Metagenome Family F088591

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088591
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	79 residues
Representative Sequence	MFKRLMILGIAGLVFVLGANYLLVYTLNQQVTRERERQDRTYWSTFNAIEQFGEHPDTGTEQKAKAALDEATRK
Number of Associated Samples	80
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.73 %
% of genes near scaffold ends (potentially truncated)	95.41 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.330 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (54.128 % of family members)
Environment Ontology (ENVO)	Unclassified (49.541 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.128 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.65% β-sheet: 0.00% Coil/Unstructured: 32.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00990	GGDEF	15.60
PF13620	CarboxypepD_reg	1.83
PF00106	adh_short	0.92
PF14294	DUF4372	0.92
PF01609	DDE_Tnp_1	0.92
PF12867	DinB_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.92
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.92
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.92
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.92
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.92
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.33 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.33 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.33 %
Unclassified	root	N/A	3.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.93 %
Unclassified	root	N/A	3.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.50 %
Unclassified	root	N/A	3.67 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.50 %
Unclassified	root	N/A	3.67 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.50 %
Unclassified	root	N/A	3.67 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.50 %
Unclassified	root	N/A	3.67 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.50 %
Unclassified	root	N/A	3.67 %
Xanthomonas sacchari	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas sacchari	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002911\|JGI25390J43892_10115336	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300002917\|JGI25616J43925_10112414	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300004635\|Ga0062388_102605244	Not Available	531	Open in IMG/M
3300005174\|Ga0066680_10471511	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005175\|Ga0066673_10044642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2208	Open in IMG/M
3300005179\|Ga0066684_10545065	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005181\|Ga0066678_10201695	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300005568\|Ga0066703_10357154	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300006046\|Ga0066652_100868645	Not Available	861	Open in IMG/M
3300006050\|Ga0075028_100216814	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300006050\|Ga0075028_100681400	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006050\|Ga0075028_100694667	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006796\|Ga0066665_11081183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas sacchari	612	Open in IMG/M
3300006804\|Ga0079221_10575801	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300007255\|Ga0099791_10478335	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300007258\|Ga0099793_10076363	All Organisms → cellular organisms → Bacteria → Acidobacteria	1522	Open in IMG/M
3300007258\|Ga0099793_10412510	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300007265\|Ga0099794_10014521	All Organisms → cellular organisms → Bacteria → Acidobacteria	3452	Open in IMG/M
3300007265\|Ga0099794_10378751	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300009038\|Ga0099829_10365082	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300009038\|Ga0099829_11577261	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300009088\|Ga0099830_11444023	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300009088\|Ga0099830_11543254	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300009089\|Ga0099828_11075326	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010322\|Ga0134084_10033873	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300010322\|Ga0134084_10226362	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300010326\|Ga0134065_10020268	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300010337\|Ga0134062_10639102	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300011269\|Ga0137392_11380847	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300011270\|Ga0137391_10408359	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300011270\|Ga0137391_11526412	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300011271\|Ga0137393_10435161	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300011271\|Ga0137393_10435790	All Organisms → cellular organisms → Bacteria → Acidobacteria	1123	Open in IMG/M
3300012096\|Ga0137389_11256755	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300012096\|Ga0137389_11526193	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300012189\|Ga0137388_10323266	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300012199\|Ga0137383_10257089	Not Available	1280	Open in IMG/M
3300012200\|Ga0137382_10313295	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300012200\|Ga0137382_10757075	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300012202\|Ga0137363_11044230	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012207\|Ga0137381_10314122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300012208\|Ga0137376_11478490	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012209\|Ga0137379_11635373	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300012210\|Ga0137378_10715194	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300012211\|Ga0137377_10112350	All Organisms → cellular organisms → Bacteria	2589	Open in IMG/M
3300012211\|Ga0137377_10286826	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300012211\|Ga0137377_10341586	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300012285\|Ga0137370_10269761	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300012285\|Ga0137370_10490736	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012361\|Ga0137360_10711136	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300012362\|Ga0137361_10302270	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300012363\|Ga0137390_10887998	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300012582\|Ga0137358_10542600	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300012685\|Ga0137397_10372233	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300012917\|Ga0137395_10801854	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012923\|Ga0137359_11060455	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012924\|Ga0137413_11229118	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300012925\|Ga0137419_10651383	Not Available	850	Open in IMG/M
3300012925\|Ga0137419_11395670	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012927\|Ga0137416_10293929	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300012927\|Ga0137416_10647388	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300012927\|Ga0137416_11516462	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012927\|Ga0137416_12038766	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012972\|Ga0134077_10155218	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300014157\|Ga0134078_10647497	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300014166\|Ga0134079_10026049	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300015052\|Ga0137411_1001941	All Organisms → cellular organisms → Bacteria → Acidobacteria	2263	Open in IMG/M
3300015054\|Ga0137420_1040867	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300015054\|Ga0137420_1127424	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300015054\|Ga0137420_1280820	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300015054\|Ga0137420_1388638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2775	Open in IMG/M
3300015356\|Ga0134073_10065866	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300015357\|Ga0134072_10163492	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300018468\|Ga0066662_12987912	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300018482\|Ga0066669_11401581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300020006\|Ga0193735_1057734	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300020199\|Ga0179592_10014490	All Organisms → cellular organisms → Bacteria → Acidobacteria	3450	Open in IMG/M
3300020199\|Ga0179592_10496558	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300020581\|Ga0210399_10937255	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300021088\|Ga0210404_10190788	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300021170\|Ga0210400_10810056	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300021479\|Ga0210410_11113932	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300021559\|Ga0210409_10584953	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300024330\|Ga0137417_1204404	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300024330\|Ga0137417_1363970	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300024330\|Ga0137417_1459185	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300026277\|Ga0209350_1088228	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300026285\|Ga0209438_1047986	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300026304\|Ga0209240_1187982	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300026316\|Ga0209155_1051609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1596	Open in IMG/M
3300026496\|Ga0257157_1067394	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300026499\|Ga0257181_1035195	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300026508\|Ga0257161_1074598	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300026551\|Ga0209648_10168132	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300026551\|Ga0209648_10686414	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300027616\|Ga0209106_1118244	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027671\|Ga0209588_1044389	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300027862\|Ga0209701_10155195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1394	Open in IMG/M
3300027862\|Ga0209701_10687504	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300028536\|Ga0137415_10667722	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300031718\|Ga0307474_11322382	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031720\|Ga0307469_10221805	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300031820\|Ga0307473_10270361	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300031962\|Ga0307479_10170535	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300031962\|Ga0307479_10257985	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300031962\|Ga0307479_10392583	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300031962\|Ga0307479_10628247	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300032180\|Ga0307471_101323094	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300032205\|Ga0307472_100720057	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.33%
Aquatic	Environmental → Aquatic	3.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.33%
Sediment	Environmental → Aquatic → Sediment	2.75%
Freshwater	Environmental → Aquatic → Freshwater	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Loam	Environmental → Terrestrial → Soil → Loam	2.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	63.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	54.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.75%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25390J43892_101153362	3300002911	Grasslands Soil	MYKRIVVLGIMGLTFVLGANYLLVYTLNQQVVREGNQQDNVYWKTFNAIEQFGEHPATGTEHKAKAALD
JGI25616J43925_101124142	3300002917	Grasslands Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVTRERERQDLTYWSTFNAIEQFGAHPDKGTEHAAKAALDEAHQKGLSKV
Ga0062388_1026052442	3300004635	Bog Forest Soil	LILGIASLVFVLGANYLLVYTLNKERDRQDRAYLSTYNIIEQFGAHPDAVTELKAKAALDEARQ
Ga0066680_104715111	3300005174	Soil	MFKRLMILGIIGIVFVLGANYLLVYALNQQVKRERERQGENYWSAYAAIVRFGQHPDTASEQKAKAALDEASRKGLSVTRAKILQN
Ga0066673_100446421	3300005175	Soil	MYKRIVVLGIMGLSFFLGANYLLVYTLNQQVVRERERQDRLYWGTFNAIEQFGERPDTGTEQKARSALEEARQRSLNK
Ga0066684_105450651	3300005179	Soil	LFKRLTILGIAGIVFVLGANYLLVYTLNQQVNRRRDPQDESYWSAYTAIVQFARHPDSASEQKAKAALDEASRKGVS
Ga0066678_102016951	3300005181	Soil	MYKRIVVLGIGALLFVWGASYLLVYSLNQQVVRERERQDRVYWSAFNAIEQFGERPDTGTEQKAKSALAEARQRSLNKDR
Ga0066703_103571542	3300005568	Soil	LFKRLMILGIAGVVFVLGVNYLLVYTLNQQVNRHRDPQDESYWSAYTAIVQFAQHPDGASKQKAKVALDEASRK
Ga0066652_1008686452	3300006046	Soil	MFKRLMILGIAGLMFVLGANYLLVYTLNQQATRERERQDRTYWSVFNAVEQFGEHADQVTEQ
Ga0075028_1002168141	3300006050	Watersheds	MFKRLMILGIAGVVFVLGANYLLVYTLNKERERQDRTYWATYTAIEQFGEHPDVVSELKAKDALEYARQKGLARIRVKILQTY
Ga0075028_1006814002	3300006050	Watersheds	MFKRLMILGIAGLVFVLGANYLLVYTVNQQVTRERERQDRTYWSTFNAIEQFGEHADASTEQKAKAALEEARSKGLSKIRVRILQN
Ga0075028_1006946672	3300006050	Watersheds	MFKRLMILGIAGLVFVLGANYLLVYTLNQQVTRERERQDRTYWSTFNAIEQFGEHPDTGTEQKAKAALDEATRK
Ga0066665_110811831	3300006796	Soil	MFKRLMILGIAGLMFVLGANYLLVYTLNQQATRERERQDRTYWSVFNAVEQFGEHADQVTEQKAKAALDEARQKGLSKI
Ga0079221_105758011	3300006804	Agricultural Soil	VFKRLIILGIAGTVFVLGTNYLLVYTLNQQVKRQRNLQDENYWSAYTAIEQFGEHPDGPSEQKAKAALDTASRKGLSKTRAKILQNYL
Ga0099791_104783351	3300007255	Vadose Zone Soil	MFKRLAILGIAGIVFVLGANYLLVYTLKQQVTRERERQDQNYWGAYNAIVQFGQHPDSTSEQRAKAALDEASRKGLSKARAKILQNYLEDLE
Ga0099793_100763631	3300007258	Vadose Zone Soil	MILGIAGLTFVLGANYLLVYTLKQQMTRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKAALD
Ga0099793_104125101	3300007258	Vadose Zone Soil	MFKKLAILGIGVLVFVLGANYLLVYTLKQQITRERERQDRSYWSAYNAIVQFGQHPDSATEQKAKAALDEASRKGLSKTRAKILQNYLED
Ga0099794_100145211	3300007265	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYSLNQQVAREREQQDRTYWSAFNAIEQFGEHPDKVTKEKAKAALDD
Ga0099794_103787512	3300007265	Vadose Zone Soil	MFKKLAILGIAVLVFVLGANYLLVYTLKQQITRERERQDRNYWSAYNAIVQFGQHPDSTSEQKAKAALDEASRKGLSKT
Ga0099829_103650821	3300009038	Vadose Zone Soil	MFKRFMIFGILGLAFVLGANYLLVYTLKQQVTRERERQDRTYWSAFNAIKQFDEHLDPGTEQKAKGALEEARQKGLSKIRVRILQNYLE
Ga0099829_115772612	3300009038	Vadose Zone Soil	MFKRLMILGIVGLVFVLGANYLLVYTLKQQVTRERDRQDHTYWSAFNAIEQFGEHPGADTEQKAKAALNEA
Ga0099830_114440231	3300009088	Vadose Zone Soil	MLKRLMILGTVGIVFVLGANYLLVYALNQQVKRERDRQDSNYWNAYTAIVQFGQHPDSASEQKAKDALDEASRRGVSKTRTKI
Ga0099830_115432542	3300009088	Vadose Zone Soil	MFKRLMILGLAGVAFVLGANYLLIYTLNQQAMRERERQDRAYWSAYNAIEQFGEHPSADAEHAAQAALD
Ga0099828_110753261	3300009089	Vadose Zone Soil	MFKRLAILGIAGIVFVLGANYLLVYTLKQQVTRERERQDQNYWGAYNAIVQFGQHPDSASEQKAKAALDEASRKGLNKTRAKILQNYL
Ga0134084_100338733	3300010322	Grasslands Soil	VFKRLIILGIAGTVFVLGTNYLLVYTLNQQVKRQRNLQDENYWSAYTAIEQFGEHPDRASEQKAKAALDEAYRKGLSKTRAKLLQNYLDDLQH
Ga0134084_102263622	3300010322	Grasslands Soil	MFKRLMILGIAGLMFVLGANYLLVYTLNQQATRERERQDRTYWSVFNAVEQFGEHADQVTEQKAKAALDEARQKGLSKIR
Ga0134065_100202681	3300010326	Grasslands Soil	MILGIAGVVFVLGVNYLLVYTLNQQVNRHRDPQDESYWSAYTAIVQFAQHPDGASKQKAKVALDEAS
Ga0134062_106391021	3300010337	Grasslands Soil	MFKRLMILGIAGLTFVLGANYFLVYTLNQRVTRERERQDRTYWSAFNAVEQIGEHADRATEQTAKAGLDEARQKGLS
Ga0137392_113808471	3300011269	Vadose Zone Soil	MFKKLAILGIGVLVFVLGANYLLVYTLKQQITRERERQDRNYWSAYNAIVQFGQHPDSATEQKAKAALDE
Ga0137391_104083592	3300011270	Vadose Zone Soil	MFKRLMILGIVGLVFVLGANYLLVYTLKQQVTRERDRQDRTYWSAFNAIEQFGEHPGADTEQKAKAALNEASQKGLSKVR
Ga0137391_115264121	3300011270	Vadose Zone Soil	MFKRLMILGIVGLVFVLGANYLLVYTLKQQVTRERDRQDHTYWSAFNAIEQFGEHPGADTEQKAKAALNEASQKGLSKVR
Ga0137393_104351611	3300011271	Vadose Zone Soil	MFKRLMILGIVGLVFVLGANYLLVYTLKQQVTRERDRQDRTYWSAFNAIEQFGEHPGADTEQKAKAALNEASQKGLSKVRARILQNYLE
Ga0137393_104357903	3300011271	Vadose Zone Soil	MFKRLMILGIAGLAFVLGANYLLVYTLKQQVARERERQDRTYWSAFNAIEQFGEHPDKVTKEKAKAASEDSRQGGLSKIRARILQHYFEDLERC
Ga0137389_112567551	3300012096	Vadose Zone Soil	MFKRFMIFGIIGLVFVLGANYLLVYTLKQQVTRERERQDRTYWSAFNAIKQFDEHLDTGAEQKANAALNEARQKGLSKI
Ga0137389_115261931	3300012096	Vadose Zone Soil	MFKRLMILGIAGLAFVLGANYLLVYTLKQQVTRERERQDRTYWSAFNAIEQFGEHPDKVTKEKAKAAL
Ga0137388_103232662	3300012189	Vadose Zone Soil	MFKRLMIFGIIGIAFVLGANYLLVYALKQQVTRERERQDRTYWSAFNAIKQFDEHLDTGTEQKAKAALEEARQKGLSKIRVRILQNHLEHLER*
Ga0137383_102570892	3300012199	Vadose Zone Soil	MFKRLMILGIAGLMFVLGANYLLVYTLNQPATRERERQDRTYWSVFNAVEQFGEHADQVTEQKAKAALDE
Ga0137382_103132952	3300012200	Vadose Zone Soil	MFKRLMILGIAGLTFVLGANYFLVYTLNQRVTRERERQDRTYWSAFNAVEQFGEHADRVTEQKAKAALDEARQKGLSKIRARILQTYFEDLEHC
Ga0137382_107570751	3300012200	Vadose Zone Soil	MFKRLMILGIAGLTFVLGANYLLVYTLNQRVTRERERQDRTYWSAFNAVERFGEHADQVTEQKAKAALDEARQKGL
Ga0137363_110442301	3300012202	Vadose Zone Soil	MILGIAGLTFVLGANYLLVYTLKQQMIRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKAAL
Ga0137381_103141222	3300012207	Vadose Zone Soil	MFKRLAILGIAGLVFVLGANYLLVYTLKQQVTRERERQDQNYWSAYNAIVQFGQHPDSASEQRAKAALDEASRK
Ga0137376_114784902	3300012208	Vadose Zone Soil	MYKRLVVLGIGGLLFVLGASYLLVYTLNQQVVRERERQDRVYWSTFNAIEQFGERPDTGTEQKAKSALAEARQRSLNKDRVRILQDYLEDLERCY
Ga0137379_116353731	3300012209	Vadose Zone Soil	MYKRIVVLGIVGLVFVLGASHLLVYTLNQQVVRQRERQDRVYWSTFNAIKQFGERPDTGTEQKAKSALEEARQRSLNRDRVRILQNYLEDLE
Ga0137378_107151942	3300012210	Vadose Zone Soil	MFKRLMILGIAGLTFVLGANYLLVYTLNQQVTRERERQDRTYWSAFNAVEQFGEHADQVTEQKAKAALDEARQKGLSKIRARILQ
Ga0137377_101123501	3300012211	Vadose Zone Soil	MFKRLMILGIAGLTFVLGANYLLVYTLNQQVTRERERQDRTYWSAFNAVERFGEHADQVTEQKAKAALDEARQKGLSKMRARILQTYFEDLEHCY*
Ga0137377_102868261	3300012211	Vadose Zone Soil	MFKKLAILGIAALVFVLGANYLLVYTLKQQVTRERERQDQNYWSAYTAIVQFGQHPDSASEQRAKTALDEASRKGLSKGRAKTLQNYLEDLE
Ga0137377_103415862	3300012211	Vadose Zone Soil	MFKRLMILGIAGLMFVLGANYLLVYTLNQQATRERERQDRTYWSVFNAVEQFGEHADQVTEQKAKAALDEARQKGLSKIRARILQTYFEDLEHC
Ga0137370_102697611	3300012285	Vadose Zone Soil	MILGIAGVVFVLGTNYLLVYTLNQQVKRTRNLQDESYWSAYAAIVQFARHPDSASEQKAKAALDETSRKGVSKPREKILQTYFED
Ga0137370_104907361	3300012285	Vadose Zone Soil	MYKRIVVLGIVGLSFALGANYLLVYTLNRQVVRERERQDRVYWSTFNAIEQFGERPDTGTEQKARSALQEARQRSLNKDRVRI
Ga0137360_107111362	3300012361	Vadose Zone Soil	MFKRLMILGTIGIVFVLGANYLLVYALNQQVQRERDRQGENYWSAYTAIVRFGQHPDSASELKAKAALDDASR
Ga0137361_103022702	3300012362	Vadose Zone Soil	MFKRLMILGIVGLVFVLGANYLLVYTLKQQVTRERDRQDRTYWSAFNAIEQFGEHPGADTEQKAKAALNEASQKGLSKVRARILQNYLEDLEHC*
Ga0137390_108879982	3300012363	Vadose Zone Soil	MFKRLMILGIMGLTFVLGANYLLVYTLNQQATRERERQDRTYWSAFNAVEQFGEHADQVTEQQAK
Ga0137358_105426002	3300012582	Vadose Zone Soil	MFKRLMILAIAGLTFVLGANYLLVYTLKQQMTRERERQDRTYWSAFNAVEQFGEHADQV
Ga0137397_103722333	3300012685	Vadose Zone Soil	MFKRLMILGIAAVAFVLGANYLLVYTLNKERERQDRTYWATYTAIEQFGEHPDAASELKAKDTLENARQKGLARIRVKILQTYLEDLE
Ga0137395_108018542	3300012917	Vadose Zone Soil	VFKRLIILGIAGLTFVLGANYLLVYTLKQQMTRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKA
Ga0137359_110604552	3300012923	Vadose Zone Soil	VFKRLIILGIAGLTFVLGANYLLVYTLKQQMTRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKAALDEA
Ga0137413_112291182	3300012924	Vadose Zone Soil	MFKRLAILGIAGIVFVLGANYLLVYTLKQQVTRERERQDQNYWGAYNAIVQFGQHPDSTSEQRAKAALDEASRKGLSKTRAKILQNYLEDLER
Ga0137419_106513832	3300012925	Vadose Zone Soil	MFKRLMILGIAAVAFVLGANYLLVYTLNKERERQDRTYWATYTAIEQFGQHPDAASELKAKDTLEN
Ga0137419_113956702	3300012925	Vadose Zone Soil	MILGIAGIAFVLGANYLLVYTLNQQVKRERERQNESYWNAYAAIVQFAQHPDGVTEQKAKAALDEASRKDVSKTGAKILQNYLEDLQR
Ga0137416_102939291	3300012927	Vadose Zone Soil	MFKRLMILGIAGLTFVLGANYLLVYTLNQQVTRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKAALDEARQKGLSKIRARILQTYFED
Ga0137416_106473881	3300012927	Vadose Zone Soil	MFKRLMILGTVGIVLVLGANYLLVYALNEQVKRERERQGETYWSAYTAIVQFGQHPDSASEQKAKAAV
Ga0137416_115164621	3300012927	Vadose Zone Soil	MFKRLMILGIAGLTFVLGANYLLVYTLNQQVTRERERQDRTYWSAFNAVEQFGEHADQATEQKAKAALDEARQKGLSKIRARILQSYFEDL
Ga0137416_120387661	3300012927	Vadose Zone Soil	MFKRLMILAIAGLTFVLGANYLLVYTLNQQVTRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKAALDEA
Ga0134077_101552182	3300012972	Grasslands Soil	VFKRLIILGIAGTVFVLGTNYLLVYTLNQQVKRQRNLQDENYWSAYTAIEQFGEHPDRASEQKAKAALDEAYRKGLSK
Ga0134078_106474971	3300014157	Grasslands Soil	MYKRIVVLGIMGLSFFLGANYLLVYTLNQQVVRERERQDRLYWGTFNAIEQFGERPDTGTEQKARSALEEARQRSLNKDR
Ga0134079_100260493	3300014166	Grasslands Soil	MILGIAGVVFVLGVNYLLVYTLNQQVNRHRDPQDESYWSAYTAIVQFAQHPDGASKQKAKVALDEASRKGVSKTREKILQ
Ga0137411_10019411	3300015052	Vadose Zone Soil	MFKRLMILGIAGLTFVLGANYLLVYTLNQQVTRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKAALDEARQKGLSKIRARILQTYFEDLEAL
Ga0137420_10408671	3300015054	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVKRERERQDRTYWSTFNAIEQFGAHPDKGTEHAAK
Ga0137420_11274241	3300015054	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNQQVARERERQDGTYWSTFNAIEQFGAHPDKGTEQKAKAALDEAHQKGLSKVRAR
Ga0137420_12808201	3300015054	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVTRERERQDRTYWSTFNAIEQFGAYPDKGTEHAA
Ga0137420_13886384	3300015054	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNQQVARERERQDGTYWSTFNAIEQFGAHPDKGTEQKAKAALDEAHQKGLSKVRARI
Ga0134073_100658661	3300015356	Grasslands Soil	VFKRLIILGIAGTVFVLGTNYLLVYTLNQQVKRQRNLQDENYWSAYTAIEQFGEHPDRASEQKAKAALDEAYRKGLSKTRAKLLQNYL
Ga0134072_101634921	3300015357	Grasslands Soil	VFKRLIILGIAGTVFVLGTNYLLVYTLNQQVKRQRNLQDENYWSAYTAIEQFGEHPDRASEQKAKAALDE
Ga0066662_129879121	3300018468	Grasslands Soil	MFKRLMILGIIGIVFVLGANYLLVYALNQQVKRERERQGENYWSAYAAIVRFGQHPDTASEQKAKAALDEASRKGLSV
Ga0066669_114015812	3300018482	Grasslands Soil	MYKRIVVLGIVGLSFALGANYLLVYTLNRQVVRERERQDRVYWSTFNAIEQFGERPDTGTEQKARSALQEARQRSLNKDRVRILQ
Ga0193735_10577342	3300020006	Soil	MFKRLMILGIAGLTFVLGANYLLVYTLNQQVTRERERQDRTYWSAFNAVEQFGERADKVTEQKAKAALD
Ga0179592_100144901	3300020199	Vadose Zone Soil	VFKRLIILGIAGLTFVLGANYLLVYTLKQQMTRERERQDRTYWSAFNAVEQFGEHADQVSEQKAKAALD
Ga0179592_104965581	3300020199	Vadose Zone Soil	MFKKLMILGVVGLVFVLGANYLLVYTVKQQVTRERERQDRTYWSAFNAIEQFGEHPGADTEQKAKSALDDASRKGLSKIRARVLQN
Ga0210399_109372551	3300020581	Soil	MFKRLMILGTAGVVFILGANYLLVYTLNKERERQDRTYWTTYTAIEQFGERPDAVHELQAKAALDNARQKGLARLRMKILQCYLDDLEHCY
Ga0210404_101907881	3300021088	Soil	MFKRLMILGIAGLALILGANYLLVYSLNQQVARQRERQDRTYWSAFNAIEQFGEHPDKVTKEKAKTALDDARQRGLGKIR
Ga0210400_108100562	3300021170	Soil	MFKRLMILGIAGLAFILGANYLLVYSLNQQVARERERQDRTYWGAFTAIEQFGEHPDKVTKQKAKDALDDARQRGL
Ga0210410_111139321	3300021479	Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQIARERERQDLTYWSTFNAIEQFGAHPDKDTEHAAKAALDEARQKGLSKVHAKILQ
Ga0210409_105849531	3300021559	Soil	MFKKLMILGGVLLVFVLGANYLLVYTVKQQVTRERDRQDRTYWSAFNAIEQFGEHPGADTEQKAKSALDEASRNGLSKIR
Ga0137417_12044043	3300024330	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVTRERERQDRTYWSTFNAIEQFGAHPDKGTEHAAKAALNEAHQKGLSKVRARILQKYFEDLEH
Ga0137417_13639702	3300024330	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKRVTRERERQDRTYWSTFNAIEQFGAHPDKGTEHAAKAALDEAHQKA
Ga0137417_14591854	3300024330	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVTRERERQDRTYWSTFNAIEQFGAHPDKGTEHAAKAALNEAHQKA
Ga0209350_10882282	3300026277	Grasslands Soil	MYKRIVVLGIMGLTFVLGANYLLVYTLNQQVVREGNQQDNVYWKTFNAIEQFGEHPATGTEHKAKAALDEARQRGLSKNRARILQNYFEDLER
Ga0209438_10479863	3300026285	Grasslands Soil	MFKRLMILGIAGLAFILGANYLLVYTLNQQVARERERQDGTYWSTFNAIEQFGAHPDKGTEQKAKAALDEAHQKGLSKVRARILQKYFEDLEHCY
Ga0209240_11879821	3300026304	Grasslands Soil	MFKRLMILGIVGLVFVLGANYLLVYTLKQQVTRERDRQDRTYWSAFNAIEQFGEHPGADTEQKAKAALNEASQKGLSKVRARILQNY
Ga0209155_10516091	3300026316	Soil	MYKRIVVLGIMGLSFFLGANYLLVYTLNQQVVRERERQDRLYWGTFNAIEQFGERPDTGTEQKARSALEEARQR
Ga0257157_10673942	3300026496	Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVTRERERQDRTYWSTFNAIEQFGAHPDKGSEHAA
Ga0257181_10351952	3300026499	Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVTRERERQDRTYWSTFNAIEQFGAHPDKGTEHAAKAALDEAHQKGLSKV
Ga0257161_10745981	3300026508	Soil	MFKRLMILGIAGLAFILGANYLLVYTLNKQVTRERERQDRTYWSTFNAIEQFGAHPDKGTEHAAKAALNEAHQ
Ga0209648_101681323	3300026551	Grasslands Soil	MFKRLMIFGIIGIAFVLGANYLLVYALKQQVTRERERQDRTYWSAFNAIKQFDEHLDTGTEQKAKAALEEARQKGLSKIRVRILQ
Ga0209648_106864142	3300026551	Grasslands Soil	MFKKLAILGIAGLVFVLGANYLLVYTLKQQVTRERERQDRNYWSAYNAIVLFGQRPDNASEQRAKAALDQAT
Ga0209106_11182441	3300027616	Forest Soil	MFKRLMILGIAGLVFVLGANYLLVYTLNKERERQDRAYWSTYTAIEQFGEHPDAVSELKAKAALDNVRQKGLAKIRVKILQN
Ga0209588_10443893	3300027671	Vadose Zone Soil	MFKRLMILGIAGLAFILGANYLLVYTLNQQVARERERQDRTYWSAFNAIEQFGEHPDKVTKEKAKAALDDARQRG
Ga0209701_101551951	3300027862	Vadose Zone Soil	MFKRLAILGIAGIVFVLGANYLLVYTLKQQVTRERERQDQNYWGAYNAIVQFGQHPDTASEQRAKAALDEASRKG
Ga0209701_106875041	3300027862	Vadose Zone Soil	MLKRLMILGTVGIVFVLGANYLLVYALNQQVKRERDRQDSNYWNAYTAIVQFGQHPDSASEQKAKDALDEASRRGVSKTRTKILQN
Ga0137415_106677222	3300028536	Vadose Zone Soil	MFKRLMILGTVGIVLVLGANYLLVYALNEQVKRERERQGETYWSAYTAIVQFGQHPDSASEQKAKAAVDEASRKGVS
Ga0307474_113223821	3300031718	Hardwood Forest Soil	MFKKLMILGVVALVFVLGANYLLVYTVKQQMTRERDRQDRTYWSAFNAIEQFGEHPDADTEQKAKSALDEASRNG
Ga0307469_102218053	3300031720	Hardwood Forest Soil	MFKRLMILGIMGITFVLGANYLLVYALNQQVKRERDRQGENYWSAYAAIVRFGQHPDSASEQKAKAALD
Ga0307473_102703612	3300031820	Hardwood Forest Soil	MYKRIVVLGILGLLFVLGASYLLVYTLSQQVVRERERQDRVYWSTFNAIEQFGERPDTGTEQKAKSALEEARQRSLNKDRVRILQNYLQDL
Ga0307479_101705353	3300031962	Hardwood Forest Soil	MFKRLMILGIIGITFVLGANYLLVYALNQQAKRERDRQNPNYWNAYAAIVRFGQHPDSASEQRAKAAL
Ga0307479_102579852	3300031962	Hardwood Forest Soil	MFKRLMILGIAAVVFVLGANYLLVYTLKKERERQDRTYWSTYTAIEQFGEHPDAVTELKAKAALDNARQKGLAAI
Ga0307479_103925833	3300031962	Hardwood Forest Soil	MFKKLAILGIAVLFFVLGANYLLVYTLKQQVTKERERQNRNYWSAYNAIVEFGQHPDSVSEQKAKAALDEASRK
Ga0307479_106282472	3300031962	Hardwood Forest Soil	MILGIAGIVFVLGANYLLVYTLNQQVQRDRERQNESYWSAYTAIEQFGQHPDGASEQKAKAALEEASRKGLSMTRAKILQNYLEDLQ
Ga0307471_1013230941	3300032180	Hardwood Forest Soil	MFKRLMILGLIGIAFVLGANYLLVYSLNQQVKRERERQGENYWSAYTAIVHFGQHPDSASEQKAKAALDEASRKGLNKT
Ga0307472_1007200572	3300032205	Hardwood Forest Soil	MYKRIVVLGILGLLFVLGASYLLVYTLSQQVVRERERQDRVYWSTFNAIEQFGERPDTGTEQKAKSALEEARQRSLNKDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088591

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences