Metagenome / Metatranscriptome Family F088484

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088484
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	96 residues
Representative Sequence	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN
Number of Associated Samples	97
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.65 %
% of genes near scaffold ends (potentially truncated)	21.10 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.229 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.018 % of family members)
Environment Ontology (ENVO)	Unclassified (28.440 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.532 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.00% β-sheet: 0.00% Coil/Unstructured: 32.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF01844	HNH	51.38
PF02417	Chromate_transp	1.83
PF01797	Y1_Tnp	1.83
PF12441	CopG_antitoxin	1.83
PF01451	LMWPc	0.92
PF13267	DUF4058	0.92
PF04255	DUF433	0.92
PF08240	ADH_N	0.92
PF13395	HNH_4	0.92
PF04392	ABC_sub_bind	0.92
PF00376	MerR	0.92
PF00884	Sulfatase	0.92
PF00107	ADH_zinc_N	0.92
PF14279	HNH_5	0.92
PF13482	RNase_H_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.83
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	1.83
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.92
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.23 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.23 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.23 %
Unclassified	root	N/A	24.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	18.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.83 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	1.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	17.43 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.92 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.43 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.92 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.92 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.43 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Dehalococcoidia bacterium DG_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium DG_22	0.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.92 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.92 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.43 %
Thermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.92 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.92 %
Dehalococcoidia bacterium DG_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium DG_22	0.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.43 %
Thermus thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus thermophilus	1.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Actinomadura flavalba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba	0.92 %
Pseudomonas sp. CFII64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. CFII64	0.92 %
Dehalococcoidia bacterium DG_22	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium DG_22	0.92 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0798004	Not Available	546	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11081123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1271	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101866312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1149	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101866783	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300000559\|F14TC_100852807	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300003659\|JGI25404J52841_10102976	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300004633\|Ga0066395_10773285	Not Available	575	Open in IMG/M
3300005177\|Ga0066690_10174409	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300005181\|Ga0066678_10301072	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005332\|Ga0066388_101793528	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300005332\|Ga0066388_102145902	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300005445\|Ga0070708_100370008	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300005446\|Ga0066686_10595090	Not Available	752	Open in IMG/M
3300005467\|Ga0070706_100171451	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300005471\|Ga0070698_102095892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba	519	Open in IMG/M
3300005518\|Ga0070699_100397224	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300005536\|Ga0070697_101941497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. CFII64	527	Open in IMG/M
3300005563\|Ga0068855_100415981	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300006034\|Ga0066656_10506795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	787	Open in IMG/M
3300006806\|Ga0079220_11167524	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006847\|Ga0075431_100832651	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300006854\|Ga0075425_101995215	Not Available	649	Open in IMG/M
3300006880\|Ga0075429_100042309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3965	Open in IMG/M
3300009012\|Ga0066710_104605910	Not Available	515	Open in IMG/M
3300009038\|Ga0099829_10102187	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300009088\|Ga0099830_11182164	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300009089\|Ga0099828_10139375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2135	Open in IMG/M
3300009090\|Ga0099827_10464102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1086	Open in IMG/M
3300009094\|Ga0111539_10519876	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300009137\|Ga0066709_101718852	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300009146\|Ga0105091_10085206	Not Available	1435	Open in IMG/M
3300009147\|Ga0114129_10631329	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300009157\|Ga0105092_10374088	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300009792\|Ga0126374_11546673	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300009801\|Ga0105056_1032347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300009815\|Ga0105070_1033348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus thermophilus	927	Open in IMG/M
3300009816\|Ga0105076_1059543	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300009822\|Ga0105066_1079432	Not Available	710	Open in IMG/M
3300009837\|Ga0105058_1101780	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300010041\|Ga0126312_10541812	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300010046\|Ga0126384_10878106	Not Available	808	Open in IMG/M
3300010046\|Ga0126384_12478775	Not Available	503	Open in IMG/M
3300010047\|Ga0126382_10204181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1409	Open in IMG/M
3300010047\|Ga0126382_11061392	Not Available	715	Open in IMG/M
3300010358\|Ga0126370_10992980	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300010360\|Ga0126372_11439132	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300010366\|Ga0126379_12666631	Not Available	597	Open in IMG/M
3300010398\|Ga0126383_10314672	Not Available	1570	Open in IMG/M
3300010398\|Ga0126383_11922027	Not Available	680	Open in IMG/M
3300011271\|Ga0137393_10826325	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300012189\|Ga0137388_12027845	Not Available	503	Open in IMG/M
3300012199\|Ga0137383_10828329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Thermus → Thermus thermophilus	675	Open in IMG/M
3300012202\|Ga0137363_11523972	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012204\|Ga0137374_10245147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1506	Open in IMG/M
3300012206\|Ga0137380_10405472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1210	Open in IMG/M
3300012207\|Ga0137381_10082706	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300012207\|Ga0137381_10160119	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300012209\|Ga0137379_11773432	Not Available	512	Open in IMG/M
3300012360\|Ga0137375_10247720	Not Available	1647	Open in IMG/M
3300012362\|Ga0137361_10549375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1060	Open in IMG/M
3300012363\|Ga0137390_10141330	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300012923\|Ga0137359_10667304	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012929\|Ga0137404_10047537	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300012929\|Ga0137404_10342317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1307	Open in IMG/M
3300012930\|Ga0137407_10743708	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300012944\|Ga0137410_11343129	Not Available	620	Open in IMG/M
3300012948\|Ga0126375_10509838	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012971\|Ga0126369_10459046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1325	Open in IMG/M
3300012971\|Ga0126369_10582736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1187	Open in IMG/M
3300012972\|Ga0134077_10456634	Not Available	560	Open in IMG/M
3300015373\|Ga0132257_101939612	Not Available	759	Open in IMG/M
3300017997\|Ga0184610_1239791	Not Available	604	Open in IMG/M
3300018052\|Ga0184638_1117391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	973	Open in IMG/M
3300018053\|Ga0184626_10085760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1332	Open in IMG/M
3300018056\|Ga0184623_10093358	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300018056\|Ga0184623_10286166	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300018063\|Ga0184637_10197791	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300018076\|Ga0184609_10076768	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300018078\|Ga0184612_10068891	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300018079\|Ga0184627_10078924	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300018082\|Ga0184639_10355043	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300018469\|Ga0190270_10230181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1594	Open in IMG/M
3300019233\|Ga0184645_1300338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1172	Open in IMG/M
3300019248\|Ga0180117_1249866	Not Available	604	Open in IMG/M
3300019249\|Ga0184648_1094760	Not Available	594	Open in IMG/M
3300019259\|Ga0184646_1193467	Not Available	851	Open in IMG/M
3300019487\|Ga0187893_10416104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	904	Open in IMG/M
3300019487\|Ga0187893_10519445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	772	Open in IMG/M
3300019789\|Ga0137408_1129369	All Organisms → cellular organisms → Bacteria	10424	Open in IMG/M
3300025910\|Ga0207684_10445198	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300025910\|Ga0207684_11183838	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300027379\|Ga0209842_1079818	Not Available	568	Open in IMG/M
3300027384\|Ga0209854_1095756	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027511\|Ga0209843_1030278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300027743\|Ga0209593_10016526	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300027875\|Ga0209283_10470582	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300027882\|Ga0209590_10445049	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300027907\|Ga0207428_10186634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium DG_22	1564	Open in IMG/M
3300027909\|Ga0209382_10967448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	890	Open in IMG/M
3300028889\|Ga0247827_10454028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	791	Open in IMG/M
3300030006\|Ga0299907_10766069	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300030993\|Ga0308190_1036178	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300031092\|Ga0308204_10104609	Not Available	785	Open in IMG/M
3300031092\|Ga0308204_10111298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	768	Open in IMG/M
3300031573\|Ga0310915_10849021	Not Available	641	Open in IMG/M
3300031576\|Ga0247727_10287716	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300031847\|Ga0310907_10384475	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300031954\|Ga0306926_12324479	Not Available	593	Open in IMG/M
3300032001\|Ga0306922_12086578	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.83%
Host-Associated	Host-Associated	9.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.23%
Aquatic	Environmental → Aquatic	15.60%
Plants	Host-Associated → Plants	9.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.48%
Sediment	Environmental → Aquatic → Sediment	9.17%
Freshwater	Environmental → Aquatic → Freshwater	6.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.42%
Cave	Environmental → Terrestrial → Cave	2.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.05%
Loam	Environmental → Terrestrial → Soil → Loam	10.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.17%
Sand	Environmental → Terrestrial → Soil → Sand	7.34%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.42%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.17%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.75%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.34%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.83%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.92%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_07980041	2228664022	Soil	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRTRQLLGIGN
ICChiseqgaiiFebDRAFT_110811233	3300000363	Soil	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRMRQLLGIGN*
INPhiseqgaiiFebDRAFT_1018663122	3300000364	Soil	MDEQAYQYWQXLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRTRQLLGIGN*
INPhiseqgaiiFebDRAFT_1018667832	3300000364	Soil	MDEQAYQYWQSLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRTRQLLGIGN*
F14TC_1008528072	3300000559	Soil	VPREGAGGMDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHEVELDARIAALEARLDTRTRQLLGIGN*
JGI25404J52841_101029762	3300003659	Tabebuia Heterophylla Rhizosphere	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRTRQLLGIGN*
Ga0066395_107732852	3300004633	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARIAALEARLDTRTRQLLGIGS*
Ga0066690_101744092	3300005177	Soil	MDEQAYQYWQVLHQRVAMGEMLSVAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAEVEQQRLRAREAELDARIAALEARLDIRTRRLLGIGN*
Ga0066678_103010722	3300005181	Soil	MDEQAYQYRQVLHQRVAMGEMLSVAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAEVEQQRLQAREAELDARIAALEARLDIRTRRLLGIGN*
Ga0066388_1017935282	3300005332	Tropical Forest Soil	MGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAALEARLDTRTRQLRGIGS*
Ga0066388_1021459021	3300005332	Tropical Forest Soil	MDEQAYQYWQGLHQRVVIGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDT
Ga0070708_1003700082	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQTYQRWQVLHRRVVLGETLNAAEQAVYESGCQELDAEERLDGDLERLRELRAHIAAAETEPQHLQAREAELDARIVALEARLDIRTRQLLGISN*
Ga0066686_105950902	3300005446	Soil	MDEQAYQYWQHLHQRVVMGETISAAEQAVYEAGCEKLDAEERLDGNLERLRELRAQIVAAEAEQQRLRAHEAELDARIAALEARLDTRTRQLLGIGN*
Ga0070706_1001714513	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQTYQHWQVLHRRVVLGETLNAAEQAVYESGCQELDAEERLDGDLERLRELRAHIAAAETEQQHLQAREAELDARIVALEARLDIRTRQLLGISN*
Ga0070698_1020958921	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQTYQHWQVLHRRVVLGETLNAAEQAVYESGCQELDAEERLDGDLERLRELRAHIAAAETEPQHLQAREAELDARIVALEARLDIRTRQLLGISN*
Ga0070699_1003972241	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	WQVLHRRVVLGETLNAAEQAVYESGCQELDAAERLDGDLERLRELRAHIAAAETEPQHLQAREAELDARIVALEARLDIRTRQLLGISN*
Ga0070697_1019414971	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQAYQYWQVLHQRVAMGEMLSVAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAEVEQQRLRAREAELDARIAALE
Ga0068855_1004159813	3300005563	Corn Rhizosphere	MDSRVYRQWQELHRRTVLGETLAASEQEVYEAGCRELDAEETQDGGLEQMRRLRNDILSAEREQQQLREQEVKLDARIAALEARLDARTRQLLGIGN*
Ga0066656_105067952	3300006034	Soil	QRVVQGERLSAAEQTVYEAGCEELDAEERLDGNLERLRQLRAHITAAEAEQQRLRAQEAALDARIVALEARLDTRTRQLLGIGN*
Ga0079220_111675241	3300006806	Agricultural Soil	MDEQAYQQWQVLHRRFVSGERLSESEQADYEAGCRELDAQETLDGNLERLRALRNQIAEAETEQQRLRIQEKELDARIATLEARLDARTRQLLGIGS*
Ga0075431_1008326512	3300006847	Populus Rhizosphere	MDERAYQYWQVLHQRVTMGETLSLAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAETAQQRLRAQEAELDARIVALEARLDTRTRQLLGI
Ga0075425_1019952152	3300006854	Populus Rhizosphere	MDERAYQYWQVLHQRVTMGETLSLAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAETAQQRLRAQEAELDARIVAL
Ga0075429_1000423098	3300006880	Populus Rhizosphere	MDERAYQYWQVLHQRVTMGETLSLAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAETAQQRLRAQEAELDARIVALEARLDTRTRQLLGIGN*
Ga0066710_1046059101	3300009012	Grasslands Soil	MDEQAYQYWQMLHRRVALGEPLNPAEQAVYQSGCQELDAEERLDGNLERLRELRAQIAAVETEQRRLQAQAAELDARIMALEARLDTRTRQRLGIST
Ga0099829_101021873	3300009038	Vadose Zone Soil	MDEQAYQYWQILHQRVAMGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0099830_111821642	3300009088	Vadose Zone Soil	EQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRIREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0099828_101393752	3300009089	Vadose Zone Soil	MDEQAYQYWQVLHQRVAMGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQHLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0099827_104641022	3300009090	Vadose Zone Soil	YQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0111539_105198761	3300009094	Populus Rhizosphere	ELIAKVRAGEIVGLISFQSAPDFRGEGARAMDERAYQYWQVLHQRVTMGETLSLAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAETAQQRLRAQEAELDARIVALEARLDTRTRQLLGIGN*
Ga0066709_1017188522	3300009137	Grasslands Soil	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEEWLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDRRTRQLLGIGN*
Ga0105091_100852064	3300009146	Freshwater Sediment	MDEQAYQYWQILHRRMALGETLTTAEPAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETDQQRLQAREAELDARIAALEARLDARTRQLLGISS*
Ga0114129_106313292	3300009147	Populus Rhizosphere	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELCAQIAAAEAEQQRLRAHGAELDARITALEARLDTRTRQLLGIGN*
Ga0105092_103740882	3300009157	Freshwater Sediment	MDEQAYQYWQILHRRMALGETLTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETDQQRLQAREAELDARIAALEARLDARTRQLLGISS*
Ga0126374_115466732	3300009792	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQIVAAEAEQQRLRVQGAELDARIAALEARLDTRTRQLLGIGN*
Ga0105056_10323472	3300009801	Groundwater Sand	MDEQAYQYWQILHRRVAMGETLNPAEQAVYQSGCQELDAAEKLDGNLERLRELRAQIAAAETEQRRLQAQEAELDARIMALEARLDTRTRQLLGISN*
Ga0105070_10333482	3300009815	Groundwater Sand	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMGTRQLLGIGN*
Ga0105076_10595431	3300009816	Groundwater Sand	MDEQAYQYWQVLHQRMALGETLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDTRIVALESRLDMRTRQLLGIGN*
Ga0105066_10794321	3300009822	Groundwater Sand	MDEQAYQYWQVLHRRVTLGETLTTAEQAVYESGCQEMDAEERVDDNLERLRELHAQIAAAETEQRRLQAQEAELDARIVALEARLDTRTRQLLGISN*
Ga0105058_11017801	3300009837	Groundwater Sand	MDEQAHQYWQILHRRMALGETLTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQRLQAREAELDARIAALEARLDARTRQLL
Ga0126312_105418121	3300010041	Serpentine Soil	MDEQAYQYWQSLHRRVMLGETLTTAEQAVYESGCEEMDAKERLDGNLERLRELRTQIAAAETEQQRLQAREAELDARIAALEARLDARTRQLLGINS*
Ga0126384_108781061	3300010046	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAVLEAR
Ga0126384_124787751	3300010046	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARI
Ga0126382_102041811	3300010047	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEEWLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRTRQLLGIGN*
Ga0126382_110613922	3300010047	Tropical Forest Soil	MDEQAYQYWQVLHRRVATGETLNAAEQAVYESGCQALDAEERLVGNLARLRELRARIAAAETEQQRLRVQEAELDARIIALEARLDTRTRQLLGI
Ga0126370_109929802	3300010358	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAALEARLDTRTRQLLGIGS*
Ga0126372_114391321	3300010360	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAALEARLDTRTRQLRGIGS*
Ga0126379_126666311	3300010366	Tropical Forest Soil	MEEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQIAAAEAEQQRLRAHEAELDARIVALEASLDTRTRQLLGIGN*
Ga0126383_103146721	3300010398	Tropical Forest Soil	MDEQVYQYWQGLHQRVVMGEALSAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIVAAEAEQQRLREHEAELDARIAALEARLDTRTRQLLGIGN*
Ga0126383_119220271	3300010398	Tropical Forest Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAALEARLNTRTRQLLGIGN*
Ga0137393_108263251	3300011271	Vadose Zone Soil	MDEQAYQYWQVLHQRVAMGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0137388_120278451	3300012189	Vadose Zone Soil	MDEQASQYWQVLHQRVAMGEMLSVAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAEVEQQRLRAREAELDARIAALEARLDIRTRRLLGIGN*
Ga0137383_108283291	3300012199	Vadose Zone Soil	MDEQAYQYWQVLHQRVALGGTLNAAEQAAYETGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDRRTRQFLGIGN*
Ga0137363_115239721	3300012202	Vadose Zone Soil	MDEQAYQYWQVLHQRAALGGTLNAAEQAAYEAGCQELDAEERLDGNLERLRELRAHIAAAETEQQRIREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0137374_102451472	3300012204	Vadose Zone Soil	MGEQAYQYWQVLHQRVALGGTLSAVEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAVETEQQRLREREAELDARIVALESRLDMRTRPLLGIGN*
Ga0137380_104054721	3300012206	Vadose Zone Soil	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0137381_100827063	3300012207	Vadose Zone Soil	MDEQAYQYWQVLHQRVAMGDMLSVAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAEVEQQRLRAREAELDARIAALEARLDIRTRRLLGIGN*
Ga0137381_101601193	3300012207	Vadose Zone Soil	MDEQAYQYWQVLHQRVALGGTLSASEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0137379_117734322	3300012209	Vadose Zone Soil	MDEQAYQYWQVLHQRVALGGTLNAAEQAAYETGCQELDTEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0137375_102477203	3300012360	Vadose Zone Soil	MDEQAYQYWQVLHRRVTLGEALTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQRLQAREAELDAGIAALEARLDARTRQLLGISR*
Ga0137361_105493753	3300012362	Vadose Zone Soil	MDEPAYQYWQVLHQRVALGGTLRAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLRERETERDARIVALESRLDMRTRQLLGIGN*
Ga0137390_101413301	3300012363	Vadose Zone Soil	EYEPLIRGGRFCGILAERKSAQREGAGVMDEQAHQYWQVLHQRVALGGTLSAAEQAAYEVGCQELDAEEKLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0137359_106673041	3300012923	Vadose Zone Soil	EGAGAMDEQAYQYWQILHRRVALGETLTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQRLQAREAELDARIAALEARLDARTRQLLGISN*
Ga0137404_100475374	3300012929	Vadose Zone Soil	MDEQAYQYWQILHRRVALGETLTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQRLQAREAELDARIAALEARLDARTRQLLGISN*
Ga0137404_103423171	3300012929	Vadose Zone Soil	MDEQAYQYWQVLHQRVALGGTLSAVEQAAYEAGCQELDAEERMDGNLERLRELRAQITAVETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0137407_107437081	3300012930	Vadose Zone Soil	MDEQAYQYWQGLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRPLLGIGN*
Ga0137410_113431291	3300012944	Vadose Zone Soil	MDEQAYQYWQILHRRVALGETLTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQRLQARETELDTRIAALEARLDARTRQLLGIST*
Ga0126375_105098381	3300012948	Tropical Forest Soil	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLGRRTRQLLGIGN*
Ga0126369_104590461	3300012971	Tropical Forest Soil	EGGSVPSEGAGVIDVQEDQYCQGLHHRVVMGETLSAAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAALEARLDTRTRQLLGIGN*
Ga0126369_105827362	3300012971	Tropical Forest Soil	YQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEERLDGNLERLRELRAQIVAAEAEQQRLRVQGAELDARIAALEARLDTRTRQLLGIGN*
Ga0134077_104566342	3300012972	Grasslands Soil	MDEQAYQYWQVLHQRVALSGTLNAAEQAAYETGCQELDAEERLDGNLERLRELRAHIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN*
Ga0132257_1019396121	3300015373	Arabidopsis Rhizosphere	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARIIALEARLDTRTRQLLGIGN*
Ga0184610_12397912	3300017997	Groundwater Sediment	MDEQTYQYWQVLHRRVALGETLTTAEQVVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQHLKAREAELDARIVALEARLDTRTRQLLGISN
Ga0184638_11173912	3300018052	Groundwater Sediment	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN
Ga0184626_100857601	3300018053	Groundwater Sediment	MDEQAYQYWQVLHQRVALGGTLSAAEQTAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRIREREAELDARIVALESRLDMRTRQLLGIGN
Ga0184623_100933582	3300018056	Groundwater Sediment	MDEQAYQYWQVLHQRVALGGTLSAAEQTAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDIRTRQLLGIGN
Ga0184623_102861662	3300018056	Groundwater Sediment	MDEQAYQYWQVLHQQVAMGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIATAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN
Ga0184637_101977912	3300018063	Groundwater Sediment	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRIREREAELDARIVALESRLDMRTRQLFGIGN
Ga0184609_100767681	3300018076	Groundwater Sediment	MDEQAYQYWQVLHQQVALGGTLSAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN
Ga0184612_100688912	3300018078	Groundwater Sediment	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDIRTRQLLGIGN
Ga0184627_100789243	3300018079	Groundwater Sediment	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQRIREREAELDARIVALESRLDMRTRQLLGIGN
Ga0184639_103550431	3300018082	Groundwater Sediment	QAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEEQLDGNLERLRELRAQIAAAETEQQRIREREAELDARIVALESRLDMRTRQLLGIGN
Ga0190270_102301811	3300018469	Soil	QTYQRWQDLHQRVATGETLSAAEQRAYDAGCQALDTGEDLDGNLDYLRALRTQITAAETERQRLRAQEADLDARIRALEAHLDPRTRHLLGIGS
Ga0184645_13003382	3300019233	Groundwater Sediment	MDEQAYQEWQVLHQRVAMGETLSAAEQAAYEAGCQELDTEERLDGNLERLRELRAQIAAAETEQQRLRAQEAALDARIVALEARLDTRTRQLLGIGN
Ga0180117_12498661	3300019248	Groundwater Sediment	MDEQAYQDWQILHRRMMQGEMLNAAEQAVYEAGCQELDAEERLDGNLERLRELRAQIAAAELEQQRLREREAELDARIVALEARLDTRTRQLLGIGD
Ga0184648_10947602	3300019249	Groundwater Sediment	MDEQAYQYWQVLHQRVALGGTLNTAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRIREREAELDARIVALESRLDMRTRQLLGIGN
Ga0184646_11934671	3300019259	Groundwater Sediment	MDEQTYEYWQVLHRCVALGETLTTAEQVVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQHLKAREAELDARIVALEARLDTRTRQLLGISN
Ga0187893_104161042	3300019487	Microbial Mat On Rocks	MNEQAYQYWQVLHRRVALGETLSAAERTTYEAGCQEWDAEERLDGSLGRLRELRAQIAAVETEQQRLREREAELDARIAALEARLDTRTRQLLGIGN
Ga0187893_105194451	3300019487	Microbial Mat On Rocks	VLHQRVALGETLNATEQAVYESGCQELDAEERLDGNLERLRELRTQIVAAETEQQRLREQEAALDARIVALEACLDTRTRQLLGIGN
Ga0137408_11293698	3300019789	Vadose Zone Soil	MDEQAYQYWQILHRRVALGETLTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETEQQRLQAREAELDARIAALEARLDARTRQLLGISN
Ga0207684_104451982	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQTYQHWQVLHRRVVLGETLNAAEQAVYESGCQELDAEERLDGDLERLRELRAHIAAAETEQQHLQAREAELDARIVALEARLDIRTRQLLGISN
Ga0207684_111838381	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDEQAYQYWQVLHQRVAMGEMLSVAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAEVEQQRLRAREAELDARIAALEARLDIRTRRLLGIGN
Ga0209842_10798181	3300027379	Groundwater Sand	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRLREREAELDTRIVALESRLDMRTRQLLGIGN
Ga0209854_10957561	3300027384	Groundwater Sand	MDEQAYQSWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEEWLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN
Ga0209843_10302782	3300027511	Groundwater Sand	MDEQAYQYWQVLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQHLREREAELDARIVALESRLDMRTRQLLGIGN
Ga0209593_100165263	3300027743	Freshwater Sediment	MDEQAYQYWQILHRRMALGETLTTAEQAVYESGCQEMDAEERLDGNLERLRELRAQIAAAETDQQRLQAREAELDARIAALEARLDARTRQLLGISS
Ga0209283_104705821	3300027875	Vadose Zone Soil	MDEQAYQYWQGLHQRVALGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQRIREREAELDARIVALESRLDMRTRQLLGIGN
Ga0209590_104450491	3300027882	Vadose Zone Soil	DEQAHQHWQVLHQRVALGGTLSAAEQAAYEVGCQELDAEEKLDGNLERLRELRAQIAAAETEQQRLREREAELDARIVALESRLDMRTRQLLGIGN
Ga0207428_101866343	3300027907	Populus Rhizosphere	MDERAYQYWQVLHQRVTMGETLSLAEQAAYEAGCQELDAEERLDGNLERLRALRAQIATAETAQQRLRAQEAELDARIVALEARLDTRTRQLLGIGN
Ga0209382_109674481	3300027909	Populus Rhizosphere	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRMRQLLGIGN
Ga0247827_104540281	3300028889	Soil	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRALRAQIAAAEAEQQRLRAHGAELDARITALEARLDTRTRQLLGIGN
Ga0299907_107660692	3300030006	Soil	MDEQAYQYWQVLHRRMIRSETLSAAEQAIYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQHLREQEAALDAHIIALEARLDARTRQLLGIGN
Ga0308190_10361781	3300030993	Soil	QSEGAGAMDEQAYQYWQVLHQRVAMGGTLSAAEQAAYEAGCQELDAEERMDGNLERLRELRAQIAAAETEQQHLREREAELDARIVALGSRLDRRTRQLLGIGN
Ga0308204_101046092	3300031092	Soil	MDEQAYQYWQILHRWVAMGETLNPAEQAVYQSGYQELDAEKRLDGNLERLRELRAQIAAAETEQRRLQAQEAELDARIMALDARLDTRTRQLLGISN
Ga0308204_101112981	3300031092	Soil	MDEQAYQYWQVLHQRVALGGTLNAAEQAAYEAGCQELDAEERLDGNLERLRELRAQIAAAETEQQHLRERETELDARIVALESRLDMRTRQLLGIGN
Ga0310915_108490212	3300031573	Soil	MDEQAYQYWQGLYQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAALEARLDTRTRQLLGIGN
Ga0247727_102877162	3300031576	Biofilm	MDEQALQHWQALHRRVVMGEKLSAAERIVYEAGCRELAAAEQLDGNLEQLRELRARIAKAEVEQKRLRKRQVEFDARIAELEARLDQRTRQLLGIGS
Ga0310907_103844752	3300031847	Soil	MDEQAYQYWQGLHQRVVMGETLNAAEQAVYEAGCEELDAEERLDGNLERLRELRAQIAAAEAEQQRLRAHGAELDARIIALEARLDTRTRQLLGIGN
Ga0306926_123244792	3300031954	Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAAL
Ga0306922_120865782	3300032001	Soil	MDEQAYQYWQGLHQRVVMGETLSPAEQAVYEAGCEELDAEEWLDGNLERLRELRAQITAAEAEQQRLRAHGAELDARIAALEARLDTRTRQLLGIGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088484

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences