Metagenome / Metatranscriptome Family F088750

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Overview

Basic Information
Family ID	F088750
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	38 residues
Representative Sequence	MFDDKTIVRMTIVYEDGSMTILKKEKDGRLSVERREK
Number of Associated Samples	74
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.07 %
% of genes near scaffold ends (potentially truncated)	8.26 %
% of genes from short scaffolds (< 2000 bps)	60.55 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.211 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (57.798 % of family members)
Environment Ontology (ENVO)	Unclassified (89.908 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 26.15% Coil/Unstructured: 73.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00118	Cpn60_TCP1	57.80
PF04679	DNA_ligase_A_C	4.59
PF04675	DNA_ligase_A_N	3.67
PF00899	ThiF	2.75
PF00004	AAA	1.83
PF02229	PC4	1.83
PF06067	DUF932	1.83
PF14520	HHH_5	0.92
PF01336	tRNA_anti-codon	0.92
PF03104	DNA_pol_B_exo1	0.92
PF12826	HHH_2	0.92
PF08271	TF_Zn_Ribbon	0.92
PF00136	DNA_pol_B	0.92
PF10055	DUF2292	0.92
PF12705	PDDEXK_1	0.92
PF13361	UvrD_C	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	57.80
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	8.26
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	1.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
All Organisms	root	All Organisms	46.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Viruses	superkingdom	All Organisms → Viruses	41.28 %
cellular organisms	root	All Organisms → cellular organisms	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.59 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	4.59 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	4.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.67 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	4.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.59 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.59 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.92 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.59 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	0.92 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.59 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	0.92 %
unclassified Marinobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter	0.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.70 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.59 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	0.92 %
Marinobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	0.92 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10000616	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	24022	Open in IMG/M
3300000115\|DelMOSum2011_c10139262	Not Available	735	Open in IMG/M
3300002488\|JGI25128J35275_1016902	All Organisms → Viruses → Predicted Viral	1841	Open in IMG/M
3300002488\|JGI25128J35275_1083735	Not Available	653	Open in IMG/M
3300005837\|Ga0078893_14388568	Not Available	794	Open in IMG/M
3300006726\|Ga0098070_103731	All Organisms → Viruses → Predicted Viral	1192	Open in IMG/M
3300006735\|Ga0098038_1010627	All Organisms → Viruses → Predicted Viral	3609	Open in IMG/M
3300006735\|Ga0098038_1092610	All Organisms → Viruses → Predicted Viral	1049	Open in IMG/M
3300006735\|Ga0098038_1142764	Not Available	802	Open in IMG/M
3300006737\|Ga0098037_1015404	All Organisms → Viruses → Predicted Viral	2905	Open in IMG/M
3300006737\|Ga0098037_1260703	Not Available	554	Open in IMG/M
3300006749\|Ga0098042_1000003	Not Available	93642	Open in IMG/M
3300006749\|Ga0098042_1007268	All Organisms → Viruses → Predicted Viral	3630	Open in IMG/M
3300006752\|Ga0098048_1026259	All Organisms → Viruses → Predicted Viral	1916	Open in IMG/M
3300006752\|Ga0098048_1050362	All Organisms → Viruses → Predicted Viral	1310	Open in IMG/M
3300006789\|Ga0098054_1043039	All Organisms → Viruses → Predicted Viral	1744	Open in IMG/M
3300006789\|Ga0098054_1216349	Not Available	696	Open in IMG/M
3300006793\|Ga0098055_1000910	Not Available	16648	Open in IMG/M
3300006802\|Ga0070749_10002298	Not Available	12839	Open in IMG/M
3300006920\|Ga0070748_1360193	Not Available	512	Open in IMG/M
3300006921\|Ga0098060_1010583	All Organisms → Viruses → Predicted Viral	3014	Open in IMG/M
3300006921\|Ga0098060_1010774	All Organisms → Viruses → Predicted Viral	2984	Open in IMG/M
3300006925\|Ga0098050_1001352	All Organisms → cellular organisms → Bacteria → Proteobacteria	8482	Open in IMG/M
3300006928\|Ga0098041_1000455	All Organisms → cellular organisms → Bacteria → Proteobacteria	16609	Open in IMG/M
3300006929\|Ga0098036_1031621	Not Available	1661	Open in IMG/M
3300006929\|Ga0098036_1091367	Not Available	937	Open in IMG/M
3300006929\|Ga0098036_1165561	Not Available	674	Open in IMG/M
3300007229\|Ga0075468_10100940	Not Available	915	Open in IMG/M
3300007345\|Ga0070752_1077096	All Organisms → Viruses → Predicted Viral	1464	Open in IMG/M
3300007539\|Ga0099849_1018686	All Organisms → Viruses → Predicted Viral	3025	Open in IMG/M
3300007555\|Ga0102817_1146506	Not Available	527	Open in IMG/M
3300007655\|Ga0102825_1136161	Not Available	509	Open in IMG/M
3300009132\|Ga0118730_1132236	All Organisms → Viruses → Predicted Viral	1580	Open in IMG/M
3300009420\|Ga0114994_10108420	All Organisms → Viruses → Predicted Viral	1889	Open in IMG/M
3300009425\|Ga0114997_10028250	All Organisms → Viruses → Predicted Viral	3757	Open in IMG/M
3300009425\|Ga0114997_10171389	Not Available	1267	Open in IMG/M
3300009433\|Ga0115545_1002011	Not Available	10100	Open in IMG/M
3300009433\|Ga0115545_1099662	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300009433\|Ga0115545_1180180	Not Available	726	Open in IMG/M
3300009608\|Ga0115100_10771029	Not Available	701	Open in IMG/M
3300009790\|Ga0115012_12045993	Not Available	509	Open in IMG/M
3300010148\|Ga0098043_1000092	All Organisms → cellular organisms → Bacteria	28482	Open in IMG/M
3300010148\|Ga0098043_1001091	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	9878	Open in IMG/M
3300010148\|Ga0098043_1054611	Not Available	1216	Open in IMG/M
3300010150\|Ga0098056_1034704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → unclassified Marinobacter → Marinobacter sp.	1769	Open in IMG/M
3300010153\|Ga0098059_1078473	All Organisms → Viruses → Predicted Viral	1318	Open in IMG/M
3300011252\|Ga0151674_1009121	Not Available	700	Open in IMG/M
3300012920\|Ga0160423_10177790	All Organisms → Viruses → Predicted Viral	1487	Open in IMG/M
3300012920\|Ga0160423_10751623	Not Available	657	Open in IMG/M
3300012928\|Ga0163110_10239152	All Organisms → Viruses → Predicted Viral	1304	Open in IMG/M
3300012928\|Ga0163110_11795851	Not Available	500	Open in IMG/M
3300017705\|Ga0181372_1049629	Not Available	709	Open in IMG/M
3300017706\|Ga0181377_1084405	Not Available	562	Open in IMG/M
3300017710\|Ga0181403_1015875	All Organisms → Viruses → Predicted Viral	1608	Open in IMG/M
3300017728\|Ga0181419_1099000	Not Available	719	Open in IMG/M
3300017732\|Ga0181415_1032909	All Organisms → Viruses → Predicted Viral	1192	Open in IMG/M
3300017741\|Ga0181421_1028799	All Organisms → Viruses → Predicted Viral	1504	Open in IMG/M
3300017749\|Ga0181392_1224706	Not Available	534	Open in IMG/M
3300017764\|Ga0181385_1061437	Not Available	1163	Open in IMG/M
3300017767\|Ga0181406_1026429	All Organisms → Viruses → Predicted Viral	1825	Open in IMG/M
3300018418\|Ga0181567_10291461	All Organisms → Viruses → Predicted Viral	1100	Open in IMG/M
3300020403\|Ga0211532_10004554	Not Available	9819	Open in IMG/M
3300020403\|Ga0211532_10035606	All Organisms → Viruses → Predicted Viral	2496	Open in IMG/M
3300020406\|Ga0211668_10098994	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300020414\|Ga0211523_10003916	Not Available	7350	Open in IMG/M
3300020417\|Ga0211528_10175890	Not Available	831	Open in IMG/M
3300020421\|Ga0211653_10182886	Not Available	921	Open in IMG/M
3300020436\|Ga0211708_10275941	Not Available	681	Open in IMG/M
3300020471\|Ga0211614_10096834	All Organisms → Viruses → Predicted Viral	1250	Open in IMG/M
3300021356\|Ga0213858_10261779	Not Available	831	Open in IMG/M
3300022200\|Ga0196901_1013026	All Organisms → Viruses → Predicted Viral	3476	Open in IMG/M
3300022925\|Ga0255773_10251594	Not Available	755	Open in IMG/M
3300025085\|Ga0208792_1014751	All Organisms → Viruses → Predicted Viral	1703	Open in IMG/M
3300025086\|Ga0208157_1082025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	803	Open in IMG/M
3300025098\|Ga0208434_1080020	Not Available	666	Open in IMG/M
3300025099\|Ga0208669_1001318	Not Available	9162	Open in IMG/M
3300025099\|Ga0208669_1025010	All Organisms → Viruses → Predicted Viral	1497	Open in IMG/M
3300025101\|Ga0208159_1000204	Not Available	24790	Open in IMG/M
3300025101\|Ga0208159_1001467	All Organisms → cellular organisms → Archaea	8809	Open in IMG/M
3300025110\|Ga0208158_1000160	Not Available	28790	Open in IMG/M
3300025112\|Ga0209349_1018883	Not Available	2471	Open in IMG/M
3300025127\|Ga0209348_1098041	Not Available	914	Open in IMG/M
3300025128\|Ga0208919_1010502	Not Available	3794	Open in IMG/M
3300025132\|Ga0209232_1000125	Not Available	46901	Open in IMG/M
3300025132\|Ga0209232_1000503	Not Available	23865	Open in IMG/M
3300025132\|Ga0209232_1000534	Not Available	23014	Open in IMG/M
3300025132\|Ga0209232_1002057	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	10274	Open in IMG/M
3300025132\|Ga0209232_1004889	Not Available	6039	Open in IMG/M
3300025132\|Ga0209232_1005111	Not Available	5866	Open in IMG/M
3300025132\|Ga0209232_1238474	Not Available	532	Open in IMG/M
3300025137\|Ga0209336_10052355	All Organisms → Viruses → Predicted Viral	1262	Open in IMG/M
3300025151\|Ga0209645_1000060	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	48755	Open in IMG/M
3300025151\|Ga0209645_1007784	All Organisms → Viruses → Predicted Viral	4462	Open in IMG/M
3300025151\|Ga0209645_1009653	All Organisms → Viruses → Predicted Viral	3933	Open in IMG/M
3300025151\|Ga0209645_1013893	All Organisms → Viruses → Predicted Viral	3172	Open in IMG/M
3300025151\|Ga0209645_1021252	All Organisms → Viruses → Predicted Viral	2469	Open in IMG/M
3300025151\|Ga0209645_1043821	Not Available	1596	Open in IMG/M
3300025151\|Ga0209645_1050403	All Organisms → Viruses → Predicted Viral	1461	Open in IMG/M
3300025151\|Ga0209645_1188625	Not Available	615	Open in IMG/M
3300025168\|Ga0209337_1004633	Not Available	9496	Open in IMG/M
3300025168\|Ga0209337_1221380	Not Available	750	Open in IMG/M
3300025632\|Ga0209194_1126699	Not Available	621	Open in IMG/M
3300027813\|Ga0209090_10042584	All Organisms → Viruses → Predicted Viral	2573	Open in IMG/M
3300029309\|Ga0183683_1000035	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	85884	Open in IMG/M
3300029319\|Ga0183748_1011545	All Organisms → Viruses → Predicted Viral	3615	Open in IMG/M
3300029448\|Ga0183755_1000396	Not Available	26666	Open in IMG/M
3300031519\|Ga0307488_10049134	All Organisms → Viruses → Predicted Viral	3278	Open in IMG/M
3300031851\|Ga0315320_10803965	Not Available	590	Open in IMG/M
3300032011\|Ga0315316_10491082	Not Available	1030	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	61.47%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.01%
Coastal	Environmental → Aquatic → Marine → Coastal	10.09%
Strait	Environmental → Aquatic → Marine → Strait	6.42%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.50%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.67%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	57.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.01%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.09%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.42%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.67%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.83%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.83%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	57.80%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	11.01%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.42%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.50%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	3.67%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.67%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.83%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.83%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.83%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.92%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.92%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300002488	Marine viral communities from the Pacific Ocean - ETNP_2_60	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006726	Marine viral communities from Cariaco Basin, Caribbean Sea - 28_WHOI_OMZ	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M
3300009132	Combined Assembly of Gp0139359, Gp0139510	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009608	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300011252	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeate	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020406	Marine microbial communities from Tara Oceans - TARA_B100000886 (ERX555926-ERR599024)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020417	Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_1000061613	3300000115	Marine	MFDDKTIERMTIVYTDGSMTILTKNKDGTMSVQRREK*
DelMOSum2011_101392623	3300000115	Marine	MFDGDIVRMTIVYADGSMSILVKEDDGRLRIERRKK*
JGI25128J35275_10169023	3300002488	Marine	LGDDMFDDKTIVRMTIVYEDGSITILKKNKDGTLSVERRET*
JGI25128J35275_10837352	3300002488	Marine	MRLSVDDKEIVRMTIVYADGSMTILVKEKNGTLSVERRGR*
Ga0078893_143885681	3300005837	Marine Surface Water	DDKEIVRMTIVYKDGSMTILKREKNGMLSVDRRQK*
Ga0098070_1037312	3300006726	Marine	MDDKEIVRMTIVYKDGSMTILTKNEDGTMKTERRQK*
Ga0098038_10106276	3300006735	Marine	MMFDDKEIVRMTIVYKDGSMTILTKNDDGTLSVDRREMR*
Ga0098038_10926103	3300006735	Marine	MFDDKEIVRMTIVYKDGSMTILTKNDDGTLSVDRREK*
Ga0098038_11427644	3300006735	Marine	KMFDDKDIVRITIVYADGSMTILKRKGDSLMSVERREKT*
Ga0098037_10154043	3300006737	Marine	MFDDKDIVRITIVYADGSMTILKRKGDSLMSVERREKT*
Ga0098037_12607032	3300006737	Marine	MDKQIVRMTIVYADGTMTILVKGDDGKLSVERRER*NAQSAKKKL
Ga0098042_100000363	3300006749	Marine	MNMFDDKTIVRMTIVYEDGSMTILTKNDDGTLAVQRREK*
Ga0098042_10072685	3300006749	Marine	MFDDKEIVRMTIVYQDGSMTILIREGNLFKIERRQGKNDRRL*
Ga0098048_10262598	3300006752	Marine	IEMLDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKS*
Ga0098048_10503622	3300006752	Marine	MLNDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRRQKSKRKQLQ
Ga0098054_10430392	3300006789	Marine	MDKQIVRMTIVYADGTMTILVKGDDGKLSVERRER*
Ga0098054_12163492	3300006789	Marine	MLDDKDIVRMTIVYKDGSMTILVKGKDGKLSVERRQKR*
Ga0098055_100091032	3300006793	Marine	MLNDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRRQKS*
Ga0070749_1000229826	3300006802	Aqueous	MFDDKTIVRMTIVYEDGSMTILKKEKDGRLSVERREK*
Ga0070748_13601931	3300006920	Aqueous	MLDKEIVRMTIVYEDGNMTILTKNKDGTMSVQRREK*
Ga0098060_10105836	3300006921	Marine	MLDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRRKSN*
Ga0098060_10107742	3300006921	Marine	MNMLDDKDIVRMTIVYKDGSMTILIKGKDGKLSVERRQKS*
Ga0098050_10013521	3300006925	Marine	IMDKQIVRMTIVYADGTMTILVKGDDGKLSVERR*
Ga0098041_100045522	3300006928	Marine	MFDDKDIVRMTIVYKDGSMTILIKQSDGTLKVERREK*
Ga0098036_10316212	3300006929	Marine	VHLGDNMFDDKTIVRMTIVYEDGSITILKKNKDGAMSVERREV*
Ga0098036_10913672	3300006929	Marine	MLDDKDIVRMTIVYKDGSMTILIKGKDGKLSVERRQKS*
Ga0098036_11655612	3300006929	Marine	MLDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKS*
Ga0075468_101009402	3300007229	Aqueous	MRMLDKEIVRMTIVYEDGNMTILTKNKDGTMSVQRREK*
Ga0070752_10770962	3300007345	Aqueous	MNMFDDKTIVRMTIVYEDGSMTILKKEKDGRLSVERREK*
Ga0099849_10186863	3300007539	Aqueous	MFDDKTIVRMTIVYEDGSMTILTKNKDGTMKVQRREK*
Ga0102817_11465062	3300007555	Estuarine	MKMNVDDKSIVRMTIVYADGSMTILVKEADGSLSVERR
Ga0102825_11361612	3300007655	Estuarine	MKMNVDDKSIVRMTIVYADGSMTILVKEADGSLSVERRER*
Ga0118730_11322362	3300009132	Marine	MFEDKNIVRMTIVYEDGSMTILTKNEDGSMTVKRREK*
Ga0114994_101084202	3300009420	Marine	MNMFDDKKIERMTIVYEDGSMTILIRQKNGNMTVDRRPA*
Ga0114997_100282505	3300009425	Marine	MFDDKTIVRMTIVYEDGSMTILKKTKQGMSVERKESK*
Ga0114997_101713894	3300009425	Marine	MVNLDDKDIERMTIVYTDGSMTILLKGKDGKLSIKRRPAI*
Ga0115545_10020112	3300009433	Pelagic Marine	MVNLNDKDIERMTIVYTDGSMTILRKGKDGKLSIDRRPAQ*
Ga0115545_10996623	3300009433	Pelagic Marine	MIDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKS*
Ga0115545_11801802	3300009433	Pelagic Marine	MNMLDKNIVRMTIVYEDGSMTILTKNKDGSMSVQRREK*
Ga0115100_107710292	3300009608	Marine	MIDDKDIVRMTIVYKDGSMTILKKEKNGMLSVDRREKP*
Ga0115012_120459932	3300009790	Marine	MFDDKEIVRMTIVYKDGSMTILTKNKDGTLNVDRREK*
Ga0098043_100009240	3300010148	Marine	MFDDKEIVRMTIVYQDGSMTILIREGNSFKIERRQGKNDRRL*
Ga0098043_100109111	3300010148	Marine	MFDDKKIVRMTIVYEDGSMTILTKNEDGSMAVQRREK*
Ga0098043_10546112	3300010148	Marine	MIDNKDIVRMTIVYADGSMTILIKNKDGTLKVERRQK*
Ga0098056_10347041	3300010150	Marine	MIDDKDIVRMTIVYKDGSMTILIKQSDGTLKVERRNK*
Ga0098059_10784732	3300010153	Marine	MNMLDDKEIVRMTIVYKDGSMTILKRKGDSLMSVERREKK*
Ga0151674_10091212	3300011252	Marine	MIDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRRQK*
Ga0160423_101777902	3300012920	Surface Seawater	MLDDKDIVRMTIVYADGSMTILVKNKDGTLKVERRQK*
Ga0160423_107516231	3300012920	Surface Seawater	MFDDKDIVRMTIVYADGSMTILVKNKDGTLKVERRQK*
Ga0163110_102391522	3300012928	Surface Seawater	MFDDKEIKSMTIVYTDGSTTILTKNKDGSMTVQRREK*
Ga0163110_117958512	3300012928	Surface Seawater	MLGDKDIVRMTIVYADGSMTILVKNKDGTLKVERRQK*
Ga0181372_10496292	3300017705	Marine	MFDDKDIVRITIVYADGSMTILKRKGDSLMSVERREKT
Ga0181377_10844052	3300017706	Marine	MIDNKDIVRMTIVYADGSMTILVKNKDGTLKVERRQKPXKRKQSQ
Ga0181403_10158753	3300017710	Seawater	MFDDKTIERMTIVYTDGSMTILTKNKDGTMSVQRREK
Ga0181419_10990003	3300017728	Seawater	VFDDKDIVRMTIVYKDGSMIILKKEMNGMLSVDSR
Ga0181415_10329092	3300017732	Seawater	MIDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKPXKRKQLQ
Ga0181421_10287992	3300017741	Seawater	VFDDKDIVRMNIVYKDGSMIILKKEKNGMLSVDRREKP
Ga0181392_12247062	3300017749	Seawater	MIDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKP
Ga0181385_10614373	3300017764	Seawater	MIDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRRKSN
Ga0181406_10264293	3300017767	Seawater	MIDDKDIVRMTIVYADGSMTILVRDGNVMRIERRQK
Ga0181567_102914612	3300018418	Salt Marsh	MFEDKTIVRMTIVYEDGCMTILKKEKDGRLSVERREK
Ga0211532_100045541	3300020403	Marine	MLDDKEIVRMTIVYKDGTMTILKKEKNGMLSVERREK
Ga0211532_100356066	3300020403	Marine	MNMFDDKEIVRMTIVYKDGSMTILTKNKDGTLNVDRREK
Ga0211668_100989942	3300020406	Marine	MFDDKEIVRMTIVYKDGSMTILTKNKDGTLSVNRRQG
Ga0211523_1000391613	3300020414	Marine	MFEDKTITRMTIVYEDGSLTILTKNKDGTMNVERREVK
Ga0211528_101758902	3300020417	Marine	MFDDKTIVRMTIVYEDGSMTILTKNTDGTMKVQRREK
Ga0211653_101828861	3300020421	Marine	MFDDKTIVRMTIVYEDGSITILKKNKDGAMSVERR
Ga0211708_102759411	3300020436	Marine	MIDNKDIVRMTIVYADGSMTILVKNKDGTLKVERRQK
Ga0211614_100968341	3300020471	Marine	MFDDKEIVRMTIVYKDGAMTILTKNDDGTLSVDRREMK
Ga0213858_102617792	3300021356	Seawater	MFDDKTIIRMTIVYEDGSMTILKKEKDGSLSVERREK
Ga0196901_10130268	3300022200	Aqueous	MFDDKTIVRMTIVYEDGSMTILKKEKDGRLSVERREK
Ga0255773_102515942	3300022925	Salt Marsh	MFDDKTIVRMTIVYEDGSMTILTKNKDGTMKVQRREK
Ga0208792_10147512	3300025085	Marine	MLNDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRRQKS
Ga0208157_10820251	3300025086	Marine	MFDDKEIVRMTIVYKDGSMTILTKNDDGTLSVDRREK
Ga0208434_10800202	3300025098	Marine	MLNDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRRQKSXKRKQLQ
Ga0208669_100131813	3300025099	Marine	MNMLDDKDIVRMTIVYKDGSMTILIKGKDGKLSVERRQKS
Ga0208669_10250104	3300025099	Marine	MLDDKDIVRMTIVYKDGSMTILIKGKDGKLSVERRQKS
Ga0208159_100020438	3300025101	Marine	MNMFDDKTIVRMTIVYEDGSMTILTKNDDGTLAVQRREK
Ga0208159_100146715	3300025101	Marine	MMFDDKEIVRMTIVYKDGSMTILTKNDDGTLSVDRREMR
Ga0208158_100016010	3300025110	Marine	MFDDKDIVRMTIVYKDGSMTILIKQSDGTLKVERREK
Ga0209349_10188838	3300025112	Marine	LKINDKDIERMTIVYVDGSMTILIKGKDGKLKVSRRPAQ
Ga0209348_10980412	3300025127	Marine	MFEDKDIVRMTIVYKDGSMTILVRDGNVMKIERRQR
Ga0208919_10105022	3300025128	Marine	MFDDKTIVRMTIVYEDGSITILKKNKDGAMSVERREV
Ga0209232_100012547	3300025132	Marine	MFDDKTIVRMTIVYEDGSITILKKNKDGTLSVERRET
Ga0209232_10005036	3300025132	Marine	MMFDDKTIVRMTIVYEDGSMTILTKNDDGTLAVQRREK
Ga0209232_100053442	3300025132	Marine	MLDDKDIVRMTIVYKDGSMIILKKEKDGSMSVDRRQKS
Ga0209232_100205716	3300025132	Marine	MFDDKKIARMTIVYEDGSMTILTKNEDGSMAVQRREK
Ga0209232_10048898	3300025132	Marine	MRLSVDDKEIVRMTIVYADGSMTILVKEKNGTLSVERRGR
Ga0209232_10051117	3300025132	Marine	MFDDKEIVRMTIVYKDGSMTILTKNKDGTLSVDRREKR
Ga0209232_12384742	3300025132	Marine	MFDDKTIVRMTIVYEDGSMTILTKNNDGTMKVQRREK
Ga0209336_100523552	3300025137	Marine	MFDDKTIVRMTIVYEDGSMTILKKEKDGTMSVDRRTDS
Ga0209645_100006038	3300025151	Marine	MFDDKTIVRMTIVYEDGSMTILKKEKDGSMSVDRREKS
Ga0209645_100778410	3300025151	Marine	MFDDKKITRMTIVYEDGSMTILTKNEDGSMAVQRREK
Ga0209645_10096533	3300025151	Marine	MFDDKTIERMTIVYEDGSMTILTKNKDGTMKVQRREK
Ga0209645_10138933	3300025151	Marine	MIDNKDIVRMTIVYADGSMTILIKEKDGTLKVERRQK
Ga0209645_10212529	3300025151	Marine	MLDDKDIVRMTIVYKDGSMTILVRDGNVMRIERRQK
Ga0209645_10438214	3300025151	Marine	MFDDKDIVRMTIVYADGSMTILVKNKDGTLKVERRQK
Ga0209645_10504032	3300025151	Marine	MFDDKEIVRMTIVYKDGTMTILKKEKNGMLSVERREK
Ga0209645_11886252	3300025151	Marine	MLDDKDIVRMTIVYADGSMTILIKEKDGTLKVERRQK
Ga0209337_100463313	3300025168	Marine	MFDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKS
Ga0209337_12213802	3300025168	Marine	MFDGDIVRMTIVYADGSMSILVKEDDGRLKVERRKK
Ga0209194_11266993	3300025632	Pelagic Marine	MIDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKS
Ga0209090_100425843	3300027813	Marine	MNMFDDKKIERMTIVYEDGSMTILIRQKNGNMTVDRRPA
Ga0183683_100003537	3300029309	Marine	MFDDKTIVRMTIVYEDGSMTILIKNDDGTLSVDRREMK
Ga0183748_10115454	3300029319	Marine	MFDDKEIVRMTIVYKDGSMTILTKNDDGTLSVDRRQK
Ga0183755_10003967	3300029448	Marine	VIDNKDIVRMTIVYADGSMTILVKGKDGKLSVERRQKR
Ga0307488_100491342	3300031519	Sackhole Brine	MFDDKKIKRMTIVYEDGSMTILIKQDDGRYTYERRPV
Ga0315320_108039652	3300031851	Seawater	VFDDKDIVRMTIVYKDGSMIILKKEKNGMLSVDRREKP
Ga0315316_104910822	3300032011	Seawater	VRIGGIKMLNDKDIVRMTIVYKDGSMTILTKNKDGTLSVDRRQKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088750

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences