Metagenome Family F088616

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088616
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	41 residues
Representative Sequence	FTAIFTVTNTVGTVTNYLDVGAATNFPARYYRVRLVP
Number of Associated Samples	82
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	95.41 %
% of genes from short scaffolds (< 2000 bps)	93.58 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.716 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (12.844 % of family members)
Environment Ontology (ENVO)	Unclassified (26.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.62% β-sheet: 9.23% Coil/Unstructured: 86.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01578	Cytochrom_C_asm	1.83
PF07589	PEP-CTERM	1.83
PF07963	N_methyl	1.83
PF01121	CoaE	1.83
PF02405	MlaE	0.92
PF02482	Ribosomal_S30AE	0.92
PF09699	Paired_CXXCH_1	0.92
PF00150	Cellulase	0.92
PF05893	LuxC	0.92
PF01381	HTH_3	0.92
PF13899	Thioredoxin_7	0.92
PF07804	HipA_C	0.92
PF00690	Cation_ATPase_N	0.92
PF02738	MoCoBD_1	0.92
PF16561	AMPK1_CBM	0.92
PF00171	Aldedh	0.92
PF13540	RCC1_2	0.92
PF00814	TsaD	0.92
PF12833	HTH_18	0.92
PF00128	Alpha-amylase	0.92
PF00589	Phage_integrase	0.92
PF13840	ACT_7	0.92
PF13377	Peripla_BP_3	0.92
PF13385	Laminin_G_3	0.92
PF14559	TPR_19	0.92
PF00535	Glycos_transf_2	0.92
PF11013	DUF2851	0.92
PF09527	ATPase_gene1	0.92
PF00107	ADH_zinc_N	0.92
PF00571	CBS	0.92
PF13474	SnoaL_3	0.92
PF04536	TPM_phosphatase	0.92
PF14498	Glyco_hyd_65N_2	0.92
PF13311	DUF4080	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	1.83
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.83
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.92
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.92
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.92
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.92
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	0.92
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.92
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	0.92
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.92
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.92
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.92
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.92
COG3550	Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module	Signal transduction mechanisms [T]	0.92
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.92
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
All Organisms	root	All Organisms	41.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
cellular organisms	root	All Organisms → cellular organisms	41.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	22.94 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	20.18 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	8.26 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.75 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.34 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.75 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.92 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	0.92 %
unclassified Spartobacteria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.34 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.83 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.92 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.92 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.34 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.92 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.92 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.92 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.92 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	7.34 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.92 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.92 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.92 %
Spartobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	0.92 %
Verrucomicrobia bacterium IMCC26134	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908007\|FWIRElOz_GKZ9IRQ01EGG36	Not Available	558	Open in IMG/M
2170459010\|GIO7OMY01A11BA	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300001213\|JGIcombinedJ13530_103317244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300001213\|JGIcombinedJ13530_108534041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	851	Open in IMG/M
3300004012\|Ga0055464_10138571	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005446\|Ga0066686_10495812	Not Available	832	Open in IMG/M
3300005829\|Ga0074479_10069596	Not Available	1331	Open in IMG/M
3300006795\|Ga0075520_1082170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1488	Open in IMG/M
3300006796\|Ga0066665_11050892	All Organisms → cellular organisms → Bacteria → FCB group	622	Open in IMG/M
3300006796\|Ga0066665_11267588	Not Available	564	Open in IMG/M
3300006871\|Ga0075434_102597193	Not Available	507	Open in IMG/M
3300006904\|Ga0075424_102578844	Not Available	532	Open in IMG/M
3300009012\|Ga0066710_103709372	All Organisms → cellular organisms → Bacteria → PVC group	574	Open in IMG/M
3300009012\|Ga0066710_104435386	Not Available	524	Open in IMG/M
3300009090\|Ga0099827_11950212	Not Available	511	Open in IMG/M
3300009137\|Ga0066709_100894118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1294	Open in IMG/M
3300009137\|Ga0066709_100895961	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300009137\|Ga0066709_103298828	Not Available	587	Open in IMG/M
3300009137\|Ga0066709_103603403	Not Available	562	Open in IMG/M
3300009143\|Ga0099792_10366226	Not Available	873	Open in IMG/M
3300009143\|Ga0099792_10831183	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	607	Open in IMG/M
3300009629\|Ga0116119_1137207	Not Available	611	Open in IMG/M
3300009634\|Ga0116124_1100285	Not Available	819	Open in IMG/M
3300009641\|Ga0116120_1007609	All Organisms → cellular organisms → Bacteria	4748	Open in IMG/M
3300010379\|Ga0136449_103749232	Not Available	573	Open in IMG/M
3300012202\|Ga0137363_10946299	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012205\|Ga0137362_10811426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300012205\|Ga0137362_11127924	Not Available	666	Open in IMG/M
3300012207\|Ga0137381_11192976	Not Available	654	Open in IMG/M
3300012361\|Ga0137360_10437385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1107	Open in IMG/M
3300012582\|Ga0137358_10668802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium IMCC26134	695	Open in IMG/M
3300012923\|Ga0137359_10749150	Not Available	849	Open in IMG/M
3300014153\|Ga0181527_1366771	Not Available	555	Open in IMG/M
3300014155\|Ga0181524_10367840	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300014158\|Ga0181521_10577745	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300014159\|Ga0181530_10415517	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300014165\|Ga0181523_10638815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300014490\|Ga0182010_10737086	Not Available	556	Open in IMG/M
3300014494\|Ga0182017_10649246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	641	Open in IMG/M
3300014498\|Ga0182019_10408910	Not Available	926	Open in IMG/M
3300014498\|Ga0182019_11034303	Not Available	598	Open in IMG/M
3300014498\|Ga0182019_11074327	Not Available	587	Open in IMG/M
3300014498\|Ga0182019_11343943	Not Available	529	Open in IMG/M
3300014502\|Ga0182021_11210400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300014502\|Ga0182021_11721660	Not Available	755	Open in IMG/M
3300014502\|Ga0182021_12159411	Not Available	670	Open in IMG/M
3300014502\|Ga0182021_12619832	Not Available	606	Open in IMG/M
3300014502\|Ga0182021_12795877	Not Available	586	Open in IMG/M
3300014838\|Ga0182030_10332727	Not Available	1641	Open in IMG/M
3300015264\|Ga0137403_11144393	Not Available	624	Open in IMG/M
3300017656\|Ga0134112_10281844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	665	Open in IMG/M
3300017966\|Ga0187776_10209441	Not Available	1229	Open in IMG/M
3300018016\|Ga0187880_1410411	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300018017\|Ga0187872_10070004	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300018019\|Ga0187874_10042847	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300018021\|Ga0187882_1186603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	824	Open in IMG/M
3300018022\|Ga0187864_10302393	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300018034\|Ga0187863_10096734	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300018038\|Ga0187855_10044021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2802	Open in IMG/M
3300018042\|Ga0187871_10622328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	599	Open in IMG/M
3300018060\|Ga0187765_11237727	Not Available	525	Open in IMG/M
3300018088\|Ga0187771_11718699	Not Available	533	Open in IMG/M
3300018090\|Ga0187770_11178444	Not Available	619	Open in IMG/M
3300018433\|Ga0066667_12088256	Not Available	524	Open in IMG/M
3300019999\|Ga0193718_1013614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1796	Open in IMG/M
3300021402\|Ga0210385_11270878	Not Available	564	Open in IMG/M
3300021432\|Ga0210384_10400527	Not Available	1236	Open in IMG/M
3300022650\|Ga0236339_1261780	Not Available	533	Open in IMG/M
(restricted) 3300023177\|Ga0233423_10340804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → unclassified Spartobacteria → Spartobacteria bacterium	638	Open in IMG/M
3300024323\|Ga0247666_1038377	Not Available	987	Open in IMG/M
3300025812\|Ga0208457_1027020	Not Available	1375	Open in IMG/M
3300027896\|Ga0209777_10987941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300028800\|Ga0265338_10518814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	837	Open in IMG/M
3300028800\|Ga0265338_10539285	Not Available	818	Open in IMG/M
3300028800\|Ga0265338_10645552	Not Available	734	Open in IMG/M
3300030007\|Ga0311338_11320878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	676	Open in IMG/M
3300030399\|Ga0311353_10641017	Not Available	924	Open in IMG/M
3300030617\|Ga0311356_11814142	Not Available	543	Open in IMG/M
3300030618\|Ga0311354_10767722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	914	Open in IMG/M
3300031236\|Ga0302324_100174950	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300031240\|Ga0265320_10462680	Not Available	560	Open in IMG/M
3300031720\|Ga0307469_11019714	Not Available	774	Open in IMG/M
3300031720\|Ga0307469_11843375	Not Available	585	Open in IMG/M
3300032018\|Ga0315272_10687343	Not Available	520	Open in IMG/M
3300032177\|Ga0315276_10426605	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300032177\|Ga0315276_11896368	Not Available	611	Open in IMG/M
3300032180\|Ga0307471_103330551	Not Available	569	Open in IMG/M
3300032180\|Ga0307471_103632225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300032261\|Ga0306920_101538851	Not Available	948	Open in IMG/M
3300032397\|Ga0315287_12263835	Not Available	591	Open in IMG/M
3300032770\|Ga0335085_10165725	Not Available	2751	Open in IMG/M
3300032770\|Ga0335085_11720433	Not Available	645	Open in IMG/M
3300032782\|Ga0335082_10558123	Not Available	1007	Open in IMG/M
3300032783\|Ga0335079_10488300	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300032783\|Ga0335079_11699729	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300032805\|Ga0335078_10983188	All Organisms → cellular organisms → Bacteria → PVC group	1002	Open in IMG/M
3300032805\|Ga0335078_12408176	Not Available	547	Open in IMG/M
3300032892\|Ga0335081_10866556	Not Available	1070	Open in IMG/M
3300032892\|Ga0335081_11034663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	953	Open in IMG/M
3300032892\|Ga0335081_12081009	Not Available	602	Open in IMG/M
3300032955\|Ga0335076_11034198	Not Available	704	Open in IMG/M
3300033004\|Ga0335084_11638466	Not Available	634	Open in IMG/M
3300033158\|Ga0335077_10810799	Not Available	952	Open in IMG/M
3300033158\|Ga0335077_11386123	All Organisms → cellular organisms → Bacteria → PVC group	678	Open in IMG/M
3300033805\|Ga0314864_0073935	Not Available	806	Open in IMG/M
3300033982\|Ga0371487_0510712	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300034128\|Ga0370490_0325016	Not Available	512	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.50%
Host-Associated	Host-Associated	5.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.81%
Aquatic	Environmental → Aquatic	25.69%
Plants	Host-Associated → Plants	5.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.30%
Freshwater	Environmental → Aquatic → Freshwater	22.02%
Peat	Environmental → Terrestrial → Peat	5.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.50%
Marine	Environmental → Aquatic → Marine	2.75%
Sediment	Environmental → Aquatic → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	29.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.60%
Lake	Environmental → Aquatic → Freshwater → Lake	5.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.50%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.93%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	10.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.59%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.92%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.92%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908007	Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004012	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022650	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W3	Environmental	Open in IMG/M
3300023177 (restricted)	Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MG	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRElOz_10161120	2124908007	Soil	NGFAAIFTVTNTTGTVTNYLDPNAATNFPSLYYRVRLVP
F62_01272590	2170459010	Grass Soil	NSGFTDIFVVTSSVATGTTTNYLDVGGATNSPVRYYRVRLVP
JGIcombinedJ13530_1033172442	3300001213	Wetland	RGNSVTNITTEIFAVTNTTGSVTNYLDVGAATNAPAEFYRVGLVP*
JGIcombinedJ13530_1085340411	3300001213	Wetland	SADIGGGYADIFTVTNTTGTVTNYLDLGGATNSPARFYRVRLVP*
Ga0055464_101385711	3300004012	Natural And Restored Wetlands	GTGDGSYSNNFADLWIVTNTVGTVTNYTDESASSVARRYYRVRLVP*
Ga0066686_104958122	3300005446	Soil	NGSFSNNFAAIFTVTNTVGSTTNYLDAGAATNVPAYYYRVRLVP*
Ga0074479_100695962	3300005829	Sediment (Intertidal)	SYSNDFATIFTATNTAAGMTNSVDLGAATNSPAFYYRVRLVP*
Ga0075520_10821701	3300006795	Arctic Peat Soil	NFADVFTVTNTVGNVTNYLDLGAATNGSVRYYRVRLVP*
Ga0066665_110508921	3300006796	Soil	NNFAAIFTVTNTVGTTTNYLDIGAATNVPAFYYRVRLVP*
Ga0066665_112675881	3300006796	Soil	RSAGANGSLSNNFASIFFVTNTVGTTTNYLDFGAATNAPGRYYRIRLVP*
Ga0075434_1025971931	3300006871	Populus Rhizosphere	AIFIATNTGAATTTNYLDVGAATNVPAFYYRVRLVP*
Ga0075424_1025788442	3300006904	Populus Rhizosphere	SFATNNFTAIFTVTNTAAGTTNYLDINAATNVPAFYYRVRLVP*
Ga0066710_1037093721	3300009012	Grasslands Soil	TNNYTNIFTVTGTTGTVTNYLDAGGATNFPARYYRVRMP
Ga0066710_1044353861	3300009012	Grasslands Soil	SFATNAFAAIFTATNIVGTTTNYLNVGAATNVPAFYYRVRLVP
Ga0099827_119502121	3300009090	Vadose Zone Soil	NFTDIFTVTNTVGVVTNYLDLGAATNAPARYYRIRVVP*
Ga0066709_1008941183	3300009137	Grasslands Soil	VANVSFNTNSFVTIFTVTNTIGTVTNYVDIGAATNSPSRYYRVRLVP*
Ga0066709_1008959613	3300009137	Grasslands Soil	GSLSNNFASIFSVTNTVGTTTHYLDLGAATNAPGRYYRIRLVS*
Ga0066709_1032988281	3300009137	Grasslands Soil	NAFAAIFTVTNTVGTTTNFLDLGAATNVPAFYYRVRLVP*
Ga0066709_1036034032	3300009137	Grasslands Soil	AAIFTVTDTADTTTNYLDVGAATNVPAFYYRVRLVP*
Ga0099792_103662261	3300009143	Vadose Zone Soil	IFSVTNTSGTTTNYLDVGAATNVPAFYYRVRLVP*
Ga0099792_108311832	3300009143	Vadose Zone Soil	FTAIFTVTNTVGTVTNYLDVGAATNFPARYYRVRLVP*
Ga0116119_11372072	3300009629	Peatland	TNNFTDLFIVTNTVGTVSNYLDAGALTNAPSRFYRVRLVP*
Ga0116124_11002851	3300009634	Peatland	NNFAGIFTVTNTTGPLTNYLDVGAATNIPSRFYRVRLVP*
Ga0116120_10076091	3300009641	Peatland	GGFTNDFSDIFTVTNTFGSVTNYLDLGAATNAPARFYRVRLVP*
Ga0136449_1037492322	3300010379	Peatlands Soil	VDLFTVTNTVGPTTNYLDVGGATNSPTGYYRIRLVP*
Ga0137363_109462991	3300012202	Vadose Zone Soil	NNFANIFIVTNTVTTATNYTDVGAATNFPSRYYRVRLVP*
Ga0137362_108114262	3300012205	Vadose Zone Soil	NGFTAIFTVTNTVGTVNNYFDIGAATNSPARYYRVRLVP*
Ga0137362_111279242	3300012205	Vadose Zone Soil	TDLFIVTNTMDAITNYLDVGAATNFPARYYRVRLVP*
Ga0137381_111929762	3300012207	Vadose Zone Soil	GSFSNDFTAIFVVTNTVGTATNYLDASAATNIPAFYYRVRLVP*
Ga0137360_104373851	3300012361	Vadose Zone Soil	DIFVVPNTTGSATNYLDAGAATNSAARYYRVRLVQ*
Ga0137358_106688022	3300012582	Vadose Zone Soil	GSYETNDFTDIFTVTNTLGSVTNYLDPGAATNFPARYYRVRLVP*
Ga0137398_111257981	3300012683	Vadose Zone Soil	DGSLDTNFIDIFTVTGTTENTTNFLDVGAATNIPASYYRVRVPQ*
Ga0137359_107491501	3300012923	Vadose Zone Soil	NNFTDIFIVTNTVATITNYLDLGAATNSPSRFYRVRLVP*
Ga0137359_116472501	3300012923	Vadose Zone Soil	GNANFATNNFTDLFIVTNTVGTITNYLDAGATTNIPSYYYRVRLVQ*
Ga0181527_13667711	3300014153	Bog	TGIFSVTNTVTTTTNYLDKGVIGSTPSRYYRVRLVP*
Ga0181524_103678401	3300014155	Bog	DIFIVTNNTTVGTVTNYLDIGAATNAPARFYRARLVP*
Ga0181521_105777452	3300014158	Bog	NNFADLFTVTNTVGTVTNYTDIGAATNTSSRYYRVRRVP*
Ga0181530_104155171	3300014159	Bog	NFTDIFTVTNTVSTVTNYLDVGTGMNFPARYYRVRLLP*
Ga0181523_106388152	3300014165	Bog	GSYNTNGFVDIFTVTNTVGTVTNYLDAGGATNVPARFYRVRVVP*
Ga0182010_107370861	3300014490	Fen	DGSYSTNDFADIFTVTNTTGLLTNYLDVGAAINTPSRYYRVRLIP*
Ga0182017_106492462	3300014494	Fen	LTITITNTTGTTTSYLDLDAATNAPAFYYRVRLAL*
Ga0182019_104089102	3300014498	Fen	DIFTVTNTVGSVTNYLDPQAATNSSRFYRMRLAP*
Ga0182019_110343031	3300014498	Fen	AMAGSTYDTNNYADIFIVTNTVAPTTNYIDVGAATNAPTRYYRVRLIP*
Ga0182019_110743272	3300014498	Fen	YSTNNFADIFTVTNTVGTTTNYTDVGGATNKPARYYRIRLVP*
Ga0182019_113439431	3300014498	Fen	YATNGFVDIFGVTNTVGTTTNYLDVGGAIGAPTRYYRVRLVP*
Ga0182021_112104002	3300014502	Fen	YGTNNFIDIFTVTNTVGSVTNYLDRGAVTNFPSRFYRVRLVP*
Ga0182021_117216601	3300014502	Fen	ADLVIITNTVGTVTNAVDVGGATSSATRYYRVRLVP*
Ga0182021_121594112	3300014502	Fen	VGRERPVAFTDIFTVKNTVGTVTNYLDAGAATNSPSRFYRVRLVP*
Ga0182021_126198321	3300014502	Fen	GAGVSYNTNNFSAIFTVTNTVGTVTNYLDTGAATNKPARYYRVRLVP*
Ga0182021_127958771	3300014502	Fen	GGSYATNGFADLVIITNTVGTVTNGVDEGGATSAPSRFYRVRLVP*
Ga0182030_103327271	3300014838	Bog	NTTNGYADIFVVTNNTTPGVVTNYLDLGAATNAPSRFYRARLAP*
Ga0137403_111443931	3300015264	Vadose Zone Soil	SYATNGFMEVFIVTNTIGTATNFLDVGGATNKPARYYRVRLVP*
Ga0134112_102818442	3300017656	Grasslands Soil	VRHRFSNHFAAIFTVTNTVGTTTNFLDAGAATNVPAFDYRIRLVP
Ga0187776_102094411	3300017966	Tropical Peatland	TLFIVTNTVGNTTNYLDVGAIGGNPARYYRVRLVP
Ga0187880_14104112	3300018016	Peatland	DIFTVTNTTGVITNYLDSGVMTNAPVRYYRVRVVP
Ga0187872_100700043	3300018017	Peatland	GDGMGNYSTNNFADLFTVTNTVGTVTNYTDTGAATNTPSHYYRVRLVP
Ga0187874_100428474	3300018019	Peatland	ANGSYSTNNFTDLFIVTNTVGTVSNYLDAGALTNAPSRFYRVRLVP
Ga0187882_11866032	3300018021	Peatland	NTNNFADIFTVTGATDTVTNYLDGGAATNSSSRYYRVRLVP
Ga0187864_103023931	3300018022	Peatland	FTAIFAVTNTVGSVTNYLDIGGATNTPSRYYRVRLVQ
Ga0187863_100967345	3300018034	Peatland	FADIFVVTNTTGSATNYLDRGAATNAPASYYRVRLVP
Ga0187855_100440214	3300018038	Peatland	TNFPTGYADIFIVTNTTGTVTNYTDPGAVTNGPSRYYRVRLVP
Ga0187871_106223281	3300018042	Peatland	NALQVMTNFPSGYSDIFTVTNTSGTVTNYLDAGAVTNSPTRYYRVRLVP
Ga0187765_112377272	3300018060	Tropical Peatland	VDLFTVTNTAGPFTNYLDVGASTNALLRFYRVRLVP
Ga0187771_117186991	3300018088	Tropical Peatland	NSFTDIFTVTNTVGSVTNYLDVGGATNQPARFYRVRLVP
Ga0187770_111784441	3300018090	Tropical Peatland	ANGGYSTNYTDIFIVTNTVAITTNYLDVGAATNTPARYYRVRLVP
Ga0066667_120882562	3300018433	Grasslands Soil	ADIFTVTNNFISITNYLDVGAATNVPAFYYRVRLVP
Ga0193718_10136143	3300019999	Soil	IDIFVVTNNSAAGTVTNYLDVGGATNVPARYYRVRLVP
Ga0210385_112708781	3300021402	Soil	GSYNTNNFAAIFTVTNTTGSTTNYLDVGGATNFPARYYRVRLVP
Ga0210384_104005273	3300021432	Soil	DSADDGFADIFTITNTVGTVTNYLDVGVATNVPSRYYRVRLVP
Ga0236339_12617801	3300022650	Freshwater	TNGFADLVIITNTVGTVTNGTDVGGATSSATRYYRVRLVP
(restricted) Ga0233423_103408042	3300023177	Freshwater	GAFTAIFTVTNTTGAVTNFLDIGVATNTSSRYYRVRLVP
Ga0247666_10383771	3300024323	Soil	AIFTVTNAVGTVTNYLDSGGATNFPARYYRVRLIP
Ga0208457_10270203	3300025812	Peatland	DAGGSFTNDFADLFTVTNTVGSVTNYLDSGGATNSPARFYRVRLVP
Ga0209777_109879412	3300027896	Freshwater Lake Sediment	MNANAFIVTNTPDSFTNDLDVGAATNLPSRYYRIRL
Ga0265338_105188141	3300028800	Rhizosphere	DIFVVTNTVTAGSVTNYIDPGAVTNSPSRYYRVRWAP
Ga0265338_105392852	3300028800	Rhizosphere	SNSFADIFIVTNTVGAETNYLDVGVATNFPSRLYRVRLVP
Ga0265338_106455522	3300028800	Rhizosphere	GFTDIFVVTNNAIPGTVTNFLDVGGATNKPARYYRVRLVP
Ga0311338_113208781	3300030007	Palsa	GAWNGTYSTNGFADIFTVTNTVGTVTNYLDLGAATNGPTRYYRVRLVP
Ga0311353_106410171	3300030399	Palsa	GDGSYSTNNFADIFTVTNTVGPLTNYLDAGAATNIPPSRYYRVRLVP
Ga0311356_118141423	3300030617	Palsa	NFADIFTVTNTVGPLTNYLDAGAATNIPPSRYYRVRLVP
Ga0311354_107677221	3300030618	Palsa	GFADIFTVTNTVGTVTNYLDLGAATNGPTRYYRVRLVP
Ga0302324_1001749503	3300031236	Palsa	TPIFTVTNTVGSVTNYLDIGAATNNTRYYRVRLVP
Ga0265320_104626802	3300031240	Rhizosphere	TNYADVFTVTNTTGTLTNYLYDGAATNRPCRFYRVRLVP
Ga0307469_110197142	3300031720	Hardwood Forest Soil	TDIFIVTNTIGSVTNYLDVGAATNFPSLFYRVRLVQ
Ga0307469_118433751	3300031720	Hardwood Forest Soil	DIFTVTNTDGSVTNFPDPDAATNFPSLYYRVRLVP
Ga0315272_106873432	3300032018	Sediment	TNNFADIFTVTNTVGGVTNFPDPEAATNSPSLYYRVRLVP
Ga0315276_104266052	3300032177	Sediment	SNNFAAIFTVTNTVGSVTNYLDMSAATNVPSQYYRIRLVP
Ga0315276_118963681	3300032177	Sediment	FADIFTVTNTVGLVTNYLDAGATTNFPSRFYRVRLVP
Ga0307471_1033305512	3300032180	Hardwood Forest Soil	PGSFATNNFAAIFTVTNTVGTSTNYLDTGAATNFPAYYYRVRLVP
Ga0307471_1036322251	3300032180	Hardwood Forest Soil	DVNGSYSNNFLAIFSVTNTTSTLTNYLDLGAATNLPSRYYRVRLVP
Ga0306920_1015388512	3300032261	Soil	GLSDNFSDIFTATNLVSAVTNYLDVGAATNFPARYYRVRLLP
Ga0315287_122638352	3300032397	Sediment	AGNYATNFTDIFIVTNTVGTVTNFLDVGAATNAPAGYYRIRLVP
Ga0335085_101657255	3300032770	Soil	VGTGGGYGTNNFVAIFTVTNTVGAITNYLDVGAATNVPSLYYRVRLVP
Ga0335085_117204332	3300032770	Soil	AGGSFSNNFAAIFTVTNTVGPTTNYLDVGAATNNPARYYRVRLVP
Ga0335082_105581232	3300032782	Soil	NFATMFIVTNTVGTVTNYLDVGGATNVPSRFYRVRLVP
Ga0335079_104883001	3300032783	Soil	TNNFAAIFTLTNAVGTSTNYLDVGGATNKPSLYYRVRLVP
Ga0335079_116997292	3300032783	Soil	LTNGFTDIFTVTNTLGSVTNYLDPGAATNFPSRFYRIRLVP
Ga0335078_109831881	3300032805	Soil	DTNNFADIFTVTNTTGMVTNYLDSGAISNGAVRYYRVRIVP
Ga0335078_124081761	3300032805	Soil	SNNFYDIFTVTNLVSTVTNYLDVGAATNFPSRYYRVRLLP
Ga0335081_108665562	3300032892	Soil	GFTDIFTVTNTTGSVTNYLDPGAATNFPYRFYRIRLVP
Ga0335081_110346631	3300032892	Soil	VDGSYTNNFADIFVVNSSVNVITNYLDIGAATNSPTRYYRVRLVP
Ga0335081_120810091	3300032892	Soil	YATNSFVDVFTVTNTTGSVTNYLDTGGATNQPARYYRVRLVP
Ga0335076_110341982	3300032955	Soil	FADLFTVTNTVGPCTNYLDLGALTNTVLRFYRVRLVP
Ga0335084_116384661	3300033004	Soil	NNFAAIFTVTNTVGTATNYLEVGAATNFPSRYYRIRLVP
Ga0335077_108107992	3300033158	Soil	TAIFTATNTVGTTTNYLDVGAAANRLTCYYRVRLVP
Ga0335077_113861233	3300033158	Soil	FSADNFADIFTVTNTVGTTTNYLDVGAATNFPARFYRIRLVP
Ga0314864_0073935_674_787	3300033805	Peatland	MTDLFIVTNTIGTVTNYVDVGGATNGPARYYRVRLVP
Ga0371487_0510712_381_503	3300033982	Peat Soil	TNGFADVFIVTNTVGTATNYLDTGAATNSSPRFYRVRLLP
Ga0370490_0325016_381_512	3300034128	Untreated Peat Soil	GFYTNLFGDIFIVTNTAGSAANYLDVGATTNVPSRFYRVRLVP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters