Metagenome Family F088596

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088596
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	73 residues
Representative Sequence	MLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Number of Associated Samples	94
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.39 %
% of genes near scaffold ends (potentially truncated)	34.86 %
% of genes from short scaffolds (< 2000 bps)	76.15 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (44.954 % of family members)
Environment Ontology (ENVO)	Unclassified (37.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.17% β-sheet: 0.00% Coil/Unstructured: 47.83%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13581	HATPase_c_2	13.76
PF09137	Glucodextran_N	8.26
PF09335	SNARE_assoc	5.50
PF07992	Pyr_redox_2	1.83
PF00873	ACR_tran	1.83
PF13533	Biotin_lipoyl_2	1.83
PF12804	NTP_transf_3	0.92
PF12831	FAD_oxidored	0.92
PF02954	HTH_8	0.92
PF08281	Sigma70_r4_2	0.92
PF00723	Glyco_hydro_15	0.92
PF00890	FAD_binding_2	0.92
PF00529	CusB_dom_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	9.17
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	5.50
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	5.50
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	5.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	51.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	51.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	27.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	51.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	27.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27.52 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.38 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	51.38 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1064534	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300002560\|JGI25383J37093_10021630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2156	Open in IMG/M
3300002561\|JGI25384J37096_10020544	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2573	Open in IMG/M
3300002562\|JGI25382J37095_10001913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6556	Open in IMG/M
3300002911\|JGI25390J43892_10096877	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300002914\|JGI25617J43924_10351855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300005167\|Ga0066672_10587806	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005171\|Ga0066677_10798241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005178\|Ga0066688_10607575	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005179\|Ga0066684_10248963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1166	Open in IMG/M
3300005181\|Ga0066678_10708087	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005445\|Ga0070708_100018277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5866	Open in IMG/M
3300005555\|Ga0066692_10229186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1169	Open in IMG/M
3300005559\|Ga0066700_10705716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300005575\|Ga0066702_10544096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300005586\|Ga0066691_10375048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300005602\|Ga0070762_10000461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17128	Open in IMG/M
3300006028\|Ga0070717_10164810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1925	Open in IMG/M
3300006796\|Ga0066665_10923096	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300006797\|Ga0066659_11868355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300006804\|Ga0079221_11314580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300007255\|Ga0099791_10066837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1626	Open in IMG/M
3300007258\|Ga0099793_10107152	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300007258\|Ga0099793_10384290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	689	Open in IMG/M
3300007265\|Ga0099794_10057366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1887	Open in IMG/M
3300007788\|Ga0099795_10074441	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1287	Open in IMG/M
3300009038\|Ga0099829_11309980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300009088\|Ga0099830_11513423	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300009143\|Ga0099792_10520119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300010159\|Ga0099796_10100126	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1089	Open in IMG/M
3300010159\|Ga0099796_10556659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300011269\|Ga0137392_10202160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1625	Open in IMG/M
3300011270\|Ga0137391_10627382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M
3300011271\|Ga0137393_10311024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1342	Open in IMG/M
3300011271\|Ga0137393_10483789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1062	Open in IMG/M
3300012096\|Ga0137389_10375020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1213	Open in IMG/M
3300012189\|Ga0137388_11466317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300012200\|Ga0137382_10104066	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300012202\|Ga0137363_10096951	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2232	Open in IMG/M
3300012202\|Ga0137363_10878327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300012203\|Ga0137399_10460102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1065	Open in IMG/M
3300012203\|Ga0137399_11449952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300012205\|Ga0137362_10594255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	954	Open in IMG/M
3300012205\|Ga0137362_10843352	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300012206\|Ga0137380_10118591	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300012211\|Ga0137377_10880173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	827	Open in IMG/M
3300012349\|Ga0137387_10058729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2590	Open in IMG/M
3300012361\|Ga0137360_10846479	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300012582\|Ga0137358_10830412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300012683\|Ga0137398_10069973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2137	Open in IMG/M
3300012917\|Ga0137395_10496411	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300012922\|Ga0137394_10028140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4550	Open in IMG/M
3300012924\|Ga0137413_10274730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1167	Open in IMG/M
3300012925\|Ga0137419_11028885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300012925\|Ga0137419_11241483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300012927\|Ga0137416_11053594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300012929\|Ga0137404_10951967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300012944\|Ga0137410_10858717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300012944\|Ga0137410_12010179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300015054\|Ga0137420_1305267	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300015357\|Ga0134072_10070355	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300018431\|Ga0066655_10036471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2443	Open in IMG/M
3300018433\|Ga0066667_10701303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300018468\|Ga0066662_10165945	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300018482\|Ga0066669_12300597	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300019789\|Ga0137408_1058775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1605	Open in IMG/M
3300020170\|Ga0179594_10006414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3067	Open in IMG/M
3300020199\|Ga0179592_10248094	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300020199\|Ga0179592_10300288	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300020583\|Ga0210401_10237220	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300021171\|Ga0210405_10000461	All Organisms → cellular organisms → Bacteria	54349	Open in IMG/M
3300021432\|Ga0210384_10953385	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300021559\|Ga0210409_10027463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5490	Open in IMG/M
3300024330\|Ga0137417_1007174	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3214	Open in IMG/M
3300024330\|Ga0137417_1091430	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300025939\|Ga0207665_10179402	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300026301\|Ga0209238_1000291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16940	Open in IMG/M
3300026309\|Ga0209055_1166887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300026322\|Ga0209687_1121793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	840	Open in IMG/M
3300026324\|Ga0209470_1117175	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300026328\|Ga0209802_1273603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300026333\|Ga0209158_1015936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3510	Open in IMG/M
3300026333\|Ga0209158_1166759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300026334\|Ga0209377_1119532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1060	Open in IMG/M
3300026334\|Ga0209377_1193599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300026499\|Ga0257181_1018367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1018	Open in IMG/M
3300026514\|Ga0257168_1025332	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1248	Open in IMG/M
3300026527\|Ga0209059_1017099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3292	Open in IMG/M
3300026529\|Ga0209806_1099415	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300026532\|Ga0209160_1265934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300026538\|Ga0209056_10060125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3329	Open in IMG/M
3300026542\|Ga0209805_1003344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9145	Open in IMG/M
3300026548\|Ga0209161_10036965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3311	Open in IMG/M
3300026548\|Ga0209161_10354481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300026548\|Ga0209161_10385259	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	618	Open in IMG/M
3300026551\|Ga0209648_10284425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1197	Open in IMG/M
3300026557\|Ga0179587_10788374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300026557\|Ga0179587_10920124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300027173\|Ga0208097_1021576	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300027643\|Ga0209076_1002566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3963	Open in IMG/M
3300027862\|Ga0209701_10171486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1311	Open in IMG/M
3300027908\|Ga0209006_10801515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300031720\|Ga0307469_10087805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2134	Open in IMG/M
3300031753\|Ga0307477_10212815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1343	Open in IMG/M
3300031754\|Ga0307475_10032845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3787	Open in IMG/M
3300031820\|Ga0307473_10418893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300031962\|Ga0307479_10014745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7329	Open in IMG/M
3300032180\|Ga0307471_100001297	All Organisms → cellular organisms → Bacteria	13621	Open in IMG/M
3300032205\|Ga0307472_101024618	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.58%
Loam	Environmental → Terrestrial → Soil → Loam	6.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	44.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.01%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10645342	3300002557	Grasslands Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
JGI25383J37093_100216303	3300002560	Grasslands Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGVCLAFLWFYWR*
JGI25384J37096_100205443	3300002561	Grasslands Soil	MLTNQEPDWNINALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
JGI25382J37095_100019136	3300002562	Grasslands Soil	MLTNQEPDWNIXALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
JGI25390J43892_100968773	3300002911	Grasslands Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGV
JGI25617J43924_103518552	3300002914	Grasslands Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIA
Ga0066672_105878061	3300005167	Soil	DARCRDECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0066677_107982411	3300005171	Soil	IHDARCRDECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
Ga0066688_106075751	3300005178	Soil	RDECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
Ga0066684_102489632	3300005179	Soil	MLTNQEPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGVCLAFLWFYWR*
Ga0066678_107080872	3300005181	Soil	LTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0070708_1000182775	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPNDQDQDIGVVICVCLYIAMSVCLAFLWFYWR*
Ga0066692_102291862	3300005555	Soil	VKRLRPRSDGEVPIHDARCRDECVSVLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLWFYWR*
Ga0066700_107057161	3300005559	Soil	MLTNQEPDWNIDDLTDTEIYDAICYLEPAPTTAAEHDSGDQDQGDGVVICVRFYIALGVCLAFLWFYWR*
Ga0066702_105440961	3300005575	Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0066691_103750482	3300005586	Soil	VKRLRPRSDGEVPIHDARCRDECVSVLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAM
Ga0070762_1000046119	3300005602	Soil	MLTNQEPDWNIDALTDKEIYAAIHYLEPDPRNAPEQDPNDQDQDIGIVICVCLYIAMSVCLAFLWFYWR*
Ga0070717_101648103	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLTNQEPDWNFDALTDTEIYAAIHYLEPDPRNAPEQDPNDQDQDIGVVICVCLYIAMSVCLAFLWFYWR*
Ga0066665_109230961	3300006796	Soil	EPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
Ga0066659_118683552	3300006797	Soil	MTQTNLDGEVPKHDARCRDECVSMLTNQEPDWNIDALTDTEIHAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0079221_113145802	3300006804	Agricultural Soil	GDEMTQTNFRWRSSDTRCRDECVSMLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPNDQDQDIGDVICVCLYIAMSVCLAFLWFYWR*
Ga0099791_100668372	3300007255	Vadose Zone Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPASTTAAEQDSGDQDQGDGVVICVCLYIALGVCLAFLWFYWR*
Ga0099793_101071521	3300007258	Vadose Zone Soil	TDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATGLAFVCFYWR*
Ga0099793_103842901	3300007258	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFCWR*
Ga0099794_100573663	3300007265	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYIALGVCLAFPWFYWR*
Ga0099795_100744412	3300007788	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYAAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
Ga0099829_113099802	3300009038	Vadose Zone Soil	MLTNQEPDWNIDDLTDTEIYDAICYLEPAPTTAAEHDSGGQDQGDGLAICVCLYIALGVCLAFLWFYWR*
Ga0099830_115134231	3300009088	Vadose Zone Soil	WNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0099792_105201191	3300009143	Vadose Zone Soil	VLTNQVPDWNIDALTDTEIYVAIHYLEPDPRNAPEQDPDDRDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0099796_101001262	3300010159	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0099796_105566592	3300010159	Vadose Zone Soil	EPDWNIDDLTDTEIYDAICYLEPAPTTAAEHDSGGQDQGDGLVICVCLYIALGVCLAFLCFYWR*
Ga0137392_102021602	3300011269	Vadose Zone Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVAICVCLYIALGVCLAFLWFYWR*
Ga0137391_106273821	3300011270	Vadose Zone Soil	MTQTNLDGEVPKHDARCRDECVSMLTNQEPDWNIDDLTDTEIYDAICYLEPAPTTAAEHDSGGQDQGDGLAICVCLYIALGVCLAFLWFYWR*
Ga0137393_103110243	3300011271	Vadose Zone Soil	EPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGVCLAFLWFYWR*
Ga0137393_104837891	3300011271	Vadose Zone Soil	MIESHLINQEPDWNIDDLTDTEIYDAICYLEPAPTTAAEHDSGDQDQGDGAAICVCLYIALGLCLAFLWFYWR*
Ga0137389_103750202	3300012096	Vadose Zone Soil	MLTNQESDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137388_114663171	3300012189	Vadose Zone Soil	PTSDGEVPKHDARCRDECVSMLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137382_101040663	3300012200	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALASCLAFVCFYWR*
Ga0137363_100969511	3300012202	Vadose Zone Soil	MLTNQEPDWNIDALTDTDIYAAIHYLEPDPRNAPEQDPNDQDQDIGVVICVCLYIAMSVSLAFLWFYWR*
Ga0137363_108783271	3300012202	Vadose Zone Soil	MTQTNLDGEVPKQDARCRDECVSMLTNQEPDWNIDALTATEIYAAIHCLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137399_104601022	3300012203	Vadose Zone Soil	MLTNQEPDWNIDALTDTDIYAAIHYLEPDPRNAPEQDPNDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137399_114499522	3300012203	Vadose Zone Soil	MLTNREPDWNIDDLTDTEIYDAICYLDPAPTTAAEQDSGDQGQGDGVVICVCLYIALGICLAFLWFYWR*
Ga0137362_105942551	3300012205	Vadose Zone Soil	MLTNQEPDWNIDALIDTDIYAAIHYLEPDPRNAPEQDPNDQDQDIGVVICVCLYIAMSVSLAFLWFYWR*
Ga0137362_108433522	3300012205	Vadose Zone Soil	HGGSWPRFWETGGLKPTKFFSGPTFGAEDEMTQTNLDGEVPKQDARCKDECVSMLTNQEPDWNIDALTATEIYAAIHCLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYCG*
Ga0137380_101185911	3300012206	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALAICLAVVCFYWR*
Ga0137377_108801732	3300012211	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPNDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137387_100587295	3300012349	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALA
Ga0137360_108464792	3300012361	Vadose Zone Soil	SGPTFGAGDEMTQTNLDGEVPKQDARCRDECVSMLTNQEPDWNIDALTATEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137358_108304121	3300012582	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYAAIHYLEPDQETRPSSYPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137398_100699732	3300012683	Vadose Zone Soil	MLTNQEPDWNIEALTDTEIHTAIHYLEPDPRNASEQDPDAQDQDIGVVICVCLYIAMSVCLAFLWFYWR*
Ga0137395_104964112	3300012917	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIHTAIHYLEPDPRNASEQDPDAQDQDIGVVICVCLYIAMSVCLAFLWFYWR*
Ga0137394_100281402	3300012922	Vadose Zone Soil	MLTNREPDWNIDDLTDTEIYDAICYLDPAPTTAAEQDSGDQDQGDGVVICVCLYIALGICLAFLWFYWR*
Ga0137413_102747301	3300012924	Vadose Zone Soil	LTDTEIYDAICYLEPAPTTAAEHDSGGQDQGDGLAICVCLYIALGVCLAFLWFYWR*
Ga0137419_110288851	3300012925	Vadose Zone Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAQQRRAEQDSADQDQGDGVVICVCLYIALGVCLAFPWFYWR*
Ga0137419_112414831	3300012925	Vadose Zone Soil	MTQTNLDGEVPKQDARCRDECVSMLTNQEPDWNIDALTATEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLWFYWR*
Ga0137416_110535942	3300012927	Vadose Zone Soil	MLTNQEPDWNIDALTDTDIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFVRCYWR*
Ga0137404_109519671	3300012929	Vadose Zone Soil	MTQTNLDGEVPKQDARCRDECVSMLTNQEPDWNIDALTATEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR*
Ga0137410_108587171	3300012944	Vadose Zone Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQDDGVVICVCLYIALGVCLAFPWFYWR*
Ga0137410_120101791	3300012944	Vadose Zone Soil	MLTNQEPDWNIDVLTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLWFYWR*
Ga0137420_13052673	3300015054	Vadose Zone Soil	MLTNQERDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
Ga0134072_100703552	3300015357	Grasslands Soil	MLTNQEPDWNIEALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR*
Ga0066655_100364713	3300018431	Grasslands Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGVCLAFLWFYWR
Ga0066667_107013032	3300018433	Grasslands Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0066662_101659453	3300018468	Grasslands Soil	PIHDARCRDECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0066669_123005971	3300018482	Grasslands Soil	MLTNQEPDWNINALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0137408_10587752	3300019789	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Ga0179594_100064141	3300020170	Vadose Zone Soil	REPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGVCLAFLWFYWR
Ga0179592_102480942	3300020199	Vadose Zone Soil	MTQTNFDGEVLIHDARFRDECVSMLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Ga0179592_103002881	3300020199	Vadose Zone Soil	DECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0210401_102372203	3300020583	Soil	MLTNQEPDWNIDALTDKEIYAAIHYLEPDPRNAPEQDPNDQDQDIGIVICVCLYIAMSVCLAFLWFYWR
Ga0210405_1000046141	3300021171	Soil	MLTNQEPDWNIDGLTDTEIYAAIHYLEPDPRNAPEQDPNDQDQDVGVVICVCLYIVMSVCLAFLWFYWR
Ga0210384_109533852	3300021432	Soil	MTQTNLGWRSSDTRCRDECVSMLTNQEPDWNIDALTDKEIYAAIHYLEPDPRNAPEQDPNDQDQDIGIVICVCLYIAMSVCLAFLWFYWR
Ga0210409_100274635	3300021559	Soil	MLTNQEPDWNIDALTDKEIYAAIHYLERDPRNAPEQDPNDQDQDIGIVICVCLYIAMSVCLAFLWFYWR
Ga0137417_10071746	3300024330	Vadose Zone Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYIALGVCLAFPWFYWR
Ga0137417_10914302	3300024330	Vadose Zone Soil	MLTNQEPDWNIGALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Ga0207665_101794022	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLTNQEPDWNIHDLTDTDIYAAILYLEPASTKAAEQESSDQDQDYGVVICVCLYIALAVCLAFLWFHWR
Ga0209238_10002917	3300026301	Grasslands Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGVYLAFLWFYWR
Ga0209055_11668871	3300026309	Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGGLVGLPVV
Ga0209687_11217931	3300026322	Soil	MLTNQEPDWNIDDLTDTEIYDAICYLEPATTAAEHDSGGQDQGDGLAICVCLYIALGVCLVFPWFYWR
Ga0209470_11171751	3300026324	Soil	VSMLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0209802_12736031	3300026328	Soil	MTQTNLDGEVPKHDARCRDECVSMLTNQEPDWNIDALTDTEIHAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Ga0209158_10159362	3300026333	Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDTGVVICVCLYIAMSVCLAFVCFYWR
Ga0209158_11667592	3300026333	Soil	VKRLRPRSDGEVPIHDARCRDECVSVLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCL
Ga0209377_11195321	3300026334	Soil	VKRLRPRSDGEVPIHDARCRDECVSVLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLA
Ga0209377_11935992	3300026334	Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLA
Ga0257181_10183672	3300026499	Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAAEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0257168_10253321	3300026514	Soil	MLTNQEPDWNIDALTDTDIYAAIHYLEPDPRNAPEQDPNDQDQDIGVVICVCLYIAMSVSLAFLWFYWR
Ga0209059_10170991	3300026527	Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDTGVVICVCLYIAMSVCLAFLRFYWR
Ga0209806_10994151	3300026529	Soil	DECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Ga0209160_12659341	3300026532	Soil	FGAGDEMTQTNLDGEVPKHDARCRDECVSMLTNQEPDWNIDALTDTEIHAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Ga0209056_100601254	3300026538	Soil	MLTNREPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0209805_10033448	3300026542	Soil	EPAWNINALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0209161_100369656	3300026548	Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRSTGDDVVFW
Ga0209161_103544812	3300026548	Soil	MLTNREPDWNIDDLTDTEIYDAICYLEPAPTTAAEQDSGDQDQGDGVVICVCLYIALGG
Ga0209161_103852592	3300026548	Soil	VPIHDARCRDECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0209648_102844252	3300026551	Grasslands Soil	MLTNQEPDWNIDALTDTEIHTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFVCFYWR
Ga0179587_107883741	3300026557	Vadose Zone Soil	MTQTNLDGEVPKQDARCKDECVSMLTNQEPDWNIDALTATEIYAAIHCLEPDPRNAPEQDPDDQDQDIGVVISVCLYIAMSVCLAF
Ga0179587_109201241	3300026557	Vadose Zone Soil	FFSGPTFGAGDEMTQTNFDGEVLIHDARFRDECVSMLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDDQDQDIGVVICVCLYIAMSVCLAFLRFYWR
Ga0208097_10215762	3300027173	Forest Soil	DWNIDALTDKEIYAAIHYLEPDPRNAPEQDPNDQDQDIGIVICVCLYIAMSVCLAFLWFYWR
Ga0209076_10025663	3300027643	Vadose Zone Soil	RDECVSMLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYIALGVCLAFPWFYWR
Ga0209701_101714861	3300027862	Vadose Zone Soil	MLTNQEPDWNIDDLTDTEIYDAICYLEPAPTTAAEHDSGDQDQGDGVVICVCLYIALGVCLAFPWFYWR
Ga0209006_108015152	3300027908	Forest Soil	MLTNQEPDWNIEDLTDKQIYAVICYLDPEPGNAAEQDSGDQDRGSGVVICVCLYIAVLGCFTFGWLYWR
Ga0307469_100878053	3300031720	Hardwood Forest Soil	MTQTNFDGEVLIHNARCRDECVSMLKNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDAQDQDIGVVICVCLYIAMSVCLAFLWFYWR
Ga0307477_102128152	3300031753	Hardwood Forest Soil	MLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPNDQDQNIGVVISVCLYVAMSVCLAFLWFYWR
Ga0307475_100328454	3300031754	Hardwood Forest Soil	MLTNQEPDWNIDALTDTEIYTAIHYLEPDSGNAGEQDSGDHGRDNGVVICVCLYTALATCLAFLWFYWR
Ga0307473_104188932	3300031820	Hardwood Forest Soil	MLTNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDAQDQDIGVVICVCLYIAMSVCLAFLWFYWR
Ga0307479_100147455	3300031962	Hardwood Forest Soil	MLTNQEPDWNIDALTDTEIYAAIHYLEPHSGNAGEQDLGDHGRDNGVVICVCLCTALATCLAFLWFYWR
Ga0307471_1000012975	3300032180	Hardwood Forest Soil	MTQTNFDGEVLIHDARCRDECVSMLKNQEPDWNIDALTDTEIYAAIHYLEPDPRNAPEQDPDAQDQDIGVVICVCLYIAMSVCLAFLWFYWR
Ga0307472_1010246182	3300032205	Hardwood Forest Soil	SSDARCRDECISMLTNQEPDWSSDALTDTEIYAAIHYLEPDPRNAPEHDPNDQDQDISVVICVCLYFAMSVCLAFLWFYWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088596

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences