Metagenome / Metatranscriptome Family F088658

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088658
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	108 residues
Representative Sequence	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDG
Number of Associated Samples	93
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.50 %
% of genes near scaffold ends (potentially truncated)	26.61 %
% of genes from short scaffolds (< 2000 bps)	75.23 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (30.275 % of family members)
Environment Ontology (ENVO)	Unclassified (58.716 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.95% β-sheet: 46.67% Coil/Unstructured: 52.38%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00076	RRM_1	25.69
PF01988	VIT1	6.42
PF07813	LTXXQ	1.83
PF01434	Peptidase_M41	0.92
PF13191	AAA_16	0.92
PF00487	FA_desaturase	0.92
PF00535	Glycos_transf_2	0.92
PF00270	DEAD	0.92
PF00011	HSP20	0.92
PF03006	HlyIII	0.92
PF12704	MacB_PCD	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	7.34
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	6.42
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	6.42
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.92
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.92
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.25 %
Viruses	superkingdom	All Organisms → Viruses	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	88.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	86.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	86.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	86.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	86.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10020343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2585	Open in IMG/M
3300002562\|JGI25382J37095_10019423	All Organisms → Viruses → Predicted Viral	2627	Open in IMG/M
3300005166\|Ga0066674_10020530	All Organisms → cellular organisms → Bacteria	2849	Open in IMG/M
3300005166\|Ga0066674_10039812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2098	Open in IMG/M
3300005179\|Ga0066684_10193713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300005445\|Ga0070708_100075818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3036	Open in IMG/M
3300005445\|Ga0070708_100982184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	792	Open in IMG/M
3300005447\|Ga0066689_10547427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	731	Open in IMG/M
3300005450\|Ga0066682_10402679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	876	Open in IMG/M
3300005451\|Ga0066681_10007495	All Organisms → cellular organisms → Bacteria	5165	Open in IMG/M
3300005451\|Ga0066681_10018225	All Organisms → cellular organisms → Bacteria	3556	Open in IMG/M
3300005536\|Ga0070697_100047268	All Organisms → cellular organisms → Bacteria	3490	Open in IMG/M
3300005536\|Ga0070697_100640470	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005536\|Ga0070697_101708685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300005552\|Ga0066701_10527054	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300005554\|Ga0066661_10455358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	781	Open in IMG/M
3300005555\|Ga0066692_10376939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	899	Open in IMG/M
3300005569\|Ga0066705_10054908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2250	Open in IMG/M
3300005574\|Ga0066694_10095798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1384	Open in IMG/M
3300005586\|Ga0066691_10215464	All Organisms → Viruses → Predicted Viral	1121	Open in IMG/M
3300005598\|Ga0066706_10781576	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300006031\|Ga0066651_10631533	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300006032\|Ga0066696_10043459	All Organisms → cellular organisms → Bacteria	2483	Open in IMG/M
3300006034\|Ga0066656_10722026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	640	Open in IMG/M
3300006791\|Ga0066653_10216768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	973	Open in IMG/M
3300006794\|Ga0066658_10258924	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	931	Open in IMG/M
3300006796\|Ga0066665_10566178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	921	Open in IMG/M
3300006797\|Ga0066659_10051324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2604	Open in IMG/M
3300006797\|Ga0066659_10619376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
3300006854\|Ga0075425_100401971	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300007255\|Ga0099791_10002161	All Organisms → cellular organisms → Bacteria → Proteobacteria	7893	Open in IMG/M
3300007265\|Ga0099794_10018819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3102	Open in IMG/M
3300009038\|Ga0099829_10109002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2165	Open in IMG/M
3300009038\|Ga0099829_10250344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1444	Open in IMG/M
3300009088\|Ga0099830_10175735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1663	Open in IMG/M
3300009089\|Ga0099828_10778262	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	857	Open in IMG/M
3300009143\|Ga0099792_10142693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1311	Open in IMG/M
3300010301\|Ga0134070_10003905	All Organisms → cellular organisms → Bacteria	4491	Open in IMG/M
3300010301\|Ga0134070_10184103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	760	Open in IMG/M
3300010301\|Ga0134070_10264619	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	647	Open in IMG/M
3300010303\|Ga0134082_10331739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300010304\|Ga0134088_10340817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300010304\|Ga0134088_10486111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300010320\|Ga0134109_10021802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1972	Open in IMG/M
3300010321\|Ga0134067_10080849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1089	Open in IMG/M
3300010322\|Ga0134084_10047110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1258	Open in IMG/M
3300010336\|Ga0134071_10124450	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1240	Open in IMG/M
3300010391\|Ga0136847_12592821	All Organisms → cellular organisms → Bacteria → Proteobacteria	7324	Open in IMG/M
3300010397\|Ga0134124_12231121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300011269\|Ga0137392_10175717	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1742	Open in IMG/M
3300011270\|Ga0137391_10011355	All Organisms → cellular organisms → Bacteria	7143	Open in IMG/M
3300012096\|Ga0137389_11060343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	694	Open in IMG/M
3300012199\|Ga0137383_10214391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1410	Open in IMG/M
3300012206\|Ga0137380_10879765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
3300012207\|Ga0137381_10698504	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	882	Open in IMG/M
3300012209\|Ga0137379_10129267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2428	Open in IMG/M
3300012211\|Ga0137377_10158486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2170	Open in IMG/M
3300012351\|Ga0137386_10319617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1117	Open in IMG/M
3300012354\|Ga0137366_10379313	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1032	Open in IMG/M
3300012361\|Ga0137360_10388120	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1175	Open in IMG/M
3300012380\|Ga0134047_1029665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1595	Open in IMG/M
3300012402\|Ga0134059_1201553	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300012582\|Ga0137358_10018287	All Organisms → cellular organisms → Bacteria	4481	Open in IMG/M
3300012917\|Ga0137395_10702678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	731	Open in IMG/M
3300012930\|Ga0137407_10389280	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1289	Open in IMG/M
3300012944\|Ga0137410_11693052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300012972\|Ga0134077_10358969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	622	Open in IMG/M
3300012975\|Ga0134110_10026590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2252	Open in IMG/M
3300012976\|Ga0134076_10192602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300012977\|Ga0134087_10170103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	960	Open in IMG/M
3300013297\|Ga0157378_11608203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300014157\|Ga0134078_10373114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300014166\|Ga0134079_10213870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300015053\|Ga0137405_1015404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300017654\|Ga0134069_1088857	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1001	Open in IMG/M
3300017656\|Ga0134112_10023476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2136	Open in IMG/M
3300017656\|Ga0134112_10348682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300017659\|Ga0134083_10079478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1271	Open in IMG/M
3300017659\|Ga0134083_10352981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300017792\|Ga0163161_11958083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300018078\|Ga0184612_10469968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300018431\|Ga0066655_10021438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3016	Open in IMG/M
3300018468\|Ga0066662_11732676	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300019789\|Ga0137408_1024249	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1485	Open in IMG/M
3300021432\|Ga0210384_10715331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	896	Open in IMG/M
3300025910\|Ga0207684_10183150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1806	Open in IMG/M
3300025910\|Ga0207684_11000383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300026285\|Ga0209438_1130438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	680	Open in IMG/M
3300026297\|Ga0209237_1042224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2375	Open in IMG/M
3300026298\|Ga0209236_1058671	All Organisms → Viruses → Predicted Viral	1879	Open in IMG/M
3300026298\|Ga0209236_1070632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1654	Open in IMG/M
3300026306\|Ga0209468_1087454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1029	Open in IMG/M
3300026307\|Ga0209469_1042556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1464	Open in IMG/M
3300026323\|Ga0209472_1050487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1792	Open in IMG/M
3300026326\|Ga0209801_1247297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	679	Open in IMG/M
3300026328\|Ga0209802_1036207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2548	Open in IMG/M
3300026332\|Ga0209803_1074052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1438	Open in IMG/M
3300026507\|Ga0257165_1072791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300026537\|Ga0209157_1036901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2749	Open in IMG/M
3300026537\|Ga0209157_1188754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	886	Open in IMG/M
3300026540\|Ga0209376_1055332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2251	Open in IMG/M
3300026547\|Ga0209156_10159143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1092	Open in IMG/M
3300026550\|Ga0209474_10180151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1359	Open in IMG/M
3300027875\|Ga0209283_10860769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300027903\|Ga0209488_10569832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	824	Open in IMG/M
3300031720\|Ga0307469_10625757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	966	Open in IMG/M
3300031820\|Ga0307473_10545388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791	Open in IMG/M
3300032180\|Ga0307471_100276009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1752	Open in IMG/M
3300032180\|Ga0307471_100478848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1389	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.41%
Plants	Host-Associated → Plants	2.75%
Aquatic	Environmental → Aquatic	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Sediment	Environmental → Aquatic → Sediment	0.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.99%
Loam	Environmental → Terrestrial → Soil → Loam	6.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Lake	Environmental → Aquatic → Freshwater → Lake	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	30.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	21.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_100203434	3300002561	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAALSVLKPSMSRRRLSAPLHLVRRDRAATPDGEPPDFAWTS*
JGI25382J37095_100194235	3300002562	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066674_100205305	3300005166	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066674_100398122	3300005166	Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN*
Ga0066684_101937133	3300005179	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRGATPDGGPPNFVWTS*
Ga0070708_1000758182	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MATAADADDLVPFRNVTVISSTGTSLFCGVGGKSVWLPRRHISGRLCCMGDRGTLLIRRWVARDRHLLRSPGTVAASVLGPSMARRRLAARLHLVRRDRETLLAN*
Ga0070708_1009821842	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MATDDADDLVPFRNVTVISSTGTSLFCGIGGKSVWLPRRHISGRLYCMGDRGTLLIRRWIARDRHLLRPLAARAVSLLASSMARRRLAIQLHVVR*
Ga0066689_105474271	3300005447	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPASVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066682_104026791	3300005450	Soil	CKGHRSLPTCARRGLRKENRAMPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066681_100074951	3300005451	Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVARDRHLLRPPGTAAVSALGPSVSWRRLVAQLHSVRRDRETHLAN*
Ga0066681_100182253	3300005451	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0070697_1000472684	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MITADDADDLVPFRNVTIISSTGTSLFCGVGGKNVWLPRRHVSGRLYTMGDRGTLLIRRWVARDRHLLRPPETAATAVLGASMSRRRLATGLHLVRRDREVPLAN*
Ga0070697_1006404701	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NVTVISSTATALFCGVRGKSVWLLRKHISGRLCMGDRGTLLIRRWVARDKSLIGRPATLAGSSLGSSKPWRRLVTPLHLQRADREANLAS*
Ga0070697_1017086851	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MITAVDADDLVPFSNATVISSTGTSMLCRIGGKSVWLPRRHISGTLFCVGDRGPLLIRRWIARDRCLLRKPGTTAVSALGPSLWRRRLAAHLHLVRRD
Ga0066701_105270541	3300005552	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDSVWTS*
Ga0066661_104553582	3300005554	Soil	DLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLPPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066692_103769391	3300005555	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFAWTS*
Ga0066705_100549084	3300005569	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFAWTS*
Ga0066694_100957984	3300005574	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVDGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRGATP
Ga0066691_102154642	3300005586	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAALSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066706_107815762	3300005598	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDSVWTS*
Ga0066651_106315331	3300006031	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAA
Ga0066696_100434595	3300006032	Soil	MATADNADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN*
Ga0066656_107220261	3300006034	Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLV
Ga0066653_102167682	3300006791	Soil	MPTADNTDDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066658_102589241	3300006794	Soil	MATDDADDLVPFQEVRVIRSTAPALLWGIGEKSVWLPRRHIGGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLRPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0066665_105661782	3300006796	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPAKVAVSVLGPSMSRRRLAAPLHLVRRDRGATPEGGPPNFVWTS*
Ga0066659_100513241	3300006797	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRL
Ga0066659_106193761	3300006797	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRL
Ga0075425_1004019711	3300006854	Populus Rhizosphere	MPTAGDADDLVPFRNVTVISSTGTAMFCGVGGKSVWLPRRHVSGRLCCMGDRGTLLIRRWVARDRHLLHPPETVAVSALGSSTARRRLAAQLHLVRRDRETHLAY*
Ga0099791_100021613	3300007255	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSILKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0099794_100188194	3300007265	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLHPPARAAVSVLKPSRSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0099829_101090022	3300009038	Vadose Zone Soil	MATAADADDLVPFRNVTVISSTGTSLFCGVGGKSVWLPRRHISGRLCCMGDRGTLLIRRWVARDRRLLRSPGTAAASVLGPSMARRRLAARLHLVRRDRETLLAT*
Ga0099829_102503444	3300009038	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPATVAVSVLGPSMSRRRLAVPLHLVRRDR
Ga0099830_101757353	3300009088	Vadose Zone Soil	MATAADADDLVPFRNVTVISSTGTSLFCGVGGRSVWLPRRHISGRLCCMGDRGTLLIRRWVARDRRLLRSPGTAAASVLGPSMARRRLAARLHLVRRDRETLLAT*
Ga0099828_107782621	3300009089	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPATVAVSVLGPSMSRRRLAVPLHLVRRDRVATPDGAPPGLVWTS*
Ga0099792_101426932	3300009143	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARAAVSVLGPSMARRRLAARLHLVRRDRETLLAT*
Ga0134070_100039059	3300010301	Grasslands Soil	MATADNADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSMSWRRLAAQLHLVRRDRETPLAN*
Ga0134070_101841031	3300010301	Grasslands Soil	MATADDADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRCLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0134070_102646191	3300010301	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVDGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHL
Ga0134082_103317391	3300010303	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRD
Ga0134088_103408171	3300010304	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDG
Ga0134088_104861111	3300010304	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRD
Ga0134109_100218024	3300010320	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCEVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN*
Ga0134067_100808491	3300010321	Grasslands Soil	MPTADNADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN*
Ga0134084_100471102	3300010322	Grasslands Soil	MPTADNADDLVRFRNVTIISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0134071_101244502	3300010336	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLVAQLHLVQRDRETPLAN*
Ga0136847_125928212	3300010391	Freshwater Sediment	MATAADDLVPFRNVTVISSTGTALLCGVGGKSVWLPRRHISDRLCCMGDRGTFLIRRRIARDRRLLRPLGTAAVPALGPSKPWRRLATQLHLLRADRETHLAN*
Ga0134124_122311212	3300010397	Terrestrial Soil	MATEEVDDLVAFRNVTVISSTSTSLFCRVGSKSVWLPRRHISGRLGCMGDRGTLLIRRRVARDRCLVRPSSAPVVPSLGSSMPWRRLVAPLQLVLAGSGDLRRDSKPARD*
Ga0137392_101757173	3300011269	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRTASPDGGPPGFVWTS*
Ga0137391_100113555	3300011270	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARAAVSVLGPSMLRRRLAATLHLVRRDRAATPDGAPPDFVWTS*
Ga0137389_110603431	3300012096	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPATVAVSVLGPSMSRRRLAAPLHLVRRDRGATPDGGPPGFVWTS*
Ga0137383_102143913	3300012199	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGEPPDFAWTS*
Ga0137380_108797651	3300012206	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPAIVAVSVLGPSMSRRLLAAPLHLVRRDRAATPDGGPPGFVWTS*
Ga0137381_106985041	3300012207	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLAA
Ga0137379_101292673	3300012209	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPASVAVSVLGPSMSRRRLAATLHLVRRDRGATPDGGPPDFVGTS*
Ga0137377_101584862	3300012211	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0137386_103196171	3300012351	Vadose Zone Soil	GLRKENRAMPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPAKVAVSVLGPSMSRRRLAAPLHLVRRDRGATPEGGPPNFVWTS*
Ga0137366_103793132	3300012354	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRCLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0137360_103881201	3300012361	Vadose Zone Soil	MTTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0134047_10296651	3300012380	Grasslands Soil	MATADDADDLVRFRNVTVISSTCTALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0134059_12015531	3300012402	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN*
Ga0137358_100182874	3300012582	Vadose Zone Soil	MATADDADDLVRFRNVTVISSTGTALCCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRMLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN*
Ga0137395_107026781	3300012917	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRGATPDGNPP
Ga0137407_103892801	3300012930	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRGATPDGGPPDSVWTS*
Ga0137410_116930521	3300012944	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRCLLHPPARAAVSVLKPARSRRRLAAPLHLVRRDRAATPDGGPPDF
Ga0134077_103589691	3300012972	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSMSWRRLAAQLHLVRRDRETPLAN*
Ga0134110_100265905	3300012975	Grasslands Soil	MPTADNGDDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0134076_101926021	3300012976	Grasslands Soil	KENLAMATADNADDLVPFQNVTVISSTATALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN*
Ga0134087_101701032	3300012977	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPASVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0157378_116082031	3300013297	Miscanthus Rhizosphere	MATEEVDDLVAFRNVTVISSTSTSLFCRVGSKSVWLPRRHISGRLGCMGDRGTLLIRRRVARDRCLVRPSSAPVVPSLGSSMPWRRLVAPLRLVLAGSGDLRRDSKPARD*
Ga0134078_103731141	3300014157	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVARDRHLLRPPGMAAVSALGPPVSWRRLMAQLHSV*
Ga0134079_102138702	3300014166	Grasslands Soil	MPTADNADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS*
Ga0137405_10154041	3300015053	Vadose Zone Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVLVRRDRETPLTN*
Ga0134069_10888573	3300017654	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGP
Ga0134112_100234765	3300017656	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRGATPDGGPPNFVWTS
Ga0134112_103486821	3300017656	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAKLHLVRRDRETPLAN
Ga0134083_100794782	3300017659	Grasslands Soil	MSTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS
Ga0134083_103529811	3300017659	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVARDRHLLRPPGTGAVSALAPSVSWRRL
Ga0163161_119580831	3300017792	Switchgrass Rhizosphere	MATEEVDDLVAFRNVTVISSTSTSLFCRVGSKSVWLPRRHISGRLGCMGDRGTLLIRRRVARDRCLVHPSSAPVVPSLGSSMPWRRLVAPLRLVLAGSGDLRRDSKPARD
Ga0184612_104699682	3300018078	Groundwater Sediment	MATADDADDLVPFRNVTVISSTATALFCGVGGKSVWLPRKHVSGRLSCMGDRGTLLIRRSIARDRCVIRPHGTAAVSALGPSKPWRRLVTQLHVLRADRQIH
Ga0066655_100214387	3300018431	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN
Ga0066662_117326761	3300018468	Grasslands Soil	MPTADNAGDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS
Ga0137408_10242493	3300019789	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRGATPDGGPPDSVWTS
Ga0210384_107153311	3300021432	Soil	MATADDADDLVRFRNVTIISSTASALLCGVGGKSVWLPKKHTSGRLWCMGDRGTLLIRRWVARDRRLVSPRGPAGVSALGPSKPWRRLATPLRLASRLPHPARGA
Ga0207684_101831502	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATDDADDLVPFRNVTVISSTGTSLFCGIGGKSVWLPRRHISGRLYCMGDRGTLLIRRWIARDRHLLRPLAVRAVSLLASSMARRRLAIQLHVVR
Ga0207684_110003831	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATAADADDLVPFRNVTVISSTGTSLFCGVGGKSVWLPRRHISGRLCCMGDRGTLLIRRWVARDRHLLRSPGTVAASVLGPSMARRRLAARLHLVRRDRETLLAN
Ga0209438_11304381	3300026285	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLHPPARAAVSVLKPSRSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS
Ga0209237_10422245	3300026297	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFVWTS
Ga0209236_10586714	3300026298	Grasslands Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAALSVLKPSMSRRRLSAPLHLVRRDRAATPDGEPPDFAWTS
Ga0209236_10706323	3300026298	Grasslands Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSMSWRRLAAQLHLVRRDRETPLAN
Ga0209468_10874543	3300026306	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVDGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLA
Ga0209469_10425563	3300026307	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS
Ga0209472_10504871	3300026323	Soil	MATADDADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVARDRHLLRPPGTAAVSALGPSVSWRRLMAQLHSV
Ga0209801_12472971	3300026326	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDSVWTS
Ga0209802_10362076	3300026328	Soil	MPTADNADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN
Ga0209803_10740522	3300026332	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLHLVRRDRAATPDGGPPDFAWTS
Ga0257165_10727911	3300026507	Soil	MITAADADDLVPFRNVTVISSTGTALFCGVGGKSVWLPRRHISGKLRGMGDRGTLLIRRWIARDRHLLRPPGTAADSVLGSSMARRRLAARLHLVRRDRETHPAPDDAFRASRG
Ga0209157_10369017	3300026537	Soil	MATADNADDLVRFRNVTVISSTGTALFCGVGGKSVWLPRRHISGRLRCMGDRGTLLIRRWVAHDRRLLRPPGTGVVSALGPSVSWRRLAAQLHLVRRDRETPLAN
Ga0209157_11887542	3300026537	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDR
Ga0209376_10553321	3300026540	Soil	MPTADNTDDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVR
Ga0209156_101591432	3300026547	Soil	MPTADNTDDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFVWTS
Ga0209474_101801512	3300026550	Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRAATPDGGPPDFAWTS
Ga0209283_108607691	3300027875	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPATVAVSVLGPSMSRRRLAVP
Ga0209488_105698321	3300027903	Vadose Zone Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSMSRRRLSAPLH
Ga0307469_106257572	3300031720	Hardwood Forest Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSSMGDRGTLLIRRWVAHDRSLLRPPAKVAVSVLGPSMSRRRLAAPLHLVRRDRGATPEGGPPNFVWTS
Ga0307473_105453881	3300031820	Hardwood Forest Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSISPRRLAAPLHLVRRDRAATTDGGPPDFVWTS
Ga0307471_1002760091	3300032180	Hardwood Forest Soil	MPTADNAHDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRSLLRPPARVAVSVLGPSMSRRRLAAPLHLVRRDRGATPPNFVWTS
Ga0307471_1004788481	3300032180	Hardwood Forest Soil	MPTADNADDLVRFRNVTVISSTATALFCGVGGKSVWLPRRHISGRLSCMGDRGTLLIRRWVAHDRCLLRPPARAAVSVLKPSISRRRLAAPLHLVRRDRAATTDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088658

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences