHTVVWRPPAGVPSFFEAYSGPEPPDPEKWKGHLAPPAHLHPATVHMEVDIPRFEQVFVDLMSRP*
Ga0114947_105521041	3300011112	Deep Subsurface	TETRTLWLDVDITHGPKYGHTVVWTRPRGELSFFLPYSGPGPIDQSKWAEHLEPPAHLQPAEVQMEADIERFEDLFVKLMSQ*
Ga0105246_110541862	3300011119	Miscanthus Rhizosphere	AVASMVDPSVVKKSETMYLDVDITHGPSYGHTVIWKKPDDVPEFFLSYSGPDGPDRSKWLGHLMPPAHLHPANVQMEIDQKKFEDVFVEMMSQ*
Ga0137362_100171206	3300012205	Vadose Zone Soil	LTVASILDPSVIKKSETMYLDVDITHGPKYGHTVVWKPLDEVHEFFLAYSGPRPVDKEKWKGHLIPPAHLHPASVQMEVDVE*
Ga0137394_113413412	3300012922	Vadose Zone Soil	DIEHGPKYGHTVVWKRANDVPEFFLAYSGPRPVDREKWLEHLRPPAHLHAASVQMDVDVAKFEKIFINLMSH*
Ga0137413_103396482	3300012924	Vadose Zone Soil	VASILDPSVIKKSETMYLDVDITHGPKYGHTVVWKPLEDVPEFFLAYSGPRPVDKEKWKGHLTPPAQLHPASVQMQVDVEKFEQIFVDLMSH*
Ga0137404_105326811	3300012929	Vadose Zone Soil	VDIEHGPKYGHTVVWKRANDVPEFFLAYSGPRPVDREKWLEHLRPPAHLHAASVQMDVDVAKFEKIFINLMSH*
Ga0137407_118969941	3300012930	Vadose Zone Soil	IGHGPKYGHTVVWKRVNDVPEFFLAYSGPRPGDREKWLGHLRPPAHLHTANVQMEADAAKFEKIFIDLISH*
Ga0137410_113158932	3300012944	Vadose Zone Soil	GPQYGHTVVWKRANDVPEFFLAYSGPRPVDREKWLGHLRPPAHLHAASVQTDVDLAKFEKIFINLMSH*
Ga0164299_113228062	3300012958	Soil	MGASIGDPSVIKKSETMYLDVDIEHGPKHGHTVVWKKTEDVPDFFLAYSSPQGPDRSKWLGHLAPPPQLQRATVQMDVDVKKF
Ga0164301_111863371	3300012960	Soil	KKSETMYLDVDISHGPKYGHTVIWKKPEDVPQFFLPYSGPDGPDREKWLSHLAPPPQLHAASVQMEVDVKKFEDIFVQTMSH*
Ga0164305_120585802	3300012989	Soil	WDELTVASIIDPAVIRKSKTMYLDVDITHGPDYGHTVVWKKPRGVTEFMMPYSGPDGPDPAKWQSHLTPPAHLHPATVQMEVDVPRFEDDFVEMMSQ*
Ga0157378_126391331	3300013297	Miscanthus Rhizosphere	LDPSVIKKSEAMYLDVDIDHGPKYGHTVIWKKPDDVPQFFLPYSGPDAPDREKWLSHLAPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0163162_101609102	3300013306	Switchgrass Rhizosphere	DVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ*
Ga0182018_103742311	3300014489	Palsa	PKYGDTVVWKQKGSGPVFFLPYSGPGGPDREKWKGHLTPPSQLHPARVQMEVDAEKFDNIFVDLMSH*
Ga0181522_101206761	3300014657	Bog	IDPSVITRSETMYLDVDIDHGPKYGHTVVWKQPDGVPKFFLPYSGPNPPDPAKWAGHLKPPPQLHPASVQMDVDKAKFEKMFVDIMSH*
Ga0137409_102410391	3300015245	Vadose Zone Soil	VDITHGPKYGHTVVWKPSADVPEFFLAYSGPRPVDTEKWKGHLTPPAHLHPASVQMEVDVEKFEKLFVDSMSR*
Ga0137409_107010861	3300015245	Vadose Zone Soil	VDIEHGPKYGHTVVWKSANDVPEFFLAYSGPRPVDREKWLGHLRPPAHLHAASVQTDVDLAKFEKIFINLMSH*
Ga0137403_100132131	3300015264	Vadose Zone Soil	ETMYLDVDITHGPKYGHTVVWKPLDEIPAFFLAYSGPRPVDKEKWKGHLIPPAHLHPATVQMEVDVEKFEKLFVDLMSH*
Ga0066669_105780852	3300018482	Grasslands Soil	ETMYLDVDITHGPKYGHTVVWKPQDVVPEFFLAYSGPRPVDKEKWKDHLTPPAQLHAANVQIEVDVEQFEKLFVDLMSH
Ga0210404_100537021	3300021088	Soil	PKYGHTVVWTPPADVPTFFLPYSGPAPRDREKWLSHMNPPVNLHPARVQMIVDVERFQKVFVDLLSH
Ga0210400_100846653	3300021170	Soil	LLVASLIDPTVIKKSETMYLDVDIDHGATYGHTLVWKKPEEIPTFFLPYSGPRPVDREKWMGHLTPPAGVHPASVQTEVDVEKFTKFFVMSMSR
Ga0210405_100493534	3300021171	Soil	IDPTVIKKSETMYLDVDIDHGATYGHTLVWKKPEEIPTFFLPYSGPRPVDREKWMGHLTPPAGVHPASVQTEVDVEKFTKFFVMSMSR
Ga0210396_101693661	3300021180	Soil	PTVIKKSETMYLDVDIDHGTTYGQTVVWKKPEEIPTFFLPYSGPRPVDREKWIGHLMPPAGVHPASVQTEVDAEKFMKFFVMSMSR
Ga0210388_106686491	3300021181	Soil	VIKKSETMWLDVDTSHGPKYGDTVVWKKPDGMLKFFLPYSGPAGPDKAKWAGHLVPPAWLHPAEVQMEVDEEKFDDLFVRVMTE
Ga0210392_109943562	3300021475	Soil	TKSETMYLDVDIGHGPKYGHTVVWQQAPVPNFFLPYSGPQAVDLEKWKNHLAPPAQLHPANVQINVDVQKFEDLFVQIMSH
Ga0210398_109408591	3300021477	Soil	YGDTVIWKKPDRLPTFFLPYSGPRPVDREKWMAHLTPPAELHPASVQTDVDVEKFRRFFVMSMSR
Ga0224560_1044701	3300023019	Soil	VVTKSETMYLDVDISHGPDYGHTVVWKKPENIPHFFLPYSGPGGPDRNKWLGHLMPPPQLHPASVQMEVDKTKFEKIFVDLMSH
Ga0228598_11279821	3300024227	Rhizosphere	SLIDPSVIKKSETMYFDVDIEHGPKYGHTVVWKKPEDMPTFFLAYSGPRPVDREKWMGHLTPPAAVQPASVQTEVDAEKFMRFFVMSMTR
Ga0208851_10881081	3300025461	Arctic Peat Soil	PSVIEKSETMYLDVDITHGPKYGHTVVWKPADEVPQFFLPYSGPRPVDKEKWKAHLTPPEQLHPASVQMKVDVEKFEKLFVNLMSH
Ga0209584_100102604	3300025878	Arctic Peat Soil	PSVVSKSETMYLDVDISHGPKYGHTVIWKPPADVPAFFLPYSGPDAVDREKWKGHLEPPAQLHPATVQMEVDAAKFENIFVGLMSH
Ga0207642_100878961	3300025899	Miscanthus Rhizosphere	ELTVAYILDPSVIKKSEAMYLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0207660_100827032	3300025917	Corn Rhizosphere	DPSVIKKSETRYLDVDIDHGPKYGHTVIWKKPDDVPQFFLSYSGPEAPDREKWLSHLAPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0207660_107506182	3300025917	Corn Rhizosphere	DVDITHGPKYGHTVVWRPPAGVPSFFEAYSGPEPPDPEKWKGHLAPPAHLHPATVHMEVDIPKFEQVFVDLMSRP
Ga0207652_109407812	3300025921	Corn Rhizosphere	MYLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0207650_110034482	3300025925	Switchgrass Rhizosphere	SETMYLDVDITHGPSYGHTVVWKKPDDVPEFFLAYSGPDGPDRSKWLGHLTPPPHLHPANVQMEIDQKKFDDVFVEMMSQ
Ga0207711_100407443	3300025941	Switchgrass Rhizosphere	EAMYLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0207689_107599521	3300025942	Miscanthus Rhizosphere	PSVIKKSEAMYLDVDIDHGPKYGHTVIWKKPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0207679_118728072	3300025945	Corn Rhizosphere	EAMYLDVDIDHGPKYGHTVIWKKPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0207641_113074931	3300026088	Switchgrass Rhizosphere	SVIKKSEAMYLDVDIDHGPKYGHTVIWKKPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0207675_1022364751	3300026118	Switchgrass Rhizosphere	HNALTVASILDPSVIKKSETRYLDVDIDHGPKYGHTVIWKQPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVQVMAH
Ga0257166_10713281	3300026358	Soil	SVIKKSETMYLDVDITHGPKYGHTVVWKPLDEVPEFFLAYSGPRPVDKEKWKDHLIPPAHLHPATVQMEVDVEKFERIFVDLMSH
Ga0209115_10634511	3300027567	Forest Soil	IDPAVIKKSETMYLDVDISHGPSYGHTVVWKKPEDLPHFFLPYSGPDGPDNDKWAGHLMPPPQLHPASVQMEVDKTKFDRIFVDLMSH
Ga0208044_11663781	3300027625	Peatlands Soil	TMYLDVDISHGPKYGHTVVWKPPADVPTFFLPYSGPDGVNREKWKGHLDPPAHLHPATVQMEVDATKFENIFVDLMSH
Ga0209446_10688481	3300027698	Bog Forest Soil	MYLDVDIEHGPKYGHTVVWKKPEEIPTFFLAYSGPRPVDREKWMGHLTPPAGLHPASVQTEVDVEQFRKFFVMAMSR
Ga0209772_101417562	3300027768	Bog Forest Soil	ELLVAALIDPSVIKESETMYLDADIEHGPKYGYTVVWKQPKEVPAFFLPYSGPRPRDDEKWASHLKPPVQLHPASVETKVDVAKFENIFVELMSH
Ga0209693_101828031	3300027855	Soil	VAALIDPSVIQESETMYLDVDIEHGPKYGDTVVWKQPEEIPTFFLPYSGPRPRDDAKWQDHLTPPEQLHPANVETKVNVAKFEDVFVNLMSH
Ga0209169_106173611	3300027879	Soil	VASLIDPTVIKKSETMYLDVDTDHGPKYGDTVIWKKPDRLPTFFLPYSGPRPVDREKWMAHLTPPAELHPASVQTDVDVEKFRRFFVMSMSR
Ga0209486_102066751	3300027886	Agricultural Soil	HGPKYGHTVVWTPPLEVPTFFLAYSGPNGADPAKWQGHLVPPSHLHPATVHMEVDVTKFQDIFVELMSR
Ga0307504_103702582	3300028792	Soil	DPTVIKKSEEMYLDVDIEHGPQYGHTGVWKKASDVPEFFLAYSGPRPVDREKWLGHLRPPAHLHPASVQMEADAAKFEKIFIDLMSH
Ga0307312_107423502	3300028828	Soil	IRKSEIMYLDVDINHGPKYGHTVVWKKPEDVPQFFLAYSSPEGPDRSKWLGHLAPPPQLHPASVQMEVDVKKFEDIFVKLMSE
Ga0311371_115037661	3300029951	Palsa	DISHGPKYGYTMVWKQPEGMPKFFLPYSGPNPPDRAKWASHLVPPAQLNPASVQMEVDEEKFDDLFVRIMTH
Ga0311332_103868901	3300029984	Fen	SVIKKSQTMYLDVDITHGPSYGHTLIWRPEADVPHFFLPYSGPDGPDRSKWVGHLTAPANLHPANVQMEVDVKKFEDVFVAMMSH
Ga0311332_109045662	3300029984	Fen	VASILDPSVIEKSETMYFDVDITHGPKYGHTVVWKPSDEVPQFFLAYSGPRGVDKEKWKAHLTPPGQLHPASVQMKVNIEKFEKLFVNLMSH
Ga0302181_100998841	3300030056	Palsa	DEVMVASLIDPAVIKKSETMYLDVDISHGPKYGYTMVWKQPDGMPKFFLPYSGPNPPDRVKWASHLVPPAHLNPASVQMEVDEEKFDDLFVRIMTH
Ga0265746_10084932	3300030815	Soil	MYLDVDLSHGPDYGHTVVWKKPEDIPHFFLPYSGPGGPDREKWLGHLIPPPQLHPASVQMEVDKTKFEKIFVDLMSH
Ga0311335_108695361	3300030838	Fen	WDELTVASLIDPSVIKKSQTMYLDVDITHGPSYGHTLIWRPEADVPHFFLPYSGPDGPDRSKWVGHLTAPANLHPANVQMEVDVKKFEDVFVAMMSH
Ga0311335_111701921	3300030838	Fen	ELTVASILDPSVIEKSETMYLDVDITHGPKYGHTVVWKPSDEVPQFFLAYSGPRGVDKEKWKTHLTPPEQLHPASVQMKVDVEKFEKLFVNLMSH
Ga0311366_112803571	3300030943	Fen	GHTVVWKPSNEVPQFFLAYSGPHGVDKEKWKTHLTPPEQLHPASVQMKVDVEKFEKLFVNLMSH
Ga0170820_164815211	3300031446	Forest Soil	VAALIDPSVIQESETMYLDVDIEHGPKYGDTVVWRQPEEVPTFFLPYSGPLPRDDAKWQDHLMPPTQLHPASVEVKVNVAKFEDVFVNLMSH
Ga0247727_110090981	3300031576	Biofilm	YLDVDITHGPKYGQTVVWKQPDSVPTFFQAYSGPDAPDHGKWKAHLAPPSHLHPASVHMEVDVPKFEKVFVELMSRP
Ga0310813_110661261	3300031716	Soil	KSEGMYLDVDIDHGPKYGHTVIWKKPDDVPQFFLPYSGPDAPDREKWLSHLTPPPQLHPASVQMEVDVKKFEDIFVRVMGQ
Ga0307475_115339131	3300031754	Hardwood Forest Soil	IDPSVIQESETMYLDVDIQHGPKYGDTVVWRQRKEIPAFFLPYSGPRPRDDTKWQDHLTPPEQLHPANVETKVDVAKFEGIFVNLMSH
Ga0308173_110388893	3300032074	Soil	VDITHGPKYGHTVVWKKPSDVPQFMMPYSSPDGPDREKWLSHLTPPSQLHPASVQMEVDVKRFEDDFVEMMSQ
Ga0307471_1003371511	3300032180	Hardwood Forest Soil	GPKYGHTVVWKRVDDVPEFFLAYSGPRPVDREKWLGHLRPPTQLHPASVQMEADTAKFEKIFIDLMSH
Ga0307471_1020854762	3300032180	Hardwood Forest Soil	DCAFEHGPKYGHTVVWTPPADVPTFFLAYSGPAPRDREKWLSHMTPPAQLHPASVEMDVDVEKFQKVFVDIMSH
Ga0307472_1000208456	3300032205	Hardwood Forest Soil	HGPKYGHTVVWTPPADVPTFFLAYSGPAPRDREKWLSHMTPPAQLHPASVEMDVDVEKFQKVFVDIMSH
Ga0307472_1009038922	3300032205	Hardwood Forest Soil	THGPKYGHTVAWKPLDEIPAFFLAYSGPRPVDNEKWKGHLIPPAHLHPATVQMEVDVEKFERVFIDLMSH
Ga0335080_120652121	3300032828	Soil	YIIDPTVITKSEEMYVDVDIEHGPQYGIMLMWKPSAKLPDFLLPYSGPRAPDREKWAGHLKPPPQLHPASVQLQADVKKFEDIFVEAMSK
Ga0335081_116075431	3300032892	Soil	KSEEMYVDVDIEHGPQYGIMLMWKPSAKLPDFLLPYSGPRAPDREKWAGHLKPPPQLHPASVQLQADVKKFEDIFVEAMSK
Ga0335071_100168451	3300032897	Soil	MWDEVTVASLLDPSVIKKSETMYLDVDTSHGPKYGHTVVWKPSDEVFTWFLPYSGPRPPDKEKWRGHLTPPAHLHPASVQMEVDDEKFENIFVDLMSH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088759

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences