NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088579

Metagenome / Metatranscriptome Family F088579

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088579
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 56 residues
Representative Sequence TDTPVVKPDTELKGFKVAKQIDPNDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG
Number of Associated Samples 95
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.59 %
% of genes near scaffold ends (potentially truncated) 92.66 %
% of genes from short scaffolds (< 2000 bps) 81.65 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(25.688 % of family members)
Environment Ontology (ENVO) Unclassified
(30.275 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.202 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.53%    β-sheet: 17.65%    Coil/Unstructured: 78.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF09969DUF2203 80.73
PF00730HhH-GPD 3.67
PF13419HAD_2 3.67
PF0563523S_rRNA_IVP 2.75
PF12804NTP_transf_3 1.83
PF00202Aminotran_3 1.83
PF030614HBT 1.83
PF01734Patatin 0.92
PF04542Sigma70_r2 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG01223-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 3.67
COG0177Endonuclease IIIReplication, recombination and repair [L] 3.67
COG1059Thermostable 8-oxoguanine DNA glycosylaseReplication, recombination and repair [L] 3.67
COG1194Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairsReplication, recombination and repair [L] 3.67
COG22313-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamilyReplication, recombination and repair [L] 3.67
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.92
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.92
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.92
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 0.92
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 0.92
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 0.92
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.92

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002561|JGI25384J37096_10177705All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium643Open in IMG/M
3300002562|JGI25382J37095_10058427All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1467Open in IMG/M
3300002568|C688J35102_118110447All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium530Open in IMG/M
3300002912|JGI25386J43895_10190971All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium514Open in IMG/M
3300003324|soilH2_10333383All Organisms → cellular organisms → Bacteria2177Open in IMG/M
3300004480|Ga0062592_101011458All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium760Open in IMG/M
3300004643|Ga0062591_100005932All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.4719Open in IMG/M
3300005180|Ga0066685_10765262All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium657Open in IMG/M
3300005186|Ga0066676_10133746All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1543Open in IMG/M
3300005206|Ga0068995_10005507All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1566Open in IMG/M
3300005445|Ga0070708_100090344All Organisms → cellular organisms → Bacteria2787Open in IMG/M
3300005446|Ga0066686_10014162All Organisms → cellular organisms → Bacteria4268Open in IMG/M
3300005451|Ga0066681_10155214All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300005468|Ga0070707_100034738All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales4810Open in IMG/M
3300005471|Ga0070698_100525434All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1122Open in IMG/M
3300005536|Ga0070697_100521560All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1040Open in IMG/M
3300005553|Ga0066695_10010379All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales4852Open in IMG/M
3300005554|Ga0066661_10397349All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300006046|Ga0066652_101563047All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium608Open in IMG/M
3300006797|Ga0066659_10330867All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1174Open in IMG/M
3300006797|Ga0066659_11671211All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium536Open in IMG/M
3300006844|Ga0075428_101244159All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300006847|Ga0075431_100153990All Organisms → cellular organisms → Bacteria2366Open in IMG/M
3300006871|Ga0075434_100088946All Organisms → cellular organisms → Bacteria3090Open in IMG/M
3300006871|Ga0075434_101710964All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium637Open in IMG/M
3300006876|Ga0079217_10859628All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium640Open in IMG/M
3300006914|Ga0075436_100180554All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300006914|Ga0075436_100361010All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1048Open in IMG/M
3300007076|Ga0075435_100947792All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300007265|Ga0099794_10230759All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium952Open in IMG/M
3300007788|Ga0099795_10285814All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium721Open in IMG/M
3300009038|Ga0099829_10885225All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium741Open in IMG/M
3300009089|Ga0099828_10698886All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium911Open in IMG/M
3300009100|Ga0075418_10630223All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1154Open in IMG/M
3300009143|Ga0099792_10790568All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium621Open in IMG/M
3300009147|Ga0114129_10704186All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300009147|Ga0114129_11211920All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300009162|Ga0075423_11505427All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium722Open in IMG/M
3300010159|Ga0099796_10333493All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium650Open in IMG/M
3300010301|Ga0134070_10006634All Organisms → cellular organisms → Bacteria3561Open in IMG/M
3300010304|Ga0134088_10395880All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium673Open in IMG/M
3300010320|Ga0134109_10106043All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium982Open in IMG/M
3300010320|Ga0134109_10111655All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium959Open in IMG/M
3300010320|Ga0134109_10349430All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium581Open in IMG/M
3300010323|Ga0134086_10212944All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium725Open in IMG/M
3300010335|Ga0134063_10258562All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium830Open in IMG/M
3300010360|Ga0126372_11629763All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium685Open in IMG/M
3300010364|Ga0134066_10181337All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium685Open in IMG/M
3300010396|Ga0134126_11775378All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium676Open in IMG/M
3300011120|Ga0150983_11956257All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium597Open in IMG/M
3300011269|Ga0137392_11065889All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium663Open in IMG/M
3300011402|Ga0137356_1046950All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium810Open in IMG/M
3300011445|Ga0137427_10209674All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium811Open in IMG/M
3300012140|Ga0137351_1046478All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium613Open in IMG/M
3300012206|Ga0137380_10666931All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium905Open in IMG/M
3300012208|Ga0137376_11226409All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium639Open in IMG/M
3300012210|Ga0137378_10797833All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium856Open in IMG/M
3300012212|Ga0150985_116706683All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium606Open in IMG/M
3300012351|Ga0137386_10284511All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1190Open in IMG/M
3300012355|Ga0137369_10110844All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2234Open in IMG/M
3300012359|Ga0137385_11406011All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium561Open in IMG/M
3300012361|Ga0137360_11545356All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium568Open in IMG/M
3300012362|Ga0137361_10818563All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium847Open in IMG/M
3300012393|Ga0134052_1217697All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium511Open in IMG/M
3300012400|Ga0134048_1295110All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium528Open in IMG/M
3300012582|Ga0137358_10166122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1504Open in IMG/M
3300012922|Ga0137394_10651917All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium888Open in IMG/M
3300012922|Ga0137394_10728664All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium834Open in IMG/M
3300012925|Ga0137419_10484907All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium979Open in IMG/M
3300012927|Ga0137416_10152895All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1808Open in IMG/M
3300012927|Ga0137416_11389205All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium636Open in IMG/M
3300012955|Ga0164298_11412279All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes539Open in IMG/M
3300012976|Ga0134076_10259738All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium743Open in IMG/M
3300014866|Ga0180090_1033040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium842Open in IMG/M
3300014883|Ga0180086_1009695All Organisms → cellular organisms → Bacteria2016Open in IMG/M
3300015052|Ga0137411_1147458All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1924Open in IMG/M
3300015054|Ga0137420_1379530All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4856Open in IMG/M
3300015054|Ga0137420_1468967All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4330Open in IMG/M
3300015241|Ga0137418_11263345All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium516Open in IMG/M
3300017656|Ga0134112_10401272All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium567Open in IMG/M
3300017659|Ga0134083_10204896All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium815Open in IMG/M
3300017659|Ga0134083_10348940All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium636Open in IMG/M
3300018068|Ga0184636_1019001All Organisms → cellular organisms → Bacteria2088Open in IMG/M
3300018068|Ga0184636_1323674All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300018071|Ga0184618_10180237All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium876Open in IMG/M
3300018077|Ga0184633_10024586All Organisms → cellular organisms → Bacteria2993Open in IMG/M
3300018482|Ga0066669_10094283All Organisms → cellular organisms → Bacteria2058Open in IMG/M
3300018482|Ga0066669_11711990All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes578Open in IMG/M
3300019360|Ga0187894_10044503All Organisms → cellular organisms → Bacteria2673Open in IMG/M
3300019882|Ga0193713_1009282All Organisms → cellular organisms → Bacteria3003Open in IMG/M
3300020004|Ga0193755_1003853All Organisms → cellular organisms → Bacteria4776Open in IMG/M
3300020170|Ga0179594_10006677All Organisms → cellular organisms → Bacteria3025Open in IMG/M
3300020170|Ga0179594_10426138All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium504Open in IMG/M
3300021344|Ga0193719_10434790All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium536Open in IMG/M
3300026075|Ga0207708_10672158All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium883Open in IMG/M
3300026523|Ga0209808_1290843All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium525Open in IMG/M
3300026548|Ga0209161_10455376All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium563Open in IMG/M
3300026940|Ga0207521_104109All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium532Open in IMG/M
3300027036|Ga0207467_1022560All Organisms → cellular organisms → Bacteria → Proteobacteria538Open in IMG/M
3300027842|Ga0209580_10429650All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium658Open in IMG/M
3300027903|Ga0209488_10786564All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium675Open in IMG/M
3300027949|Ga0209860_1051416All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium546Open in IMG/M
3300027991|Ga0247683_1008864All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium854Open in IMG/M
3300028293|Ga0247662_1092263All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium549Open in IMG/M
3300028715|Ga0307313_10286156All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium513Open in IMG/M
3300028793|Ga0307299_10217548All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium718Open in IMG/M
3300031421|Ga0308194_10238431All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes605Open in IMG/M
3300031720|Ga0307469_11824202All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium588Open in IMG/M
3300031720|Ga0307469_11835113All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium586Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil25.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil12.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.09%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.59%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.59%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.59%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.83%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.92%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.92%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.92%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.92%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.92%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005206Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011402Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012140Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012400Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300014883Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10DEnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026940Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027036Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027949Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027991Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24EnvironmentalOpen in IMG/M
3300028293Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25384J37096_1017770523300002561Grasslands SoilLKGFQLAKQLDAADHHIRATIVVLNGDKRVVGFIPHPEEIQGIVVV*
JGI25382J37095_1005842713300002562Grasslands SoilHDPTDCSAADHARTDTPIVKPDTELTGFKIAKQVDATDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG*
C688J35102_11811044713300002568SoilELKGFTVAKQIDPNDHHVRSTIVVLNGDKKVVGFIPHPEEVQGVVVIG*
JGI25386J43895_1019097113300002912Grasslands SoilELKGFKIAKQVDATDHHIRSTIVVLNGDKKVVGFIPHPEEVQGIVVG*
soilH2_1033338353300003324Sugarcane Root And Bulk SoilARTDTPVVKPETELKGFTVAKQLDPTDHHVRATIVVLNGDKKVVGFIPHPEEVQGIVFA*
Ga0062592_10101145813300004480SoilDHARTDTPVVKPETELNGFKVAKQLDPTDHHVRATIVVLEGDKKVVGFIPHPEEVPGIVFA*
Ga0062591_10000593283300004643SoilKPETELNGFKVAKQLDPTDHHVRATIVVLEGDKKVVGFIPHPEEVPGIVFA*
Ga0066685_1076526223300005180SoilLKGYKVAKQLDPTDHHVRSTIVVLNGDKRVVGFIPHPEEVQGIVID*
Ga0066676_1013374643300005186SoilPTDCSAADHARTDTPVVKPDTELKGYKVAKQLDPSDHHVRSTIVVLNGDKRVVGFIPHPEEVQGIVID*
Ga0068995_1000550743300005206Natural And Restored WetlandsDTELKGYRVARQPDPSDHHVRSTIVVVNGDKKVVGFIPHPEEIDGILIQ*
Ga0070708_10009034413300005445Corn, Switchgrass And Miscanthus RhizosphereEQELQGYKLSKQLDPDDHHVRSTMVVVDEKDRVVGFIPHPEEIQGIVIG*
Ga0066686_1001416213300005446SoilVVRPETELKGYKVAKQLDPTDHHVRSTIVVLNGEKKVVGFIPHPEEIDGIQIQE*
Ga0066681_1015521443300005451SoilVVKPDTEMKGFKLARQLDSNDHHVRSTIVVLNGDKRVVGFIPHPEDVQGVVVG*
Ga0070707_10003473813300005468Corn, Switchgrass And Miscanthus RhizosphereGFKIAKQVDATDHHVRSTIVVLNGDKKVVGFIPHPEEVQGIVVG*
Ga0070698_10052543413300005471Corn, Switchgrass And Miscanthus RhizosphereLKGYKHTKPADEHDSHVRATIVVVDKDRRVVGFIPHPEEIAGISIA*
Ga0070697_10052156033300005536Corn, Switchgrass And Miscanthus RhizosphereHMRTDTVVVRPEQELQGYKLSKQLDPDDHHVRSTMVVVDEKDRVVGFIPHPEEIQGIVIG
Ga0066695_1001037983300005553SoilLKGFKVGRQIDPTDHHVRSTIVVLNGDKKVVGFIPHPEEVQGVVVV*
Ga0066661_1039734933300005554SoilHDPTDCSAADHARTDTPIVKPETELRGFKVAKQIDPADHHVRSTIVVLNGDKKVVGFIPHPEEVQGIVVV*
Ga0066652_10156304723300006046SoilPVVKPETELKGYKVPKQADHHHRTTIVVVDGDKRVVGFIPHPEEVQGIVIAS*
Ga0066659_1033086713300006797SoilKPDTELKGYKVAKQLDPTDHHVRSTIVVLNGDKRVVGFIPHPEEVQGIVVD*
Ga0066659_1167121123300006797SoilDTELQGYRLPKQLDPADHHVRATIVVVDGAKRVVGFIPHPEEIEGIVIS*
Ga0075428_10124415913300006844Populus RhizosphereDCAVQDHARTDTPVVKPDTDLKGYKVRQDNDHHVRTTIVVIDGDKRVVGFIPHPEEVQGIVIAA*
Ga0075431_10015399053300006847Populus RhizospherePTDCSAADHARTDTPVVKPDTELNGYKVARQLDPTDHHVRSTIVVVDGNKKVVGFIPHPEEVQGIVID*
Ga0075434_10008894613300006871Populus RhizosphereKPDTELKGFTVAKQPDPTDHHIRSTIVVLDGNKKVVGFIPHPEDVQGVVIK*
Ga0075434_10171096413300006871Populus RhizosphereKPDTELKGFKVAKQIDSADHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG*
Ga0079217_1085962823300006876Agricultural SoilSAADHARTDTPVVIPEQDLRGYKVAKQLDPTDHHVRSTIVVVDGGKKVVGFIPHPEEVQGIIVQ*
Ga0075436_10018055413300006914Populus RhizosphereLRQDTAVVAPETELKGYKLTKPADEHDSHVRATIVVVDKDRRVVGFIPHPEEIAGISIA*
Ga0075436_10036101033300006914Populus RhizosphereVKPDTELKGFTVAKQPDPTDHHIRSTIVVLDGDKKVVGFIPHPEDVQGVVIK*
Ga0075435_10094779213300007076Populus RhizosphereELKGYKLAKPSDTHDTHVRATIVVVDKDRKVVGFIPHPEEVAGISL*
Ga0099794_1023075913300007265Vadose Zone SoilSPDTELKGYRLPKQLDPADHHVRATIVVVDKDRRVVGFIPHPEEVQGIVIA*
Ga0099795_1028581433300007788Vadose Zone SoilRTDTPVVKPDTEMKGFKLARQLDSNDHHVRSTIVVVNGDKKVVGFIPHPEDVQGVVVG*
Ga0099829_1088522513300009038Vadose Zone SoilARTDTALVGPETELSGYRLQKQPDASDHHVRATLVVVDKGRKVVGFIPHPEEIRGIVIE*
Ga0099828_1069888633300009089Vadose Zone SoilVVAPETELKGYKLTKPADEHDSHVRATIVVVDKARRVVGFIPHPEEVAGIVVA*
Ga0075418_1063022333300009100Populus RhizosphereGQGHDPSDCAVQDHARTDTPVVKPDTDLKGYKVRQDNDHHVRTTIVVVDTDNRVVGFIPHPEEIAGVVIG*
Ga0099792_1079056813300009143Vadose Zone SoilTELKGYKLTKPADEHDSHVRATIVVVDKARRVVGFIPHPEEVAGIVVA*
Ga0114129_1070418633300009147Populus RhizosphereGHDPKECQAEDHMRTDTPVVSPETEMEGYKLTKQLDATDHHIRATIVVIDKNKKVVGFIPHPEEIQGILIG*
Ga0114129_1121192033300009147Populus RhizosphereGHDPKECQAEDHMRTDTPVVSPETEMEGYKLTKQLDAMDHHIRATIVVIDSNRKVVGFIPHPEEIQGILIG*
Ga0075423_1150542733300009162Populus RhizosphereKGFKIAKQVDPNDHHVRSTIVVLNGDRKVVGFIPHPEEVQGIVVS*
Ga0099796_1033349313300010159Vadose Zone SoilRTDTPVVTPDTDLKGYKVSQDTDHHVRTTIVVVDGDKRVVGFIPHPEEVEGIRIGT*
Ga0134070_1000663473300010301Grasslands SoilTDCSAADHARTDTPVVKPDTELKGFKVAKQLDPNDHHVRSTIVVLNGEKKVVGFIPHPEDVQGLVFD*
Ga0134088_1039588033300010304Grasslands SoilDHVRTDTPVVKPDTELRGFKVAKQIDPNDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG*
Ga0134109_1010604313300010320Grasslands SoilTPVVKPDTEMKGFKLAKQLDSNDHHVRSTIVVLNGDKKVVGFIPHPEDVQGVVVG*
Ga0134109_1011165513300010320Grasslands SoilPTVEPETELRGFKVAKRPDPTDHHVRSTIVVLNSDKKVVGFISRPEDVQGIVIQ*
Ga0134109_1034943013300010320Grasslands SoilDTEMKGYKVAKQLDASDHHVRSTIVVLNGDQKVVGFIPHPEEIQGIVVG*
Ga0134086_1021294413300010323Grasslands SoilGHDPTDCSAADHARTDTPVVKPDTELKGYKVAKQLDPSDHHVRSTIVVLDGDKRVVGFIPHPEEVQGIVID*
Ga0134063_1025856213300010335Grasslands SoilDHARTDTPVVKPDTELKGFKVAKQIDPADHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG*
Ga0126372_1162976323300010360Tropical Forest SoilEHMRTDTIVVRTEQELSGYRMAKQLDPDDHHVRSTIVVVDGQNRVMGFIPHPEAIEGILIN*
Ga0134066_1018133733300010364Grasslands SoilTDTPIVKPETELKGFRVAKQPDPTDHHVRSTIVVLNGDKKVVGLIPHPEEVQGIVFQ*
Ga0134126_1177537813300010396Terrestrial SoilDPTDCSAADHARTDTPVVQPDTELRGYRVAKQPDPTDHHIRSTIVVVNADQRVVGFIPHPEEIDGIQIAP*
Ga0150983_1195625713300011120Forest SoilEMKGFKMKKQLDSADHHIRATIVVVDATKRVVGFIPHPEEVAGIVAT*
Ga0137392_1106588913300011269Vadose Zone SoilDPTDCSAADHARTDTPIVKPETELKGFKIAKQVDATDHHVRSTIVVLNGDKRVVGFIPHPEEVQGIVVA*
Ga0137356_104695033300011402SoilAGYNLPKQLDATDHHVRATIVVVDGDKKVVGFIPHPEEVSGIVIG*
Ga0137427_1020967413300011445SoilQPETDLKGFRIAKQLDPGDHHVRSTIVVVNGDKKVVGFIPHPEEIQGIVVT*
Ga0137351_104647823300012140SoilHDPTDCSAADHARTDTPIVQPETDLKGFRIAKQLDPGDHHVRSAIVVVNGDKKVVGFIPHPEEIQGIVVT*
Ga0137380_1066693113300012206Vadose Zone SoilKGFKLAKQLDPNDHHVRSTIVVVNGDKKVVGFIPHPEEIQGVVVG*
Ga0137376_1122640923300012208Vadose Zone SoilVVKPDTEMKGFKVAKQLDPNDHHVRSTIVVLNGDKKVVGFIPHPEEVQGVVVV*
Ga0137378_1079783313300012210Vadose Zone SoilDTEMKGFKLARQLDSNDHHVRSTIVVVNGDKKVVGFIPHPEDVQGVVVG*
Ga0150985_11670668313300012212Avena Fatua RhizosphereSAADHARTDTPIVKPETELKGFRVAKQPDPTDHHVRSTIVVLNGDKKVVGFIPHPEEVQGIVFQ*
Ga0137386_1028451113300012351Vadose Zone SoilVKPNTEMKGFKLAKQLDSNDHHVRSTIVVVNGDKKVVGFIPHPEDVQGIVVA*
Ga0137369_1011084413300012355Vadose Zone SoilHARTDTPIVRPETELKGFKIAKQIDPGDHHVRSTIVVLNGDKTVVGFIPHPEEVQGVVVA
Ga0137385_1140601123300012359Vadose Zone SoilGFKIAKQIDPGDHHVRSTIVVLNGDKTVVGFIPHPEEVQGVVVA*
Ga0137360_1154535623300012361Vadose Zone SoilTDTPVVKPDTELKGFQLAKQLDAADHHIRATIVVLNGDKRVVGFIPHPEEIQGIVVV*
Ga0137361_1081856313300012362Vadose Zone SoilIVKPDTELTGFKIAKQVDTTDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG*
Ga0134052_121769713300012393Grasslands SoilFKVAKQIDPNDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG*
Ga0134048_129511023300012400Grasslands SoilAKQIDPADHHVRSTIVVLNGDKKVVGFIPHPEEVQGVVVV*
Ga0137358_1016612213300012582Vadose Zone SoilTDTPIVKPDTELKGFKIAKQLDTGDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIEVG*
Ga0137394_1065191713300012922Vadose Zone SoilRGYRVAKQPDPTDHHIRSTIVVVNGDKRVVGFIPHPEEIDGIQIAS*
Ga0137394_1072866413300012922Vadose Zone SoilHARTDTPVVKPDMELEGYKLPKQLDPADHHVRATIVVVDQEKRVVGFIPHPEEVAGIVIG
Ga0137419_1048490713300012925Vadose Zone SoilTDTPVVSPDTELKGYRLPKQLDPTDHHVRATIVVVDKDRRVVGFIPHPEEVPGIVIS*
Ga0137416_1015289543300012927Vadose Zone SoilRTDTPVVKPDTELKGYKVAKQLDPSDHHVRSTIVVLNGDKRVVGFIPHPEEVQGIVVD*
Ga0137416_1138920523300012927Vadose Zone SoilFRVAKQLDPNDHHVRSTIVVLNGEKKVIGFIPHPEDVRGIVFD*
Ga0164298_1141227913300012955SoilMAVGVKPDTELRGFKVAKQPDPTDHHVRSTIVVLNGDKKVVGFIPHPEEVQGILIQ*
Ga0134076_1025973833300012976Grasslands SoilGFKVAKQIDPNDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG*
Ga0180090_103304013300014866SoilTDLKGFRIAKQLDPGDHHVRSTIVVVNGDKKVVGFIPHPEEIQGIVVT*
Ga0180086_100969513300014883SoilMGHDPTECSAQDHMRTDTPVVTPSTELAGYELSKQFDAADHHVRWTIVVVEKDKRVVGFIPHPEEIEGIVIG*
Ga0137411_114745813300015052Vadose Zone SoilPTDCSAADHARTDTTPIVKPDTELKGFKIAKQLDGGDHHVRSTIVVLDGDKKVVGFIPHPEEIPGIVVV*
Ga0137420_1379530103300015054Vadose Zone SoilMKGFKVAKQLDPNDHHVRSTIVVLNGDNKVVGFIPHPEEIQGVVVG*
Ga0137420_146896773300015054Vadose Zone SoilVQDHARTDTPVVKPETEFEGIQLPKQLDATDHHVRATIVVLDSDKRVLGFIPHPEEVQGIIIGS*
Ga0137418_1126334513300015241Vadose Zone SoilDTPVVKPDTELKGFKIAKQLDTTDHHVRSTIVVLNRDQTVVGFIPHPEEVQGIVVV*
Ga0134112_1040127213300017656Grasslands SoilHARTDTPVVKPETEMKGFTVAKQLDQNDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVIG
Ga0134083_1020489613300017659Grasslands SoilTDTPVVKPDTELKGFKVAKQIDPNDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG
Ga0134083_1034894023300017659Grasslands SoilDHARTDTPVVKPETELQGFKVAKQIDPNDHHVRSTIVVLNGDKKVVGFIPHPEEVQGIVV
Ga0184636_101900113300018068Groundwater SedimentELTGYRLAKYPDPADHHIRATIVVVDQTKRVVGFIPHPEEITGIIIG
Ga0184636_132367413300018068Groundwater SedimentELTGYRLAKYPDPADHHIRATIVVVDQTKRVVGFIPHPEEIQGIIID
Ga0184618_1018023733300018071Groundwater SedimentVKPDTELKGFKVAKQIDPTDHHVRSTIVVLNGDKKVIGFIPHPEEIQGIEVG
Ga0184633_1002458613300018077Groundwater SedimentDHARTDTPVVKPETELKGYKVAKQLDPTDHHVRSTIVVVNDEKKVVGFIPHPEEVQGIIV
Ga0066669_1009428323300018482Grasslands SoilVVEPDTELQGYRVARQLDPNDHHVRSTIVVVNGGKKVIGFIPHPEEIQGIVIA
Ga0066669_1171199023300018482Grasslands SoilVKPDTEMKGFKLARQLDSNDHHVRSTIVVLNGDKRVVGFIPHPEDVQGVVVG
Ga0187894_1004450363300019360Microbial Mat On RocksAVVSPETEMKGYKLSKQLDATDHHIRATIVVIDNNRRVVGFISRPEEVAGIVIG
Ga0193713_100928213300019882SoilTDTPVVKPETELKGYKVPQDTDHHVRMTIVVIDGDKRVVGFIPHPEEIQGIVIAS
Ga0193755_100385313300020004SoilHDPSDCSAADHARTDTPVVKPDTEMKGFKLARQLDSNDHHVRSTIVVLNGDKKVVGFIPHPEDIQGVVVA
Ga0179594_1000667713300020170Vadose Zone SoilHARTDTPIVKPDTELKGFKIAKQLDTGDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIEVG
Ga0179594_1042613813300020170Vadose Zone SoilVVKPETELKGYKLPKQLDPGDHHVRATIVVIDADKRVLGFIPHPEEVPGIIIAP
Ga0193719_1043479023300021344SoilCSAADHARTDTPVVKPETELKGFRVAKQVDPSDHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG
Ga0207708_1067215833300026075Corn, Switchgrass And Miscanthus RhizospherePETELNGFKVAKQLDPTDHHVRATIVVLEGDKKVVGFIPHPEEVPGIVFA
Ga0209808_129084313300026523SoilDTPIVKPETELKGFKVAKQIDPADHHVRSTIVVLNGDKKVVGFIPHPEEVQGIVVV
Ga0209161_1045537613300026548SoilADHARTDTPVVKPDTELKGFKVAKQIDPADHHVRSTIVVLNGDKKVVGFIPHPEEIQGIVVG
Ga0207521_10410923300026940SoilADHARTDTPVVKPETELNGFKVAKQLDPTDHHVRATIVVLEGDKKVVGFIPHPEEVPGIVFA
Ga0207467_102256013300027036SoilDHARTDTPVVKPETELNGFKVAKQLDPTDHHVRATIVVLEGDKKVVGFIPHPEEVPGIVF
Ga0209580_1042965023300027842Surface SoilEMKGFKMKKQLDSADHHIRATIVVVDATKRVVGFIPHPEEVVGIVAT
Ga0209488_1078656413300027903Vadose Zone SoilRQDTAVVAPETELKGYKLTKPADEHDSHVRATIVVVDKARRVVGFIPHPEEVAGIVVA
Ga0209860_105141623300027949Groundwater SandDTPVVKPETELKGYKLPKQLDATDHHVRATIVVLDSDKRVLGFIPHPEEVQGIVIAP
Ga0247683_100886413300027991SoilHMRTDTVVVAPEQELEGFRVTKQLDPEDHHVRSTIVVADEKRRVVGFIPHPEEVQGILYG
Ga0247662_109226313300028293SoilGFRVTKQLDPEDHHVRSTIVVADEKRRVVGFIPHPEEVQGILYG
Ga0307313_1028615613300028715SoilDTELKGFKVAKQVDPADHHVRSTIVVLNGDKKVVGFIPHPEEIQGIMVG
Ga0307299_1021754823300028793SoilHDPSDCSVQDHARTDTPVVKPDTDLKGYKLAKPLDHHVRMTIVVVDGDKRVVGFIPHPEEIEGIRLEG
Ga0308194_1023843123300031421SoilVKPDTELKGYKVPQDTDHHVRTTIVVLDGDKRVVGFIPHPEEIQGIEVLHAG
Ga0307469_1182420223300031720Hardwood Forest SoilVVKPETEMSGYKVAKQLDPTDHHVRSTIVVLNGEKKVVGFIPHPEEIDGIQIQE
Ga0307469_1183511323300031720Hardwood Forest SoilHDPTDCSAADHARTDTPIVKPETELKGFKIAKQVDATDHHVRSTIVVLNGDKKVVGFIPHPEEVQGIVVG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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