NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F088477

Metagenome / Metatranscriptome Family F088477

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F088477
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 109 residues
Representative Sequence MENLKIYESFVEDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLS
Number of Associated Samples 93
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 16.67 %
% of genes near scaffold ends (potentially truncated) 34.86 %
% of genes from short scaffolds (< 2000 bps) 55.96 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (64.220 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(24.771 % of family members)
Environment Ontology (ENVO) Unclassified
(37.615 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(54.128 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.72%    β-sheet: 1.45%    Coil/Unstructured: 47.83%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.389.1.1: Menin N-terminal domain-liked4gq4a14gq40.57673
a.116.1.2: p120GAP domain-liked6v6fb_6v6f0.56158
a.264.1.1: Duffy binding domaind1zroa21zro0.55508
c.1.8.5: Type II chitinased1goia21goi0.55173
f.1.4.0: automated matchesd6h1na16h1n0.54659


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF01165Ribosomal_S21 38.53
PF01075Glyco_transf_9 10.09
PF10431ClpB_D2-small 6.42
PF00535Glycos_transf_2 3.67
PF13203DUF2201_N 2.75
PF13847Methyltransf_31 1.83
PF01041DegT_DnrJ_EryC1 1.83
PF11019DUF2608 1.83
PF16363GDP_Man_Dehyd 0.92
PF05050Methyltransf_21 0.92
PF01467CTP_transf_like 0.92
PF13489Methyltransf_23 0.92
PF00691OmpA 0.92
PF13578Methyltransf_24 0.92
PF00801PKD 0.92
PF00685Sulfotransfer_1 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0828Ribosomal protein S21Translation, ribosomal structure and biogenesis [J] 38.53
COG0859ADP-heptose:LPS heptosyltransferaseCell wall/membrane/envelope biogenesis [M] 10.09
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 1.83
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 1.83
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 1.83
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 1.83
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 1.83
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 1.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.22 %
All OrganismsrootAll Organisms35.78 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000929|NpDRAFT_10469723Not Available643Open in IMG/M
3300001948|GOS2228_1038510All Organisms → cellular organisms → Bacteria → Proteobacteria1765Open in IMG/M
3300002408|B570J29032_109953823All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales6313Open in IMG/M
3300002835|B570J40625_100412586Not Available1307Open in IMG/M
3300003409|JGI26088J50261_1001397Not Available13041Open in IMG/M
3300003427|JGI26084J50262_1001127All Organisms → cellular organisms → Bacteria15090Open in IMG/M
3300003621|JGI26083J51738_10003287All Organisms → cellular organisms → Bacteria8095Open in IMG/M
3300004240|Ga0007787_10231829All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300004240|Ga0007787_10509122Not Available602Open in IMG/M
3300005582|Ga0049080_10014600All Organisms → Viruses → Predicted Viral2733Open in IMG/M
3300005582|Ga0049080_10030493Not Available1882Open in IMG/M
3300006026|Ga0075478_10264493Not Available513Open in IMG/M
3300006810|Ga0070754_10000520Not Available35491Open in IMG/M
3300006810|Ga0070754_10000695Not Available29767Open in IMG/M
3300006810|Ga0070754_10003500Not Available11054Open in IMG/M
3300006810|Ga0070754_10032218All Organisms → cellular organisms → Bacteria2913Open in IMG/M
3300006868|Ga0075481_10157097Not Available826Open in IMG/M
3300006869|Ga0075477_10041101All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2085Open in IMG/M
3300006870|Ga0075479_10316802Not Available610Open in IMG/M
3300006919|Ga0070746_10060233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium1959Open in IMG/M
3300007344|Ga0070745_1000401Not Available26827Open in IMG/M
3300007344|Ga0070745_1008750All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Altiarchaeota → Candidatus Altiarchaeales → unclassified Candidatus Altiarchaeales → Candidatus Altiarchaeales archaeon4921Open in IMG/M
3300007345|Ga0070752_1020010Not Available3407Open in IMG/M
3300007539|Ga0099849_1030884All Organisms → cellular organisms → Bacteria → Proteobacteria2292Open in IMG/M
3300007593|Ga0102918_1015294All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.BinA1042030Open in IMG/M
3300007640|Ga0070751_1000592Not Available22267Open in IMG/M
3300007640|Ga0070751_1002582All Organisms → cellular organisms → Bacteria10297Open in IMG/M
3300008012|Ga0075480_10531572Not Available563Open in IMG/M
3300008055|Ga0108970_10056267Not Available22555Open in IMG/M
3300008055|Ga0108970_11097624All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium4005Open in IMG/M
3300008113|Ga0114346_1062598All Organisms → Viruses → Predicted Viral1809Open in IMG/M
3300008116|Ga0114350_1154869Not Available632Open in IMG/M
3300008267|Ga0114364_1060700Not Available1311Open in IMG/M
3300009026|Ga0102829_1253155Not Available579Open in IMG/M
3300009149|Ga0114918_10022489All Organisms → cellular organisms → Bacteria4676Open in IMG/M
3300009169|Ga0105097_10448666Not Available719Open in IMG/M
3300009419|Ga0114982_1156159Not Available704Open in IMG/M
3300009435|Ga0115546_1185608Not Available723Open in IMG/M
3300009508|Ga0115567_10510073Not Available731Open in IMG/M
3300010354|Ga0129333_10019289Not Available6487Open in IMG/M
3300010389|Ga0136549_10397401Not Available559Open in IMG/M
3300011995|Ga0153800_1017987Not Available716Open in IMG/M
3300013004|Ga0164293_10601205Not Available714Open in IMG/M
(restricted) 3300013127|Ga0172365_10073704All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2212Open in IMG/M
3300013372|Ga0177922_11093099All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium2422Open in IMG/M
3300016771|Ga0182082_1377597Not Available592Open in IMG/M
3300017788|Ga0169931_10030872Not Available6335Open in IMG/M
3300017818|Ga0181565_10010040All Organisms → cellular organisms → Bacteria7147Open in IMG/M
3300017949|Ga0181584_10000704Not Available24343Open in IMG/M
3300017950|Ga0181607_10085222All Organisms → cellular organisms → Bacteria2029Open in IMG/M
3300017957|Ga0181571_10334034Not Available950Open in IMG/M
3300017969|Ga0181585_10025188All Organisms → cellular organisms → Bacteria4830Open in IMG/M
3300017987|Ga0180431_10013432Not Available8789Open in IMG/M
3300018080|Ga0180433_10041860All Organisms → cellular organisms → Bacteria4389Open in IMG/M
3300018080|Ga0180433_10048228All Organisms → cellular organisms → Bacteria4002Open in IMG/M
3300018428|Ga0181568_11461752Not Available505Open in IMG/M
3300020052|Ga0181554_1182677All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300020151|Ga0211736_10805483Not Available3572Open in IMG/M
3300020159|Ga0211734_10284258Not Available4448Open in IMG/M
3300020160|Ga0211733_10569697Not Available521Open in IMG/M
3300020161|Ga0211726_10635448All Organisms → cellular organisms → Bacteria4197Open in IMG/M
3300020161|Ga0211726_10664647All Organisms → cellular organisms → Bacteria12003Open in IMG/M
3300020162|Ga0211735_10414237Not Available923Open in IMG/M
3300020176|Ga0181556_1283375Not Available575Open in IMG/M
3300020184|Ga0181573_10453603Not Available575Open in IMG/M
3300020519|Ga0208223_1009285Not Available1605Open in IMG/M
3300020573|Ga0208485_1037381All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300021335|Ga0213867_1271979Not Available541Open in IMG/M
3300021368|Ga0213860_10080339Not Available1414Open in IMG/M
3300021958|Ga0222718_10013998Not Available5797Open in IMG/M
3300021961|Ga0222714_10269602Not Available946Open in IMG/M
3300021962|Ga0222713_10203763All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1321Open in IMG/M
3300022071|Ga0212028_1010078All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1499Open in IMG/M
3300022187|Ga0196899_1011606All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3458Open in IMG/M
3300022905|Ga0255756_1155684All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300023184|Ga0214919_10098076All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium2509Open in IMG/M
3300024348|Ga0244776_10101190Not Available2155Open in IMG/M
3300024348|Ga0244776_10573615Not Available716Open in IMG/M
3300025608|Ga0209654_1000390Not Available44099Open in IMG/M
3300025608|Ga0209654_1073297Not Available982Open in IMG/M
3300025636|Ga0209136_1043713Not Available1555Open in IMG/M
3300025671|Ga0208898_1000160Not Available57450Open in IMG/M
3300025671|Ga0208898_1000904Not Available21236Open in IMG/M
3300025684|Ga0209652_1080975Not Available1001Open in IMG/M
3300025696|Ga0209532_1232569Not Available504Open in IMG/M
3300025701|Ga0209771_1212163Not Available553Open in IMG/M
3300025751|Ga0208150_1011326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium3210Open in IMG/M
3300025751|Ga0208150_1037007All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300025751|Ga0208150_1121511Not Available842Open in IMG/M
3300025771|Ga0208427_1136986Not Available817Open in IMG/M
3300027127|Ga0255071_1017237Not Available1152Open in IMG/M
3300027153|Ga0255083_1083044Not Available602Open in IMG/M
3300027155|Ga0255081_1103141Not Available539Open in IMG/M
3300027608|Ga0208974_1156214Not Available575Open in IMG/M
3300027804|Ga0209358_10290764Not Available807Open in IMG/M
3300028027|Ga0247722_10214688Not Available674Open in IMG/M
3300031787|Ga0315900_11005642Not Available547Open in IMG/M
3300031857|Ga0315909_10236515Not Available1414Open in IMG/M
3300031963|Ga0315901_10920690Not Available620Open in IMG/M
3300033418|Ga0316625_102083876Not Available561Open in IMG/M
3300033994|Ga0334996_0143766Not Available1335Open in IMG/M
3300033994|Ga0334996_0162843Not Available1228Open in IMG/M
3300034073|Ga0310130_0020682All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacter → Desulfobacter vibrioformis2101Open in IMG/M
3300034101|Ga0335027_0057065All Organisms → cellular organisms → Bacteria → Proteobacteria3127Open in IMG/M
3300034116|Ga0335068_0076768All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1905Open in IMG/M
3300034374|Ga0348335_000182Not Available52746Open in IMG/M
3300034375|Ga0348336_074870All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300034418|Ga0348337_004761All Organisms → cellular organisms → Bacteria9107Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous24.77%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh10.09%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine8.26%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater7.34%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater6.42%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine4.59%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake2.75%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.75%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.75%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater2.75%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.75%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.75%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment2.75%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater1.83%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater1.83%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.83%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.83%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary1.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.92%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.92%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.92%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.92%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.92%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.92%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.92%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.92%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.92%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.92%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300001948Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012EnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003409Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNAEnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300003621Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNAEnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007593Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3EnvironmentalOpen in IMG/M
3300007603Estuarine microbial communities from the Columbia River estuary - metaG 1568-02EnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300009026Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009419Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FTEnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300011995Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300016771Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020052Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020184Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020519Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)EnvironmentalOpen in IMG/M
3300020573Freshwater microbial communities from Lake Mendota, WI - 17JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022905Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaGEnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025608Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025684Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027127Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8hEnvironmentalOpen in IMG/M
3300027153Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027155Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300028027Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FCEnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033994Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
NpDRAFT_1046972333300000929Freshwater And MarineMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTV
GOS2228_103851013300001948MarineMENLKIYESFISYINEGKAQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPVNDIRKKATSMLAFAGNWPSEGKDT
B570J29032_10995382343300002408FreshwaterMENLKLYESFVEDINEAKAQKGLMHKLLDIPADKKISDVYKNTKEGAEDLAHDLLNAVKKSKMVPTKEIRSKATSMLAFAGNWPSEGKNTVIDKALKSIKNIEIPGVPVSGK*
B570J40625_10041258623300002835FreshwaterMIEVVLRYIIERTKKHKMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS*
JGI26088J50261_1001397103300003409MarineMENLKLYESFLVEINEAKVEKGLMHKLLNVPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK*
JGI26084J50262_1001127133300003427MarineMENLKLYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIGIPGVPISGK*
JGI26083J51738_1000328743300003621MarineMENLKLYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIXIPGVPISGK*
Ga0007787_1023182913300004240Freshwater LakeERTKKHKMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS*
Ga0007787_1050912223300004240Freshwater LakeMENLKLYESFTEELNEAKVAKGLMHKLLGIQPDEKIATKYKSGEELAHDLLTAVKKAKIVPQKDIRKKATSMLAFAGNWPSEGKNTVIDKALAAIKKIEIPGVPLN*
Ga0049080_1001460013300005582Freshwater LenticMENLKLYESFVEEINEAKAEKGLMHKLLNIPAEKKISEVYKNTKDGAQDLAHDLLTAVKKAKIVAMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKAIEIPGVPLSDK*
Ga0049080_1003049333300005582Freshwater LenticMENLKLYESFIEEINEAKLAKGLMHKLLGIQPDEKIASKYKSGEDLAHDLLTAVKKAKIVPQKDIRKKATSMLAFAGNWPSEGKDTVIDKALTAIKKIEIPGVPLS*
Ga0075478_1026449323300006026AqueousMENLKLYESFVEEINEAKVKKGLMHDLLDIPQDKKISDVYKNTKEDAEELAHDLLNAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSNK*
Ga0070754_1000052073300006810AqueousMENLKIYESFVSDINEGKAQKGLMHKLLGIPRQDKISSKYSNDMESAKELAFDLLTALKKDKIVPVKDIRKKATSMLAFAGNWPSEGNDTVIDKALKAIKDIEIPGVPLSDRNKKD*
Ga0070754_1000069573300006810AqueousMENLKIYESFISDINEGKAQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPIKDIRKKATSMLAFAGNWPSEGKDTVIDKALNAIKDIEIPGVPLSDRNKKD*
Ga0070754_1000350033300006810AqueousMENLKIYESFVEDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDKED*
Ga0070754_1003221823300006810AqueousMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDAYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSNK*
Ga0075481_1015709733300006868AqueousMENLKIYESFISDINEGKAQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPIKDIRKKATSMLAFAGNWPSEGKDTVIDKA
Ga0075477_1004110123300006869AqueousMENLKIYESFISDINEGKTQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPIKDIRKKATSMLAFAGNWPSEGKDTVIDKALNAIKDIEIPGVPLSDRNKKD*
Ga0075479_1031680213300006870AqueousENPIMENLKIYESFVSDINEGKAQKGLMHKLLGIPRQDKISSKYSNDMESAKELAFDLLTALKKDKIVPVKDIRKKATSMLAFAGNWPSEGNDTVIDKALKAIKDIEIPGVPLSDRNKKD
Ga0070746_1006023313300006919AqueousMENLKLYESFVEEINEAKVKKGLMHDLLDIPQDKKISDVYKNTKEDAEELAHDLLNAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVMDKALKAIKNIEIPGVPLSNKNLDILLTI
Ga0070745_1000401173300007344AqueousLIYNSNKEINKMENLKIYESFVEDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDKED*
Ga0070745_100875013300007344AqueousMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDAYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKI
Ga0070752_102001013300007345AqueousIYESFIEDINEAKVQKGLMHKLLNIPAGDKISSAYKNTKEGAEDLAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDK*
Ga0099849_103088433300007539AqueousMENLKIYESFISDINEGKAQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPIKDIRKKATSMLAFAGNWPSEGKDTVIDKALNAIKDIEIPGVPLSDRHKKD*
Ga0102918_101529413300007593EstuarineFESFVENINEAEKGLMHKLLDIPQDKKISDVYKSGDVLATDLLRAVKNSKIVPVKDIRRKATSMLAFAGNWPSEGKNTVIDKALKAIKDIEIPGIPVK*
Ga0102921_131103023300007603EstuarineLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS*
Ga0070751_1000592103300007640AqueousLIYNSNKEINKMENLKIYESFVEDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKISVIDKALKAIKKIEIPGVPLSDKED*
Ga0070751_100258253300007640AqueousMENLKIYESFIEDINEAKVQKGLMHKLLNIPAGDKISSAYKNTKEGAEDLAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDK*
Ga0075480_1053157223300008012AqueousDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDKED*
Ga0108970_1005626753300008055EstuaryMENLKLYESFVEEINEAKIAKGLMHKLLDVPAGEKISSKYKSGEELAHDLLTAVKKAKIVADKDVRKKATSMLAFAGNWPSEGENTVIDKALKAIKKLEIPGVPLN*
Ga0108970_1109762443300008055EstuaryIYNRKNKKHKMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS*
Ga0114346_106259823300008113Freshwater, PlanktonMENLKLYESFVEDINEAKAQKGLMHKLLDIPADKKISDVYKNTKEGAEDLAHDLLNAVKKSKMVPTKEIRSKATSMLAFAGNWPSEGKNTVIDKALKAIKNIEIPGVPVSGK*
Ga0114350_115486923300008116Freshwater, PlanktonMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS*
Ga0114364_106070013300008267Freshwater, PlanktonMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNA
Ga0102829_125315523300009026EstuarineMENLKLYESYIEEINEAKLAKGLMHKLLGIEPDEKIASKYKSGEELAHDLLTAVKKAKIVPQKDIRKKATSMLAFAGNWPSEGKDTVIDKALTAIKNIEIPGVPLS*
Ga0114918_1002248963300009149Deep SubsurfaceMENLKIYESFLEEINEAKVEKGLMHKLLDIPQGDKISSAYKNTKDGAEELAFDLLTAVKKSKIVPIKDVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPVSDK*
Ga0105097_1044866633300009169Freshwater SedimentVGEINEAKAQKGLMHKLLDIPAEKKISDVYKNTKEGAEDLAHDLLTAVKKAKLVPMKEIRSKATSMLAFAGNWPSEGKNSVIDKALKAIKDIEIPGVPVSGK*
Ga0114982_115615923300009419Deep SubsurfaceMKNIMLFESFMDSLNEAEKGLMHKILNVPEDKEIGDVYKDGEDLAKSILIGVKKSKIVPLKDVRKKATSMIAFAANWPSKSGKNIFKKALSSIKKIEIPGVPLTDNK*
Ga0115546_118560833300009435Pelagic MarineVLVFLIYNSNGKITKMENLKLYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK*
Ga0115567_1051007323300009508Pelagic MarineVFLIYNSNGKITKMENLKLYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK*
Ga0129333_1001928933300010354Freshwater To Marine Saline GradientMDNLKLYENFQQELNEAKVAKGLMHQLLGIPDSEKISTKYKSGEDLARDLLNAIKKKKIVPAKDVRKKATSMLAFAANWPSEGKNTVIDRALSAIKKIEVPGVPLT*
Ga0136549_1039740113300010389Marine Methane Seep SedimentMENLKLYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK*
Ga0153800_101798713300011995FreshwaterMENLKLYESFIEEINEAKLAKGLMHKLLGIQPDEKIASKYKSGEELAHDLLTAVKKAKIVPQKDIRKKATSMLAFAGNWPSEGKDTVIDKALTAIKKIEIPGVPLS*
Ga0164293_1060120513300013004FreshwaterEAKAQKGLMHKLLDIPADKKISDVYKNTKEGAEDLAHDLLNAVKKSKMVPTKEIRSKATSMLAFAGNWPSEGKNTVIDKALKSIKNIEIPGVPVSGK*
(restricted) Ga0172365_1007370443300013127SedimentVTEYIIQIKENQKMENIKLYESFIEEINEAKVAKGLMHKLLDVPDGEKISSKYKSGEELAHDLLTAVKKAKIVADKDVRKKATSMLAFAGNWPSEGENTVIDKALKAIKKLEIPGVPLN*
Ga0177922_1109309953300013372FreshwaterMIYNHKSKKIEKMKNIQLFESFVENINEAEKGLMHKLLDIPQDKKISDVYKSGDVLATDLLRAVKNSKIVPVKDIRRKATSMLAFAGNWPSEGKNTVIDKALKAIKDIEIPGVPVK*
Ga0182082_137759723300016771Salt MarshLMHKLLNIPAGDKISSAYKNTKEGAEELAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDK
Ga0169931_1003087233300017788FreshwaterVTEYIIQIKENQKMENIKLYESFIEEINEAKVAKGLMHKLLDVPDGEKISSKYKSGEELAHDLLTAVKKAKIVADKDVRKKATSMLAFAGNWPSEGENTVIDKALKAIKKLEIPGVPLN
Ga0181565_1001004023300017818Salt MarshMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDAYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSNK
Ga0181584_10000704283300017949Salt MarshMENLKIYESFIEDINEAKVQKGLMHKLLNIPAGDKISSAYKNTKEGAEELAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDK
Ga0181607_1008522233300017950Salt MarshMENLKIYESFISDINEGKAQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPIKDIRKKATSMLAFAGNWPSEGKDTVIDKALNAIKDIEIPGVPLSDRNKKV
Ga0181571_1033403433300017957Salt MarshMENLKIYESFIEDINEAKVQKGLMHKLLNIPAGDKISSAYKNTKEGAEELAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVID
Ga0181585_1002518813300017969Salt MarshGLMHKLLNIPAGDKISSAYKNTKEGAEELAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDK
Ga0180431_1001343223300017987Hypersaline Lake SedimentMENLKIYESFVQDINEAKAQKGLMHKLLDIPAEKKISSAYKNTKEGGEELAHDLLTAVKKAGIVPIGKVRSKATSMLAFAGNWPNEGKNSVIDKALKAIKKTEIPGVPLSDKKD
Ga0180433_1004186063300018080Hypersaline Lake SedimentMENLKIYESFVQDINEAKAQKGLMHKLLDIPSEKKISSAYKNTKEGGEELAHDLLTAVKKAGIVPIGKVRSKATSMLAFAGNWPNEGKNSVIDKALKAIKKTEIPGVPLSDKKD
Ga0180433_1004822873300018080Hypersaline Lake SedimentMENLKIYESFVEDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDKED
Ga0181568_1146175223300018428Salt MarshMENLKIYESFIEDINEAKVQKGLMHKLLNIPAGDKISSAYKNTKEGAEELAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALK
Ga0181554_118267733300020052Salt MarshMKKIKLFESFIETINEAKAEKGLMHKLLDIPQDKKISDVYKSGDVLATDLLRAVKNAKIVPAKDIRRKATSMLAFAGNWPSEGKNTVIDKALKSIKDIEIPGVPLK
Ga0211736_1080548343300020151FreshwaterMENLKLYESFISELNEAKAERGLMHKLLDIPAEKKISEVYKNTKDGAKELAHDLLTAVKKSKKVPAKEIRSKATSMLAFAGNWPSEGKNTVIDKALKEIKDIEIPGVPVSEK
Ga0211734_1028425843300020159FreshwaterMENLKLYESFISELNEAKAERGLMHKLLDIPAEKKISEVYKNTKDGAKELAHDLLTAVKKSKKVPAKEIRSKATSMLAFAGNWPSEGKNTVIDKALKAIKEIEIPGVPVSEK
Ga0211733_1056969713300020160FreshwaterLQIYNRKNKKHKMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS
Ga0211726_1063544853300020161FreshwaterMDNLKIYESFVEEVNEAKVAKGLMHKLLDVPDGEKISTKYKSGEELATELLKAVKKAKIVADKDVRKKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLS
Ga0211726_1066464773300020161FreshwaterMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS
Ga0211735_1041423713300020162FreshwaterMDNLKIYESFVEEVNEAKVAKGLMHKLLDVPDGEKISTKYKSGEELATELLKAVKKAKIVADKDVRKKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGV
Ga0181556_128337523300020176Salt MarshMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDAYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPG
Ga0181573_1045360323300020184Salt MarshEAKVQKGLMHKLLNIPAGDKISSAYKNTKEGAEELAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDK
Ga0208223_100928533300020519FreshwaterMDSFFEFNWSILFVFMIYNHKSKKIEKMKNIQLFESFVENINEAEKGLMHKLLDIPQDKKISDVYKSGDVLATDLLRAVKNSKIVPVKDIRRKATSMLAFAGNWPSEGKNTVIDKALKAIKDIEIPGVPVK
Ga0208485_103738133300020573FreshwaterAQKGLMHKLLDIPADKKISDVYKNTKEGAEDLAHDLLNAVKKSKMVPTKEIRSKATSMLAFAGNWPSEGKNTVIDKALKSIKNIEIPGVPVSGK
Ga0213867_127197913300021335SeawaterMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDTYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSNK
Ga0213860_1008033913300021368SeawaterMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDTYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTV
Ga0222718_1001399883300021958Estuarine WaterMENLKLYESFVEEINEAKAKKGLMHELLDIPQDKKISSAYNNTKEGADELAHDLLTAVKKSKMVPMKEVRSKATSMLAFAGNWPNEGKNTVIDKALKAIKKIEIPGVPLSDQ
Ga0222714_1026960223300021961Estuarine WaterMENIKLYESFVEDINEAKIAKGLMHKLLDVPAGEKISSKYKSGEELAHDLLTAVKKAKIVADKDVRKKATSMLAFAGNWPSEGENTVIDKALKAIKKLEIPGVPLN
Ga0222713_1020376323300021962Estuarine WaterMDNLKLYESFVEEINEAKIAKGLMHKLLEVPAGEKISSKYKSGEELAHDLLTAVKKAKIVADKDVRKKATSMLAFAGNWPSEGENTVIDKALKAIKKLEIPGVPLN
Ga0212028_101007833300022071AqueousMENLKLYESFVEEINEAKVKKGLMHDLLDIPQDKKISDVYKNTKEDAEELAHDLLNAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSNK
Ga0196899_101160613300022187AqueousSFISDINEGKAQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPIKDIRKKATSMLAFAGNWPSEGKDTVIDKALNAIKDIEIPGVPLSDRNKKD
Ga0255756_115568413300022905Salt MarshIIQIRKLLKMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDAYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSN
Ga0214919_1009807623300023184FreshwaterMKNLDNLLLFESFVSDINEAEKGLMHRLLKIPADKKISDVYKSGEELARDLLTAVKKSKLVPAKDTRRKATSMLAFAGNWPNEGKNTVIDKALDAIKDIEIAGVPANK
Ga0244776_1010119023300024348EstuarineMDSFFEFNWSILFVFMIYNHKSKKIEKMKNVQLFESFVENINEAEKGLMHKLLDIPQDKKISDVYKSGDVLATDLLRAVKNSKIVPVKDIRRKATSMLAFAGNWPSEGKNTVIDKALKAIKDIEIPGIPVK
Ga0244776_1057361513300024348EstuarineENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS
Ga0209654_1000390293300025608MarineMENLKLYESFLVEINEAKVEKGLMHKLLNVPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK
Ga0209654_107329733300025608MarineMENIKIYESFLEDINEAKVEKGMMHKLLNIPDDKKISSTYKNSKESAEELAHDLLTAVKKAGIVPISKVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSQG
Ga0209136_104371333300025636MarineMENLKLYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIGIPGVPISGK
Ga0208898_1000160293300025671AqueousMENLKIYESFVSDINEGKAQKGLMHKLLGIPRQDKISSKYSNDMESAKELAFDLLTALKKDKIVPVKDIRKKATSMLAFAGNWPSEGNDTVIDKALKAIKDIEIPGVPLSDRNKKD
Ga0208898_1000904173300025671AqueousMENLKIYESFISDINEGKAQKGLMHKLLGIPRQEKISSKYSNTPESAKELAFDLLTALKKDKVVPIKDIRKKATSMLAFAGNWPSEGKDTVIDKALNAIKDIEIPGVPLSDRNKKD
Ga0209652_108097533300025684MarineMENLKLYESFLEELNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAGELAFDILTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK
Ga0209532_123256923300025696Pelagic MarineMENLKLYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK
Ga0209771_121216313300025701MarineYESFLEDLNEAKVEKGLMHKLLDIPQGDKISSAYKNTKEGAEELAFDLLTAVKKAKIVPIKEVRSKATSMLAFAGNWPSEGKNTVIDKALKLIKNIEIPGVPISGK
Ga0208150_101132663300025751AqueousMENLKIYESFVEDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLS
Ga0208150_103700733300025751AqueousYESFVEEINEAKVKKGLMHDLLDIPQDKKISDVYKNTKEDAEELAHDLLNAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSNK
Ga0208150_112151123300025751AqueousMENLKIYESFVSDINEGKAQKGLMHKLLGIPRQDKISSKYSNDMESAKELAFDLLTALKKDKIVPVKDIRKKTTSMLAFAGNWPSEGNDTVIDKALKAIKDIEIPGVPLSDRNKKD
Ga0208427_113698633300025771AqueousMENLKLYESFVEEINEAKVKKGLMHDLLDIPQDKKISDVYKNTKEDAEELAHDLLNAVKKAKLVPMKEVRSKATSMLAFAGNWPSEGKNT
Ga0255071_101723713300027127FreshwaterMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIE
Ga0255083_108304413300027153FreshwaterIFHDXSCLKIYNRKNKKHKMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS
Ga0255081_110314123300027155FreshwaterLKIYNRKNKKHKMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS
Ga0208974_115621423300027608Freshwater LenticMENLKLYESFIEEINEAKLAKGLMHKLLGIQPDEKIASKYKSGEDLAHDLLTAVKKAKIVPQKDIRKKATSMLAFAGNWPSEGKDTVIDKALTAIKKIEIPGVPLS
Ga0209358_1029076413300027804Freshwater LakeMENLKLYESFTEELNEAKVAKGLMHKLLGIQPDEKIATKYKSGEELAHDLLTAVKKAKIVPQKDIRKKATSMLAFAGNWPSEGKNTVIDKALAAIKKIEIPGVPLN
Ga0247722_1021468823300028027Deep Subsurface SedimentMKNIMLFESFMDSLNEAEKGLMHKILNVPEDKEIGDVYKDGEDLAKSILIGVKKSKIVPLKDVRKKATSMIAFAANWPSKSGKNIFKKALSSIKKIEIPGVPLTDNK
Ga0315900_1100564223300031787FreshwaterMENLKLYESFVEDINEAKAQKGLMHKLLDIPADKKISDVYKNTKEGAEDLAHDLLNAVKKSKMVPTKEIRSKATSMLAFAGNWPSEGKNTVIDKALKAIRDIEIPGVPVSGK
Ga0315909_1023651533300031857FreshwaterMENLKLYESFVEDINEAKAQKGLMHKLLDIPADKKISDVYKNTKEGAEDLAHDLLNAVKKSKMVPTKEIRSKATSMLAFAGNWPSEGKNTVIDKALKSIKNIEIPGVPVSGK
Ga0315901_1092069023300031963FreshwaterMENLKLYESFVEDINEAKAQKGLMHKLLDIPADKKISDVYKNTKEGAEDLAHDLLNAVKKSKMVPTKEIRSKATSMLAFAGNWPSEGKNTVIDKALKAIKDIEIPGVPVSGK
Ga0316625_10208387613300033418SoilMLFESFVDSINEAEKGLMHKILNIPADKKISDVYKSGEELAKDMLTAVRKKKLVPAKDVRKKATSMLAFAANWPSEGKNSVIDKALKQIPKIEIPGVPLSK
Ga0334996_0143766_483_8033300033994FreshwaterMENLKLYESFTEELNEAKVAKGLMHKLLGIQPDEKIASKYKSGEELAHDLLTAVKKAKIVPQKDIRKKATSMLAFAGNWPSEGKNTVIDKALAAIKKIEIPGVPLN
Ga0334996_0162843_774_10943300033994FreshwaterMENLKLYESFFDELNEGKVAKGLMHKLLEVPEGEKISSKYKSGEELAHDLLVAVKKAKIVADKDVRKKATSMLAFAGNWPSEGKNTVIDKALRAIKKIEIPGVPLN
Ga0310130_0020682_1180_15183300034073Fracking WaterMENLKIYEGFIFDLNESKAQKGLMHKLLGIPRQQKISDKYSNSADGAKELAHDLLTAVKKEKIVPIKEVRKKATSMLAFAANWPSEGKNSVIDKALDAIKDLEIPGVPVSRK
Ga0335027_0057065_3_2693300034101FreshwaterMENLKLYESFFDELNEGKVAKGLMHKLLEVPEGEKISSKYKSGEELAHDLLVAVKKAKIVADKDVRKKATSMLAFAGNWPSEGKNTVID
Ga0335068_0076768_794_11653300034116FreshwaterMIEVVLRYIIERTKKHKMENLKLYESFVEDINEAKVAKGLMHKLLGIQPGEKIASKYKSGEELAHDLLVAVKKAKIVAEKDIRKKATSMLAFAGNWPSEGKGTVIDKALNAIKKIEIPGVPLS
Ga0348335_000182_23254_236313300034374AqueousLIYNSNKEINKMENLKIYESFVEDINEAKVQKGLMHKLLDIPAGDKISSAYKNTKEGAEELAHDLLNAVKKAGIVPIGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDKED
Ga0348336_074870_55_3933300034375AqueousMENLKLYESFVEEINEAKIKKGLMHDLLNIPQDKKISDAYKNTKEDAEELAHDLLTAVKKAKLVPMKEVRSKATWMLAFAGNWPSEGKNTVIDKALKAIKKIEIPGVPLSNK
Ga0348337_004761_5237_55753300034418AqueousMENLKIYESFIEDINEAKVQKGLMHKLLNIPAGDKISSAYKNTKEGAEDLAHDLLTAVKKDGMVPLGKVRSKATSMLAFAGNWPSEGKNSVIDKALKAIKKIEIPGVPLSDK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.