Metagenome / Metatranscriptome Family F088754

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088754
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	56 residues
Representative Sequence	SGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST
Number of Associated Samples	98
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.30 %
% of genes near scaffold ends (potentially truncated)	67.89 %
% of genes from short scaffolds (< 2000 bps)	80.73 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.991 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (28.440 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.633 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.33% β-sheet: 12.66% Coil/Unstructured: 81.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00171	Aldedh	8.26
PF05050	Methyltransf_21	7.34
PF01218	Coprogen_oxidas	6.42
PF01425	Amidase	4.59
PF00248	Aldo_ket_red	3.67
PF00149	Metallophos	2.75
PF13302	Acetyltransf_3	2.75
PF01834	XRCC1_N	2.75
PF07992	Pyr_redox_2	1.83
PF04366	Ysc84	0.92
PF02308	MgtC	0.92
PF01847	VHL	0.92
PF02574	S-methyl_trans	0.92
PF10282	Lactonase	0.92
PF02133	Transp_cyt_pur	0.92
PF00691	OmpA	0.92
PF13607	Succ_CoA_lig	0.92
PF07995	GSDH	0.92
PF09265	Cytokin-bind	0.92
PF04140	ICMT	0.92
PF00589	Phage_integrase	0.92
PF12651	RHH_3	0.92
PF03055	RPE65	0.92
PF09903	DUF2130	0.92
PF01979	Amidohydro_1	0.92
PF04199	Cyclase	0.92
PF05532	CsbD	0.92
PF00106	adh_short	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	8.26
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	8.26
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	8.26
COG0408	Coproporphyrinogen-III oxidase HemH, oxygen-dependent	Coenzyme transport and metabolism [H]	6.42
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	4.59
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.92
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.92
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.92
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.92
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.92
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.92
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.92
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.92
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.92
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.99 %
Unclassified	root	N/A	11.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.99 %
Unclassified	root	N/A	11.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.99 %
Unclassified	root	N/A	11.01 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.71 %
Unclassified	root	N/A	11.01 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	40.37 %
Unclassified	root	N/A	11.01 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.75 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	38.53 %
Unclassified	root	N/A	11.01 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	38.53 %
Unclassified	root	N/A	11.01 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-19	0.92 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	38.53 %
Unclassified	root	N/A	11.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.92 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-19	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	38.53 %
Unclassified	root	N/A	11.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.92 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-19	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	38.53 %
Unclassified	root	N/A	11.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	0.92 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-19	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	38.53 %
Unclassified	root	N/A	11.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	0.92 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.92 %
Betaproteobacteria bacterium HGW-Betaproteobacteria-19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-19	0.92 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002909\|JGI25388J43891_1029629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	901	Open in IMG/M
3300004092\|Ga0062389_103821141	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300004631\|Ga0058899_11280154	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005175\|Ga0066673_10257972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1010	Open in IMG/M
3300005175\|Ga0066673_10704240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005176\|Ga0066679_10518695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	776	Open in IMG/M
3300005181\|Ga0066678_10026596	All Organisms → cellular organisms → Bacteria	3099	Open in IMG/M
3300005181\|Ga0066678_10708104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	670	Open in IMG/M
3300005184\|Ga0066671_10316141	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005363\|Ga0008090_14851196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	755	Open in IMG/M
3300005552\|Ga0066701_10280908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1031	Open in IMG/M
3300005560\|Ga0066670_10080893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1772	Open in IMG/M
3300005560\|Ga0066670_10589387	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005561\|Ga0066699_11174044	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005566\|Ga0066693_10014999	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300005575\|Ga0066702_10064975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2001	Open in IMG/M
3300005575\|Ga0066702_10980103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	506	Open in IMG/M
3300005586\|Ga0066691_10200424	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005994\|Ga0066789_10342677	Not Available	625	Open in IMG/M
3300005994\|Ga0066789_10453042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	536	Open in IMG/M
3300005995\|Ga0066790_10004969	All Organisms → cellular organisms → Bacteria → Proteobacteria	5898	Open in IMG/M
3300006032\|Ga0066696_10623515	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006642\|Ga0075521_10236232	Not Available	872	Open in IMG/M
3300006796\|Ga0066665_10186818	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300006800\|Ga0066660_10249135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1388	Open in IMG/M
3300007076\|Ga0075435_101960680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300009012\|Ga0066710_101453497	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300009012\|Ga0066710_102895756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	673	Open in IMG/M
3300009643\|Ga0116110_1240926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	581	Open in IMG/M
3300010048\|Ga0126373_11774258	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010359\|Ga0126376_11532817	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012199\|Ga0137383_10189435	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300012923\|Ga0137359_10389183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1237	Open in IMG/M
3300012929\|Ga0137404_11423616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	640	Open in IMG/M
3300012971\|Ga0126369_11487519	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300014200\|Ga0181526_10034274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3273	Open in IMG/M
3300014493\|Ga0182016_10594707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	630	Open in IMG/M
3300014655\|Ga0181516_10009740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5394	Open in IMG/M
3300014658\|Ga0181519_10725823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	613	Open in IMG/M
3300015078\|Ga0167660_1014209	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300017924\|Ga0187820_1166923	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300017926\|Ga0187807_1222145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	615	Open in IMG/M
3300017972\|Ga0187781_11423477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	513	Open in IMG/M
3300018044\|Ga0187890_10397858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	773	Open in IMG/M
3300018482\|Ga0066669_10935326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	779	Open in IMG/M
3300018482\|Ga0066669_11653826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300019786\|Ga0182025_1364160	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300020582\|Ga0210395_10021041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4800	Open in IMG/M
3300021407\|Ga0210383_10151774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1969	Open in IMG/M
3300021478\|Ga0210402_10874683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	825	Open in IMG/M
3300021560\|Ga0126371_11061670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium HGW-Betaproteobacteria-19	950	Open in IMG/M
3300025650\|Ga0209385_1121245	Not Available	816	Open in IMG/M
3300025906\|Ga0207699_10618729	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300025911\|Ga0207654_10571507	Not Available	805	Open in IMG/M
3300025928\|Ga0207700_11051273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	728	Open in IMG/M
3300026277\|Ga0209350_1008552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3393	Open in IMG/M
3300026291\|Ga0209890_10116666	Not Available	913	Open in IMG/M
3300026294\|Ga0209839_10001683	All Organisms → cellular organisms → Bacteria → Proteobacteria	11179	Open in IMG/M
3300026295\|Ga0209234_1132526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	904	Open in IMG/M
3300026309\|Ga0209055_1009061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5374	Open in IMG/M
3300026310\|Ga0209239_1288291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	567	Open in IMG/M
3300026312\|Ga0209153_1002440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6035	Open in IMG/M
3300026316\|Ga0209155_1167280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300026323\|Ga0209472_1000322	All Organisms → cellular organisms → Bacteria	29092	Open in IMG/M
3300026333\|Ga0209158_1035336	Not Available	2131	Open in IMG/M
3300026333\|Ga0209158_1053797	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300026482\|Ga0257172_1031211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	961	Open in IMG/M
3300026482\|Ga0257172_1040096	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300026528\|Ga0209378_1121757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1117	Open in IMG/M
3300026550\|Ga0209474_10068983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2462	Open in IMG/M
3300026552\|Ga0209577_10118915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2118	Open in IMG/M
3300027565\|Ga0209219_1107491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	685	Open in IMG/M
3300027648\|Ga0209420_1071694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1010	Open in IMG/M
3300027853\|Ga0209274_10741729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	506	Open in IMG/M
3300027908\|Ga0209006_11058241	Not Available	642	Open in IMG/M
3300027915\|Ga0209069_10635275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	619	Open in IMG/M
3300028773\|Ga0302234_10178776	Not Available	920	Open in IMG/M
3300028795\|Ga0302227_10276110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	641	Open in IMG/M
3300029943\|Ga0311340_11549179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	517	Open in IMG/M
3300029993\|Ga0302304_10216650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	709	Open in IMG/M
3300029999\|Ga0311339_10347259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300030007\|Ga0311338_10611132	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300030520\|Ga0311372_11167864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	991	Open in IMG/M
3300030617\|Ga0311356_10511794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1171	Open in IMG/M
3300030737\|Ga0302310_10422053	Not Available	726	Open in IMG/M
3300030991\|Ga0073994_10017385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	559	Open in IMG/M
3300031027\|Ga0302308_10453818	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	761	Open in IMG/M
3300031234\|Ga0302325_10005670	All Organisms → cellular organisms → Bacteria → Proteobacteria	28303	Open in IMG/M
3300031234\|Ga0302325_11979397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	720	Open in IMG/M
3300031525\|Ga0302326_10330526	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300031573\|Ga0310915_11170756	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031753\|Ga0307477_10277438	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300031754\|Ga0307475_10869750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	713	Open in IMG/M
3300031771\|Ga0318546_10832037	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300031910\|Ga0306923_12561160	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031962\|Ga0307479_10211550	All Organisms → cellular organisms → Bacteria	1910	Open in IMG/M
3300032067\|Ga0318524_10332438	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300032205\|Ga0307472_100912302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	814	Open in IMG/M
3300032770\|Ga0335085_11497067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	703	Open in IMG/M
3300032783\|Ga0335079_11788228	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300032892\|Ga0335081_11540710	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300032955\|Ga0335076_10863863	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300032955\|Ga0335076_11731828	Not Available	514	Open in IMG/M
3300033402\|Ga0326728_10181222	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300033824\|Ga0334840_075843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	960	Open in IMG/M
3300033829\|Ga0334854_102019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	688	Open in IMG/M
3300033887\|Ga0334790_112500	Not Available	865	Open in IMG/M
3300034125\|Ga0370484_0001384	All Organisms → cellular organisms → Bacteria → Proteobacteria	4348	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.17%
Host-Associated	Host-Associated	1.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.91%
Aquatic	Environmental → Aquatic	8.26%
Plants	Host-Associated → Plants	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.31%
Peat	Environmental → Terrestrial → Peat	15.60%
Freshwater	Environmental → Aquatic → Freshwater	7.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Sediment	Environmental → Aquatic → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.29%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.84%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.75%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.10%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015078	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25388J43891_10296291	3300002909	Grasslands Soil	MGPSVAAPQTGTDSGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA*
Ga0062389_1038211412	3300004092	Bog Forest Soil	RAGQAPQSLSSLESGILVREDELISVKAQRLYKMRCECGRSWFELELPRFVECPACKKLGLVSA*
Ga0058899_112801541	3300004631	Forest Soil	PRFAHKAAAGIEVREQELGAIKAQSLYKMRCECGRSWFELELPKLMICPACAKLGLVSL*
Ga0066673_102579722	3300005175	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVS
Ga0066673_107042402	3300005175	Soil	RTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST*
Ga0066679_105186952	3300005176	Soil	MGPGVAAPQTETDSGMEVHEEELRTVTAQRLYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA*
Ga0066678_100265961	3300005181	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA*
Ga0066678_107081042	3300005181	Soil	HEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVSA*
Ga0066671_103161412	3300005184	Soil	MGPSVAVPQTETDSGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLALVSA*
Ga0008090_148511961	3300005363	Tropical Rainforest Soil	ADLNLPAPQSAPDSGIEVHEEEWGTVTVQRLYKVRCECGRSWFELELPKFVRCPACHRLGLVSQ*
Ga0066701_102809082	3300005552	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVSA*
Ga0066670_100808933	3300005560	Soil	MEVHEEELRTVTAQRLYKMRCECGRSWFELEVPKFVECPGCHKLGLVSA*
Ga0066670_105893872	3300005560	Soil	VTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLALVSA*
Ga0066699_111740441	3300005561	Soil	RTVSAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA*
Ga0066693_100149994	3300005566	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST*
Ga0066702_100649752	3300005575	Soil	MGPSVAAPQTETDSGMEVHEEELRTVSAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA*
Ga0066702_109801031	3300005575	Soil	VHEEELGAVTAQRMYKMHCECGRSWFELELPRVVKCPACRKLGFVSA*
Ga0066691_102004242	3300005586	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHR
Ga0066789_103426771	3300005994	Soil	EQELGAVKAQRLFKMRCECGRSWFELELPTLVECPACKKLCLVSA*
Ga0066789_104530421	3300005994	Soil	GIEVREEEMGSVRAQRVSKMRCDCGRSWFELELPTFVHCPACAKLCVVSM*
Ga0066790_100049695	3300005995	Soil	VVPPEPQPKGAIGAMESGIVVHEQELGAVKAQRLFKMRCECGRSWFELELPTLVECPACKKLCLVST*
Ga0066696_106235152	3300006032	Soil	MGPSVAAPQTAADSGMEVHEEELRTVSAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA*
Ga0075521_102362321	3300006642	Arctic Peat Soil	MESGIVVHEQELGAVKAQRLFKMRCECGRSWFELELPILVECPACKRLCLVSA*
Ga0066665_101868182	3300006796	Soil	MGPSVAVPQTEADSGMEVHEEELGTVTAQRLYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA*
Ga0066660_102491352	3300006800	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVEC
Ga0075435_1019606802	3300007076	Populus Rhizosphere	PQGATASGIEVHEEKWGTVTVQHVYKMRCECGRSWFELELPRFVKCPACHKLDYVST*
Ga0066710_1014534973	3300009012	Grasslands Soil	VAAPQTETDSGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST
Ga0066710_1028957561	3300009012	Grasslands Soil	VAAPQTETDSGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA
Ga0116110_12409261	3300009643	Peatland	MPKSPPPIAALESGIVVHEEELGSVKAQRLYKMRCECGRSWFELELPTLVECPACKKLCLVTA*
Ga0126373_117742581	3300010048	Tropical Forest Soil	EGQADLNLPAPQSAPENGIEVHEEEWGKVTVQRLYKVRCECGRSWFELELPKFVRCPACLKLGLVSQ*
Ga0126376_115328171	3300010359	Tropical Forest Soil	KNGGGIEVHEEELCEVQAQTPYKMRCECGRSWFELELPRLVKCPACEKLGLVNK*
Ga0137383_101894352	3300012199	Vadose Zone Soil	SGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST*
Ga0137359_103891831	3300012923	Vadose Zone Soil	QTATDSGIEVHEEELGTVTAQHVYKMRCECGRSWFELELLKFVECPACHKLSLVST*
Ga0137404_114236161	3300012929	Vadose Zone Soil	HAGRQIGPSVAPPQTATDSGIEVHEEELGTVTAQHVYKMRCECGRSWFELELLKFVECPACHKLSLVST*
Ga0126369_114875191	3300012971	Tropical Forest Soil	DLNLPGPQSPADSGIEVHEEEWGTVTVQPLYKMRCECGRSWFELELPKFVRCPACHRLGLVSQ*
Ga0181526_100342743	3300014200	Bog	VELKVAPPETATVSGIEVHEEKWGSVTAQRVYKMRCECGRSWFELELPKFVKCPACHKLGLISHLGCS*
Ga0182016_105947072	3300014493	Bog	VEESELGSVTAQQLFKMRCECGRSWFVLELPELIECPACRKMNLVSR*
Ga0181516_100097404	3300014655	Bog	MGQAAQPLSALDGGIVVSEEELGTVKAQRLYKMRCECGRSWFELELPTLVECPACKTLGLVSA*
Ga0181519_107258231	3300014658	Bog	PETATVSGIEVHEEKWGSVTAQRVYKMRCECGRSWFELELPKFVKCPACHKLGLISHLGCS*
Ga0167660_10142092	3300015078	Glacier Forefield Soil	MESGIVVREEELIAVKAQRLFKMRCECGRSWFELELPKFVECPACKKLGLVTA*
Ga0187820_11669232	3300017924	Freshwater Sediment	PAPQSAPESGIEVHEEEWGTVTVQSLYKVRCECGRSWFELELPTFVRCPACHKFGLVSQ
Ga0187807_12221451	3300017926	Freshwater Sediment	PLKTATDGGIEVHKERLGKVAVQRLYRMRCECGRSWIALVLPKYIKCPACHKLGQIFR
Ga0187781_114234771	3300017972	Tropical Peatland	EEELGSAIAQHLFRMRCECGRSWFELELPKLVKCPACSRLDLVHLTIQPA
Ga0187890_103978582	3300018044	Peatland	SSMDSGIVVREEELIAVKAQRLFKMRCECGRSWFELELPKFVECPACKKLGLVSA
Ga0066669_109353262	3300018482	Grasslands Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLG
Ga0066669_116538262	3300018482	Grasslands Soil	LRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST
Ga0173482_103281651	3300019361	Soil	REDELVQITAQRLYRLRCGCGRSWFELQLPHLVTCPACEKMGLVSP
Ga0182025_13641603	3300019786	Permafrost	VSALESDIVVREEELGTIKAQRLYKMRCECGRSWFELELPTLVECPACKKLGLVSA
Ga0210395_1002104110	3300020582	Soil	VGELNTANDTGIEVHEEEWGTVTAQVVYKMRCECGRSWFELDLLKFVECPACHKLGLISHPGQT
Ga0210383_101517741	3300021407	Soil	TVSGIEVHEEKWGTITAQHVYKMRCECGRSWFELELPKFVRCPACHKLGLVSHPGQS
Ga0210402_108746831	3300021478	Soil	APPEPETDCGMEVHEEEWGTVTVQHVYKVRCGCGRSWFELESPKLVQCPACHKFGFVSS
Ga0126371_110616701	3300021560	Tropical Forest Soil	DSGIEVTEEEWGTVTVQRLYKVRCECGRSWFELELPKFVRCPACHRVGLISQ
Ga0209385_11212451	3300025650	Arctic Peat Soil	MESGIVVHEQELGAVKAQRLFKMRCECGRSWFELELPILVECPACKRLCLVSA
Ga0207699_106187292	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	DSGIEVHEEEWGTVTVQALYKMRCECGRSWFELELPKFVKCPACHKLGLVSA
Ga0207654_105715071	3300025911	Corn Rhizosphere	LDVEPPETAAPSGIEVQEEQWGSIAVQRVYKMRCECGRSWFELELPQFIRCPACHRLALISE
Ga0207700_110512732	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	NGGPPRGATASGIEVHEEKWGTVTVQHVYKMRCECGRSWFELELPRFVKCPACHKLDYVS
Ga0209350_10085521	3300026277	Grasslands Soil	MGPSVAAPQTGTDSGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA
Ga0209890_101166662	3300026291	Soil	VVPPEPQPKGAIGAMESGIVVHEQELGAVKAQRLFKMRCECGRSWFELELPTLVECPACKNLCLVST
Ga0209839_1000168311	3300026294	Soil	VVPPEPQPKGAIGAMESGIIVHEQELGAVKAQRLFKMRCECGRSWFELELPTLVECPACKKLCLVST
Ga0209234_11325261	3300026295	Grasslands Soil	MGPSVAAPQTETDSGMEVHEEELRTVSAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA
Ga0209055_10090614	3300026309	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA
Ga0209239_12882911	3300026310	Grasslands Soil	EVHEEELGAVTAQRMYKMHCECGRSWFELELPRVVKCPACRKLGFVSA
Ga0209153_10024403	3300026312	Soil	MGPSVAVPQTETDSGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLALVSA
Ga0209155_11672801	3300026316	Soil	ARSTARDRGVAAPQTETDSGMEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST
Ga0209472_10003229	3300026323	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVST
Ga0209158_10353361	3300026333	Soil	ELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA
Ga0209158_10537972	3300026333	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVECPGCHKLGLVSA
Ga0257172_10312111	3300026482	Soil	ALPETATDSGIEVHEEEWGTVTVQRLYKMRCECGRSWFELKVPQFVKCPACNKLGLVSR
Ga0257172_10400961	3300026482	Soil	LPETATDSGIEVHEEEWGTVTVQHLYKMRCECGRSWFELEVPQFVKCPACNKLGLVSR
Ga0209378_11217572	3300026528	Soil	MGPSVAVPQTEADSGMEVHEEELGTVTAQRLYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA
Ga0209474_100689831	3300026550	Soil	MEVHEEELRTVTAQRMYKMRCECGRSWFELEVPKFVE
Ga0209577_101189153	3300026552	Soil	MGPGVAAPQTETDSGMEVHEEELRTVTAQRLYKMRCECGRSWFELEVPKFVECPGCHRLGLVSA
Ga0209219_11074911	3300027565	Forest Soil	RVDPHVASPEPATDSGMEVHEEEWGTVTAQHLYKMRCECGRSWFELELPKFVKCPGCNKFGLVSG
Ga0209420_10716942	3300027648	Forest Soil	PISSMESGILVREEELGSVKAQRLYKMRCDCGRSWFELELPRLVECPACKKLCLVSA
Ga0209274_107417291	3300027853	Soil	TATDSGIEVHEERLCKVTVQRLYKMRCECGRLWLAVLLPKFVKCPACHKLGIVFK
Ga0209006_110582412	3300027908	Forest Soil	SGIDVREEELGTVTAQQVYKMRCECGRSWFELDLPTTLIKCPACAKLSLISL
Ga0209069_106352751	3300027915	Watersheds	PQLPLVDPSVALPETATDSGIEVHEEEWGTVTVQHLYKMRCECGRSWFELELPQFVKCPACNKLGLVSW
Ga0302234_101787761	3300028773	Palsa	MVPSQQDTEAKLAAQPLGALESGIVVREEELGACKAQRMYKMRCECGRSWFELELPTLIECPACKKLCLVSA
Ga0302227_102761101	3300028795	Palsa	SNRRAPANASSMESGIVVREEELIAVKAQRLFKMRCECGRSWFELELPKFVECPACKKLGLVSA
Ga0311340_115491792	3300029943	Palsa	MESGIIVHEEELGSVKAQRMYKMRCDCGRSWFELELPTLVECPACKKLCLV
Ga0302304_102166502	3300029993	Palsa	SGIVVREEELIAVKAQRLFKMRCECGRSWFELELPKFVECPACKKLGLVSA
Ga0311339_103472593	3300029999	Palsa	IDVREEELGTVTAQQLYKMRCECGRSWFELDLPTTLIKCPACAKLCLICL
Ga0311338_106111321	3300030007	Palsa	AQPLGALESGIVVREEELGACKAQRMYKMRCECGRSWFELELPTLIECPACKKLCLVSA
Ga0311372_111678643	3300030520	Palsa	EEELIAVKAQRLFKMRCECGRSWFELELPKFVECPACKKLGLVSA
Ga0311356_105117943	3300030617	Palsa	EAKLAAQPLGALESGIVVREEELGACKAQRMYKMRCECGRSWFELELPTLIECPACKKLCLVSA
Ga0302310_104220532	3300030737	Palsa	MVPSQQDTEAKLAAQPLGALESGIVVREEELGACKAQRMYKMRCECGRSWFELELPTLIECPAC
Ga0073994_100173851	3300030991	Soil	GIEVHEEELGAVTAQRVYKMHCECGRSWFELELPRVVKCPACRKLGFVSV
Ga0302308_104538181	3300031027	Palsa	REEELGACKAQRMYKMRCECGRSWFELELPTLIECPACKKLCLVSA
Ga0302325_1000567022	3300031234	Palsa	MESGIIVHEEELGSVKAQRMYKMRCDCGRSWFELELPTLVECPACKKLCLVSA
Ga0302325_119793971	3300031234	Palsa	IEVQEEELCAVKAQVLFKMRCECGRSWFELELPRLVKCPACDKLGLVSS
Ga0302326_103305265	3300031525	Palsa	ALESGIVVREEELGACKAQRMYKMRCECGRSWFELELPTLIECPACKKLCLVSA
Ga0310915_111707561	3300031573	Soil	LNLPAAPNASDSGIEVHEEEWGTVTVQRLYKVRCQCGRSWFELDLPKFVRCPACHKLGLVSQ
Ga0307477_102774382	3300031753	Hardwood Forest Soil	MEVHEEDLGTVTALRIYKMRCECGRSWFELELPKFVECPGCHKLGFVSA
Ga0307475_108697501	3300031754	Hardwood Forest Soil	EVREEELGEVSAQRMYKMRCECGRSWFELELPQVVKCPACRKVGLVSASQGPRRRAPMPA
Ga0318546_108320371	3300031771	Soil	RGADLDLPAAQSPSDSGIEVHEEEWGTVTVQRLYKMRCECGRSWFELELPKFVRCPACHKLGLVSQ
Ga0306923_125611602	3300031910	Soil	DSGIEVHEEESGTVTVQRLYKVRCQCGRSWFELDLPKFVRCPACHKLGLVSQ
Ga0307479_102115504	3300031962	Hardwood Forest Soil	PTETATDSGIEVHEEEWGTVTVQHVYKMRCECGRSWFELEVPKVVKCPACNKFGFVSS
Ga0318524_103324382	3300032067	Soil	LNLPAAPNASDSGIEVHEEEWGTVTVQRLYKVRCECGRSWFELDLPKFVRCPACHKLGLVSQ
Ga0307472_1009123022	3300032205	Hardwood Forest Soil	LPQGATASGIEVHEEKWGTVTVQHVYKMRCECGRSWFELELPRFVKCPACHKLDYVST
Ga0335085_114970672	3300032770	Soil	TASGIEVHEEKWGTVTVQHVYKMRCECGRSWFELELLRFVKCPACHKLDYVCR
Ga0335079_117882282	3300032783	Soil	GGIEVQEEELSTITAQKLYKMRCECGRSWFELELSRLAKCPACSKIGVVDNGTG
Ga0335081_115407102	3300032892	Soil	QGGIEVHEEELSTITAQKLYQMRCECGRSWFELELSRLAKCPACSKIGVVDNGTG
Ga0335076_108638631	3300032955	Soil	EVHEEELSTITAQKLYQMRCECGRSWFELELSRLAKCPACSKIGVVDNGTG
Ga0335076_117318281	3300032955	Soil	ALESGIVVREEELGTVRAQRLYKMRCECGRSWFELELPKLVECPACKRLCLVSA
Ga0326728_101812223	3300033402	Peat Soil	ENGITVSEQELGSVKAQRLYKMRCDCGRSWFELELPRLVECPACRKLCLVSA
Ga0334840_075843_696_857	3300033824	Soil	MDSGIVVREEELIAVKAQRLFKMRCECGRSWFELELPKFVECPACKKLGLVSA
Ga0334854_102019_536_688	3300033829	Soil	GIEVHEGELGSVMAQRLYKMRCECGRSWFELELPRLVQCPACLRLNLVSV
Ga0334790_112500_278_481	3300033887	Soil	VVPPEPQPKGAIGAMESGIVVHEQELGAVKAQRLFKMRCECGRSWFELELPILVECPACKRLCLVSA
Ga0370484_0001384_1692_1895	3300034125	Untreated Peat Soil	VVPPEPQPKGAIGAMESGIVVHEQELGAVKAQRLFKMRCECGRSWFELELPTLVECPACKKLCLVSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088754

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences