Metagenome Family F088639

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088639
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	96 residues
Representative Sequence	MGKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGDGTRYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF
Number of Associated Samples	66
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	18.35 %
% of genes near scaffold ends (potentially truncated)	42.20 %
% of genes from short scaffolds (< 2000 bps)	72.48 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (85.321 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.532 % of family members)
Environment Ontology (ENVO)	Unclassified (60.550 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.45% β-sheet: 28.93% Coil/Unstructured: 44.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF08818	DUF1801	3.67
PF00561	Abhydrolase_1	3.67
PF00903	Glyoxalase	3.67
PF00583	Acetyltransf_1	2.75
PF08327	AHSA1	2.75
PF00211	Guanylate_cyc	2.75
PF13419	HAD_2	2.75
PF00271	Helicase_C	1.83
PF09948	DUF2182	1.83
PF04014	MazE_antitoxin	1.83
PF01022	HTH_5	1.83
PF07992	Pyr_redox_2	1.83
PF07681	DoxX	1.83
PF00702	Hydrolase	0.92
PF01545	Cation_efflux	0.92
PF04185	Phosphoesterase	0.92
PF08734	GYD	0.92
PF07690	MFS_1	0.92
PF12697	Abhydrolase_6	0.92
PF01872	RibD_C	0.92
PF00082	Peptidase_S8	0.92
PF06177	QueT	0.92
PF01850	PIN	0.92
PF13429	TPR_15	0.92
PF11528	DUF3224	0.92
PF00106	adh_short	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	3.67
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	3.67
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	3.67
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	2.75
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.83
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.83
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.92
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.92
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.92
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.92
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.92
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.92
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.92
COG4708	ECF-type transporter of queuosine precursor, membrane (S) component	Translation, ribosomal structure and biogenesis [J]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	85.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.93 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	4.59 %
Unclassified	root	N/A	2.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	3.67 %
Unclassified	root	N/A	2.75 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	3.67 %
Unclassified	root	N/A	2.75 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	3.67 %
Unclassified	root	N/A	2.75 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	0.92 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	3.67 %
Unclassified	root	N/A	2.75 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	0.92 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	3.67 %
Unclassified	root	N/A	2.75 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
unclassified Rhodothermaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae	0.92 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
archaeon 13_1_20CM_2_54_9	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	3.67 %
Unclassified	root	N/A	2.75 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %
Rhodothermaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae → Rhodothermaceae bacterium	0.92 %
archaeon RBG_16_50_20	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	0.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10081991	All Organisms → cellular organisms → Archaea	1164	Open in IMG/M
3300002561\|JGI25384J37096_10091359	All Organisms → cellular organisms → Archaea	1082	Open in IMG/M
3300002908\|JGI25382J43887_10061068	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300002908\|JGI25382J43887_10084926	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300002908\|JGI25382J43887_10148512	All Organisms → cellular organisms → Archaea	1193	Open in IMG/M
3300005174\|Ga0066680_10335520	All Organisms → cellular organisms → Archaea	964	Open in IMG/M
3300005180\|Ga0066685_10334603	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300005181\|Ga0066678_10436148	All Organisms → cellular organisms → Archaea	871	Open in IMG/M
3300005446\|Ga0066686_10018687	All Organisms → cellular organisms → Bacteria	3834	Open in IMG/M
3300005446\|Ga0066686_10745023	All Organisms → cellular organisms → Archaea	657	Open in IMG/M
3300005447\|Ga0066689_10177710	All Organisms → cellular organisms → Archaea	1280	Open in IMG/M
3300005540\|Ga0066697_10047193	All Organisms → cellular organisms → Bacteria	2432	Open in IMG/M
3300005540\|Ga0066697_10205213	All Organisms → cellular organisms → Archaea	1171	Open in IMG/M
3300005554\|Ga0066661_10081283	All Organisms → cellular organisms → Archaea	1910	Open in IMG/M
3300005558\|Ga0066698_11044596	All Organisms → cellular organisms → Archaea	518	Open in IMG/M
3300005559\|Ga0066700_11129589	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	512	Open in IMG/M
3300005561\|Ga0066699_10063201	All Organisms → cellular organisms → Archaea	2326	Open in IMG/M
3300005568\|Ga0066703_10117486	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300005569\|Ga0066705_10875535	All Organisms → cellular organisms → Archaea	533	Open in IMG/M
3300005586\|Ga0066691_10557588	All Organisms → cellular organisms → Archaea	683	Open in IMG/M
3300006794\|Ga0066658_10022650	All Organisms → cellular organisms → Archaea	2471	Open in IMG/M
3300006797\|Ga0066659_10506200	All Organisms → cellular organisms → Archaea	969	Open in IMG/M
3300007255\|Ga0099791_10007295	All Organisms → cellular organisms → Archaea	4574	Open in IMG/M
3300007258\|Ga0099793_10003980	All Organisms → cellular organisms → Archaea	5205	Open in IMG/M
3300007258\|Ga0099793_10109034	All Organisms → cellular organisms → Archaea	1286	Open in IMG/M
3300007258\|Ga0099793_10310164	All Organisms → cellular organisms → Archaea	767	Open in IMG/M
3300007265\|Ga0099794_10000722	All Organisms → cellular organisms → Archaea	11102	Open in IMG/M
3300009012\|Ga0066710_100016125	All Organisms → cellular organisms → Bacteria	7984	Open in IMG/M
3300009012\|Ga0066710_100611616	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	1654	Open in IMG/M
3300009012\|Ga0066710_101456565	All Organisms → cellular organisms → Archaea	1059	Open in IMG/M
3300009012\|Ga0066710_102350286	All Organisms → cellular organisms → Archaea	774	Open in IMG/M
3300009038\|Ga0099829_10012130	All Organisms → cellular organisms → Archaea	5639	Open in IMG/M
3300009038\|Ga0099829_10088543	All Organisms → cellular organisms → Archaea	2386	Open in IMG/M
3300009088\|Ga0099830_10320242	All Organisms → cellular organisms → Archaea	1241	Open in IMG/M
3300009089\|Ga0099828_11651912	All Organisms → cellular organisms → Archaea	564	Open in IMG/M
3300009137\|Ga0066709_100064521	All Organisms → cellular organisms → Archaea	4252	Open in IMG/M
3300009137\|Ga0066709_100208948	All Organisms → cellular organisms → Archaea	2573	Open in IMG/M
3300009137\|Ga0066709_102812173	All Organisms → cellular organisms → Archaea	645	Open in IMG/M
3300010304\|Ga0134088_10012557	All Organisms → cellular organisms → Archaea	3647	Open in IMG/M
3300010304\|Ga0134088_10056662	All Organisms → cellular organisms → Archaea	1806	Open in IMG/M
3300010304\|Ga0134088_10497938	All Organisms → cellular organisms → Archaea	600	Open in IMG/M
3300010333\|Ga0134080_10049066	All Organisms → cellular organisms → Bacteria → Acidobacteria	1657	Open in IMG/M
3300010335\|Ga0134063_10127127	All Organisms → cellular organisms → Archaea	1171	Open in IMG/M
3300010335\|Ga0134063_10520907	All Organisms → cellular organisms → Archaea	597	Open in IMG/M
3300011269\|Ga0137392_11203724	All Organisms → cellular organisms → Archaea	616	Open in IMG/M
3300011270\|Ga0137391_10218563	Not Available	1655	Open in IMG/M
3300011270\|Ga0137391_10483909	All Organisms → cellular organisms → Archaea	1049	Open in IMG/M
3300011270\|Ga0137391_11116874	All Organisms → cellular organisms → Archaea	636	Open in IMG/M
3300011271\|Ga0137393_10060433	All Organisms → cellular organisms → Archaea	2993	Open in IMG/M
3300012189\|Ga0137388_10082405	All Organisms → cellular organisms → Archaea	2716	Open in IMG/M
3300012189\|Ga0137388_10375196	All Organisms → cellular organisms → Archaea	1314	Open in IMG/M
3300012189\|Ga0137388_10976542	All Organisms → cellular organisms → Archaea	782	Open in IMG/M
3300012201\|Ga0137365_10269202	All Organisms → cellular organisms → Archaea	1265	Open in IMG/M
3300012202\|Ga0137363_10049390	All Organisms → cellular organisms → Archaea	3007	Open in IMG/M
3300012203\|Ga0137399_10028881	All Organisms → cellular organisms → Archaea	3784	Open in IMG/M
3300012203\|Ga0137399_10138971	All Organisms → cellular organisms → Archaea	1928	Open in IMG/M
3300012203\|Ga0137399_10270851	All Organisms → cellular organisms → Archaea	1397	Open in IMG/M
3300012203\|Ga0137399_10490813	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1030	Open in IMG/M
3300012203\|Ga0137399_10652600	All Organisms → cellular organisms → Archaea	885	Open in IMG/M
3300012203\|Ga0137399_10746522	All Organisms → cellular organisms → Archaea	824	Open in IMG/M
3300012203\|Ga0137399_11101401	All Organisms → cellular organisms → Archaea	669	Open in IMG/M
3300012205\|Ga0137362_11263340	All Organisms → cellular organisms → Archaea	623	Open in IMG/M
3300012363\|Ga0137390_10414034	All Organisms → cellular organisms → Archaea	1325	Open in IMG/M
3300012918\|Ga0137396_10003855	All Organisms → cellular organisms → Archaea	8523	Open in IMG/M
3300012918\|Ga0137396_10008052	All Organisms → cellular organisms → Bacteria	6323	Open in IMG/M
3300012918\|Ga0137396_10643138	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012918\|Ga0137396_10828477	All Organisms → cellular organisms → Archaea	680	Open in IMG/M
3300012918\|Ga0137396_10882811	All Organisms → cellular organisms → Archaea	656	Open in IMG/M
3300012922\|Ga0137394_11427815	All Organisms → cellular organisms → Archaea	552	Open in IMG/M
3300012927\|Ga0137416_10110211	All Organisms → cellular organisms → Archaea	2087	Open in IMG/M
3300012927\|Ga0137416_10250263	All Organisms → cellular organisms → Archaea	1447	Open in IMG/M
3300012944\|Ga0137410_12097952	All Organisms → cellular organisms → Archaea	504	Open in IMG/M
3300012976\|Ga0134076_10152474	All Organisms → cellular organisms → Archaea	948	Open in IMG/M
3300012976\|Ga0134076_10197469	All Organisms → cellular organisms → Archaea	842	Open in IMG/M
3300012977\|Ga0134087_10095776	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae → Rhodothermaceae bacterium	1237	Open in IMG/M
3300014150\|Ga0134081_10294113	All Organisms → cellular organisms → Archaea	581	Open in IMG/M
3300014154\|Ga0134075_10025361	All Organisms → cellular organisms → Archaea	2384	Open in IMG/M
3300014154\|Ga0134075_10254807	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	759	Open in IMG/M
3300015358\|Ga0134089_10076389	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon RBG_16_50_20	1256	Open in IMG/M
3300015358\|Ga0134089_10112408	All Organisms → cellular organisms → Archaea	1052	Open in IMG/M
3300015358\|Ga0134089_10445779	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
3300018431\|Ga0066655_10074828	All Organisms → cellular organisms → Archaea	1827	Open in IMG/M
3300018431\|Ga0066655_10758682	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_54_9	658	Open in IMG/M
3300018433\|Ga0066667_10140265	Not Available	1687	Open in IMG/M
3300018468\|Ga0066662_10631518	Not Available	1009	Open in IMG/M
3300026296\|Ga0209235_1060692	All Organisms → cellular organisms → Archaea	1769	Open in IMG/M
3300026296\|Ga0209235_1100275	All Organisms → cellular organisms → Archaea	1249	Open in IMG/M
3300026296\|Ga0209235_1218441	All Organisms → cellular organisms → Archaea	621	Open in IMG/M
3300026297\|Ga0209237_1118033	All Organisms → cellular organisms → Archaea	1123	Open in IMG/M
3300026297\|Ga0209237_1198248	All Organisms → cellular organisms → Archaea	649	Open in IMG/M
3300026310\|Ga0209239_1084954	All Organisms → cellular organisms → Archaea	1362	Open in IMG/M
3300026313\|Ga0209761_1069003	All Organisms → cellular organisms → Bacteria → Proteobacteria	1884	Open in IMG/M
3300026328\|Ga0209802_1265927	All Organisms → cellular organisms → Archaea	578	Open in IMG/M
3300026333\|Ga0209158_1028620	All Organisms → cellular organisms → Archaea	2429	Open in IMG/M
3300026334\|Ga0209377_1027009	All Organisms → cellular organisms → Archaea	2808	Open in IMG/M
3300026334\|Ga0209377_1177765	All Organisms → cellular organisms → Archaea	750	Open in IMG/M
3300026334\|Ga0209377_1223597	All Organisms → cellular organisms → Archaea	620	Open in IMG/M
3300026342\|Ga0209057_1019401	All Organisms → cellular organisms → Archaea	3874	Open in IMG/M
3300026499\|Ga0257181_1064028	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300026529\|Ga0209806_1035426	All Organisms → cellular organisms → Archaea	2450	Open in IMG/M
3300026532\|Ga0209160_1232977	All Organisms → cellular organisms → Archaea	635	Open in IMG/M
3300026537\|Ga0209157_1103256	All Organisms → cellular organisms → Bacteria → Acidobacteria	1349	Open in IMG/M
3300026548\|Ga0209161_10068541	All Organisms → cellular organisms → Archaea	2238	Open in IMG/M
3300026551\|Ga0209648_10396645	All Organisms → cellular organisms → Archaea	909	Open in IMG/M
3300027671\|Ga0209588_1000247	All Organisms → cellular organisms → Archaea	14406	Open in IMG/M
3300027846\|Ga0209180_10071699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1944	Open in IMG/M
3300028536\|Ga0137415_10001830	All Organisms → cellular organisms → Archaea	21170	Open in IMG/M
3300028536\|Ga0137415_10047479	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	4177	Open in IMG/M
3300028536\|Ga0137415_10357518	All Organisms → cellular organisms → Archaea	1264	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	46.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	22.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_100819911	3300002561	Grasslands Soil	YTSKEKTGVGASAHHSGQVMGRKMEWDGRVIEWLENDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
JGI25384J37096_100913592	3300002561	Grasslands Soil	YSSREKTGLGTTAHHSGQIMGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
JGI25382J43887_100610682	3300002908	Grasslands Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGTPQKMRMKAWNRVAKEGDGTSYSLEVEYVPPYSIFGMIMDLIMIRRSIRKSVQKSTRNLKRILEQS*
JGI25382J43887_100849263	3300002908	Grasslands Soil	VGVSAHHSGQVMGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVEKEGNGTRYSLEVEYVPPYSILGRIMDRIMIKRNIQKMVQHSTQNLKGILE*
JGI25382J43887_101485121	3300002908	Grasslands Soil	VGISAHHVGRVMGRKMEWDGRVTEWAENDRIVWQAISGTPEAMRMKAVNSVEKEGEGTRYYLEVEYMPPYSIFGKIMDLIMIKRSIREMVQHSTQNLKRILEQ*
Ga0066680_103355201	3300005174	Soil	MGRKMEWDGRVIEWAENDSIVWRAISGTPKAMKMKALNRVEKEGDGTRYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQ*
Ga0066685_103346032	3300005180	Soil	MEWDGRVIEWAENNSIVWQAISGTPQAMRMKAVNRVEKEGDGTRYSLEVEYVPPYSILGRIMDLLMIKRNIRKMVKHSTQNLKRILEQF*
Ga0066678_104361481	3300005181	Soil	WDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVEKEENGTRYSLEVEYVPPYSILGRIMDPIMIKRKIQKMVQHSTQNLKRILEQ*
Ga0066686_100186875	3300005446	Soil	VMGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
Ga0066686_107450231	3300005446	Soil	CNDWLEFVSSARYTSSEKTGVGASAHHSGQVMGKKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGKGTRYFLEVEYMPPYSILGRIMDLIMIKRNVRKMVQHSTQNLKRVLEQF*
Ga0066689_101777101	3300005447	Soil	HDICNDWLEFVSSARYTSKEKTGVGVSAHHSGQVMGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVEKEGNGTRYSLEVEYMPPYSILGRIMDPIMIKRNIEKMVQHSTQNLKIILE*
Ga0066697_100471931	3300005540	Soil	MEWDGRVIEWAENDSVVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRNIRKTAQHSTQNLKQILEQF*
Ga0066697_102052131	3300005540	Soil	MGKKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGKGTRYFLEVEYMPPYSILGRIMDLIMIKRNVRKMVQHSTQNLKRVLEQF*
Ga0066661_100812833	3300005554	Soil	MGRKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
Ga0066698_110445961	3300005558	Soil	RKMEWDGRVIEWTENYSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYLPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0066700_111295892	3300005559	Soil	AHHSGQVMGRKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
Ga0066699_100632014	3300005561	Soil	MEWDGRVIEWAENDSIVWQAISGIPEAMRMKAVNRVEKEGEGTRYSLEVEYMPPYSILGRIMDLIMIKRNIRKMVQHSAQNLKRILERF*
Ga0066703_101174863	3300005568	Soil	VGASAHHSGQVMGRKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
Ga0066705_108755352	3300005569	Soil	GRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGEGTRYSLELEYMPPYSILGRIMDLIMIKRKLRKMVQHSTQNLKRVLEQL*
Ga0066691_105575881	3300005586	Soil	AHHSGQVMGRKMEWDGRVIEWAENDSVVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRNIRKTAQHSTQNLKRILEQF*
Ga0066658_100226501	3300006794	Soil	VGVSAHHSGQVMGRKMEWEGRVIEWTKNDSIIWQATSGTPQAMKMKAVNRVEKEGKGTHYSLEVEYMPPYSILGKIMDLVRIKRNMREMVQHSTQNLKRI
Ga0066659_105062001	3300006797	Soil	EWTENYSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYLPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0099791_100072953	3300007255	Vadose Zone Soil	MGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0099793_100039804	3300007258	Vadose Zone Soil	MGKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGDGTRYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF*
Ga0099793_101090341	3300007258	Vadose Zone Soil	MGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAANRVKKEGEGTRYYLEVEYRPPYSILGRIMDLIMIKRNVRKMVQHSTQNLKRVLEQL*
Ga0099793_103101641	3300007258	Vadose Zone Soil	MGRKMEWDGRVIEWTENYSIVWEAISGTPQAMRMKAMNRVEMEGDGARYFLDLEYLPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0099794_100007221	3300007265	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGIPQKMGMKAWNRVAKEGDGTRYSLEVEYVPPYSILGKIMDLVMIRRSIRKSVQNSTQNLKRIMEQS*
Ga0066710_1000161257	3300009012	Grasslands Soil	VGASAHHSGQVMGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRNIRKTAQHSTQNLKRILEQF
Ga0066710_1006116162	3300009012	Grasslands Soil	QVMGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF
Ga0066710_1014565652	3300009012	Grasslands Soil	MGKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGDGTRYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF
Ga0066710_1023502862	3300009012	Grasslands Soil	LGRKMEWDGRVIEWAENNSIVWQAISGTPQAMRMKAVNRVEKEGDGTRYSLEVEYVPPYSILGRIMDLLMIKRNIRKMVKHSTQNLKRILEQF
Ga0099829_100121305	3300009038	Vadose Zone Soil	MGRKMQWDGKVTEWTENGCIAWEAVSGTPQKMRMKAWNRVAKEGDGTSYSLEVEYLPPYSVFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQT*
Ga0099829_100885434	3300009038	Vadose Zone Soil	MEWDGRIIEWAENGRIVWEATSGTPGKMKMKAVNRVEKEGIGTRYSLEVEYAPPYSILGKIMDLVMIRRSLGKSIQSSNLNLKRISEQT*
Ga0099830_103202421	3300009088	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGTPQKMRMKAWNRVAKEGDGTSYSLEVEYLPPYSVFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQT*
Ga0099828_116519121	3300009089	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDGTIYSLEVEYVPPYSIFGKIMDLIMISRSMRKSVQKSTQNLKRILEHS*
Ga0066709_1000645212	3300009137	Grasslands Soil	MGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
Ga0066709_1002089482	3300009137	Grasslands Soil	MGRKMEWDGRVIEWAENDSIVWQATSGTPQAMKMRAMNRVEKEGEGTRYSLEVEYIPPYSILGRIMNLVMIKRNMREMVQHSTQNLKRILEQ*
Ga0066709_1028121731	3300009137	Grasslands Soil	MGRKMEWDGGVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGNGTRYSLEVEYMPPYSILGRIMDPIMIKRNIEKMVQHSTQNLKTNRE*
Ga0134088_100125572	3300010304	Grasslands Soil	MGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRTKAMNRVEMEGDGARYSLDLEYLPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0134088_100566622	3300010304	Grasslands Soil	MGRKMQWDGKVTEWTENGCVAWEAVSGTPKKMGMKAWNRVAKEGDGTRYSLEVEYVPPYSILGKIMDLVMIRRSIRKSVQNSTQNLKGVLEQS*
Ga0134088_104979381	3300010304	Grasslands Soil	MGRKMEWDGRVIEWAENDSVVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRNIRKTAQHSTQNLKRILEQF*
Ga0134080_100490662	3300010333	Grasslands Soil	VSSARYTSREKTGVGASAHHSGQVLGRKMEWDGRVIEWAENNSIVWQAISGTPQAMRMKAANRVEKEGNGTRYSLEVEYVPPYSILGRIMDLIMIKRNIRKMVQQSAQNLKRILEQF*
Ga0134063_101271271	3300010335	Grasslands Soil	DGRVIEWAENDSVVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRNIRKTAQHSTQNLKRILEQF*
Ga0134063_105209071	3300010335	Grasslands Soil	MGRKMEWDGRVIEWTENYSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYLPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0137392_112037241	3300011269	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGIPQKMGMKAWNRVAKEGDGTRYSLEVEYVPPYSILGKIMDLVMIRRSIRKSVQNSTQNLKRILEQS*
Ga0137391_102185632	3300011270	Vadose Zone Soil	MGRKMQWDGRVTEWTENNSIVWEAVSGTPQAMRMKATNRVEKEGDGARYSLEVEYVPPYSILGRIMDQIMIKRGVRKMAQHSTKNLKRILEQG*
Ga0137391_104839091	3300011270	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGTPQKMGMKARNRVAKEGDGTIYSLEVEYVPPYSIFGKIMDLIMISRSMRKSVQKSTQNLKRILEHP*
Ga0137391_111168742	3300011270	Vadose Zone Soil	GTSAHHSGQVMGRKMEWDGRVIEWTENSSIVWEAISGTPQAMRMKAMNRVEKEEDGARYALELEYAPPYSIFGRIMNLIMIKRGIRKMVQHSTHNLKRILEQC*
Ga0137393_100604332	3300011271	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDGTSYSLEVEYLPPYSVFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQT*
Ga0137388_100824051	3300012189	Vadose Zone Soil	RKMQWDGRVIEWAENGCIAWEAVSGTPQKMGMKAWNRVEKEGEGTGFSLEVQYVPPYSTFGKIMDLIMIKRTMRKSVRNSTQNLKRILEQ*
Ga0137388_103751961	3300012189	Vadose Zone Soil	MGRKMQWDGKVTEWTENGGIAWEAVSGTAQKMRMKAWNRVAKEGDGTSYSLEVEYLPPYSVFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQT*
Ga0137388_109765422	3300012189	Vadose Zone Soil	MGRKMEWDGKVTEWTENSYIVWEATTGTPQTMRMKAMNRVEKEEDGARYSLEVEYVPPYSIFGRIMDPIMIKRGIRKIVQHSTQNLKRILEQS*
Ga0137365_102692022	3300012201	Vadose Zone Soil	MGRKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGEGTRYSLEVEYMPPYSILGRIMDLIMIKRNVRKMVQHSTQNLKRVLEQL*
Ga0137363_100493902	3300012202	Vadose Zone Soil	MGRKMEWDGRVIEWVENDSIVWQAISGTPEAMGMKAMNRVEREGDGTRYSLEVEYIPPYSILGKIMDLIMIKRNIRKMTQRSTRNLKRILEQF*
Ga0137399_100288813	3300012203	Vadose Zone Soil	MGRKMEWDGRVIEWAENDCIVWQAISGTPQAMRMKAVNRVEKEGNGTRYSLEVEYMPPYLVLGRIMDLVMIKRNIRKMVQHSTQNLKRILESS*
Ga0137399_101389711	3300012203	Vadose Zone Soil	VMGKKMEWDGRVIEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGDGTRYSLEVEYVPPYSIFGRIMDPIMIKRSIRKMVQHSTQNLKRILE*
Ga0137399_102708513	3300012203	Vadose Zone Soil	MGRKMEWDGRVIEWAENDSIVWQATSGTPQAMKMKAMNHVEKEGKGTRYSLEVEYMPPYSILGRIMDLVIIKRNIREMVQHSTHNLKRILEQ*
Ga0137399_104908131	3300012203	Vadose Zone Soil	MGRKMEWDGRVIEWAENDSIVWRAISGTPKAMKMKALNRVEKEGDGTRYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKR
Ga0137399_106526001	3300012203	Vadose Zone Soil	RYTSSEKTGVGASAHHSGQVMGRKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGEGTRYFLEVEYMPLYSILGRIMDLIMIKRNVRKMVQHSTQNLKRVLEQL*
Ga0137399_107465221	3300012203	Vadose Zone Soil	MGRRMRWDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDGTSYSLEVEYVPPYSIFGKIMDLIMIKRSMRKSVQNSTQNLKRILEQS*
Ga0137399_111014011	3300012203	Vadose Zone Soil	MGRKMEWDGRVTEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGIGTLYSLEVEYMPPYSIFGKIMDLIMIKRSIREMVQHSTQNLKRILEQMIG*
Ga0137362_112633401	3300012205	Vadose Zone Soil	MGRKMEWDGRVIEWAENDSVVWQAISGTPEAMRMKAANRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKTAQHSTQNLKRILEQF*
Ga0137390_104140341	3300012363	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDGTIYSLEVEYVPPYSIFGKIMDLIMISRSMRKSVQKSTQNLKRILEHP*
Ga0137396_100038552	3300012918	Vadose Zone Soil	MGRKMRWDGKVTEWTENGCIAWQAISGTPQKMRMKAWNRVAKEGDGTNYSLEVEYVPPYSIFGKIMDLIMIRRSIRKSVRNSTQNLKRILEQS*
Ga0137396_100080527	3300012918	Vadose Zone Soil	MGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRMKAMNRVEMEGDGACYSLDLEYVPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0137396_106431382	3300012918	Vadose Zone Soil	EFVSSASYTSRGKTGVGISAHHLGRVMGRKMEWDGRVTEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGIGTLYSLEVEYMPPYSIFGKIMDLIMIKRSIREMVQHSTQNLKRILEQ*
Ga0137396_108284772	3300012918	Vadose Zone Soil	MGRRMRWDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDETSYSLEVEYVPPYSILGKIMDLVMIRRSIRKSVQNSTQNLKRILE
Ga0137396_108828112	3300012918	Vadose Zone Soil	YTSREKTGVGASAHHSGQVMGKKMELDGRVIEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGDGTRYSLEVEYRPPYSILGRIMDPIMIKGNIRKMVQKFNPELEENPRTILELYYGEKQN*
Ga0137394_114278151	3300012922	Vadose Zone Soil	IMGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQHEGRFSIAI*
Ga0137416_101102113	3300012927	Vadose Zone Soil	MGKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGDGTRYSLEVEYMPPYSTLGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF*
Ga0137416_102502631	3300012927	Vadose Zone Soil	MGRKMRCDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDGTSYSLEVEYVPLYSIFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQA*
Ga0137410_120979521	3300012944	Vadose Zone Soil	MGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRII
Ga0134076_101524741	3300012976	Grasslands Soil	FVSSARYTSKEKTGVGASAHHSGQVMGRKMEWDGRVTEWAEDDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYSLEVEYTPPYSILGRIMDLITIKRNIRKTAQHSTQNLKRILEQF*
Ga0134076_101974691	3300012976	Grasslands Soil	MGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRKIRKTAQHSTQNLKRILEQF*
Ga0134087_100957761	3300012977	Grasslands Soil	NNSIVWQAISGTPQAMRMKAANRVEKEGNGTRYSLEVEYVPPYSILGRIMDLIMIKRNVRKMVQHSTQNLKRVLEQL*
Ga0134081_102941131	3300014150	Grasslands Soil	MEWDGRVIEWAENNSIVWQAISGTPQAMRMKAANRVEKEGNGTRYSLEVEYVPPYSILGRIMDLIMIKRNIRKMVQQSAQN
Ga0134075_100253613	3300014154	Grasslands Soil	MGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
Ga0134075_102548071	3300014154	Grasslands Soil	IEWAENDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYSLEVEYTPPYSILGRIMDLITIKRNIRKTAQHSTQNLKQILEQF*
Ga0134089_100763892	3300015358	Grasslands Soil	MGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGGIMDLIMVKRGIRKMAQHSTQNLKRIIEQH*
Ga0134089_101124082	3300015358	Grasslands Soil	ENDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF*
Ga0134089_104457791	3300015358	Grasslands Soil	HDSCNDWLEFISSARYTSSEKTGVGASAHHSGQIMGRKMEWDGRVVEWAENDSIVWQAISGTPEAMRMKAVNRVEKEGNGTRYSLEVEYMPPYSILGRIMDPIMIKRNIQKMVQHSTQNLKRILEQ*
Ga0066655_100748282	3300018431	Grasslands Soil	MGASANQAGQVLGRKMEWDGRVIEWAENNSIVWQAISGTPQAMRMKAVNRVEKEGDGTRYSLEVEYVPPYSILGRIMDLLMIKRNIRKMVKHSTQNLKRILEQF
Ga0066655_107586821	3300018431	Grasslands Soil	KMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVKKEGDGTRYYLEVEYRPPYSILGRIMDLITIKRNIRKAAQHSTLNLKRILEQF
Ga0066667_101402652	3300018433	Grasslands Soil	MGKKMEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGKGTRYFLEVEYMPPYSILGRIMDLIMIKRNVRKMVQHSTQNLKRVLEQF
Ga0066662_106315183	3300018468	Grasslands Soil	ENDRIVWQAISGTPEAMRMKAVNRVEKEGNGTRYSLEVEYVPPYSILGRIMDPIMIKRNIQKMVQHSTKNLKIILEQ
Ga0209235_10606922	3300026296	Grasslands Soil	MGRKMEWDGRVTEWAENDRIVWQAISGTPEAMRMKAVNSVEKEGEGTRYYLEVEYMPPYSIFGKIMDLIMIKRSIREMVQHSTQNLKRILEQ
Ga0209235_11002752	3300026296	Grasslands Soil	VGASAHHSGQVMGRKMEWDGRVIEWAENDSVVWQAISGTPEAMRMKAANRVKKEGDGTRYSLEVEYRPPYSILGRIMDLITIKRNIRKTAQHSTQNLKRILEQF
Ga0209235_12184412	3300026296	Grasslands Soil	MGRKMEWDGRVIEWAENDSIVWQAISGTPEAMRMKAVNRVEKEGNGTRYSLEVEYVPPYSILGRIMDRIMIKRNIQKMVQHSTQNLKGILE
Ga0209237_11180331	3300026297	Grasslands Soil	NDRIVWQAISGTPEAMRMKAVNSVEKEGEGTRYYLEVEYMPPYSIFGKIMDLIMIKRSIREMVQHSTQNLKRILEQ
Ga0209237_11982481	3300026297	Grasslands Soil	VERVFARIAQHDNCNDWLEFVSSASYSSREKTGLGTTAHHSGQIMGRKMEWDGRVIEWTENNSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGRIMDLIMVKRGIRKM
Ga0209239_10849542	3300026310	Grasslands Soil	MEWDGRVIEWTENYSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYLPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH
Ga0209761_10690032	3300026313	Grasslands Soil	MEWDGRVIEWTENNSIIWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH
Ga0209802_12659271	3300026328	Soil	HHSGQVMGKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGNGTRYSLEVEYVPPYSILGRIMDPIMIKRNIQKMVQHSTKNLKIILEQ
Ga0209158_10286201	3300026333	Soil	QHDSCNDWLEFVSSARYTSKEKTGVGALAHHSGQVMGKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGNGTHYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF
Ga0209377_10270093	3300026334	Soil	MGRKMEWDGRVIEWAENDSIVWRAISGTPKAMKMKALNRVEKEGDGTRYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF
Ga0209377_11777651	3300026334	Soil	GKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGNGTHYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF
Ga0209377_12235971	3300026334	Soil	VGALAHHSGQVMGKKMEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGNGTRYSLEVEYVPPYSILGRIMDPIMIKRNIQKMVQHSTKN
Ga0209057_10194012	3300026342	Soil	MEWDGRVIEWAENNSIVWQAISGTPQAMRMKAANRVEKEGNGTRYSLEVEYVPPYSILGRIMDLIMIKRNIRKMVQQSAQNLKRILEQF
Ga0257181_10640282	3300026499	Soil	HSGQVMGRKMRWDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDGTSYSLEVEYLPPYSVFGKIMDLIMIRRSIRKSVQNSTQNLKRIMEQT
Ga0209806_10354262	3300026529	Soil	MGRKMEWDGRVIEWAENDSIVWRAISGTPKAMKMKALNRVEKEGDGTRYSLEVEYMPPYSILGRIMDPIMIKRNIRKMVQHSTQNLKRILEQ
Ga0209160_12329772	3300026532	Soil	DICNDWLEFVSSARYTSREKTGVGVSAHHWGQVMGRKMEWDGRVIGWAENDSIVWQAISGTPEAMRMKAVNRVEKEENGTRYSLEVEYVPPYSILGRIMDPIMIKRKIQKMVQHSTQNLKRILEQ
Ga0209157_11032562	3300026537	Soil	HSGQVLGRKMEWDGRVIEWAENNSIVWQAISGTPQAMRMKAANRVEKEGNGTRYSLEVEYVPPYSILGRIMDLIMIKRNIRKMVQQSAQNLKRILEQF
Ga0209161_100685411	3300026548	Soil	MEWDGRVIEWAENDSIVWQAMSGTPEAMRMKAVNRVEKEGEGTRYSLELEYMPPYSILGRIMDLIMIKRKLRKMVQHSTQNLKRVLEQL
Ga0209648_103966451	3300026551	Grasslands Soil	MGRTMSWDGKVTEWAENGCIAWEAVSGTPQKMGMKAWNRVAREGDGTSYSLEVEYVPPYSIFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQS
Ga0209588_100024710	3300027671	Vadose Zone Soil	VGTSAHHSGQVMGRKMRWDGKVTEWTENGCIAWEAVSGIPQKMGMKAWNRVAKEGDGTRYSLEVEYVPPYSILGKIMDLVMIRRSIRKSVQNSTQNLKRILEQS
Ga0209180_100716992	3300027846	Vadose Zone Soil	MGRKMQWDGKVTEWTENGCIAWEAVSGTPQKMRMKAWNRVAKEGDGTSYSLEVEYLPPYSVFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQT
Ga0137415_1000183010	3300028536	Vadose Zone Soil	MEWDGRVIEWTENSSIVWEAISGTPQAMRMKAMNRVEMEGDGARYSLDLEYVPPYSIFGRIMDLIMVKRGIRKMAQHSTQNLKRIIEQH
Ga0137415_100474791	3300028536	Vadose Zone Soil	MEWDGRVVEWAENDRIVWQAISGTPEAMRMKAVNRVEKEGDGTRYSLEVEYMPPYSTLGRIMDPIMIKRNIRKMVQHSTQNLKRILEQF
Ga0137415_103575181	3300028536	Vadose Zone Soil	MGRKMRCDGKVTEWTENGCIAWEAVSGTPQKMGMKAWNRVAKEGDGTSYSLEVEYVPLYSIFGKIMDLIMIRRSIRKSVQNSTQNLKRILEQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088639

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences