Metagenome / Metatranscriptome Family F088615

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088615
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	58 residues
Representative Sequence	LKLVACVLLLSGFFIVLAALVLLTSLGQRSAFVGAGFGVEILGLALLTQSYRSIRKEHR
Number of Associated Samples	80
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.87 %
% of genes near scaffold ends (potentially truncated)	32.11 %
% of genes from short scaffolds (< 2000 bps)	71.56 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.633 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (21.101 % of family members)
Environment Ontology (ENVO)	Unclassified (62.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (44.954 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.07% β-sheet: 0.00% Coil/Unstructured: 37.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF05221	AdoHcyase	35.78
PF00909	Ammonium_transp	34.86
PF00670	AdoHcyase_NAD	6.42
PF04851	ResIII	1.83
PF00069	Pkinase	1.83
PF02449	Glyco_hydro_42	0.92
PF13650	Asp_protease_2	0.92
PF07642	BBP2	0.92
PF02321	OEP	0.92
PF12158	DUF3592	0.92
PF07676	PD40	0.92
PF00578	AhpC-TSA	0.92
PF02518	HATPase_c	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	42.20
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	34.86
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.34
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.83
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.63 %
Unclassified	root	N/A	37.61 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.20 %
Unclassified	root	N/A	37.61 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	42.20 %
Unclassified	root	N/A	37.61 %
Prasinodermophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta	0.92 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	42.20 %
Unclassified	root	N/A	37.61 %
Prasinodermophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta → Prasinodermophyceae	0.92 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	41.28 %
Unclassified	root	N/A	37.61 %
Prasinodermales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta → Prasinodermophyceae → Prasinodermales	0.92 %
Trebouxiophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	11.01 %
Prasinodermaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta → Prasinodermophyceae → Prasinodermales → Prasinodermaceae	0.92 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.92 %
Chlorellales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2.75 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.92 %
Prasinoderma	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta → Prasinodermophyceae → Prasinodermales → Prasinodermaceae → Prasinoderma	0.92 %
Chlorellaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2.75 %
Auxenochlorella	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Auxenochlorella	0.92 %
Prasinoderma coloniale	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta → Prasinodermophyceae → Prasinodermales → Prasinodermaceae → Prasinoderma → Prasinoderma coloniale	0.92 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2.75 %
Auxenochlorella protothecoides	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Auxenochlorella → Auxenochlorella protothecoides	0.92 %
Prasinoderma coloniale	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta → Prasinodermophyceae → Prasinodermales → Prasinodermaceae → Prasinoderma → Prasinoderma coloniale	0.92 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002162\|JGI24139J26690_1093323	Not Available	539	Open in IMG/M
3300003369\|JGI24140J50213_10092016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1016	Open in IMG/M
3300004092\|Ga0062389_103480930	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300006795\|Ga0075520_1197848	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300006795\|Ga0075520_1250299	Not Available	737	Open in IMG/M
3300009630\|Ga0116114_1035022	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Chlorellales → Chlorellaceae → Auxenochlorella → Auxenochlorella protothecoides	1458	Open in IMG/M
3300009640\|Ga0116126_1050092	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1642	Open in IMG/M
3300010341\|Ga0074045_10592031	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300014151\|Ga0181539_1125045	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1051	Open in IMG/M
3300014155\|Ga0181524_10470369	Not Available	538	Open in IMG/M
3300014156\|Ga0181518_10487899	Not Available	585	Open in IMG/M
3300014160\|Ga0181517_10009275	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	7884	Open in IMG/M
3300014160\|Ga0181517_10071862	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2066	Open in IMG/M
3300014160\|Ga0181517_10112134	Not Available	1574	Open in IMG/M
3300014160\|Ga0181517_10147559	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1324	Open in IMG/M
3300014160\|Ga0181517_10151514	Not Available	1302	Open in IMG/M
3300014160\|Ga0181517_10420135	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	684	Open in IMG/M
3300014161\|Ga0181529_10002710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20859	Open in IMG/M
3300014161\|Ga0181529_10176922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1273	Open in IMG/M
3300014164\|Ga0181532_10605658	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300014167\|Ga0181528_10368443	Not Available	781	Open in IMG/M
3300014199\|Ga0181535_10403321	Not Available	800	Open in IMG/M
3300014200\|Ga0181526_10541835	Not Available	736	Open in IMG/M
3300014491\|Ga0182014_10061162	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2494	Open in IMG/M
3300014492\|Ga0182013_10055063	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2980	Open in IMG/M
3300014492\|Ga0182013_10134494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1589	Open in IMG/M
3300014492\|Ga0182013_10437658	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300014494\|Ga0182017_10019926	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4644	Open in IMG/M
3300014496\|Ga0182011_10006144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	9365	Open in IMG/M
3300014496\|Ga0182011_10619017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	688	Open in IMG/M
3300014499\|Ga0182012_10153215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1661	Open in IMG/M
3300014658\|Ga0181519_10083555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2080	Open in IMG/M
3300014839\|Ga0182027_10062578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4601	Open in IMG/M
3300014839\|Ga0182027_12201146	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300016701\|Ga0181509_1187727	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	654	Open in IMG/M
3300017931\|Ga0187877_1176502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	847	Open in IMG/M
3300017935\|Ga0187848_10000426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	38924	Open in IMG/M
3300017935\|Ga0187848_10221320	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300017938\|Ga0187854_10124481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1188	Open in IMG/M
3300017940\|Ga0187853_10287528	Not Available	746	Open in IMG/M
3300017946\|Ga0187879_10818424	Not Available	520	Open in IMG/M
3300017948\|Ga0187847_10011780	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5724	Open in IMG/M
3300017948\|Ga0187847_10352869	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300017988\|Ga0181520_10020716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	7514	Open in IMG/M
3300017988\|Ga0181520_10025058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	6544	Open in IMG/M
3300017988\|Ga0181520_10206400	Not Available	1539	Open in IMG/M
3300017988\|Ga0181520_10251816	Not Available	1350	Open in IMG/M
3300017988\|Ga0181520_10686420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	701	Open in IMG/M
3300017988\|Ga0181520_10939808	Not Available	575	Open in IMG/M
3300018008\|Ga0187888_1278314	Not Available	647	Open in IMG/M
3300018014\|Ga0187860_1138711	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300018019\|Ga0187874_10375417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	574	Open in IMG/M
3300018023\|Ga0187889_10069592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1815	Open in IMG/M
3300018033\|Ga0187867_10495362	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300018035\|Ga0187875_10659663	Not Available	550	Open in IMG/M
3300018043\|Ga0187887_10104735	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1703	Open in IMG/M
3300018043\|Ga0187887_10910286	Not Available	521	Open in IMG/M
3300018044\|Ga0187890_10180547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1201	Open in IMG/M
3300018046\|Ga0187851_10272051	Not Available	988	Open in IMG/M
3300018046\|Ga0187851_10634216	Not Available	603	Open in IMG/M
3300019082\|Ga0187852_1391843	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300019788\|Ga0182028_1052676	Not Available	621	Open in IMG/M
3300019788\|Ga0182028_1246133	Not Available	522	Open in IMG/M
3300022524\|Ga0224534_1093989	Not Available	526	Open in IMG/M
3300022555\|Ga0212088_10009856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15470	Open in IMG/M
3300022849\|Ga0224531_1000016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	117658	Open in IMG/M
3300023068\|Ga0224554_1000006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	200914	Open in IMG/M
3300023068\|Ga0224554_1052363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1058	Open in IMG/M
3300023075\|Ga0224520_1082014	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300025506\|Ga0208937_1030927	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1305	Open in IMG/M
3300026502\|Ga0255350_1050470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	991	Open in IMG/M
3300028765\|Ga0302198_10195823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1004	Open in IMG/M
3300028765\|Ga0302198_10314627	Not Available	733	Open in IMG/M
3300028785\|Ga0302201_10031017	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300028813\|Ga0302157_10693224	Not Available	519	Open in IMG/M
3300028873\|Ga0302197_10268556	Not Available	776	Open in IMG/M
3300029907\|Ga0311329_10328308	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Prasinodermophyta → Prasinodermophyceae → Prasinodermales → Prasinodermaceae → Prasinoderma → Prasinoderma coloniale	1098	Open in IMG/M
3300029911\|Ga0311361_10106881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3932	Open in IMG/M
3300029951\|Ga0311371_11601774	Not Available	717	Open in IMG/M
3300029951\|Ga0311371_11912644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	634	Open in IMG/M
3300029992\|Ga0302276_10094078	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1601	Open in IMG/M
3300029992\|Ga0302276_10121861	Not Available	1327	Open in IMG/M
3300029994\|Ga0302283_1305185	Not Available	552	Open in IMG/M
3300030041\|Ga0302274_10047504	All Organisms → cellular organisms → Bacteria	2557	Open in IMG/M
3300030044\|Ga0302281_10367553	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300030051\|Ga0302195_10190778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	952	Open in IMG/M
3300030519\|Ga0302193_10124075	Not Available	1532	Open in IMG/M
3300030520\|Ga0311372_12141141	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031524\|Ga0302320_10120422	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4105	Open in IMG/M
3300031525\|Ga0302326_10592617	Not Available	1651	Open in IMG/M
3300032562\|Ga0316226_1001095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	31306	Open in IMG/M
3300032665\|Ga0316221_1194774	Not Available	677	Open in IMG/M
3300032675\|Ga0316225_1057796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1416	Open in IMG/M
3300032753\|Ga0316224_1028245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2616	Open in IMG/M
3300033402\|Ga0326728_10004064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	44046	Open in IMG/M
3300033402\|Ga0326728_10262162	Not Available	1629	Open in IMG/M
3300033405\|Ga0326727_10011136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21079	Open in IMG/M
3300033405\|Ga0326727_10927148	Not Available	647	Open in IMG/M
3300033405\|Ga0326727_11161789	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300033823\|Ga0334837_000315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	41615	Open in IMG/M
3300033824\|Ga0334840_073164	Not Available	983	Open in IMG/M
3300034091\|Ga0326724_0523378	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300034124\|Ga0370483_0041902	Not Available	1424	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.46%
Aquatic	Environmental → Aquatic	49.54%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.54%
Peat	Environmental → Terrestrial → Peat	31.19%
Soil	Environmental → Terrestrial → Soil	19.27%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	44.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	31.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.60%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.67%
Lake	Environmental → Aquatic → Freshwater → Lake	0.92%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	42.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	31.19%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.84%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	3.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	21.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	20.18%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	11.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.34%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	6.42%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.50%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.50%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.59%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	3.67%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.75%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.83%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002162	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-21A	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24139J26690_10933231	3300002162	Arctic Peat Soil	VLLLSGFFIVLASLVLLTSLQQRXAFVAAGFGVEVLGLVLLTQRYKSMTEEQR*
JGI24140J50213_100920162	3300003369	Arctic Peat Soil	LKLFACVLLLSGFFIVLASLVLLTSLQQRFAFVAAGFGVEVLGLVLLTQRYKSMTEEQR*
Ga0062389_1034809302	3300004092	Bog Forest Soil	LRLVGCLLLLSGFFIVLAALVLLTSLTQRFAFVAAGFGVEALGLALLTQAHKSVEKEQE*
Ga0075520_11978482	3300006795	Arctic Peat Soil	LKLFACVLLLSGFFIVLASLVLLTSLQQRFAFVAAGFGVEVLGLVLLTQSYKSMTEEQR*
Ga0075520_12502992	3300006795	Arctic Peat Soil	ACVLLLSGFFIVLASLVLLTSLQQRFGFVAAGFSVEVIGLVLLTQSYKSMTEEQR*
Ga0116114_10350222	3300009630	Peatland	LKLVACVLLLSGFFIVLAALVLLTSLAQRSAFVGAGFGVEALGLSLLTHAYRPIRKEHR*
Ga0116126_10500922	3300009640	Peatland	LKLGACLLLLFGFFIVLTALVMLTSLAQRSAFVAAGFGVEILGLSLLTHAYKATQKEHR*
Ga0074045_105920311	3300010341	Bog Forest Soil	LKLVACVLLLSGFFIVLAALVLLTSLGQRSAFAGAGFGVEILGLALLTQSYRSIRKEHR*
Ga0181539_11250452	3300014151	Bog	LKLGACLLLLFGFFIVLTALVMLTSLAQRSTFVGAGFGVEALGLSLLTHAYKATQKEHR*
Ga0181524_104703692	3300014155	Bog	ASLKLVACVLLLSGFFIVLAALVLLTSLAQRSAFVGAGFGVEALGLSLLTHAYRPIRKEHR*
Ga0181518_104878992	3300014156	Bog	LKLVACVLLLSGFFLVLTALVLLTSLAQRSAFVAAGFGVEILGLSLLTQSYRSIRKEHR*
Ga0181517_100092756	3300014160	Bog	LKLVACVLLLSGFFIVIAALVLLTSLGQRSAFVGAGFGVEILGLALLTQSYRSIRKEHR*
Ga0181517_100718621	3300014160	Bog	KFHRENSIKGASLKLVACVLLLSGFFLVLTALVLLTSLAQRFAFVGAGFGVEILGLSLLTQSYRSIHKEHR*
Ga0181517_101121342	3300014160	Bog	LKLVACVLLLSGFFIVLAALVLLTSLLQRSAFVAAGFCVEVIGLGLLTQSYKSMTEEQR*
Ga0181517_101475592	3300014160	Bog	LKLVACVLLLSGFFIVLAALAMLTSLAQRSTFVGAGFGVEALGLSLLTHAYRSIRKEHR*
Ga0181517_101515142	3300014160	Bog	FHHRNSLKGDSLKLVACVLLLSGFFIVLAALVLLTSLGQRSAFVGAGFGVEILGLALLTQSYRSIRKEHR*
Ga0181517_104201352	3300014160	Bog	LKLGACLLLLFGFFLVLASLVLLPSLEQRAVFAAAGFGVEVLGLSLLTLSYKSIGREHR*
Ga0181529_100027105	3300014161	Bog	LKLVACLLLLSGFFLVLAALVLLTSLQQRFAFVAAGFGVEVLGLVLLTQSYKSMTEEQR*
Ga0181529_101769222	3300014161	Bog	LKLGACLLLLSGFFIGLVALVLLSSTGQRFAFVTAGIGVEVLGLALLTQSYRSIGKEQR*
Ga0181532_106056581	3300014164	Bog	LKLVACVLLLSGFFIVLAALVLLTSLGQRSAFVGAGFGVEILGLALLTQSYRSIRKEHR*
Ga0181528_103684431	3300014167	Bog	SGFFIVLAALAMLTSLAQRSTFVGAGFGVEALGLSLLTHAYRSIRKEHR*
Ga0181534_109961532	3300014168	Bog	LRLFGCLLLLSGCFLVLSALVMLTAFPQRCVFIAAGLAIELLGLTLLTLGHRPVQKEQP*
Ga0181535_104033212	3300014199	Bog	LKLVACVLLLSGFFIALIALALLGSIGQRFAFVLAGFGVEVLGVALLTNSYRPNAKEQQ*
Ga0181526_105418352	3300014200	Bog	GFFIVLAALVLLTSLAQRSAFVGAGFGVEALGLSLLTHAYRPIRKEHR*
Ga0182018_100586443	3300014489	Palsa	VSIRYRCIQAKKGDSLRLAGCLLLLSGFFIVLTALVLLAALPQRFAFTAAGLAVEGLGLGMLTMGHKPVEKEQR*
Ga0182014_100611623	3300014491	Bog	LKLFACVLLLSGFFIVLAALVLLTSVQQRFAFVAAGFGVEVLGLVLLTQSYKSMTEEQR*
Ga0182013_100550632	3300014492	Bog	LKLVACVLLLSGFFIVLAALVLLTSLQQRSGFVAAGFCVEVIGLGLLTQSYKSMTEEQR*
Ga0182013_101344942	3300014492	Bog	LKLVACVLLLSGFFLVLASLVLLTSIGQRSAFAVAGFAVEVLGVSLLTQAYRTTGREQR*
Ga0182013_104376582	3300014492	Bog	LKLFACVLLLSGFFLVLASLVLLISLQQRFAFVAAGFCVEVIGLVLLTQSYKSMTEEQR*
Ga0182017_100199262	3300014494	Fen	LKLFACLLLLSGFFIVLAALVLLTSLGQRSAFVAAGFGVEVLGLSLLTQAYKTMRREQR*
Ga0182011_100061443	3300014496	Fen	LLSGFFIALVALALLGSMGERFAFVAAGFAVEVLGLALLTNSYRPTLKEQK*
Ga0182011_106190172	3300014496	Fen	VLLLSGFFIVLAALAVLTSLGQRSAFVGAGFGVEILGLSLLIHAYRTLRKEHR*
Ga0182012_101532152	3300014499	Bog	LKLVACVLLLSGFFLVLASLVLLISLQQRFAFVAAGFCVEVIGLVLLTQSYKSMTEEQR*
Ga0181519_100835552	3300014658	Bog	LKLVACVLLLSGFFLVLTALVLLTSLAQRFAFVGAGFGVEILGLSLLTQSYRSIHKEHR*
Ga0182030_103925872	3300014838	Bog	LKLFGCLLLLSGFFIVLVALVLLSAFPQRLAFVAAGLAVEALGLGLLTHGHKPVAKEQR*
Ga0182027_100625784	3300014839	Fen	VLLLSGFFLVLTALVLLTSIEQRSAFVVAGFAVEALGLSLLTQSYRTMRREHR*
Ga0182027_122011462	3300014839	Fen	LKLVACVLLLSGFFLVLASLVLLTSIGQRSAFAVAGFAVEVLGVSLLTQADRTTGREQR*
Ga0181509_11877272	3300016701	Peatland	LVACLLLLSGFFLVLAALVLLTSLQQRFAFVAAGFGVEVLGLVLLTQSYKSMTEEQR
Ga0187877_11765022	3300017931	Peatland	LKLGACLLLLFGFFIVLTALVMLTSLAQRSAFVGAGFGVEILGLSLLTQSYRSIRKEHR
Ga0187848_1000042613	3300017935	Peatland	LKLGACLLLLSGFFIVLAALALLTSLAQRSAFVGAGFGVEALGLSLLTHAYKATRREHR
Ga0187848_102213201	3300017935	Peatland	LKLVACVLLLSGFFIVLAALVLLTSLAQRSAFVGAGFGVEALGLSLLTHAYRSIRKEHR
Ga0187854_101244812	3300017938	Peatland	LKLGACLLLLFGFFIVLTALVMLTSLAQRSAFVAAGFGVEILGLSLLTHAYKATQKEHR
Ga0187853_102875282	3300017940	Peatland	PNKFHRENSIEGASLKLVACVLLLSGFFIVLAALVLLTSLAQRSAFVGAGFGVEALGLSLLTHAYRPIRKEHR
Ga0187879_108184242	3300017946	Peatland	LKLGACLLLLFGFFIVLTALVMLTSLAQRSAFVAAGFGVEILGLSLLTHAYKTMRREQR
Ga0187847_100117802	3300017948	Peatland	LKLVACVLLLSGFFIVLAALVLLTSLLQRSAFVAAGFCVEVIGLGLLTQSYKSMTEEQR
Ga0187847_103528692	3300017948	Peatland	LKLVACVLLLSGFFLVLTALVLLTSLAQRSAFVGAGFGVEILGLSLLTQSYRSIRKEHR
Ga0181520_100207162	3300017988	Bog	LKLVACVLLLSGFFIVLAALVLLTSLGQRSAFVGAGFGVEILGLALLTQSYRSIRKEHR
Ga0181520_100250584	3300017988	Bog	LKLVACVLLLSGFFIALIALALLGSIGQRFAFVLAGFGVEVLGVALLTNSYRPNAKEQQ
Ga0181520_102064002	3300017988	Bog	LKLVACVLLLSGFFLVLTALVLLTSLAQRFAFVGAGFGVEILGLSLLTQSYRSIHKEHR
Ga0181520_102518161	3300017988	Bog	LKLVACVLLLSGFFIVLAALAMLTSLAQRSTFVGAGFGVEALGLSLLTHAYRSIRKEHR
Ga0181520_106864202	3300017988	Bog	LKLVACLLLLSGFFIVLVALVLLAPLGERFVFVAAGLGVEVLGLALLTQSYKPTRKEQR
Ga0181520_109398082	3300017988	Bog	NKFHRENSIKGASLKLVACVLLLSGFFLVLTALVLLTSLAQRSAFVAAGFGVEILGLSLLTQSYRSIRKEHR
Ga0187888_12783142	3300018008	Peatland	LKLVACVLLLSGFFIVLAALVLLTSLAQRSAFVGAGFGVEALGLSLLTHAYRPIRKEHR
Ga0187860_11387112	3300018014	Peatland	LKLGACLLLLFGFFIVLTALVMLTSLTQRSAFVAAGFGVEILGLSLLTHAYKATQKEHR
Ga0187874_103754172	3300018019	Peatland	LKLVACVLLLSGFFIVLAALVLLTSLQQRFAFVAAGFGVEVLGLVLLTQSYKSMTEEQR
Ga0187889_100695922	3300018023	Peatland	LKLGACLLLLSGFFIVLAALALLTSLAQRSAFVAAGFGVEILGLSLLTHAYKTMRREQR
Ga0187867_104953621	3300018033	Peatland	LKLVACLLLLSGFFLVLAALVMLSSLAQRSAFVVAGFGVEVLGLSLLTHA
Ga0187875_106596631	3300018035	Peatland	GASLKLVACVLLLSGFFIVLAALAMLTSLAQRSTFVGAGFGVEALGLSLLTHAYRSIRKEHR
Ga0187855_104769671	3300018038	Peatland	LRLFGCLLLLSGFFIVPVALVLLTALPQRLAFTAAGLAVEALGLGMLTMGHKPVEKEPR
Ga0187887_101047352	3300018043	Peatland	LKLVACLLLLSGFFLVLAALVMLSSLAQRSAFVVAGFGVEVLGLSLLTHAYKTMRREQR
Ga0187887_109102862	3300018043	Peatland	LKLVACLLLLSGFFLVLAALVMLTSLAQRSAFVGAGFGVEVLGLSLLTHAYKTVRREHR
Ga0187890_101805473	3300018044	Peatland	LKLVACVLLLSGFFIVIAALVLLTSLGQRSAFVGAGFGVEILGLALLTQSYRSIRKEHR
Ga0187851_102720512	3300018046	Peatland	SIKGASLKLVACVLLLSGFFLVLTALVLLTSLAQRFAFVGAGFGVEILGLSLLTQSYRSIRKEHR
Ga0187851_106342161	3300018046	Peatland	GASLKLVACVLLLSGFFIVLAALVLLTSLAQRSAFVGAGFGVEALGLSLLTHAYRPIRKEHR
Ga0187852_13918432	3300019082	Peatland	LKLGACLLLLSGFFIVLAALALLTSLAQRSAFVGAGFGVEALGLSLLTHAYKAT
Ga0182028_10526761	3300019788	Fen	VASLLSGFFLVLASLVLLASLAQRSAFVAAGFGVEVLGLSLLTHAYKTMRREHR
Ga0182028_12461332	3300019788	Fen	LKLVACLLLLSGFFLVLASLVLLASLAQRSAFVAAGFGVEVLGLSLLTHAYKTMRREHR
Ga0224534_10939892	3300022524	Soil	LKLFACLLLLSGFFIVLAALVLLTSLGQRSAFVAAGFGVEVLGLSLLTQAYKTMRREQR
Ga0212088_1000985612	3300022555	Freshwater Lake Hypolimnion	LKLVACVLLLLGFFIVLVALVLLTSMEQRSAFIGAGLGVEILGLALLTQAYRTHRKEHR
Ga0224531_100001663	3300022849	Soil	LKLFACLLLLSGFFIVLAALVLLSPLQERFAFVAAGFGVEILGLVLLTQSYKSMTEEQR
Ga0224554_100000653	3300023068	Soil	LKLFACVLLLSGFFIVLAALVLLTSLQQRFAFVAAGFCVEVLGLVLLTQSYKSMTEEQR
Ga0224554_10523632	3300023068	Soil	LKLFACVLLLSGFFLVLASLVLLISLQQRFAFVAAGFCVEVIGLVLLTQSYKSMTEEQR
Ga0224520_10820141	3300023075	Soil	LKLFACLLLLSGFFIVLAALVLLTSLGQRSAFVAAGFGVEVLGLSLLTQAYK
Ga0208937_10309272	3300025506	Peatland	LKLGACLLLLSGFFIVLAALALLTSLAQRSAFVAAGFGVEILGLSLLTHAYKATQKEHR
Ga0255350_10504702	3300026502	Soil	LKLVACVLLLSGFFLVLTALVLLTSIEQRSAFVVAGFAVEALGLSLLTQSYRTMRREHR
Ga0302198_101958232	3300028765	Bog	LLSGFFIVLVALALLGSLGQRFAFVLAGFGVEVLGVVLLTNSYRPNIKEQR
Ga0302198_103146271	3300028765	Bog	SGKGDALKLVACVLLLSGFFIVLAALVLLTSLQQRSGFVAAGFCVEVIGLGLLTQSYKSMTEEQR
Ga0302201_100310173	3300028785	Bog	LKLVACLLLLSGFFITLVALALLGSMGERFAFVLAGFAVEILGIALLTQSYRSPQKEQR
Ga0302157_106932241	3300028813	Bog	IKGDALKLVACVLLLSGFFLVLASLVLLTSIGQRSAFAVAGFAVEVLGVSLLTQAYRTTGREQR
Ga0302197_102685562	3300028873	Bog	GDCLKLVACLLLLSGFFITLVALALLGSMGERFAFVLAGFAVEILGIALLTQSYRSPQKEQR
Ga0311329_103283081	3300029907	Bog	LKLFACVLLLSGFFLVLASLVLLISLQQRFAFVAAGFCVEVIGLVLLTQSY
Ga0311361_101068815	3300029911	Bog	TSLHEFQCTNAHEGASLKLVACVLLLSGFFIVLVALALLGSLGQRFAFVLAGFGVEVLGVVLLTNSYRPNIKEQR
Ga0311371_116017742	3300029951	Palsa	LRLVGCVLLLSGFFLVLAALVLLTSPGERIAFVAAGLGVEVLGLALLTQGYKSLQKGPA
Ga0311371_119126442	3300029951	Palsa	LKLAGCLMLLSGWIIVLAALVLLPGLGLRSAFVAAGLAVEIVGLGLIARGQVDAE
Ga0302276_100940782	3300029992	Bog	LKLVACVLLLSGFFIVLAALVLLTSLQQRSGFVAAGFCVEVIGLGLLTQ
Ga0302276_101218611	3300029992	Bog	KGDALKLVACVLLLSGFFIVLAALVLLTSLQQRSGFVAAGFCVEVIGLVLLTQSYKSMTEEQR
Ga0302283_13051851	3300029994	Fen	LKLVACVLLLSGFFLVLASLVLLISLQQRFAFVAAGFCVEVIGLVLLTQSYKSMTEEQR
Ga0302274_100475043	3300030041	Bog	LVACVLLLSGFFLVLASLVLLTSIGQRSAFAVAGFAVEVLGVSLLTQAYRTTGREQR
Ga0302281_103675532	3300030044	Fen	LKLVACVLLLSGFFLVLASLVLLTSIGQRSAFAVAGFAVEVLGVSLLTQAY
Ga0302195_101907782	3300030051	Bog	LKLVACVLLLSGFFIVLVALALLGSLGQRFAFVLAGFGVEVLGVVLLTNSYRPNIKEQR
Ga0302193_101240752	3300030519	Bog	GKGDALKLVACVLLLSGFFIVLAALVLLTSLQQRSGFVAAGLCVEVIGLGLLTQSYKSMTEEQR
Ga0311372_121411412	3300030520	Palsa	LRLVGCVLLLSGFFLVLAALVLLTSPGERIAFVAAGLGVEVLGLALLTQG
Ga0302325_121791922	3300031234	Palsa	LRLFGCALLLSGFFIVLVALVLLSAFPQRLAFVAAGLAVEALGVGLLTHGHKPVAKEQR
Ga0302320_101204222	3300031524	Bog	LKLVACVLLLSGFFIVLAALVLLTSLGQRFAFVGAGFAVEFLGLILLTQAYRTHRKEHR
Ga0302326_105926171	3300031525	Palsa	LLLLSGFFLVLAALVMLTSLSQRFAFVGAGLAVELLGLGLLTHGYKPPRKEQP
Ga0316226_100109516	3300032562	Freshwater	LKLVACMMLLLGFFIVLVALVLLTSVGERSAFIAAGLGVEIQGLALLTQAYRTHRKEHR
Ga0316221_11947741	3300032665	Freshwater	ASEDIPSRELIKGDSLKLVACLLLLSGFFIVLAALVLLTSLGQRSAFVAAGFGVEVLGLSLLTQAYRAVRREHR
Ga0316225_10577962	3300032675	Freshwater	LKLVACLLLLSGFFIVLAALVLLTSLGQRSAFVAAGFGVEVLGLSLLTQAYRAVRREHR
Ga0316224_10282451	3300032753	Freshwater	LKLVACMMLLLGFFIVLVALVLLTSVGERSAFIAAGLGVEIQGLALLTQAYRTHRK
Ga0326728_1000406417	3300033402	Peat Soil	LKLGACLLLLSGFFIVLAALALLTSLAQRSAFVGAGFGVEALGLSLLTHAYKATRREQR
Ga0326728_102621622	3300033402	Peat Soil	CLLLLSGFFIVLVALVLLASIGQRFAFVVAGFGVEVLGVALLTQSYRPTHKEQQ
Ga0326727_1001113610	3300033405	Peat Soil	LKLVACVLLLSGFFLVLAALVLLTSFEQRSAFVGAGFAVEVLGLSLLTQSYRTIRKEHR
Ga0326727_109271481	3300033405	Peat Soil	VACVLLLSGFFIVLVALALLGSIGQRFAFVLAGFGVEVLGVALLTNSYRPNAKEQR
Ga0326727_111617892	3300033405	Peat Soil	LKLVACVLLLSGFFLVLAALVLLTSFEQRSAFVGAGFAVEVLGLSLLTQSNRTIRKEHR
Ga0334837_000315_7519_7680	3300033823	Soil	VLLLSGFFLVLTALVLLTSIEQRSAFVVAGFAVEALGLSLLTQSYRTMRREHR
Ga0334840_073164_4_165	3300033824	Soil	VLLLSGFFLVLASLVLLISLQQRFAFVAAGFCVEVIGLVLLTQSYKSMTEEQR
Ga0326724_0523378_1_153	3300034091	Peat Soil	MKLVACVLLLSGFFIVLAALVLLTSLGQRSAFVGAGFGVEVLGLALLTHSY
Ga0370483_0041902_1186_1365	3300034124	Untreated Peat Soil	VRLIGCVLLLSGFAIVLAALVLLTALAQRFAFVGAGFGIEILGLALLTQGYKSVQKARG
Ga0370483_0224463_15_173	3300034124	Untreated Peat Soil	LLLSGFFIVLTALVLLTALPQRFAFTAAGLAVEGLGLGMLTMGHKPVEKEQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088615

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences