Metagenome / Metatranscriptome Family F088588

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088588
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	102 residues
Representative Sequence	MLRRVSFFVATLLLAVGALLTQLVTATHPVHSAVEDVESAASPDPFRVPPDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Number of Associated Samples	88
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.39 %
% of genes near scaffold ends (potentially truncated)	41.28 %
% of genes from short scaffolds (< 2000 bps)	81.65 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.349 % of family members)
Environment Ontology (ENVO)	Unclassified (32.110 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.890 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.85% β-sheet: 9.16% Coil/Unstructured: 70.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF07452	CHRD	26.61
PF00912	Transgly	25.69
PF13442	Cytochrome_CBB3	7.34
PF07730	HisKA_3	0.92
PF04199	Cyclase	0.92
PF13177	DNA_pol3_delta2	0.92
PF04468	PSP1	0.92
PF05977	MFS_3	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	25.69
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	25.69
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	25.69
COG1774	Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development)	Signal transduction mechanisms [T]	0.92
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.92
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.92
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.92
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.92
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.92
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.42 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	17.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Unclassified	root	N/A	2.75 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.43 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Unclassified	root	N/A	2.75 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.43 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Unclassified	root	N/A	2.75 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.43 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Unclassified	root	N/A	2.75 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.43 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Unclassified	root	N/A	2.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.43 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	7.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %
Unclassified	root	N/A	2.75 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105747639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1442	Open in IMG/M
3300000550\|F24TB_11151510	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300004157\|Ga0062590_100187530	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300004479\|Ga0062595_100085275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1616	Open in IMG/M
3300005093\|Ga0062594_100164541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1481	Open in IMG/M
3300005168\|Ga0066809_10193905	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300005294\|Ga0065705_10121964	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300005294\|Ga0065705_11144576	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300005295\|Ga0065707_10380599	All Organisms → cellular organisms → Bacteria → Acidobacteria	872	Open in IMG/M
3300005330\|Ga0070690_100599748	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300005330\|Ga0070690_101612853	Not Available	526	Open in IMG/M
3300005332\|Ga0066388_100868746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1485	Open in IMG/M
3300005332\|Ga0066388_103623143	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300005334\|Ga0068869_101015158	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300005338\|Ga0068868_100145542	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300005340\|Ga0070689_100019154	All Organisms → cellular organisms → Bacteria	5057	Open in IMG/M
3300005340\|Ga0070689_100941788	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005340\|Ga0070689_101008930	All Organisms → cellular organisms → Bacteria → Acidobacteria	741	Open in IMG/M
3300005354\|Ga0070675_101896056	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300005355\|Ga0070671_101770659	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300005356\|Ga0070674_101580471	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300005364\|Ga0070673_100297057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1421	Open in IMG/M
3300005365\|Ga0070688_101344572	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005526\|Ga0073909_10040051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1653	Open in IMG/M
3300005543\|Ga0070672_100433102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300005577\|Ga0068857_100588666	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300005615\|Ga0070702_101077479	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300005617\|Ga0068859_100532282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300005713\|Ga0066905_100330441	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005713\|Ga0066905_100517645	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300005719\|Ga0068861_100372540	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005841\|Ga0068863_100013431	All Organisms → cellular organisms → Bacteria	7897	Open in IMG/M
3300005843\|Ga0068860_100569523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300005937\|Ga0081455_10095050	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300006046\|Ga0066652_100099706	All Organisms → cellular organisms → Bacteria	2340	Open in IMG/M
3300006049\|Ga0075417_10020796	All Organisms → cellular organisms → Bacteria → Acidobacteria	2611	Open in IMG/M
3300006796\|Ga0066665_11363717	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300006854\|Ga0075425_100437724	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300006854\|Ga0075425_100474493	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300006871\|Ga0075434_102465349	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300006880\|Ga0075429_100109225	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300006904\|Ga0075424_100823020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300006904\|Ga0075424_101336897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300006904\|Ga0075424_101747838	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300006914\|Ga0075436_100188920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1457	Open in IMG/M
3300006953\|Ga0074063_14263547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1567	Open in IMG/M
3300006969\|Ga0075419_10240167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300009012\|Ga0066710_100460207	All Organisms → cellular organisms → Bacteria → Acidobacteria	1909	Open in IMG/M
3300009094\|Ga0111539_10015851	All Organisms → cellular organisms → Bacteria → Proteobacteria	9362	Open in IMG/M
3300009094\|Ga0111539_10165335	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300009094\|Ga0111539_10616235	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300009137\|Ga0066709_100193461	All Organisms → cellular organisms → Bacteria → Acidobacteria	2662	Open in IMG/M
3300009147\|Ga0114129_10782409	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1219	Open in IMG/M
3300009156\|Ga0111538_10119018	All Organisms → cellular organisms → Bacteria	3354	Open in IMG/M
3300009162\|Ga0075423_12943046	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300009176\|Ga0105242_10840452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	913	Open in IMG/M
3300009176\|Ga0105242_12149099	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300010046\|Ga0126384_12202573	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300010362\|Ga0126377_11028457	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300010371\|Ga0134125_12379405	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300012482\|Ga0157318_1032868	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300012500\|Ga0157314_1025461	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300012501\|Ga0157351_1005540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1016	Open in IMG/M
3300012506\|Ga0157324_1000876	All Organisms → cellular organisms → Bacteria → Acidobacteria	1532	Open in IMG/M
3300012948\|Ga0126375_10998207	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300012951\|Ga0164300_10077467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300012989\|Ga0164305_10314780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300014326\|Ga0157380_10442514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300014326\|Ga0157380_11002681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	869	Open in IMG/M
3300014969\|Ga0157376_10847708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	929	Open in IMG/M
3300015371\|Ga0132258_10152181	All Organisms → cellular organisms → Bacteria → Acidobacteria	5551	Open in IMG/M
3300015371\|Ga0132258_10978348	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300015371\|Ga0132258_11040183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2070	Open in IMG/M
3300015372\|Ga0132256_100877619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300015372\|Ga0132256_103078345	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300015373\|Ga0132257_101012670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300015373\|Ga0132257_101188225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300015374\|Ga0132255_104417312	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300015374\|Ga0132255_104930119	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300018067\|Ga0184611_1026586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1826	Open in IMG/M
3300018072\|Ga0184635_10021753	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
3300018073\|Ga0184624_10261381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300018074\|Ga0184640_10512005	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300018081\|Ga0184625_10097032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1519	Open in IMG/M
3300018082\|Ga0184639_10474167	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300020005\|Ga0193697_1005638	All Organisms → cellular organisms → Bacteria → Acidobacteria	3065	Open in IMG/M
3300025901\|Ga0207688_10361870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	895	Open in IMG/M
3300025907\|Ga0207645_10726900	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300025918\|Ga0207662_10320678	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300025923\|Ga0207681_10006360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	7252	Open in IMG/M
3300025923\|Ga0207681_11397917	Not Available	587	Open in IMG/M
3300025934\|Ga0207686_10639081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	841	Open in IMG/M
3300025936\|Ga0207670_10701940	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300026075\|Ga0207708_10182176	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300026088\|Ga0207641_10000519	All Organisms → cellular organisms → Bacteria → Acidobacteria	43225	Open in IMG/M
3300026118\|Ga0207675_102463532	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300027821\|Ga0209811_10007409	All Organisms → cellular organisms → Bacteria → Acidobacteria	3513	Open in IMG/M
3300027873\|Ga0209814_10268037	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300027907\|Ga0207428_10079591	All Organisms → cellular organisms → Bacteria → Acidobacteria	2562	Open in IMG/M
3300027907\|Ga0207428_10904972	Not Available	623	Open in IMG/M
3300027909\|Ga0209382_11317156	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300028380\|Ga0268265_11113331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300028381\|Ga0268264_10189188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1875	Open in IMG/M
3300028381\|Ga0268264_12227522	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300031538\|Ga0310888_10690035	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300031562\|Ga0310886_10628280	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300031716\|Ga0310813_10235913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1516	Open in IMG/M
3300033412\|Ga0310810_10248350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1959	Open in IMG/M
3300034354\|Ga0364943_0277485	All Organisms → cellular organisms → Bacteria → Acidobacteria	630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.05%
Environmental	Environmental	44.95%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.05%
Terrestrial	Environmental → Terrestrial	39.45%
Aquatic	Environmental → Aquatic	5.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.02%
Sediment	Environmental → Aquatic → Sediment	5.50%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.60%
Loam	Environmental → Terrestrial → Soil → Loam	13.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.50%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	7.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.92%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1057476393	3300000364	Soil	VGPRTSLKTLQQVSQCRERDAXVAPALQPLXAERFAGVLRRVSFFVATPLLAVGVLLTQLVTATHPLRSAAEDVESAASIDLFRVPLDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQLPRLGSPKS*
F24TB_111515101	3300000550	Soil	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVKNVESAASIDLFGAPLDPAEGEPNEDEATDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0062590_1001875302	3300004157	Soil	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0062595_1000852752	3300004479	Soil	VAPALQPLLAERFAGVLRRVSFFVATPLLAVGVLLTQLVTATHPLRSAAEDVESAASIDLFRVPLDPAEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQVPRLGSPKS*
Ga0062594_1001645413	3300005093	Soil	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAASEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0066809_101939051	3300005168	Soil	MLRRISSLVAILLIAFGALLTQLVTATHSVHAAVDDVESAASNHPFHVPPDPVEGEPNEDEAMDMYGNRVTPAVATYQLDDAGTLYELHSPQTQLPRLGSPKS*
Ga0065705_101219642	3300005294	Switchgrass Rhizosphere	MLRRVGFFVATLLLAVGALLTPHLVTATHPAHSAVENVESAASIDLFGAPLDPVEGEPNEDEATDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0065705_111445761	3300005294	Switchgrass Rhizosphere	SKTSFKTLQQVSQRRKRDRRVALALQTLRAERFARMLSRVGFVVATPLLAVGALLTPPLVTATHPVHAAVEDVESAAATEVFGVPLVPVEGEPNEDETTDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0065707_103805992	3300005295	Switchgrass Rhizosphere	MLRRVSFFVATLLLAVGALLTQLVTATHPVHSAVEDVESAASPDPFRVPPDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0070690_1005997482	3300005330	Switchgrass Rhizosphere	RDARVAPALQPLHVERLARMLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0070690_1016128532	3300005330	Switchgrass Rhizosphere	MLRRVSFFVATPLLAVGVLLTQLVTATHPLRSAAEDVESAASIDLFRVPPDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQ
Ga0066388_1008687461	3300005332	Tropical Forest Soil	MLRRFGFLVATPLLAVGALLTPQLVTATYPVHAAAEAVDSAASTDLFDIPLDPVEGEPNEDEVTDVLGNRVTPAVATYQFDAAGSLYELHSPQTQLPRLGSPKS*
Ga0066388_1036231432	3300005332	Tropical Forest Soil	MLRRFGFFVATPLLAVGALLTPQLVTATHPVHSAAEAVDSAASTDLFNLPLDPVEGEPNEDEVTDVFGNQVTPAVATYQFDATGSLYELHSPQTELPRLGSPKS*
Ga0068869_1010151581	3300005334	Miscanthus Rhizosphere	MLRRVSFFVAGVLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0068868_1001455423	3300005338	Miscanthus Rhizosphere	MLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0070689_1000191544	3300005340	Switchgrass Rhizosphere	MLRRVSFFVATPLLAVGVLLTQLVTATHPLRSAAEDVESAASIDLFRVPPDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQVPRLGSPKS*
Ga0070689_1009417882	3300005340	Switchgrass Rhizosphere	MLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHS
Ga0070689_1010089302	3300005340	Switchgrass Rhizosphere	MLSRVGFVVATPLFAVGALLTPHLVTATHPVHSAVEDVESAASEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0070675_1018960562	3300005354	Miscanthus Rhizosphere	LAVGALLTQLVTATHPVPAAVEDVESAASIDLFRVPPDPVEGESNEDEVIDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0070671_1017706591	3300005355	Switchgrass Rhizosphere	MLRRVSFFVATLLLAVGALLTQLVTATHPVPAAVEDVESAASIDLFRVPPDPVEGESNEDEVIDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0070674_1015804712	3300005356	Miscanthus Rhizosphere	MLRRVGFFVATPLLAVGALLTAPLVTTTHPVQPVEKAESAASIDLFGVPLDPVEGEPSEDAATDLYGNRVTPAVATYQLDAAGALYELHSPQTQLPRLGSPKS*
Ga0070673_1002970571	3300005364	Switchgrass Rhizosphere	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYE
Ga0070688_1013445722	3300005365	Switchgrass Rhizosphere	MLSRVGFVVATPLFAVGALLTPHLVTATHPVHSAVEDVESAASEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHS
Ga0073909_100400512	3300005526	Surface Soil	MLRRISFLVAILLIAFGALLTQLVTATHPVHAAVDDVESAASIHPFYVPPDPVEGEPNEDEPMDMYGNRVTPAVATYQLDDAGTLYELHSPQTQLPRLGSPKS*
Ga0070672_1004331021	3300005543	Miscanthus Rhizosphere	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHS
Ga0068857_1005886661	3300005577	Corn Rhizosphere	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAASEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQ
Ga0070702_1010774791	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLSRVGFVVATPLLAVGALLTPHLVTATHPVSSAVESAAAAAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0068859_1005322822	3300005617	Switchgrass Rhizosphere	MLRRVSFFVATPLLAVGVLLTQLVTATHPLRSAAEDVESAASIDLFRVPLDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQVPRLGSPKS*
Ga0066905_1003304411	3300005713	Tropical Forest Soil	VAPRLQPLRAERFARMLRRFGFFVAAPLLAVGALLTPQLVTATHPIHTAVEAVDSAASTDLFDTPLDPVEGEPNEDEVTDVFGNRLTPAVATYQFDATGSLYELHSPQTQLPRLGSPKS*
Ga0066905_1005176452	3300005713	Tropical Forest Soil	MLRRFGFFVATPLLAVGALLTPQLVTATHPVHSAAEAVDSAASTDLFESPLDSVEGEPNEDEMTDVFGNQVTPAVATYQFDATGSLYELHSPQTQLPRLGPPKS*
Ga0068861_1003725403	3300005719	Switchgrass Rhizosphere	LARMLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFDDVESAASIDPFRVPPDPVEGEPNEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0068863_1000134312	3300005841	Switchgrass Rhizosphere	MLRRVSFFVATLLLAVGALLTQLVTATHPVPAAVEDVESAASVDLFRVPPDPVEGESNEDEVIDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0068860_1005695232	3300005843	Switchgrass Rhizosphere	MLRRVSFFIATPLLVVGALLTQLVTATHPLRSAAEDVESAASIDLFRVPLDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQVPRLGSPKS*
Ga0081455_100950502	3300005937	Tabebuia Heterophylla Rhizosphere	MLRRFGFFVATPLLAVGALLTPQLVTATHPVHSAAKAVDSAASTDLFDLPLDPVEGEPNEDEVTDVFGNQVTPAVATYQFDGTGSLYELHSPQTQLPRLGSPKS*
Ga0066652_1000997063	3300006046	Soil	MLRRVSFFVATLLLGVGALLTPLVTATHPVLAAVEDVESAASIDLFRVPPAPVEGEPNEDEAIDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0075417_100207963	3300006049	Populus Rhizosphere	MLRRIGFFVATPLLAVGALLTPHLVTATHPAHSAVENVESAASIDLFGAPLDPVEGEPNEDEATDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0066665_113637172	3300006796	Soil	ARMLRRVGFFVATLVLAAGALLSPQLVTATHPVASTVEDEESAAALDPFRIARDVGEGETNEDESTDVYGNRVTAAVATYQLDATGTLYELHSPQTQLPRLGSPKS*
Ga0075425_1004377241	3300006854	Populus Rhizosphere	LLLAVGALLTQLVTATHPVHSTVEDVESAASIDLFRIPPDSVEGEPNEDEATDVYGNRVSPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0075425_1004744932	3300006854	Populus Rhizosphere	MLRRLGFFVATPLLAVAALLTPQLVTATYSVHSAAEAVDSAASTDLFDIPLDAVEGEPNEDEVTDVFGNQVTPAVATYQFDAAGSLYELHSPQTQLPRLGSPKS*
Ga0075434_1024653492	3300006871	Populus Rhizosphere	AVGALLTQLVTATHPVHSTVKAVESAASIDLFRIPPDSVEGEPNEDEATDVYGNRVSPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0075429_1001092253	3300006880	Populus Rhizosphere	MLSRVGFIVATPLLAVGALLTPHLVTATHPVHAAVGDVESAAATEVFGVPLAPVASELIEDEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0075424_1008230201	3300006904	Populus Rhizosphere	MLRRVGFFVATPLLAVGALLTPQLVTATHPVHSAAEAVDSAASTDLFDIQLDPVEGEPNEDEVTDVFGNRLTPAVATYQFDAAGSLYELHSPQTQLPRL
Ga0075424_1013368972	3300006904	Populus Rhizosphere	MLRRVSFFVATLSLAVGALLTQLVTATHPLRSATEDLESAASIDLFARPLDPVEGEPNEDDATDVYGNRVTPAVATYQLDPAGTLYELH
Ga0075424_1017478381	3300006904	Populus Rhizosphere	ATPLLAAGVLLTPQLVTATHPVASNVDDLESAAATDLGLPFHAVESETNEDEPTDVYGNRVTPAIATYQLDATGTLYELHSPRTQLPRLGSPES*
Ga0075436_1001889202	3300006914	Populus Rhizosphere	MLRRIGFFAATPLLAAGVLLTPQLVTATHPVASNVDDLESAAATDLGLPFHAVESETNEDEPTDVYGNRVTPAIATYQLDATGTLYELHSPRTQLPRLGSPES*
Ga0074063_142635471	3300006953	Soil	MFRRVSFFVAILLIAFGALLTQLVTATHPVHAAAEEVESGASIDPFSVPPDPVGGEPNEDEAMDMYGNRVTPAVATYQLDDAGTLYELHSPQTQ
Ga0075419_102401672	3300006969	Populus Rhizosphere	MLRRIGFFVATPLLAVGALLTPHLVTATHPVHAAVGDVESAAATEVFGVPLAPVASELIEDEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0066710_1004602072	3300009012	Grasslands Soil	MAPQLQLLRAESFARMLRRVGFFVATLVLAAGALLSPQLVTATHPVASTVEDEESAAALDPFRVPRDVAEGETNEDESTDVYGNRVTAAVATYQLDATGTLYELHSPQTQLPRLGSPKS
Ga0111539_100158518	3300009094	Populus Rhizosphere	MLSRVGFVVATPLFAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0111539_101653352	3300009094	Populus Rhizosphere	MLRRVGLFVATPLLAVGALLTPQLVTATHPVHSAVEDVESAASIDLFGVPPDPAKGEPNEDEATDMYGNRVSPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0111539_106162352	3300009094	Populus Rhizosphere	MLRRLGFFVATPLLAVAALLTPQLVTATYSVHSAAEAVDSAASTDLFDIPLDAVEGEPNEDEVTDVFGNQVTPAVAAYQFDAAGSLYELHSPQTQLPRLGSPKS*
Ga0066709_1001934613	3300009137	Grasslands Soil	MLRWVGFFVATPLLAASALLSPQLVTATHPVASTVEDEESAAALDPFRIARDVGEGETNEDESTDVYGNRVTAAVATYQLDATGTLYELHSPQTQLPRLGSPKS*
Ga0114129_107824092	3300009147	Populus Rhizosphere	MLRRFGFFVATPLLAVGALLTPQLVTATHPVHSVAEDVDSAASTDLFDIPLDPAEGEPNEDEVTDVFGNRVTPAVATYQFDAAGSLYEVHSPQTQVPRLGSPKS*
Ga0111538_101190181	3300009156	Populus Rhizosphere	MLRRVGLFVATPLLAVGALLTPQLVTATHPVHSAVEDVESAASIDLFGVPPDPAEGEPNEDEATDMYGNRVSPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0075423_129430461	3300009162	Populus Rhizosphere	KRDARVAPALQPLPAERFSRMLRRVSFFVAILLLAVGALLTQLVTATHPVHSTVEDVESAASIDLFRIPPDSVEGEPNEDEATDVYGNRVSPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0105242_108404521	3300009176	Miscanthus Rhizosphere	PLLAVGALLTAPLVTTTHPVQPVEKAESAASIDLFGVPLDPVEGEPSEDAATDLYGNRVTPAVATYQLDAAGALYELHSPQTQLPRLGSPKS*
Ga0105242_121490992	3300009176	Miscanthus Rhizosphere	MLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGMPYELHSPQTQLPRLGSPKS*
Ga0126384_122025732	3300010046	Tropical Forest Soil	AVGALLTPQLVTATHPIHTAVEAVDSAASADLFDTPLDPVEGEPNEDEVTDVFGNRLTPAVATYQFDATGSLYELHSPQTQLPRLGSPKS*
Ga0126377_110284572	3300010362	Tropical Forest Soil	MLRRFGFFVAAPLLAVGALLTPQLVTATHPIHTAVEAVDSAASTDLFDTPLDPVEGEPNEDEVTDVFGNQVTPAVATYQFDATGSLYELHSPQTQLPRLGSPKS*
Ga0134125_123794052	3300010371	Terrestrial Soil	MLSRVGFVVATPLLAVGALLTPHLVTATHPVSSAVEDVESAAAEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYHHDAAGTLYELHSPQTQLPRLGSPKS*
Ga0157318_10328682	3300012482	Arabidopsis Rhizosphere	MLRRISFLVALLLIAFGALLTQLVTATHPVHAAVDDVESAASIHPFHVPPDPVEGEPNEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0157314_10254612	3300012500	Arabidopsis Rhizosphere	RMLRRVSFFVAVLLLAVSALLTQLVTATHPVHAAVDDVESAASIHPFHVPPDPVEGEPNEDEAIDMYGNRVTPAVATYQLDDAGTLYELHSPQTQLPRLGSPKS*
Ga0157351_10055401	3300012501	Unplanted Soil	PLLAVGALLTSPLITASHPVHSVEGVESAALIDPFNVPLDPVEGEENDDEATDMYGNGVTPAVATYQLDATGSLYELHSPQTQLPRLGSPKS*
Ga0157324_10008763	3300012506	Arabidopsis Rhizosphere	MLRRISFLVALLLIAFGALLTQLVTATHPVHAAVDDVESAASIHPFHVPPDPVEGEPNEDEAIDMYGNRVTPAVATYQLDDAGTLYELHSPQTQLPRLGSPKS*
Ga0126375_109982071	3300012948	Tropical Forest Soil	TPLLAVGALLTPQLVTATHPVHSAAEAVDSAASTDLFDLPLDPVEGEPNEDEVTDVFGNQVTPAVATYQFDATGSLYELHSPQTELPRLGSPKS*
Ga0164300_100774672	3300012951	Soil	MLRRISFLVAILLIAFGALLTQLVTATHPVHAAVHDVESAASIHPFHVPPDPVEGEPNEDEAIDMYGNRVTPAVATYQRDDAGTLYELHSPQTQLPRLGSPKS*
Ga0164305_103147802	3300012989	Soil	MLRRISFLVAILLIAFGALLTQLVTATHPVHAAVHDVESAASIHPFYVPPDPVEGEPNEDEAMDMYGNRVTPAVATYQLDDAGTLYELHSPQTQLPRLGSPKS*
Ga0157380_104425141	3300014326	Switchgrass Rhizosphere	MLSRVGFVVATPLFAVGALLTPHLVTATHPVHSAVEDVESAATEVFGVPLAPVEGEPIEDTATDMYGNRVTPAVATYQLDAAGTLY
Ga0157380_110026812	3300014326	Switchgrass Rhizosphere	LLAVGALLTPHLVTATHPVSSAVESAAAAAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0157376_108477082	3300014969	Miscanthus Rhizosphere	ALQPLHVERLARMLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0132258_101521813	3300015371	Arabidopsis Rhizosphere	MLRRVGFFIATPLLAVGALLTSPLITASHPVHSVEGVESAALIDPFNVPLDPVEGEENDDEATDMYGNGVTPAVATYQLDATGSLYELHSPQTQLPRLGSPKS*
Ga0132258_109783482	3300015371	Arabidopsis Rhizosphere	MLRRVSFFVATPLLAVGALLTQLVTATHPLRSTAEDVESAASIDLFRVPLDSVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQLPRLGSPKS*
Ga0132258_110401833	3300015371	Arabidopsis Rhizosphere	MLRRVSFFVATLLLAVGALLTQLVTATHPVPAAVEDVESAASIDLFRVPPDPVEGESNEDEVIDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0132256_1008776193	3300015372	Arabidopsis Rhizosphere	LLAVGALLTSPLITASHPVHSVEGVESAALIDPFNVPLDPVEGEENDDEATDMYGNGVTPAVATYQLDATGSLYELHSPQTQLPRLGSPKS*
Ga0132256_1030783452	3300015372	Arabidopsis Rhizosphere	LTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0132257_1010126702	3300015373	Arabidopsis Rhizosphere	MLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRQGSPKS*
Ga0132257_1011882252	3300015373	Arabidopsis Rhizosphere	MLRRVSFFVATLLLAVGALLTQLVTATHPVPAAVEDVESAAAIDLFRVPPDPVEGESNEDEVIDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0132255_1044173122	3300015374	Arabidopsis Rhizosphere	LAVGALLTQLVTATHPLRSTAEDVESAASIDLFRVPLDSVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQLPRLGSPKS*
Ga0132255_1049301192	3300015374	Arabidopsis Rhizosphere	MLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATSQLDAAGTLYELHSPQTQLPRLGSPKS*
Ga0184611_10265862	3300018067	Groundwater Sediment	MLRRVGFFVATPLLAVGALLTAPLVTTTHQVQPVEKVESAASIDRFGVPLDPVEAEPNEDEATDVYGNRVTPAVATYQLDAAGALYELHSPQTQLPRLGSPKS
Ga0184635_100217533	3300018072	Groundwater Sediment	MLRRVGFFVATPLLAVGALLTAPLVTATHPLQSVEIVESAAPIDLFSVPLDPVEGEPNEGEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0184624_102613811	3300018073	Groundwater Sediment	MLRRVGFFVATPLLAVGALLTAPLFTTTHQVQPVEKVESAASIDRFGVPLDPVEAEPNEDEATDVYGNRVTPAVATYQLDAAGALYELHSPQTQLPRL
Ga0184640_105120051	3300018074	Groundwater Sediment	MLRRVGFFVATPLLAVGALLAAPLVTTTHPVQPVEKAESAASIDLFGVPLDPVEGEPSEDEATDVYGNRVTPAVATYQLDAAGALYELHSPQTQLPRLGSPKS
Ga0184625_100970321	3300018081	Groundwater Sediment	FPRMLRRVGFFVATPLLAVGALLTAPLVTTTHQVQPVEKVESAASIDRFDVPLDPVEAEPNEDEATDVYGNRVTPAVATYQLDAAGALYELHSPQTQLPRLGSPKS
Ga0184639_104741672	3300018082	Groundwater Sediment	MLRRVGFFVATPLLAVGALLTAPLVTATHPLQSVEIVESAAPIDLFSVPLDPVEGEPNEGEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPQS
Ga0193697_10056383	3300020005	Soil	MLRRVGFFVATPLLAVGALLAAPLVTTTHPVQPVEKAESAASIDLFGVPLDPVEGEPSEDAATDLYGNRVTPAVATYQLDAAGALYELHSPQTQLPRLGSPKS
Ga0207688_103618701	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TPLLAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207645_107269001	3300025907	Miscanthus Rhizosphere	RVAPALQTLRAERFARMLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAASEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207662_103206782	3300025918	Switchgrass Rhizosphere	MLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207681_100063604	3300025923	Switchgrass Rhizosphere	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207681_113979172	3300025923	Switchgrass Rhizosphere	MLRRVSFFVAVLLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLP
Ga0207686_106390811	3300025934	Miscanthus Rhizosphere	MLRRVGFFVATPLLAVGALLTAPLVTTTHPVQPVEKAESAASIDLFGVPLDPVEGEPSEDAATDLYGNRVTPAVATYQLDAAGALYELHSPQTQLPLLGSPKS
Ga0207670_107019402	3300025936	Switchgrass Rhizosphere	KTLQQVSQCRERDARVAPALQPLVAERFAGMLRRVSFFVATPLLAVGVLLTQLVTATHPLRSAAEDVESAASIDLFRVPPDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQVPRLGSPKS
Ga0207708_101821762	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MLSRVGFVVATPLFAVGALLTPHLVTATHPLRSAAEDVESAASIDLFRVPLDQVEGDPYEDEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207641_1000051929	3300026088	Switchgrass Rhizosphere	MLRRVSFFVATLLLAVGALLTQLVTATHPVPAAVEDVESAASVDLFRVPPDPVEGESNEDEVIDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207675_1024635321	3300026118	Switchgrass Rhizosphere	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGS
Ga0209811_100074092	3300027821	Surface Soil	MLRRISFLVAILLIAFGALLTQLVTATHPVHAAVHDVESAASIHPFYVPPDPVEGEPNEDEPMDMYGNRVTPAVATYQLDDAGTLYELHSPQTQLPRLGSPKS
Ga0209814_102680372	3300027873	Populus Rhizosphere	LRRIGFFVATPLLAVGALLTPHLVTATHPAHSAVENVESAASIDLFGAPLDPVEGEPNEDEATDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207428_100795912	3300027907	Populus Rhizosphere	MLSRVGFVVATPLFAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0207428_109049721	3300027907	Populus Rhizosphere	MLRRLGFFVATPLLAVAALLTPQLVTATYSVHSAAEAVDSAASTDLFDIPLDAVEGEPNEDEVTDVFGNQVTPAVATYQFDAAGS
Ga0209382_113171561	3300027909	Populus Rhizosphere	VRVAPALQPLRAERFARMLRRIGFFVATPLLAVGALLTPHLVTATHPAHSAVENVESAASIDLFGAPLDPVEGEPNEDEATDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPK
Ga0268265_111133312	3300028380	Switchgrass Rhizosphere	MLSRVGFVVATPLLAVGALLTPHLVTATHPVHSAVEDVESAATEAFGVPLAPVEGEPIEDAATDMYGNRVTPAVATYQLDAAGT
Ga0268264_101891881	3300028381	Switchgrass Rhizosphere	RVSFFVAGVLLAVSALLTQLVTATHPAHAAFGDVENAASIDPFRVPPDPVEGEANEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0268264_122275222	3300028381	Switchgrass Rhizosphere	MLRRVSFFIATPLLVVGALLTQLVTATHPLRSAAEDVESAASIDLFRVPLDQVEGDPNEDEATDVYGNRVTPAVATYQLDAAGMPYELHSPQTQLPRLGSPKS
Ga0310888_106900351	3300031538	Soil	MLRRVSFFVATLLLAVGALLTQLVTATHPVPAAVEDVESAAAIDLFRVPPDPVEGESNEDEVIDAYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0310886_106282802	3300031562	Soil	RFSRMLRRVSFFVATLLLAVGALLTQLVTATHPVPAAVEDVESAAAIDLFRVPPDPVEGESNEDEVIDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0310813_102359133	3300031716	Soil	MLRRVSFFVAVLLLAVGALLTQLVTATHPAHAAFDDVESAASIDPFRVPPDPVEGEPNEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0310810_102483501	3300033412	Soil	LLLAVGALLTQLVTATHPAHAAFDDVESAASIDPFRVPPDPVEGEPNEDEAIDRYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS
Ga0364943_0277485_259_570	3300034354	Sediment	MLRRVGFFVATPLLAVGALLTAPLITATHPVQSVEDVESAASIDLFDVPLDPVEGEPNEDEATDVYGNRVTPAVATYQLDAAGTLYELHSPQTQLPRLGSPKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088588

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences