NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F088553

Metagenome Family F088553

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088553
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 59 residues
Representative Sequence MKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPCQ
Number of Associated Samples 63
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 54.13 %
% of genes near scaffold ends (potentially truncated) 21.10 %
% of genes from short scaffolds (< 2000 bps) 77.06 %
Associated GOLD sequencing projects 45
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (73.394 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(72.477 % of family members)
Environment Ontology (ENVO) Unclassified
(78.899 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.495 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.60%    β-sheet: 22.81%    Coil/Unstructured: 38.60%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF08299Bac_DnaA_C 3.67
PF00940RNA_pol 1.83
PF05367Phage_endo_I 0.92
PF00476DNA_pol_A 0.92
PF14700RPOL_N 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 3.67
COG5108Mitochondrial DNA-directed RNA polymeraseTranscription [K] 1.83
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A73.39 %
All OrganismsrootAll Organisms26.61 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10030765All Organisms → Viruses → Predicted Viral2956Open in IMG/M
3300000101|DelMOSum2010_c10099952Not Available1208Open in IMG/M
3300004097|Ga0055584_100566371Not Available1185Open in IMG/M
3300005613|Ga0074649_1009964Not Available6830Open in IMG/M
3300006025|Ga0075474_10046560Not Available1477Open in IMG/M
3300006026|Ga0075478_10102709Not Available912Open in IMG/M
3300006027|Ga0075462_10019468All Organisms → Viruses → Predicted Viral2191Open in IMG/M
3300006027|Ga0075462_10229297Not Available554Open in IMG/M
3300006802|Ga0070749_10017701All Organisms → Viruses → Predicted Viral4540Open in IMG/M
3300006802|Ga0070749_10083045All Organisms → cellular organisms → Bacteria1911Open in IMG/M
3300006802|Ga0070749_10101527Not Available1700Open in IMG/M
3300006802|Ga0070749_10110219All Organisms → Viruses → Predicted Viral1622Open in IMG/M
3300006802|Ga0070749_10562929Not Available617Open in IMG/M
3300006802|Ga0070749_10708914Not Available538Open in IMG/M
3300006810|Ga0070754_10028164All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium3173Open in IMG/M
3300006810|Ga0070754_10066345All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1856Open in IMG/M
3300006810|Ga0070754_10080854All Organisms → Viruses → Predicted Viral1639Open in IMG/M
3300006810|Ga0070754_10098833Not Available1445Open in IMG/M
3300006810|Ga0070754_10108603All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.1363Open in IMG/M
3300006810|Ga0070754_10157309Not Available1082Open in IMG/M
3300006810|Ga0070754_10178719Not Available999Open in IMG/M
3300006810|Ga0070754_10188137Not Available968Open in IMG/M
3300006810|Ga0070754_10190637Not Available960Open in IMG/M
3300006868|Ga0075481_10070494Not Available1319Open in IMG/M
3300006869|Ga0075477_10076297Not Available1458Open in IMG/M
3300006869|Ga0075477_10116622Not Available1134Open in IMG/M
3300006869|Ga0075477_10421079Not Available518Open in IMG/M
3300006874|Ga0075475_10026819Not Available2802Open in IMG/M
3300006916|Ga0070750_10013182All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium4314Open in IMG/M
3300006916|Ga0070750_10049804Not Available2032Open in IMG/M
3300006916|Ga0070750_10249839Not Available770Open in IMG/M
3300006916|Ga0070750_10416993Not Available558Open in IMG/M
3300006919|Ga0070746_10013946All Organisms → Viruses → Predicted Viral4506Open in IMG/M
3300006919|Ga0070746_10037513All Organisms → Viruses → Predicted Viral2577Open in IMG/M
3300006919|Ga0070746_10104808Not Available1407Open in IMG/M
3300006919|Ga0070746_10230140Not Available872Open in IMG/M
3300007234|Ga0075460_10231011Not Available622Open in IMG/M
3300007276|Ga0070747_1209870Not Available684Open in IMG/M
3300007344|Ga0070745_1069762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.1412Open in IMG/M
3300007345|Ga0070752_1122344All Organisms → Viruses → Predicted Viral1093Open in IMG/M
3300007538|Ga0099851_1312329Not Available553Open in IMG/M
3300007539|Ga0099849_1006765Not Available5206Open in IMG/M
3300007539|Ga0099849_1173949Not Available822Open in IMG/M
3300007640|Ga0070751_1252061Not Available670Open in IMG/M
3300008012|Ga0075480_10417058Not Available659Open in IMG/M
3300009001|Ga0102963_1456308Not Available501Open in IMG/M
3300009027|Ga0102957_1422110Not Available501Open in IMG/M
3300009438|Ga0115559_1035835Not Available2255Open in IMG/M
3300010297|Ga0129345_1089079Not Available1150Open in IMG/M
3300017749|Ga0181392_1186884Not Available599Open in IMG/M
3300017782|Ga0181380_1166137Not Available748Open in IMG/M
3300017824|Ga0181552_10037723All Organisms → Viruses → Predicted Viral2910Open in IMG/M
3300017824|Ga0181552_10333338Not Available740Open in IMG/M
3300018416|Ga0181553_10393397Not Available754Open in IMG/M
3300018420|Ga0181563_10283683Not Available975Open in IMG/M
3300018420|Ga0181563_10586344Not Available621Open in IMG/M
3300018420|Ga0181563_10659138Not Available579Open in IMG/M
3300018421|Ga0181592_11058865Not Available520Open in IMG/M
3300018424|Ga0181591_10424243Not Available985Open in IMG/M
3300018428|Ga0181568_11219094Not Available564Open in IMG/M
3300019938|Ga0194032_1012588Not Available901Open in IMG/M
3300021364|Ga0213859_10175993Not Available1000Open in IMG/M
3300021368|Ga0213860_10249652Not Available778Open in IMG/M
3300021957|Ga0222717_10137910Not Available1496Open in IMG/M
3300021958|Ga0222718_10229264Not Available998Open in IMG/M
3300021958|Ga0222718_10299838Not Available835Open in IMG/M
3300021959|Ga0222716_10000371Not Available38347Open in IMG/M
3300021959|Ga0222716_10177985All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1365Open in IMG/M
3300021960|Ga0222715_10131485Not Available1575Open in IMG/M
3300022050|Ga0196883_1007669Not Available1261Open in IMG/M
3300022050|Ga0196883_1031687All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.643Open in IMG/M
3300022057|Ga0212025_1010712All Organisms → Viruses1363Open in IMG/M
3300022065|Ga0212024_1032314Not Available891Open in IMG/M
3300022065|Ga0212024_1056872Not Available690Open in IMG/M
3300022071|Ga0212028_1034225Not Available932Open in IMG/M
3300022158|Ga0196897_1029478Not Available662Open in IMG/M
3300022167|Ga0212020_1041499Not Available779Open in IMG/M
3300022168|Ga0212027_1014151Not Available1096Open in IMG/M
3300022187|Ga0196899_1062261Not Available1186Open in IMG/M
3300022187|Ga0196899_1070146All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1095Open in IMG/M
3300022187|Ga0196899_1200498Not Available529Open in IMG/M
3300022928|Ga0255758_10104359All Organisms → Viruses → Predicted Viral1491Open in IMG/M
3300025630|Ga0208004_1044146All Organisms → Viruses → Predicted Viral1230Open in IMG/M
3300025641|Ga0209833_1093673Not Available883Open in IMG/M
3300025652|Ga0208134_1159520Not Available560Open in IMG/M
3300025653|Ga0208428_1014410Not Available2693Open in IMG/M
3300025653|Ga0208428_1042476All Organisms → Viruses → Predicted Viral1406Open in IMG/M
3300025671|Ga0208898_1004035All Organisms → Viruses8503Open in IMG/M
3300025671|Ga0208898_1048674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.1557Open in IMG/M
3300025671|Ga0208898_1066737Not Available1216Open in IMG/M
3300025671|Ga0208898_1098038Not Available898Open in IMG/M
3300025674|Ga0208162_1010076Not Available4019Open in IMG/M
3300025674|Ga0208162_1020697All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.2540Open in IMG/M
3300025751|Ga0208150_1125075Not Available827Open in IMG/M
3300025759|Ga0208899_1008278All Organisms → Viruses6017Open in IMG/M
3300025759|Ga0208899_1009930All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium5368Open in IMG/M
3300025759|Ga0208899_1034369Not Available2332Open in IMG/M
3300025759|Ga0208899_1107387Not Available1029Open in IMG/M
3300025759|Ga0208899_1183192Not Available682Open in IMG/M
3300025759|Ga0208899_1262448Not Available506Open in IMG/M
3300025769|Ga0208767_1003754Not Available10922Open in IMG/M
3300025769|Ga0208767_1054947Not Available1830Open in IMG/M
3300025769|Ga0208767_1252715Not Available549Open in IMG/M
3300025828|Ga0208547_1025934Not Available2291Open in IMG/M
3300025840|Ga0208917_1259650Not Available553Open in IMG/M
3300025853|Ga0208645_1236743Not Available619Open in IMG/M
3300025853|Ga0208645_1290487Not Available519Open in IMG/M
3300034374|Ga0348335_022662All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium2963Open in IMG/M
3300034418|Ga0348337_040415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.2001Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous72.48%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh9.17%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.50%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.83%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.83%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.83%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.83%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.83%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.92%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.92%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019938Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW8Nov16_MGEnvironmentalOpen in IMG/M
3300021364Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO304EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022928Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaGEnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1003076553300000101MarineLNLKGTAMKEFEVELSATTYRTFYITAESAEQAEEMAWDGLDEDEGISGAWKDNAKLESVEQCQ*
DelMOSum2010_1009995223300000101MarineLTLKGTAMKEFEVELSATTYRTFYVTAESAEQAEEMAWDGLDEDEGISGAWKDNAKLESVEQCQ*
Ga0055584_10056637123300004097Pelagic MarineMKEFEVEMSATTYRTFTVTAESLEEAEELAFEALDNDEEISGAWKDEARIVETKEITEE*
Ga0074649_1009964133300005613Saline Water And SedimentMKEFEVELKATTYRTFYVTAESKEEAEELAFHALDNDEEISGTWKDEARVSFIEPKSE*
Ga0075474_1004656043300006025AqueousMKQFEIELSATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDNAKLESIEPCQ*
Ga0075478_1010270943300006026AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWDALDEDEEISGAWKDNAKLESVEPTNN*
Ga0075462_1001946823300006027AqueousMKEFEVELKATTYRTFYVTAESREEAEELAFDALDNDEEISGTWKDEAKVNFIEPKDD*
Ga0075462_1022929713300006027AqueousMKEFEVELSATTYRTFYVTAESAEQAEEMAWEVLDEDEEISGAWKDSAKIESVEPCQSQYT*
Ga0070749_1001770123300006802AqueousMKEFEVELSATTYRTFYVTAESAEQAEEMAWDALDEDEEISGAWKDSAKLESVEECRSPNT*
Ga0070749_1008304563300006802AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWDALDDDEEISGAWKDNAKLESVEPTNN*
Ga0070749_1010152723300006802AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPCQ*
Ga0070749_1011021923300006802AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNN*
Ga0070749_1056292933300006802AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPCQ*
Ga0070749_1070891433300006802AqueousMKEFEVELSATTYRTFYVTAESAEQAEEMAWEVLDEDEEISGAWKDSAKLESVEPCQ*
Ga0070754_1002816423300006810AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEALDEDEEISGAWKDSAKLESVEPTCQ*
Ga0070754_1006634553300006810AqueousMKEFEIEMSATTYRTFTITAESVDEAEELAFEALDNDEEISGAWKDEARIVETKEITE*
Ga0070754_1008085433300006810AqueousMKEFEIEMSATTYRTFTVTAESLEEAEELAFYALDNDEEISGAWKDEARIVETKEITE*
Ga0070754_1009883353300006810AqueousMNLTLKGTAMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQ*
Ga0070754_1010860343300006810AqueousLNLKGTAMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQ*
Ga0070754_1015730923300006810AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWDALDEDEEISGAWKDSAKLESVEPTNN*
Ga0070754_1017871913300006810AqueousKMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPCQ*
Ga0070754_1018813723300006810AqueousMKEFEVELKATTYRTFYVTAESKEEAEELAFDALDNDEEISGTWKDEAMVSFIEPKND*
Ga0070754_1019063723300006810AqueousMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDNAKLESVEPCQ*QYT*
Ga0075481_1007049423300006868AqueousMNLTLKGTAMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPTNN*
Ga0075477_1007629723300006869AqueousMNLTLKGTAMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNN*
Ga0075477_1011662253300006869AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEALDEDEEISGAWKDSAKLESVE
Ga0075477_1042107913300006869AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQ*
Ga0075475_1002681913300006874AqueousTTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNN*
Ga0070750_1001318273300006916AqueousLNLKGTAMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPTNT*
Ga0070750_1004980463300006916AqueousLNLKGTAMKEFEVEMSATTYRTFTVTAESAEQAEEFAWEVLDNDEEISGAWKDSAKLESVEPCQ*
Ga0070750_1024983933300006916AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDSAKLESVEPCQ*
Ga0070750_1041699323300006916AqueousMKEFEVELSATTYRTFYVTAESAEQAEEMAWDALDEDEEISGAWKDSAKIESVEPCQSQYT*
Ga0070746_1001394673300006919AqueousMKEFEVELSATTYRTFTVTAESAEQAEEMAWDELFEDEEISEAWKDNAYITSVELCQ*
Ga0070746_1003751313300006919AqueousLNLKGTAMKEFEVELSATTYRTFYVTAESAEQAEEMAWDALDEDEEISGAWKDSAKIESVEPCQSQYT*
Ga0070746_1010480843300006919AqueousLNLKGTDMKEFEVELSATTYRTFYVTAESAEQAEEMAWEVLDEDEEISGAWKDSAKLESVEPCQ*
Ga0070746_1023014033300006919AqueousMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQ*
Ga0075460_1023101113300007234AqueousFILKVTNLNLKGTVMKEFEVELSATTYRTFYVTAESAEQAEELAWEVMDEDEEISGAWKDNAKLESVEPTNN*
Ga0070747_120987023300007276AqueousMKEFEVEISATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDSAKLESVEQCQ*
Ga0070745_106976233300007344AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNKPDLTK*
Ga0070752_112234433300007345AqueousMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDNAKLESVEPCQ*
Ga0099851_131232923300007538AqueousMKEFEVELKATTYRTFYVTAESREEAEELAFDALDNDEEISGTWKDEARVNFIEPKDD*
Ga0099849_100676573300007539AqueousMKEFEVELKATTYRTFYVTAESREEAEELAFDALDSDEEISGTWKDEAKVNFIEPKDD*
Ga0099849_117394913300007539AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEECQSPNT*
Ga0070751_125206113300007640AqueousVELSATTYRTFYITAESAEQAEELAWDALDEDEEISGAWKDNAKLESVEPTNN*
Ga0075480_1041705813300008012AqueousQFEIELSATTYRTFTITAESVDEAEELAFEALDNDEEISGAWKDEARIVETKEITE*
Ga0102963_145630813300009001Pond WaterMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPTCQEPST*
Ga0102957_142211013300009027Pond WaterMKEFEVELSATTYRTFYITAESAEQAEELAWEALDEDEEIRGSWKDSAKLESVEPTCQ*
Ga0115559_103583543300009438Pelagic MarineMKEFEVEISATTYRTFTITAESAEQAEEMAWNALDEDEEISGAWKDNAKLESVEQCQ*
Ga0129345_108907953300010297Freshwater To Marine Saline GradientMKEFEIELSATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDNAKLESVEECQ*
Ga0181392_118688413300017749SeawaterMKEFEVELKATTYRTFYVTAKNKEEAEELAFDALDNDEEISGTWKDEARVNFI
Ga0181380_116613723300017782SeawaterMKEFEVELKATTYRTFYVTAKNKEEAEELAFDALDNDEEISGTWKDEARVNFIEPKDD
Ga0181552_1003772373300017824Salt MarshMNLTLKGTVMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDDDEEISGAWKDSAKLESVEPTNN
Ga0181552_1033333813300017824Salt MarshLNLKGTAMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDSAKLESVEPTNN
Ga0181553_1039339723300018416Salt MarshMTMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGVWKDSAKLESVEPCQ
Ga0181563_1028368323300018420Salt MarshMKEFEVELSATTYRTFYVTAESAEQAEEMAWEVLDEDEEISGAWKDSAKLESVEPCQ
Ga0181563_1058634413300018420Salt MarshTAMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDNAKLESVEPTNN
Ga0181563_1065913833300018420Salt MarshAMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDSAKLESVEPCQ
Ga0181592_1105886523300018421Salt MarshLNLKGTAMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDNAKLESVEPCQ
Ga0181591_1042424323300018424Salt MarshMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDNAKLESVEPTNN
Ga0181568_1121909423300018428Salt MarshMNLTLKGTAMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDSAKLESVEPTNN
Ga0194032_101258813300019938FreshwaterMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPCQ
Ga0213859_1017599313300021364SeawaterMKEFEVELKATTYRTFYVTAESREEAEELAFDALDNDEEISGTWKDEAKVSFIEPKND
Ga0213860_1024965223300021368SeawaterMQEFEVELKATTYRTFYVTAESKEEAEELAFDALENDEEISGTWKDEARVNFIEPKND
Ga0222717_1013791033300021957Estuarine WaterMNLNWRRSDMKEFEIEMSATTYRTFTITAESLEDAEELAFHALDNDEEISGAWKDEARIVETKEITELCQ
Ga0222718_1022926433300021958Estuarine WaterMKEFEVELKATTYRTFYVTAKNKEEAEELAFHALDNDEEISGTWKDEARVNFIEPKNE
Ga0222718_1029983813300021958Estuarine WaterYRTFTITAESLEDAEELAFHALDNDEEISGAWKDEARIVETKEITELCQ
Ga0222716_10000371193300021959Estuarine WaterMKEFEIEMSATTYRTFTITAESLEDAEELAFHALDNDEEISGAWKDEARIVETKEITELC
Ga0222716_1017798543300021959Estuarine WaterMKEFEIELSATTYRTFYVTAESAERAEELAWDALDEDEEISGTWKDNAKLESVEEINRQL
Ga0222715_1013148553300021960Estuarine WaterLNLKGTAMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPCQ
Ga0196883_100766933300022050AqueousMKQFEIELSATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDNAKLESIEPCQ
Ga0196883_103168733300022050AqueousMKEFEIEMSATTYRTFTITAESVDEAEELAFEALDNDEEISGAWKDEARIVETKEITE
Ga0212025_101071213300022057AqueousELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNN
Ga0212024_103231423300022065AqueousMKEFEVELKATTYRTFYVTAESREEAEELAFDALDNDEEISGTWKDEAKVNFIEPKDD
Ga0212024_105687213300022065AqueousKGTAMKEFEVELSATTYRTFYVTAESAEQAEEMAWDALDEDEEISGAWKDSAKIESVEPCQSQYT
Ga0212028_103422523300022071AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWDALDEDEEISGAWKDNAKLESVEPTNN
Ga0196897_102947813300022158AqueousTDMKEFEVELSATTYRTFYITAESAEQAEELAWDALDDDEEISGAWKDNAKLESIEPCQ
Ga0212020_104149933300022167AqueousATTYRTFTITAESVDEAEELAFEALDNDEEISGAWKDEARIVETKEITE
Ga0212027_101415133300022168AqueousMKQFEIELSATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDNAKLESI
Ga0196899_106226133300022187AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNN
Ga0196899_107014633300022187AqueousMKEFEIEMSATTYRTFTVTAESLEEAEELAFYALDNDEEISGAWKDEARIVETKEITE
Ga0196899_120049823300022187AqueousMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPCQ
Ga0255758_1010435943300022928Salt MarshLNLKGTAMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDSAKLESVEPCQ
Ga0208004_104414633300025630AqueousMKEFEVELSATTYRTFYVTAESAEQAEEMAWDALDEDEEISGAWKDSAKIESVEPCQSQY
Ga0209833_109367323300025641Pelagic MarineMKEFEVEISATTYRTFTITAESAEQAEEMAWNALDEDEEISGAWKDNAKLESVEQCQ
Ga0208134_115952013300025652AqueousMKEFEVEISATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDSAKLESVEQCQ
Ga0208428_101441023300025653AqueousMNLTLKGTAMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPTNN
Ga0208428_104247653300025653AqueousLSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQXPST
Ga0208898_1004035133300025671AqueousLNLKGTDMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNN
Ga0208898_104867423300025671AqueousLNLKGTAMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNKPDLTK
Ga0208898_106673743300025671AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWDALDEDEEISGAWKDSAKLESVEPTN
Ga0208898_109803833300025671AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPCQ
Ga0208162_101007653300025674AqueousMKEFEVELKATTYRTFYVTAESREEAEELAFDALDSDEEISDTWKDEAKVNFIEPKDD
Ga0208162_102069743300025674AqueousMKEFEVELKATTYRTFYVTAESREEAEELAFDALDNDEEISGTWKDEARVNFIEPKDD
Ga0208150_112507533300025751AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKL
Ga0208899_100827873300025759AqueousLNLKGTAMKEFEVELSATTYRTFYVTAESAEQAEEMAWDALDEDEEISGAWKDSAKIESVEPCQSQYT
Ga0208899_100993083300025759AqueousLNLKGTAMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPTNT
Ga0208899_103436973300025759AqueousMNLTLKGTAMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQ
Ga0208899_110738733300025759AqueousMKEFEVKLCATTYRTFYVTAESAEQAEEMAWDELFEDEEISEAWKDNAYITSVELCQ
Ga0208899_118319223300025759AqueousMKEFEVELSATTYRTFYVTAESAEQAEEMAWEVLDEDEEISGAWKDNAKLESLEQCQ
Ga0208899_126244823300025759AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWDALDEDEEISGAWKDSAKLESVEPCQ
Ga0208767_100375433300025769AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKLESVEPTNT
Ga0208767_105494723300025769AqueousLNLKGTAMKEFEVEMSATTYRTFTVTAESAEQAEEFAWEVLDNDEEISGAWKDSAKLESVEPCQ
Ga0208767_125271513300025769AqueousTMKEYEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQ
Ga0208547_102593473300025828AqueousMNLTLKGTAMKEFEVELSATTYRTFYITAESAEQAEELAWEVLDEDEEISGAWKDNAKLESVEPTNN
Ga0208917_125965013300025840AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEALDEDEEISGAWKDSAKLESVEPTCQ
Ga0208645_123674313300025853AqueousMKEFEVELSATTYRTFYITAESAEQAEELAWDALDEDEEISGAWKDNAKLESVE
Ga0208645_129048723300025853AqueousMKEFEIELSATTCRTFYVTAESAEQAEELVWDALDEDEEISGAWKDSAKIESVEQCQ
Ga0348335_022662_2464_26373300034374AqueousMKEFEVELSATTYRTFYITAESAEQAEEMAWEVLDEDEEISGAWKDNAKLESVEPCQ
Ga0348337_040415_983_11563300034418AqueousMKEFEVELSATTYRTFYVTAESAEQAEELAWEVLDEDEEISGAWKDSAKIESVEPCQ


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