Metagenome / Metatranscriptome Family F088693

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088693
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	59 residues
Representative Sequence	VREVVNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD
Number of Associated Samples	86
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.23 %
% of genes near scaffold ends (potentially truncated)	78.90 %
% of genes from short scaffolds (< 2000 bps)	90.83 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.881 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere (8.257 % of family members)
Environment Ontology (ENVO)	Unclassified (51.376 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (77.064 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.37% β-sheet: 0.00% Coil/Unstructured: 64.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00171	Aldedh	5.50
PF13489	Methyltransf_23	3.67
PF00872	Transposase_mut	2.75
PF13683	rve_3	2.75
PF01791	DeoC	2.75
PF13701	DDE_Tnp_1_4	1.83
PF00144	Beta-lactamase	1.83
PF01654	Cyt_bd_oxida_I	1.83
PF07366	SnoaL	1.83
PF03952	Enolase_N	0.92
PF07040	DUF1326	0.92
PF13193	AMP-binding_C	0.92
PF08240	ADH_N	0.92
PF13374	TPR_10	0.92
PF08241	Methyltransf_11	0.92
PF01610	DDE_Tnp_ISL3	0.92
PF03575	Peptidase_S51	0.92
PF12439	GDE_N	0.92
PF02371	Transposase_20	0.92
PF13302	Acetyltransf_3	0.92
PF11175	DUF2961	0.92
PF00805	Pentapeptide	0.92
PF01979	Amidohydro_1	0.92
PF02585	PIG-L	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	5.50
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	5.50
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	5.50
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.75
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	1.83
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.83
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.92
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.92
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.92
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.92
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.92
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.88 %
Unclassified	root	N/A	43.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.88 %
Unclassified	root	N/A	43.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.88 %
Unclassified	root	N/A	43.12 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.71 %
Unclassified	root	N/A	43.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.94 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.28 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	3.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	8.26 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	3.67 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	3.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.92 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	8.26 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3.67 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.67 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.92 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.92 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	4.59 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.67 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	1.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.92 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.92 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	0.92 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.92 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.12 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3.67 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %
Pseudonocardia ammonioxydans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans	0.92 %
Pseudonocardia broussonetiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia broussonetiae	0.92 %
Geodermatophilus poikilotrophus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus poikilotrophus	0.92 %
Actinomycetospora succinea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	0.92 %
Kribbella catacumbae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	0.92 %
Cellulomonas hominis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas hominis	0.92 %
Mycobacterium heckeshornense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	0.92 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119190839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia broussonetiae	652	Open in IMG/M
3300004157\|Ga0062590_100935817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	816	Open in IMG/M
3300005093\|Ga0062594_100700226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas hominis	914	Open in IMG/M
3300005164\|Ga0066815_10091977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella catacumbae	560	Open in IMG/M
3300005329\|Ga0070683_100550101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1104	Open in IMG/M
3300005329\|Ga0070683_100810631	Not Available	897	Open in IMG/M
3300005329\|Ga0070683_101079527	Not Available	771	Open in IMG/M
3300005329\|Ga0070683_101800391	Not Available	589	Open in IMG/M
3300005334\|Ga0068869_100192715	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300005337\|Ga0070682_100069946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2242	Open in IMG/M
3300005338\|Ga0068868_100031720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4062	Open in IMG/M
3300005338\|Ga0068868_100414164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1165	Open in IMG/M
3300005338\|Ga0068868_100776568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	863	Open in IMG/M
3300005339\|Ga0070660_101258306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300005344\|Ga0070661_101792837	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300005356\|Ga0070674_100542560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	974	Open in IMG/M
3300005365\|Ga0070688_101315748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300005435\|Ga0070714_100122827	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300005438\|Ga0070701_11112327	Not Available	557	Open in IMG/M
3300005439\|Ga0070711_102015207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300005455\|Ga0070663_102161977	Not Available	502	Open in IMG/M
3300005456\|Ga0070678_102374063	Not Available	503	Open in IMG/M
3300005547\|Ga0070693_101416335	Not Available	541	Open in IMG/M
3300005615\|Ga0070702_100758007	Not Available	746	Open in IMG/M
3300005616\|Ga0068852_102149424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	580	Open in IMG/M
3300005718\|Ga0068866_11194414	Not Available	549	Open in IMG/M
3300005834\|Ga0068851_10229483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1046	Open in IMG/M
3300005843\|Ga0068860_102556166	Not Available	530	Open in IMG/M
3300006028\|Ga0070717_10444194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans	1168	Open in IMG/M
3300006755\|Ga0079222_10637988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300006846\|Ga0075430_100076990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2796	Open in IMG/M
3300006854\|Ga0075425_100821454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1065	Open in IMG/M
3300006881\|Ga0068865_101117339	All Organisms → cellular organisms → Bacteria → Terrabacteria group	695	Open in IMG/M
3300009094\|Ga0111539_11028660	Not Available	958	Open in IMG/M
3300009094\|Ga0111539_13503008	Not Available	504	Open in IMG/M
3300009098\|Ga0105245_11003503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	879	Open in IMG/M
3300009098\|Ga0105245_12429893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	577	Open in IMG/M
3300009148\|Ga0105243_10627762	Not Available	1038	Open in IMG/M
3300009148\|Ga0105243_10903792	All Organisms → cellular organisms → Bacteria → Terrabacteria group	878	Open in IMG/M
3300009156\|Ga0111538_10480540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1575	Open in IMG/M
3300009174\|Ga0105241_12046952	Not Available	565	Open in IMG/M
3300009174\|Ga0105241_12376709	Not Available	529	Open in IMG/M
3300009177\|Ga0105248_12364420	Not Available	605	Open in IMG/M
3300009553\|Ga0105249_12893598	Not Available	551	Open in IMG/M
3300009553\|Ga0105249_13100903	Not Available	534	Open in IMG/M
3300010371\|Ga0134125_11527340	Not Available	727	Open in IMG/M
3300010373\|Ga0134128_11159082	Not Available	853	Open in IMG/M
3300010373\|Ga0134128_11628936	Not Available	710	Open in IMG/M
3300010375\|Ga0105239_11163962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	888	Open in IMG/M
3300010396\|Ga0134126_10906919	Not Available	991	Open in IMG/M
3300010401\|Ga0134121_11536608	Not Available	682	Open in IMG/M
3300010403\|Ga0134123_10860795	Not Available	907	Open in IMG/M
3300011119\|Ga0105246_11354043	Not Available	662	Open in IMG/M
3300012469\|Ga0150984_120468044	Not Available	678	Open in IMG/M
3300012898\|Ga0157293_10133747	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300012939\|Ga0162650_100052318	Not Available	671	Open in IMG/M
3300012951\|Ga0164300_10028387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2026	Open in IMG/M
3300012989\|Ga0164305_10191635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1429	Open in IMG/M
3300013296\|Ga0157374_11414159	Not Available	718	Open in IMG/M
3300013296\|Ga0157374_12257912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	571	Open in IMG/M
3300013307\|Ga0157372_12720343	All Organisms → cellular organisms → Bacteria → Terrabacteria group	568	Open in IMG/M
3300013308\|Ga0157375_10206329	Not Available	2121	Open in IMG/M
3300013308\|Ga0157375_10388847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1562	Open in IMG/M
3300013308\|Ga0157375_10437837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300014325\|Ga0163163_10720088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1061	Open in IMG/M
3300014325\|Ga0163163_11782078	Not Available	676	Open in IMG/M
3300014969\|Ga0157376_11499139	Not Available	707	Open in IMG/M
3300015077\|Ga0173483_10483653	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300015372\|Ga0132256_102512693	Not Available	616	Open in IMG/M
3300015372\|Ga0132256_102926165	Not Available	574	Open in IMG/M
3300017792\|Ga0163161_10074350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2492	Open in IMG/M
3300018465\|Ga0190269_11410071	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300018481\|Ga0190271_12348131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300019361\|Ga0173482_10656362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium heckeshornense	536	Open in IMG/M
3300020082\|Ga0206353_11408611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300021403\|Ga0210397_10136500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300025901\|Ga0207688_10041666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2555	Open in IMG/M
3300025901\|Ga0207688_10186487	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1239	Open in IMG/M
3300025901\|Ga0207688_10251400	Not Available	1071	Open in IMG/M
3300025901\|Ga0207688_10456303	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300025909\|Ga0207705_11333136	Not Available	547	Open in IMG/M
3300025911\|Ga0207654_11137447	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300025917\|Ga0207660_10239486	Not Available	1429	Open in IMG/M
3300025919\|Ga0207657_10544483	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300025919\|Ga0207657_11315988	Not Available	545	Open in IMG/M
3300025927\|Ga0207687_10248974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1412	Open in IMG/M
3300025927\|Ga0207687_11619693	All Organisms → cellular organisms → Bacteria → Terrabacteria group	555	Open in IMG/M
3300025927\|Ga0207687_11841072	Not Available	518	Open in IMG/M
3300025928\|Ga0207700_10328079	Not Available	1328	Open in IMG/M
3300025929\|Ga0207664_11461756	Not Available	605	Open in IMG/M
3300025931\|Ga0207644_10609873	Not Available	907	Open in IMG/M
3300025932\|Ga0207690_11433326	Not Available	577	Open in IMG/M
3300025937\|Ga0207669_11781674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	526	Open in IMG/M
3300025938\|Ga0207704_11921015	Not Available	509	Open in IMG/M
3300025942\|Ga0207689_10504480	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300025944\|Ga0207661_10739336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	905	Open in IMG/M
3300025981\|Ga0207640_10491082	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300025986\|Ga0207658_10443784	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300026023\|Ga0207677_11314148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300026142\|Ga0207698_12058779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	585	Open in IMG/M
3300027809\|Ga0209574_10353897	Not Available	514	Open in IMG/M
3300028007\|Ga0247718_1085978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus poikilotrophus	780	Open in IMG/M
3300028592\|Ga0247822_10128179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1852	Open in IMG/M
3300028597\|Ga0247820_10180219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1336	Open in IMG/M
3300028713\|Ga0307303_10085616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	708	Open in IMG/M
3300028812\|Ga0247825_10742691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	707	Open in IMG/M
3300030336\|Ga0247826_10780175	Not Available	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.55%
Environmental	Environmental	39.45%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.55%
Terrestrial	Environmental → Terrestrial	39.45%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.45%
Soil	Environmental → Terrestrial → Soil	38.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.35%
Roots	Host-Associated → Plants → Roots	1.83%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.92%
Phylloplane	Host-Associated → Plants → Phylloplane	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.43%
Loam	Environmental → Terrestrial → Soil → Loam	15.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.92%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.75%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.34%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.92%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028007	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-1-E_D	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1191908392	3300002568	Soil	VVNDNLPAGWTLEENQFIGPTPIPEDALDVIRGIVDEIDFWGMAQYYDNGD*
Ga0062590_1009358171	3300004157	Soil	VVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0062594_1007002261	3300005093	Soil	EVVNDNLPAGWTLEENQFVGPPPIPSDALDLIRGTIDAIDFWGMAQYYDNGD*
Ga0066815_100919771	3300005164	Soil	AAEGADFDQEGLCAEVREVVNDNLPAGWTLEENQFVGPTPLPGDAPEIIRDTIDEIDFWGMAQYYDNGD*
Ga0070683_1005501011	3300005329	Corn Rhizosphere	NDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIEEIDFWGMAQYYDNGD*
Ga0070683_1008106313	3300005329	Corn Rhizosphere	GLCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0070683_1010795271	3300005329	Corn Rhizosphere	NLPTGWTLDENQFIGPTPIPEDALNLIRNTVDEIDFWALAQYYDNGD*
Ga0070683_1018003911	3300005329	Corn Rhizosphere	CAEVREVVNDNLPAGWTLEENQFVGPPPIPSDALDLIRGTIDAIDFWGMAQYYDNGD*
Ga0068869_1001927152	3300005334	Miscanthus Rhizosphere	VVNDNLPAGWTLEENQFVGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD*
Ga0070682_1000699462	3300005337	Corn Rhizosphere	VVNDNLPAGWTLEENQFVGPPPIPSDALDLIRGTIDAIDFWGMAQYYDNGD*
Ga0068868_1000317205	3300005338	Miscanthus Rhizosphere	VVNDNLPTGWTLDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD*
Ga0068868_1004141641	3300005338	Miscanthus Rhizosphere	VVNDNLPAGWTLDENQFVGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD*
Ga0068868_1007765681	3300005338	Miscanthus Rhizosphere	FDQEGLCAEVREVVNDNLPAGWTLEENHFVGPTPIPEYALAIIRDTIDEIDFWGMAQYYDNGD*
Ga0070660_1012583062	3300005339	Corn Rhizosphere	AEGADFDQEGLSAEVREVVNDNLPPGWTLDDNQFVGPTPLPSDALDIIRNTIDEIDFWGMAQYYDNGD*
Ga0070661_1017928372	3300005344	Corn Rhizosphere	LSSRWGAAEGADFDQEGLCAEVREVINDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIDEIDFWGMAQYYDNGD*
Ga0070674_1005425601	3300005356	Miscanthus Rhizosphere	WTLDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD*
Ga0070688_1013157482	3300005365	Switchgrass Rhizosphere	VREVVNDNLPPGWTLDDNQFVGPTPLPSDALDIIRNTIDEIDFWGMAQYYDNGD*
Ga0070714_1001228272	3300005435	Agricultural Soil	EVREAVNDNLPAGWTLEENQFVGPAPIPEDALNVVRSTVDEIDFWGLAQYYDNGD*
Ga0070701_111123271	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	ADFDQEGLCAEVREVVNDNLPGGWTLEENQFVSGIPFPGDALNMIRNLIDEIDFWGMAQYYDNGD*
Ga0070711_1020152071	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VVNDNLPTGWTLDENQFVGPTPLPQDTLNIIRNAVDEIDFWGLAQYYDNGD*
Ga0070663_1021619771	3300005455	Corn Rhizosphere	AEVREVVNDNLPPGWTLDDNQFVGPTPLPSDALDIIRNTIDEIDFWGMAQYYDNGD*
Ga0070678_1023740631	3300005456	Miscanthus Rhizosphere	NLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0070693_1014163352	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	AEGADFDQEGLCAEVRQVVNDNLPAGWTLDENQFAGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD*
Ga0070702_1007580071	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GGADFDQDGLCAEVREVVNDNLPPAWTLDENQFVGPTPVPEDALSIVRDTVDEIDFWGLAQYYDNGD*
Ga0068852_1021494242	3300005616	Corn Rhizosphere	VNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD*
Ga0068866_111944141	3300005718	Miscanthus Rhizosphere	VDARLSSRWGAAEGADFDQEGLCAEVREVVNENLPGGWTLEENQIVSGIPFPGDALNMIRNLIDEIDFW
Ga0068851_102294832	3300005834	Corn Rhizosphere	NDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD*
Ga0068860_1025561662	3300005843	Switchgrass Rhizosphere	AEVREVVNDNLPQGWTLDDNQFVGPTPIPPDALDIIRNTIDEIDFWGMAQYYDNGD*
Ga0070717_104441941	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EVREAVNDNLPAGWTLDENQFVGPAPIPEDALNVVRSTVDEIDFWGLAQYYDNGD*
Ga0079222_106379882	3300006755	Agricultural Soil	AEVREVVNDNLPTGWSLDENQFVGPTPLPEGSLAIIRQAVDELDFWGMAQYYDNGD*
Ga0075430_1000769902	3300006846	Populus Rhizosphere	VVNDNLPAGWTLEEDHFVGPTPIPEDALEIVRATIDAIDFWGMAQYYDNGD*
Ga0075425_1008214542	3300006854	Populus Rhizosphere	VVNDNLPAGWTLDENQFAGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD*
Ga0068865_1011173393	3300006881	Miscanthus Rhizosphere	GARLSSRWGAAEGADFDQEGLCAEVREVVNENLPGGWTLEENQFVSGIPFPGDALNMIRNLIDEIDFWGMAQYYDNGD*
Ga0111539_110286601	3300009094	Populus Rhizosphere	DFDQEGLCAEVREVINDNLPAGWALEDNQFVGPTPLPEDALTIVQNIIDQIDFWGMAQYYDNGD*
Ga0111539_135030081	3300009094	Populus Rhizosphere	DWTLDENQFVGPTPLPEDALTIIRNAIGEIDFWTLAQYYDNGD*
Ga0105245_110035032	3300009098	Miscanthus Rhizosphere	EVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0105245_124298933	3300009098	Miscanthus Rhizosphere	FDQEGLCAEVRQVVNDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIDEIDFWGMAQYYDNGD*
Ga0105243_106277621	3300009148	Miscanthus Rhizosphere	VREVVNGNLPTGWTLDENQFIGPTPIPEDALNLIRNTVDEIDFWALAQYYDNGD*
Ga0105243_109037922	3300009148	Miscanthus Rhizosphere	LCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0111538_104805401	3300009156	Populus Rhizosphere	AEGADFDQEGLCAEVREVINDNLPAGWALEDNQFVGPTPLPEDALTIVQNIIDQIDFWGMAQYYDNGD*
Ga0105241_120469521	3300009174	Corn Rhizosphere	ADFDQEGLCAEVREVVNDNLPAGWTLDENHFVGPTPIAEDALAIIRDIIDEIDFWGMAQYYDNGD*
Ga0105241_123767092	3300009174	Corn Rhizosphere	ADFDQDGLCAEVREVVNDNLPPAWTLEENQFVGPTPVPEDALSPIRDTVDELDFWGLAQYYDNGD*
Ga0105248_123644201	3300009177	Switchgrass Rhizosphere	EVRDVVNDNLPTGWTLDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD*
Ga0105249_105942531	3300009553	Switchgrass Rhizosphere	LDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD*
Ga0105249_128935981	3300009553	Switchgrass Rhizosphere	DQEGLSAEVREVVNDNLPQGWTLDDNQFVGPTPIPPDALDIIRNTIDEIDFWGMAQYYDNGD*
Ga0105249_131009031	3300009553	Switchgrass Rhizosphere	EVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGLAQYYDNGD*
Ga0134125_115273401	3300010371	Terrestrial Soil	ARLSSRWGAAEGADFDQDGLCAEVREVVNVNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0134128_111590822	3300010373	Terrestrial Soil	FDQEGLCAEVRQVVNDNLPAGWTLDENQFAGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD*
Ga0134128_116289361	3300010373	Terrestrial Soil	PAGWTLEENQFVGPPPIPSDALDLIRGTIDAIDFWGMAQYYDNGD*
Ga0105239_111639621	3300010375	Corn Rhizosphere	RWGAAEGADFDQEGLCAEVREVVNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD*
Ga0134126_109069191	3300010396	Terrestrial Soil	FDQEGLCAEVRQVVNDNLPAGWTLDENHFVGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD*
Ga0134121_115366081	3300010401	Terrestrial Soil	VINDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIEEIDFWGMAQYYDNGD*
Ga0134123_108607951	3300010403	Terrestrial Soil	EVVNDNLPAGWTLEENQFLGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0105246_113540431	3300011119	Miscanthus Rhizosphere	VREVVNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD*
Ga0150984_1204680441	3300012469	Avena Fatua Rhizosphere	VREVINDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIEEIDFWGMAQYYDNGD*
Ga0157293_101337471	3300012898	Soil	LCAEVRQVVNDNLPDGWTLEQNQFVGPTPITEEALAVIRDIIDEIDFWGMTQYYDNGD*
Ga0162650_1000523181	3300012939	Soil	GADFDQEGLCAEVREVINDSLPAGWILEENQFGGPTPIPEDALNIVRNTIDEIDFWGMAQYYDNGD*
Ga0164300_100283871	3300012951	Soil	QLSSRWGAAGGADYDQDGLCAEVREVVNDNLPTGWTLDENQFVGPTPISEDALTIIRNTVDEIDFWTLAQYYDNGD*
Ga0164305_101916353	3300012989	Soil	VREVVNDNLPTGWTLDENQFVGPTPISEDALTIIRNTVDEIDFWTLAQYYDNGD*
Ga0157374_114141592	3300013296	Miscanthus Rhizosphere	VREVVNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMA
Ga0157374_122579122	3300013296	Miscanthus Rhizosphere	LPAGWTLEENQFVGPTPIPEDALNIVRNTIEEIDFWGMAQYYDNGD*
Ga0157372_127203431	3300013307	Corn Rhizosphere	EVVNDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIDEIDFWGMAQYYDNGD*
Ga0157375_102063291	3300013308	Miscanthus Rhizosphere	VGARLSSRWGAAEGADFDQEGLCAEVREVVNDNLPTGWTLDENQFDGPTPLAEDALNIIRNTVDGIDFWG
Ga0157375_103888472	3300013308	Miscanthus Rhizosphere	AAEGADFDQEGLCAEVREVVNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD*
Ga0157375_104378371	3300013308	Miscanthus Rhizosphere	VRQVVNDNLPAGWTLDENQFAGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD*
Ga0163163_107200881	3300014325	Switchgrass Rhizosphere	QEGLCAEVREVVNENLPGGWTLEENQFVSGIPFPGDALNMIRNLIDEIDFWGMAQYYDNGD*
Ga0163163_117820782	3300014325	Switchgrass Rhizosphere	REVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0157376_114991392	3300014969	Miscanthus Rhizosphere	DFDQEGLCAEVREVVNDNLPAGWTLEENKFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0173483_104836531	3300015077	Soil	DQEGLCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0132256_1025126932	3300015372	Arabidopsis Rhizosphere	CAEVREVVNDNLSAGWTLEENQFVGPTPIPEGALTMIRDTIDGIDFWGMAQYYDNGD*
Ga0132256_1029261651	3300015372	Arabidopsis Rhizosphere	VREVVNDNLPAGWILDENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD*
Ga0163161_100743502	3300017792	Switchgrass Rhizosphere	VVNDNLPAGWTLDENQFAGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD
Ga0190269_114100712	3300018465	Soil	RWGAAGAADFDQDGLCAEVRDVVNDNLPTGWTLDENQFVGPTPLPENALNIIRSTVDGIDFWGLAQYYDNGD
Ga0190271_123481311	3300018481	Soil	RWAAAEGADFDQEGLCAEVREVINDSLPAGWILEENQFVGPTPIPEDVLNIVRNTIEEIDFWGMAQYYDNGD
Ga0173482_106563622	3300019361	Soil	SSRWGAAEGADFDQEGLCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0206353_114086112	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VVNDNLPTGWTLDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQ
Ga0210397_101365001	3300021403	Soil	VEARLTSRWGAAEGADFDQEGLCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIVDEIDFWGMAQYY
Ga0207688_100416662	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VGARLSSRWGAAEGADFDQEGLCAEVREVVNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD
Ga0207688_101864871	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VDARLSSRWGAAEGADFDQEGLCAEVREVVNENLPGGWTLEENQFVSGIPFPGDALNMIRNLIDEIDFWGMAQYYDNGD
Ga0207688_102514002	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	EVREVINDNLPAGWALEDNQFVGPTPLPEDALTIVQNIIDQIDFWGMAQYYDNGD
Ga0207688_104563032	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	GLCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0207680_101544222	3300025903	Switchgrass Rhizosphere	ENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD
Ga0207705_113331362	3300025909	Corn Rhizosphere	AEGADFDQEGLCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0207654_111374471	3300025911	Corn Rhizosphere	TEVREVINDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIEEIDFWGMAQYYDNGD
Ga0207660_102394862	3300025917	Corn Rhizosphere	AEGADFDQDGLCAEVREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0207657_105444831	3300025919	Corn Rhizosphere	PAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0207657_113159881	3300025919	Corn Rhizosphere	DARLSSRWGTAEGADFDQEGLSAEVREVVNDNLPPGWTLDDNQFVGPTPLPSDALDIIRNTIDEIDFWGMAQYYDNGD
Ga0207687_102489743	3300025927	Miscanthus Rhizosphere	EVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0207687_116196931	3300025927	Miscanthus Rhizosphere	EGLCAEVREVINDNLPAGWTLEENQFVGPTPIPEDALNIVRNTIDEIDFWGMAQYYDNGD
Ga0207687_118410721	3300025927	Miscanthus Rhizosphere	NDNLPGGWTLEENQFVSGIPFPGDALNMIRNLIDEIDFWGMAQYYDNGD
Ga0207700_103280791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VVNDNLPIGWTLDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD
Ga0207664_114617561	3300025929	Agricultural Soil	AGGADFDQDGLCAEVREAVNDNLPAGWTLDENQFVGPAPIPEDALNVVRSTVDEIDFWGLAQYYDNGD
Ga0207644_106098732	3300025931	Switchgrass Rhizosphere	GAAEGADFDQEGLCAEVRQVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0207690_114333262	3300025932	Corn Rhizosphere	VREVVNDNLPAGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0207669_117816741	3300025937	Miscanthus Rhizosphere	AQLSARWGAAGAADFDQDGLCAEVREVVNDNLPTGWTLDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD
Ga0207704_119210151	3300025938	Miscanthus Rhizosphere	LSSRWGAAEGADFDQEGLCAEVRQVVNDNLPAGWTLDENQFAGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD
Ga0207689_105044801	3300025942	Miscanthus Rhizosphere	VGARLSSRWGAAEGADFDQEGLCAEVRQVVNDNLPAGWTLEENQFVGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD
Ga0207661_107393361	3300025944	Corn Rhizosphere	NLPTGWTLDENQFVGPTPLPEDALNIIRNTVDGIDFWGLAQYYDNGD
Ga0207640_104910823	3300025981	Corn Rhizosphere	VGARLSSRWGAAEGADFDQEGLCAEVRQVVNDNLPAGWTLDENQFAGPTPIAEDALASIRDIIDEIDFWGMAQYYDNGD
Ga0207658_104437842	3300025986	Switchgrass Rhizosphere	VDARLSSRWGTAEGADFDQEGLSAEVREVVNDNLPPGWTLDDNQFVGPTPLPSDALDIIRNTIDEIDFW
Ga0207677_113141482	3300026023	Miscanthus Rhizosphere	SSRWGTAEGADFDQEGLSAEVREVVNDNLPPGWTLDDNQFVGPTPLPSDALDIIRNTIDEIDFWGMAQYYDNGD
Ga0207698_120587792	3300026142	Corn Rhizosphere	VNDNLPAGWTLEENHFVGPTPIPEDALAIIRDTIDEIDFWGMAQYYDNGD
Ga0209574_103538971	3300027809	Agave	MRWVRDVVNDNLPTGWTLGENQFVGPAPLPEDALTIIRNAIGEIDFWTLAQYYHNGN
Ga0247718_10859782	3300028007	Soil	DNLPAGWALDENQFVGPTPVPEDALDIIRATIDEIDFWGIAQFYDNGD
Ga0247822_101281791	3300028592	Soil	EVREVVNDNLPTGWTLEENQFVGPTPIPEDTPGIIRDIIDEIDFWGMAQYYDNGD
Ga0247820_101802192	3300028597	Soil	VVNDNLPAGWTLEENQFVGPTPIPEDALAIIRDIVDEIDFWGMAQYYDNGD
Ga0307303_100856162	3300028713	Soil	VVNDNLPTGWTLDENQFVGPTPLPEDALNIIRNTVDGIDFWALAQYYDNGD
Ga0247825_107426912	3300028812	Soil	GLCAEVRQVVNDNLPAGWTLEENQFVGPTPIPEDALAIIRDIVDEIDFWGMAQYYDNGD
Ga0247826_107801751	3300030336	Soil	VVNDNLPAGWTLEENQFVGPTPIPEDALAIIRDIVDEIDFWGMAQYYD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088693

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences