Metagenome / Metatranscriptome Family F088634

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088634
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	59 residues
Representative Sequence	PGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK
Number of Associated Samples	81
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	99.08 %
% of genes from short scaffolds (< 2000 bps)	93.58 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (55.963 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (43.119 % of family members)
Environment Ontology (ENVO)	Unclassified (67.890 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.12% β-sheet: 30.51% Coil/Unstructured: 42.37%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13419	HAD_2	15.60
PF06197	DUF998	7.34
PF01996	F420_ligase	6.42
PF11799	IMS_C	0.92
PF02945	Endonuclease_7	0.92
PF01546	Peptidase_M20	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3371	Uncharacterized membrane protein	Function unknown [S]	7.34
COG1478	F420-0:Gamma-glutamyl ligase (F420 biosynthesis)	Coenzyme transport and metabolism [H]	6.42

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.82 %
Unclassified	root	N/A	20.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.82 %
Unclassified	root	N/A	20.18 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	55.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.85 %
Unclassified	root	N/A	20.18 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.02 %
Unclassified	root	N/A	20.18 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	14.68 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	6.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17.43 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	14.68 %
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	5.50 %
archaeon 13_1_40CM_4_53_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_4_53_4	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.18 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	14.68 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	12.84 %
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	5.50 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.92 %
archaeon 13_1_40CM_4_53_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_4_53_4	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.18 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.68 %
Actinobacteria bacterium RBG_16_70_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	12.84 %
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	5.50 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.92 %
archaeon 13_1_40CM_4_53_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_4_53_4	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.18 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.68 %
Actinobacteria bacterium RBG_16_70_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	12.84 %
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	5.50 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.92 %
archaeon 13_1_40CM_4_53_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_4_53_4	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.18 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.68 %
Actinobacteria bacterium RBG_16_70_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	12.84 %
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	5.50 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.92 %
archaeon 13_1_40CM_4_53_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_4_53_4	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.18 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	14.68 %
Actinobacteria bacterium RBG_16_70_17	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	12.84 %
archaeon 13_2_20CM_2_52_21	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	5.50 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.92 %
archaeon 13_1_40CM_4_53_4	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_4_53_4	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1053991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	652	Open in IMG/M
3300002562\|JGI25382J37095_10189299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	628	Open in IMG/M
3300002562\|JGI25382J37095_10230036	All Organisms → cellular organisms → Archaea	559	Open in IMG/M
3300002908\|JGI25382J43887_10199465	All Organisms → cellular organisms → Archaea	964	Open in IMG/M
3300002911\|JGI25390J43892_10022807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1508	Open in IMG/M
3300002911\|JGI25390J43892_10069772	All Organisms → cellular organisms → Archaea	811	Open in IMG/M
3300002914\|JGI25617J43924_10126586	All Organisms → cellular organisms → Archaea	896	Open in IMG/M
3300005166\|Ga0066674_10469704	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300005167\|Ga0066672_10958330	Not Available	526	Open in IMG/M
3300005174\|Ga0066680_10138255	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1517	Open in IMG/M
3300005174\|Ga0066680_10209566	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1233	Open in IMG/M
3300005176\|Ga0066679_10141283	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1500	Open in IMG/M
3300005177\|Ga0066690_10781676	Not Available	622	Open in IMG/M
3300005179\|Ga0066684_10510223	All Organisms → cellular organisms → Archaea	807	Open in IMG/M
3300005181\|Ga0066678_10639163	All Organisms → cellular organisms → Archaea	708	Open in IMG/M
3300005447\|Ga0066689_10922241	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300005536\|Ga0070697_100003104	All Organisms → cellular organisms → Archaea	12768	Open in IMG/M
3300005552\|Ga0066701_10385342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	867	Open in IMG/M
3300005553\|Ga0066695_10633071	Not Available	636	Open in IMG/M
3300005554\|Ga0066661_10930062	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	508	Open in IMG/M
3300005556\|Ga0066707_10134273	All Organisms → cellular organisms → Archaea	1555	Open in IMG/M
3300005556\|Ga0066707_10166193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	1407	Open in IMG/M
3300005557\|Ga0066704_10929860	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	537	Open in IMG/M
3300005558\|Ga0066698_10123630	All Organisms → cellular organisms → Archaea	1727	Open in IMG/M
3300005559\|Ga0066700_10801462	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	634	Open in IMG/M
3300005568\|Ga0066703_10572179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	661	Open in IMG/M
3300005569\|Ga0066705_10065119	All Organisms → cellular organisms → Archaea	2087	Open in IMG/M
3300005575\|Ga0066702_10109221	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1592	Open in IMG/M
3300005586\|Ga0066691_10158557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	1305	Open in IMG/M
3300005586\|Ga0066691_10808746	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	552	Open in IMG/M
3300005598\|Ga0066706_10104246	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300005598\|Ga0066706_10705608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	801	Open in IMG/M
3300005598\|Ga0066706_11074279	Not Available	616	Open in IMG/M
3300006034\|Ga0066656_10553447	Not Available	747	Open in IMG/M
3300006794\|Ga0066658_10079557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	1493	Open in IMG/M
3300006794\|Ga0066658_10112287	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1314	Open in IMG/M
3300006797\|Ga0066659_10230774	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1373	Open in IMG/M
3300006797\|Ga0066659_10237689	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1356	Open in IMG/M
3300006797\|Ga0066659_10287056	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1249	Open in IMG/M
3300006797\|Ga0066659_10510177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	965	Open in IMG/M
3300006797\|Ga0066659_11494796	Not Available	565	Open in IMG/M
3300009012\|Ga0066710_103220209	All Organisms → cellular organisms → Archaea	626	Open in IMG/M
3300009012\|Ga0066710_104626769	Not Available	514	Open in IMG/M
3300009038\|Ga0099829_10826482	All Organisms → cellular organisms → Archaea	769	Open in IMG/M
3300009088\|Ga0099830_10282098	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1322	Open in IMG/M
3300009089\|Ga0099828_11968201	Not Available	512	Open in IMG/M
3300009090\|Ga0099827_10097612	All Organisms → cellular organisms → Archaea	2330	Open in IMG/M
3300009137\|Ga0066709_101115883	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1160	Open in IMG/M
3300009137\|Ga0066709_102205625	Not Available	759	Open in IMG/M
3300009137\|Ga0066709_102226379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	755	Open in IMG/M
3300009137\|Ga0066709_103375146	Not Available	580	Open in IMG/M
3300010303\|Ga0134082_10073065	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1336	Open in IMG/M
3300010323\|Ga0134086_10114658	Not Available	962	Open in IMG/M
3300010335\|Ga0134063_10218633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	900	Open in IMG/M
3300011269\|Ga0137392_10252564	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1451	Open in IMG/M
3300011271\|Ga0137393_10611670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	934	Open in IMG/M
3300012096\|Ga0137389_11826289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	504	Open in IMG/M
3300012198\|Ga0137364_11065927	Not Available	609	Open in IMG/M
3300012199\|Ga0137383_10112743	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	1979	Open in IMG/M
3300012199\|Ga0137383_10947542	Not Available	628	Open in IMG/M
3300012204\|Ga0137374_10616005	Not Available	826	Open in IMG/M
3300012206\|Ga0137380_10979214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	724	Open in IMG/M
3300012206\|Ga0137380_11395903	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300012207\|Ga0137381_11624037	All Organisms → cellular organisms → Archaea	537	Open in IMG/M
3300012208\|Ga0137376_11560963	All Organisms → cellular organisms → Archaea	551	Open in IMG/M
3300012209\|Ga0137379_10722186	Not Available	902	Open in IMG/M
3300012209\|Ga0137379_11276830	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	640	Open in IMG/M
3300012211\|Ga0137377_11624316	Not Available	570	Open in IMG/M
3300012211\|Ga0137377_11766929	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	539	Open in IMG/M
3300012211\|Ga0137377_11941922	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300012359\|Ga0137385_11116556	Not Available	648	Open in IMG/M
3300012362\|Ga0137361_11422023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300012363\|Ga0137390_11601355	All Organisms → cellular organisms → Archaea	589	Open in IMG/M
3300012392\|Ga0134043_1026301	Not Available	781	Open in IMG/M
3300012918\|Ga0137396_11147257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300012922\|Ga0137394_10371777	All Organisms → cellular organisms → Archaea	1219	Open in IMG/M
3300012944\|Ga0137410_11711059	All Organisms → cellular organisms → Archaea	553	Open in IMG/M
3300012972\|Ga0134077_10443999	All Organisms → cellular organisms → Archaea	567	Open in IMG/M
3300012975\|Ga0134110_10151696	All Organisms → cellular organisms → Archaea	957	Open in IMG/M
3300012975\|Ga0134110_10446670	Not Available	580	Open in IMG/M
3300014157\|Ga0134078_10022181	All Organisms → cellular organisms → Archaea	2011	Open in IMG/M
3300017656\|Ga0134112_10375312	All Organisms → cellular organisms → Archaea	583	Open in IMG/M
3300018468\|Ga0066662_12649576	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300018468\|Ga0066662_12741579	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_2_20CM_2_52_21	522	Open in IMG/M
3300018468\|Ga0066662_12856883	All Organisms → cellular organisms → Archaea	512	Open in IMG/M
3300021046\|Ga0215015_10231117	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1234	Open in IMG/M
3300021086\|Ga0179596_10486270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_70_17	626	Open in IMG/M
3300021088\|Ga0210404_10036487	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2237	Open in IMG/M
3300026298\|Ga0209236_1255661	All Organisms → cellular organisms → Archaea	575	Open in IMG/M
3300026298\|Ga0209236_1266982	All Organisms → cellular organisms → Archaea	557	Open in IMG/M
3300026309\|Ga0209055_1104925	All Organisms → cellular organisms → Archaea	1117	Open in IMG/M
3300026317\|Ga0209154_1223625	All Organisms → cellular organisms → Archaea	701	Open in IMG/M
3300026317\|Ga0209154_1280355	Not Available	556	Open in IMG/M
3300026325\|Ga0209152_10008281	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3671	Open in IMG/M
3300026328\|Ga0209802_1183417	All Organisms → cellular organisms → Archaea	833	Open in IMG/M
3300026331\|Ga0209267_1085453	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1358	Open in IMG/M
3300026332\|Ga0209803_1056700	All Organisms → cellular organisms → Archaea	1711	Open in IMG/M
3300026332\|Ga0209803_1248091	Not Available	616	Open in IMG/M
3300026333\|Ga0209158_1292667	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	560	Open in IMG/M
3300026335\|Ga0209804_1337338	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	507	Open in IMG/M
3300026532\|Ga0209160_1189541	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300026536\|Ga0209058_1175757	Not Available	950	Open in IMG/M
3300026538\|Ga0209056_10131345	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300026548\|Ga0209161_10122726	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1535	Open in IMG/M
3300027655\|Ga0209388_1118742	All Organisms → cellular organisms → Archaea	755	Open in IMG/M
3300027862\|Ga0209701_10580937	All Organisms → cellular organisms → Archaea	597	Open in IMG/M
3300028536\|Ga0137415_10406274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1166	Open in IMG/M
3300032180\|Ga0307471_101527707	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_40CM_4_53_4	825	Open in IMG/M
3300032180\|Ga0307471_101670477	All Organisms → cellular organisms → Archaea	791	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.08%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	59.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	43.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10539911	3300002557	Grasslands Soil	PDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAK*
JGI25382J37095_101892991	3300002562	Grasslands Soil	WVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAK*
JGI25382J37095_102300361	3300002562	Grasslands Soil	IGYGLKMFLVIGSGNISYHPKEIEEKRGLIQRLFARKPQQPLLEAKQSASK*
JGI25382J43887_101994651	3300002908	Grasslands Soil	PGGVLLHTEGWVDIGYGLKMFLVIGSGNISYNPKQVEEKRGLFQRLFAKKQALLEDKSTVS*
JGI25390J43892_100228072	3300002911	Grasslands Soil	HVALLHGPDAKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQHLFPRKQQPLLEAK*
JGI25390J43892_100697723	3300002911	Grasslands Soil	HVALLHGPDAKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKRGLIQRLFARKPQQPLLEAKQSASK*
JGI25617J43924_101265861	3300002914	Grasslands Soil	DIGYGLKMFLVIGSGNISYHPKEIEQKKGLLQRLFARKPQQPLLEAKESAS*
Ga0066674_104697041	3300005166	Soil	GGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS*
Ga0066672_109583302	3300005167	Soil	LLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK*
Ga0066680_101382551	3300005174	Soil	VALLHGPDARLPGGVLLHTEGWVDIGYGLKMYLVIGSGNITYHPKEIDEKKSLLQRLFARKPQQPLLEAK*
Ga0066680_102095661	3300005174	Soil	IGYGLKMFLVIGSGNISYHPKEIEEKKGLLQSIFPKKQTQPLLEAK*
Ga0066679_101412833	3300005176	Soil	HTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK*
Ga0066690_107816761	3300005177	Soil	GGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK*
Ga0066684_105102233	3300005179	Soil	GGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARNPQQPLLEAKGSTS*
Ga0066678_106391633	3300005181	Soil	KMFLVIGSGNISYHPKEIEEKRGLIQRLFARKPQQPLLEAKQSASK*
Ga0066689_109222412	3300005447	Soil	GGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARKPQQPLLEAKGSTS*
Ga0070697_1000031041	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EGWVDIGYGLKMYLVIGSGNITYHPKQIEEKKSLLQRLFSKKQQPLLEDKGTSS*
Ga0066701_103853422	3300005552	Soil	DARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAK*
Ga0066695_106330711	3300005553	Soil	LPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS*
Ga0066661_109300622	3300005554	Soil	VIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSKS*
Ga0066707_101342731	3300005556	Soil	HGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSP*
Ga0066707_101661933	3300005556	Soil	EGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAK*
Ga0066704_109298601	3300005557	Soil	WVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARNPQQPLLEAKGSTS*
Ga0066698_101236301	3300005558	Soil	IGYGLKMFLVIGSGNISYNPKQIEEKRGLLQRLFAKKQQPLLEAK*
Ga0066700_108014621	3300005559	Soil	WVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK*
Ga0066703_105721791	3300005568	Soil	PGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAK*
Ga0066705_100651191	3300005569	Soil	VIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSQ*
Ga0066702_101092213	3300005575	Soil	HGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK*
Ga0066691_101585571	3300005586	Soil	GGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAK*
Ga0066691_108087462	3300005586	Soil	MFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAKGSAS*
Ga0066706_101042463	3300005598	Soil	VLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFQKKQQQPLLEAK*
Ga0066706_107056081	3300005598	Soil	VDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK*
Ga0066706_110742792	3300005598	Soil	LLHGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSP*
Ga0066656_105534472	3300006034	Soil	PRARLPHGVLLHSEGWVDIGYGLKMFLVIGSSNTTYRPLALEEKRGWRERLLGRKQQPLLEAK*
Ga0066658_100795574	3300006794	Soil	VDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAR*
Ga0066658_101122872	3300006794	Soil	LHGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK*
Ga0066659_102307741	3300006797	Soil	VLLHTEGWVDIGYGLKMYLVIGSGNITYHPKEIDEKKSLLQRLFARKPQQPLLEAK*
Ga0066659_102376892	3300006797	Soil	MFLVIGSGNISYRPKQIEQKKGLLQRLFPKKQQPLLESKETTS*
Ga0066659_102870562	3300006797	Soil	GWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPSLEAK*
Ga0066659_105101771	3300006797	Soil	PGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK*
Ga0066659_114947961	3300006797	Soil	GWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKAQQPLLESKQSTSQ*
Ga0066710_1032202092	3300009012	Grasslands Soil	TGGVLLHSEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKRGLIQRLFARKPQQPLLEAKQSASK
Ga0066710_1046267691	3300009012	Grasslands Soil	PGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSQ
Ga0099829_108264821	3300009038	Vadose Zone Soil	AKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISHHPKEIEEKKGLLQRLFARRPQQPLLEAKQSASK*
Ga0099830_102820981	3300009088	Vadose Zone Soil	IGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK*
Ga0099828_119682011	3300009089	Vadose Zone Soil	HTEGWVDIGYGLKMFLVIGSGNISYNPKQIEEKKGLLQRLFQKKQQQPLLEAK*
Ga0099827_100976124	3300009090	Vadose Zone Soil	DIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK*
Ga0066709_1011158832	3300009137	Grasslands Soil	EGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFQKKQQQPLLEAK*
Ga0066709_1022056252	3300009137	Grasslands Soil	IGYGLKMFLVIGSGNISYHPKQIVEKKGLLQRLFARKQQPLLEAK*
Ga0066709_1022263791	3300009137	Grasslands Soil	HGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEAKKGLLQRLFARKPQQPLLEAK*
Ga0066709_1033751461	3300009137	Grasslands Soil	ALLHGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSP*
Ga0134082_100730653	3300010303	Grasslands Soil	DGPRARLPHGVLLHSEGWVDIGYGLKMFLVIGSSNTTYRPLALEEKRGWRDRLLGRKQQPLLEAK*
Ga0134086_101146581	3300010323	Grasslands Soil	RARLPHGVLLHSEGWVDIGYGLKKFLVIGSSNTTYRPLALEEKRGWRERLLGRKQQPLLEAK*
Ga0134063_102186331	3300010335	Grasslands Soil	GGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQHLFPRKQQPLLEAK*
Ga0137392_102525642	3300011269	Vadose Zone Soil	EAKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIDEKKGLLQRLFPKKQPQPLLEAK*
Ga0137393_106116702	3300011271	Vadose Zone Soil	VLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK*
Ga0137389_118262892	3300012096	Vadose Zone Soil	EGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLRRLFPKKQPQPLLEAK*
Ga0137364_110659271	3300012198	Vadose Zone Soil	GWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARNPQQPLLEAKGSTS*
Ga0137383_101127431	3300012199	Vadose Zone Soil	IGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAKGSAS*
Ga0137383_109475421	3300012199	Vadose Zone Soil	LPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARRPQQPLLEAKQSASK*
Ga0137374_106160052	3300012204	Vadose Zone Soil	RARLPHGVLLHSEGWVDIGYGLKMFLVIGSSNTTYRPLALEEKRGWRDRLLGRKQQPLLEAK*
Ga0137380_109792142	3300012206	Vadose Zone Soil	YGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK*
Ga0137380_113959031	3300012206	Vadose Zone Soil	PDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRSLLQRLFARKPQQPLLEAKGSTS*
Ga0137381_116240372	3300012207	Vadose Zone Soil	PGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRSLLQRLFARKPQQPLLEAKGSTS*
Ga0137376_115609631	3300012208	Vadose Zone Soil	RLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIGEKKGLLQRLLARRPQQPLLEAKQSASK*
Ga0137379_107221861	3300012209	Vadose Zone Soil	LHGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFQKKQQQPLLEAK*
Ga0137379_112768301	3300012209	Vadose Zone Soil	GPDAKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARKPQQPLLEAKGSTS*
Ga0137377_116243161	3300012211	Vadose Zone Soil	DARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARNPQQPLLEAKGSTS*
Ga0137377_117669291	3300012211	Vadose Zone Soil	WVDIGYGLKMFLVIGSGNISYHPKQLEEKRGLLQRLFARKPQQPLLEAKGSTI*
Ga0137377_119419221	3300012211	Vadose Zone Soil	PGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS*
Ga0137385_111165561	3300012359	Vadose Zone Soil	LHGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARRPQQPLLEAKQSESK*
Ga0137361_114220231	3300012362	Vadose Zone Soil	VALLHGPEAKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK*
Ga0137390_116013552	3300012363	Vadose Zone Soil	LHTEGWVDIGYGLKMYLVIGSGNITYHPKEIEEKKGLLQRLFARKPQQPLLEAKQSTSK*
Ga0134043_10263011	3300012392	Grasslands Soil	GPRARLPHGVLLHSEGWVDIGYGLKMILVIGSSNTTYRPLALEEKRGWRDRLLGRKQQPLLEAK*
Ga0137396_111472572	3300012918	Vadose Zone Soil	HTEGWVDIGYGLKMFLVIGSGNISHHPREIEEKKGLLQRLFPKKQPQPLLEAK*
Ga0137394_103717771	3300012922	Vadose Zone Soil	DAQLPGGVLLPTEGWVDIGYGLKMLLVIGSGNISHQPKEIEEKKGLLQRLFARRPQQPLLEAKQSASK*
Ga0137410_117110591	3300012944	Vadose Zone Soil	VLLHTEGWVDIGYGLKMFLVIGSGNISHHPKEIEEKKGLLQRLFARRPQQPLLEAKQSASK*
Ga0134077_104439991	3300012972	Grasslands Soil	HGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARKPQEPLLEAKGSTS*
Ga0134110_101516961	3300012975	Grasslands Soil	IGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSQ*
Ga0134110_104466702	3300012975	Grasslands Soil	LLHSEGWVDIGYGLKMFLVIGSSNTTYRPLALEEKRGWRERLLGRKQQPLLEAK*
Ga0134078_100221812	3300014157	Grasslands Soil	GWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS*
Ga0134112_103753121	3300017656	Grasslands Soil	LLHGPDAKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKRGLIQRLFARKPQQPLLEAKQSASK
Ga0066662_126495763	3300018468	Grasslands Soil	LHGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS
Ga0066662_127415791	3300018468	Grasslands Soil	LHGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSQ
Ga0066662_128568832	3300018468	Grasslands Soil	LPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS
Ga0215015_102311173	3300021046	Soil	LKMYLDIGSGNITYHPKEIDEKKVLLQRLFPKKQPQPLLEAK
Ga0179596_104862701	3300021086	Vadose Zone Soil	GVLLHTEGWVDIGYGLKMYLVIGSGNITYHPKEIEEKKGLLQRLFPKKQPQPLLEAK
Ga0210404_100364874	3300021088	Soil	NTEGWVDIGYGLKMYLVIGSGNITYHPKEIDEKKGLLQRLFARKPQQPLLEAK
Ga0209236_12556611	3300026298	Grasslands Soil	EGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARNPQQPLLEAKGSTS
Ga0209236_12669821	3300026298	Grasslands Soil	EGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARKPQQPLLEAKGSTS
Ga0209055_11049251	3300026309	Soil	LKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS
Ga0209154_12236251	3300026317	Soil	RLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLESKQSTSQ
Ga0209154_12803552	3300026317	Soil	GPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK
Ga0209152_100082816	3300026325	Soil	KMFLVIGSGTISYHPKEIEEKKGLLQRLFARKPQQPLLEAK
Ga0209802_11834171	3300026328	Soil	HGPDARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAKGSTS
Ga0209267_10854531	3300026331	Soil	PGGVLLHTEGWVDIGYGLKMYLVIGSGNITYHPKEIDEKKSLLQRLFARKPQQPLLEAK
Ga0209803_10567001	3300026332	Soil	GVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKRGLIQRLFARKPQQPLLEAKQSASK
Ga0209803_12480911	3300026332	Soil	MFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQQPLLEAKGSGS
Ga0209158_12926671	3300026333	Soil	LVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK
Ga0209804_13373382	3300026335	Soil	LKMFLVIGSGNISYHPKEIEEKKGLLQRLFARKPQQPLLEAK
Ga0209160_11895413	3300026532	Soil	HVALLHGPDSRLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKQFEEKRGLLQRLFARKPQQPLLEAKGSTS
Ga0209058_11757571	3300026536	Soil	LDGPRARLPHGVLLHSEGWVDIGYGLKMFLVIGSSNTTYRPLALEEKRGWRDRLLGRKQQPLLEAK
Ga0209056_101313451	3300026538	Soil	VLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFQKKQQQPLLEAK
Ga0209161_101227261	3300026548	Soil	DARLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFQKKQQQPLLEAK
Ga0209388_11187423	3300027655	Vadose Zone Soil	LLHGPDAKLPGGVLLHTEGWVDIGYGLKMYLVIGSGNITYHPKEIDEKKGLLQRLFARRPQQPLLEAKQSASK
Ga0209701_105809372	3300027862	Vadose Zone Soil	HVALLHGPDAKLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISHHPKEIEEKKGLLQRLFARRPQQPLLEAKQSASK
Ga0137415_104062741	3300028536	Vadose Zone Soil	HTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEAK
Ga0307471_1015277072	3300032180	Hardwood Forest Soil	KLPGGVLLHTEGWVDIGYGLKMFLVIGSGNISYHPKEIEEKKGLLQRLFPKKQPQPLLEA
Ga0307471_1016704771	3300032180	Hardwood Forest Soil	DAKLPGGVLLHTEGWVDIGYGLKMYLVIGSGNITYHPKQIEEKRSLLQRLFSKKQQPLLEDKGTAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088634

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences