Metagenome / Metatranscriptome Family F088458

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Overview

Basic Information
Family ID	F088458
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	97 residues
Representative Sequence	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAI
Number of Associated Samples	73
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	96.33 %
% of genes from short scaffolds (< 2000 bps)	92.66 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.459 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.862 % of family members)
Environment Ontology (ENVO)	Unclassified (65.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.48% β-sheet: 0.00% Coil/Unstructured: 59.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00072	Response_reg	5.50
PF04392	ABC_sub_bind	4.59
PF08238	Sel1	2.75
PF07969	Amidohydro_3	1.83
PF03401	TctC	0.92
PF12832	MFS_1_like	0.92
PF13548	DUF4126	0.92
PF02838	Glyco_hydro_20b	0.92
PF13431	TPR_17	0.92
PF14534	DUF4440	0.92
PF01464	SLT	0.92
PF02558	ApbA	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.59
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.92
COG3525	N-acetyl-beta-hexosaminidase	Carbohydrate transport and metabolism [G]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
All Organisms	root	All Organisms	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
cellular organisms	root	All Organisms → cellular organisms	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.62 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.28 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.26 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.44 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.83 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.17 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.92 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.92 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	6.42 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.83 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	0.92 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1034461	Not Available	927	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1046535	Not Available	780	Open in IMG/M
3300004281\|Ga0066397_10082965	Not Available	643	Open in IMG/M
3300005332\|Ga0066388_104844051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	684	Open in IMG/M
3300005332\|Ga0066388_104945556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300005363\|Ga0008090_10132559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1939	Open in IMG/M
3300005713\|Ga0066905_100636404	Not Available	907	Open in IMG/M
3300005764\|Ga0066903_101112589	Not Available	1458	Open in IMG/M
3300005764\|Ga0066903_101114676	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1456	Open in IMG/M
3300005764\|Ga0066903_101255224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1380	Open in IMG/M
3300005764\|Ga0066903_104766722	Not Available	721	Open in IMG/M
3300005764\|Ga0066903_105816918	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300005937\|Ga0081455_10124535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2025	Open in IMG/M
3300005937\|Ga0081455_10197414	Not Available	1510	Open in IMG/M
3300006028\|Ga0070717_11023298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	752	Open in IMG/M
3300006844\|Ga0075428_101056026	Not Available	859	Open in IMG/M
3300006845\|Ga0075421_100589749	Not Available	1307	Open in IMG/M
3300006845\|Ga0075421_101448818	Not Available	753	Open in IMG/M
3300006846\|Ga0075430_100837321	Not Available	758	Open in IMG/M
3300006847\|Ga0075431_100878311	Not Available	867	Open in IMG/M
3300009100\|Ga0075418_10315240	Not Available	1668	Open in IMG/M
3300010046\|Ga0126384_11303446	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010047\|Ga0126382_11677662	Not Available	592	Open in IMG/M
3300010358\|Ga0126370_10228556	Not Available	1427	Open in IMG/M
3300010358\|Ga0126370_11623814	Not Available	619	Open in IMG/M
3300010366\|Ga0126379_10346168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1514	Open in IMG/M
3300010366\|Ga0126379_11637504	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010376\|Ga0126381_103249941	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300010398\|Ga0126383_10449414	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300010398\|Ga0126383_10576112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1194	Open in IMG/M
3300010398\|Ga0126383_11695679	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300012948\|Ga0126375_11773144	Not Available	538	Open in IMG/M
3300012971\|Ga0126369_13317029	Not Available	527	Open in IMG/M
3300015372\|Ga0132256_101710714	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300016294\|Ga0182041_10466460	Not Available	1088	Open in IMG/M
3300016294\|Ga0182041_10883064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300016294\|Ga0182041_11387974	Not Available	644	Open in IMG/M
3300016319\|Ga0182033_11951344	Not Available	534	Open in IMG/M
3300016341\|Ga0182035_10575283	Not Available	971	Open in IMG/M
3300016341\|Ga0182035_10642851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	920	Open in IMG/M
3300016341\|Ga0182035_11652387	Not Available	578	Open in IMG/M
3300016341\|Ga0182035_11878154	Not Available	543	Open in IMG/M
3300016357\|Ga0182032_10850553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300016357\|Ga0182032_11113156	Not Available	678	Open in IMG/M
3300016371\|Ga0182034_10109603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1998	Open in IMG/M
3300016371\|Ga0182034_11445618	Not Available	602	Open in IMG/M
3300016422\|Ga0182039_11095037	Not Available	717	Open in IMG/M
3300016445\|Ga0182038_11205742	Not Available	675	Open in IMG/M
3300018081\|Ga0184625_10419723	Not Available	688	Open in IMG/M
3300018469\|Ga0190270_13013689	Not Available	533	Open in IMG/M
3300026555\|Ga0179593_1120087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3086	Open in IMG/M
3300031545\|Ga0318541_10291171	Not Available	909	Open in IMG/M
3300031564\|Ga0318573_10095895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1517	Open in IMG/M
3300031572\|Ga0318515_10090920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1593	Open in IMG/M
3300031573\|Ga0310915_10074648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2241	Open in IMG/M
3300031573\|Ga0310915_10661951	Not Available	738	Open in IMG/M
3300031668\|Ga0318542_10119835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1286	Open in IMG/M
3300031681\|Ga0318572_10166265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1279	Open in IMG/M
3300031681\|Ga0318572_10499774	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031719\|Ga0306917_10383011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1096	Open in IMG/M
3300031724\|Ga0318500_10065279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1585	Open in IMG/M
3300031724\|Ga0318500_10092780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1362	Open in IMG/M
3300031744\|Ga0306918_10514366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	937	Open in IMG/M
3300031744\|Ga0306918_11425471	Not Available	530	Open in IMG/M
3300031747\|Ga0318502_10091724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1671	Open in IMG/M
3300031748\|Ga0318492_10732567	Not Available	530	Open in IMG/M
3300031768\|Ga0318509_10316668	Not Available	873	Open in IMG/M
3300031777\|Ga0318543_10143515	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300031778\|Ga0318498_10086851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1413	Open in IMG/M
3300031779\|Ga0318566_10524284	Not Available	579	Open in IMG/M
3300031782\|Ga0318552_10051450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1953	Open in IMG/M
3300031782\|Ga0318552_10368866	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031793\|Ga0318548_10558935	Not Available	557	Open in IMG/M
3300031805\|Ga0318497_10185313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300031821\|Ga0318567_10261540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	973	Open in IMG/M
3300031833\|Ga0310917_10271126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1144	Open in IMG/M
3300031835\|Ga0318517_10034419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2054	Open in IMG/M
3300031846\|Ga0318512_10196652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	985	Open in IMG/M
3300031846\|Ga0318512_10694246	Not Available	521	Open in IMG/M
3300031879\|Ga0306919_10050944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2739	Open in IMG/M
3300031879\|Ga0306919_10301467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1216	Open in IMG/M
3300031879\|Ga0306919_10527918	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300031890\|Ga0306925_10504145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300031890\|Ga0306925_11531613	Not Available	651	Open in IMG/M
3300031910\|Ga0306923_11706528	Not Available	650	Open in IMG/M
3300031912\|Ga0306921_10715057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1150	Open in IMG/M
3300031912\|Ga0306921_11932394	Not Available	630	Open in IMG/M
3300031941\|Ga0310912_10299149	Not Available	1245	Open in IMG/M
3300031941\|Ga0310912_11432313	Not Available	521	Open in IMG/M
3300031945\|Ga0310913_10496551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	866	Open in IMG/M
3300031945\|Ga0310913_10816338	Not Available	657	Open in IMG/M
3300031946\|Ga0310910_10115718	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300031947\|Ga0310909_10699212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	842	Open in IMG/M
3300031954\|Ga0306926_12147943	Not Available	623	Open in IMG/M
3300032001\|Ga0306922_10862052	Not Available	943	Open in IMG/M
3300032001\|Ga0306922_11212876	Not Available	767	Open in IMG/M
3300032043\|Ga0318556_10157114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1175	Open in IMG/M
3300032055\|Ga0318575_10371676	Not Available	725	Open in IMG/M
3300032059\|Ga0318533_10078001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2256	Open in IMG/M
3300032059\|Ga0318533_11390992	Not Available	512	Open in IMG/M
3300032076\|Ga0306924_10622530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1219	Open in IMG/M
3300032089\|Ga0318525_10390082	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300032090\|Ga0318518_10551494	Not Available	589	Open in IMG/M
3300032261\|Ga0306920_101658311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300032261\|Ga0306920_102808887	Not Available	663	Open in IMG/M
3300032261\|Ga0306920_102821163	Not Available	661	Open in IMG/M
3300032261\|Ga0306920_103622202	Not Available	568	Open in IMG/M
3300033289\|Ga0310914_11824409	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.74%
Host-Associated	Host-Associated	8.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.91%
Plants	Host-Associated → Plants	8.26%
Aquatic	Environmental → Aquatic	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.42%
Sediment	Environmental → Aquatic → Sediment	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.73%
Loam	Environmental → Terrestrial → Soil → Loam	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.50%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10344611	3300000655	Forest Soil	MRVSEITALAFLAITVAGFSTRVGSAQTPDLECAQLSNVPDDGTPLAVGLKVLASKKIDPSQAESACRSALRADPANPTFMFLLGRALSLGNKRLEAIKYYLDAVDRGHAGAMNDLG
AF_2010_repII_A100DRAFT_10465351	3300000655	Forest Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGSPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRQEAIK
Ga0066397_100829651	3300004281	Tropical Forest Soil	MRVLELIAPAFLVITLAGFSTRVGSAQTLDLECTQLSYVPDDGTPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALSLGNKRLEAIKYYLDAAGRGHAGAMN
Ga0066388_1048440511	3300005332	Tropical Forest Soil	MRVSEITALAFLAITVAGFSTRVGSAQTPDLECAQLSNVPDDGTPLAVGLKVLASKKIDPSQAASACRSALRADPANPTLMFLLGRALSLGNKRREAIKYYLDAVDRGHAGAMNDLGGVFEYGVGVPK
Ga0066388_1049455561	3300005332	Tropical Forest Soil	MRIWELIAPAFLAITAAGFPAHVGSAQTADLECKQLSNVPDDGTPLKDLASKKIDLSQAEAACRSALRADPTNPTFMFQLGRALSLGNKRREAIKYY
Ga0008090_101325591	3300005363	Tropical Rainforest Soil	MRVWQLIAPAFLAITAAAFSAHVGSAQTPDLQCMQLPNVPDDGTPLAVSLNDLASKKIDPSQAESACRSALRADP
Ga0066905_1006364041	3300005713	Tropical Forest Soil	MLVLELIAPAFLVITLAGFSTHVGRAQTPKLECAQLSNLPDDGSSLAAGPEVVASKKIDPSQVESACRSALRADPANPTFMFHLGRA
Ga0066903_1011125891	3300005764	Tropical Forest Soil	MRGLELIAPAFLAITLAGVSTHVDSAQTSDLECLQFSNMPDDGTPLAAGLKDLAFEKIDPSQAEAACRSALRADPANPTFMFQLGRALSLGNKRLDAIKYY
Ga0066903_1011146765	3300005764	Tropical Forest Soil	MRVWELIAPAFLAVTAAGFSAHVSSAQTPDFECTQLSNVPDDGTPLAVDLKDLAKKIDPSRAEAACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHA
Ga0066903_1012552243	3300005764	Tropical Forest Soil	MRVTRLFARALLAMTAVVFSTHVVGSAQAPEPECTQLLNMPDDGAPLAVSLQGSASENIDRSQAESVCRSALRADPANPASLFHLGRALSLGSKRLEAIKYYLAAADRGHAGAMNDLGGVFEYGIGV
Ga0066903_1047667222	3300005764	Tropical Forest Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCMQLFNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRQEAI
Ga0066903_1058169182	3300005764	Tropical Forest Soil	MRVWELIAPAFLAITAGAFSAHVGSAQTPDLKCAQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSA
Ga0081455_101245351	3300005937	Tabebuia Heterophylla Rhizosphere	MRLPQLIALAFLVVTATGFSAHAQTPDLECARLSNVSDDGVPLAVGLKALASKEIDPSQAESACRSALRSDPA
Ga0081455_101974143	3300005937	Tabebuia Heterophylla Rhizosphere	MRLLELIALAFLVATTTGFSTPAQTPDLECAHLSNVPDDGVPLAVGQKTFASKEIAPSQVETACRSALRADPANPTFMFRLARALFLGNK
Ga0070717_110232981	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRVALAFLVITTAGFSTLGSAQTPGVECRQLSDVFDDSTGLAAGLKVLAPKNIDPSQAESACRSALRADPANPTLMFLLGRSLSLGNKRLEAIRYYLAA
Ga0075428_1010560262	3300006844	Populus Rhizosphere	MRALKLIAPAFLAITTAGFSAHVGGAQTPDLACTQLSNLLDDDAPLAAGLKALASKKIEPSQAEAACRSALRGDPANPTF
Ga0075421_1005897491	3300006845	Populus Rhizosphere	MRVLELIAPAILAITAAGFSAHVGGTPALDLECTQLSKVLDDDAPLAVGLKALASQKIEPSQAEAACRSALRGDPANPTF
Ga0075421_1014488181	3300006845	Populus Rhizosphere	MRLLELIAPAFLAITAAGFSAHVASAQMPDLECTQLSNLLDDDAPLAVGLKALASQKIEPSQAEAACRSALRGDPANPTF
Ga0075430_1008373212	3300006846	Populus Rhizosphere	MRVLELIAPAILAITAAGFSAHVGGTPALDLECTQLSKVLDDDAPLAVGLKALASQKIEPSQAEAACRSALRGDPANPTFMFLLG
Ga0075431_1008783113	3300006847	Populus Rhizosphere	MRVLELIAPAILAITAAGFSAHVGGTPALDLECTQLSKVLDDDAPLAVGLKALASQKIEPSQAEAVCRSALRGDPANPTFM
Ga0075418_103152403	3300009100	Populus Rhizosphere	MRLLKLIAPAFLAITLAGFSTHAGGAQTPDLECTQLSNTPDDGTPLAAAPTDLVSKKIDPSQAEAACRSALRADPANPNFMFLLGRALSLGSKRLEAIKYYLDAANR
Ga0126384_113034461	3300010046	Tropical Forest Soil	MRVSELIALAFLTITFAGLSTHVGIGQTPDLECAQLSNVADDGSPLAVGLKVLASKKIDPLQAESACRSALRADPANPTFMFLLGRALS
Ga0126382_116776621	3300010047	Tropical Forest Soil	MRVSELIALVFLAITAAGFSTHVSSAQTTNLECTQLSSVPDDGTPLAVDLKVLASKKIDPSQAESACRSALRADPANPIFMFLLGRALSLGNKRLE
Ga0126370_102285564	3300010358	Tropical Forest Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSIVPDDGTPLTVGLKVLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGN
Ga0126370_116238141	3300010358	Tropical Forest Soil	MRGLELIAPAFLAITLAGVSTHVDSAQTSDLECLQFSNMPDDGTPLAAGLKDLAFEKIDPSQAEAACRSALRADPANPTFMFQLGRALSLGNKRL
Ga0126379_103461682	3300010366	Tropical Forest Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALFLGNKRLEAIKYYLDAAGRGHSGAMNDL
Ga0126379_116375042	3300010366	Tropical Forest Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGSPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRQEAIKYYLDA
Ga0126381_1032499412	3300010376	Tropical Forest Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGSPLAVGLKDVASKKIDPSQAESACRSALRADPVNPTFMFLLGRA
Ga0126383_104494142	3300010398	Tropical Forest Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLFNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRQEAIK
Ga0126383_105761121	3300010398	Tropical Forest Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDFKCAQLSNVPDDGPPLAVGLNDLAPQKIDPSQAESACRSALRADPVSPTFMFLLGRALSLGNKRLEAIKYY
Ga0126383_116956791	3300010398	Tropical Forest Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGSPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLG
Ga0126375_117731441	3300012948	Tropical Forest Soil	MRVLELIAPAFLVITLAGFSTRVGSAQTLDLECTQLSYVPDDGTPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALSLGNKRLEAIKYYLDAAGRGHAGAMNDLGGV
Ga0126369_133170291	3300012971	Tropical Forest Soil	MRVSELIALAFLAITDTGFSTHVGSAKTPDFECAQLSNVPDDGSPLAVGLKDVASKKIDPSQAESACRSALRADPVNPTFMFLLGR
Ga0132256_1017107141	3300015372	Arabidopsis Rhizosphere	MRVLQLIAPAFLAIAAAAISTQVGRAQTPDLECTQLANWPDDGAPLAVGLKVLASKKLDPSQAEAACRSALR
Ga0182041_104664602	3300016294	Soil	MRVSELIALAFLAITAAAFSAHVGSAQTSDLQCTQLSNVPDDGTPLAVGLKVLASKKIDPSQAESACRSALRADPANPTFMFLLGRALSLGNKRLEAIKYYLDAVDRGHAGAMNDLGGVFEYGV
Ga0182041_108830641	3300016294	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTRLAVDLKVLASKKIDPSQAESACRSALRADPVNPTFMFLL
Ga0182041_113879741	3300016294	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLL
Ga0182033_119513441	3300016319	Soil	MRVWELIAPAVLAITAAAFSAHVGSAQTPDLQCTQLPDLPDDGTPLAVGLNDLASKKIDPSQAESACRSVLRADPANPTFMFQLGRALSLGNKRLEAI
Ga0182035_105752831	3300016341	Soil	MRGLELIAPAFLAITLAGVSTHVDSAQTSDLECLQFSNMPDDGTPLAAGLKDLAFEKIDPSQAEAACRSALRADPANPTFMFLLGRALSLGNKRLE
Ga0182035_106428511	3300016341	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTRLAVDLKVLASKKIDPSQAESACRSALRADPVNPT
Ga0182035_116523871	3300016341	Soil	MRVLGLIALVLLAITAAGFSAHISRAQTPDLECTKLFSNGGTSLSAGLTAPASKTIEPLQAEAACRSALRADPANPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHTGAMHDLGG
Ga0182035_118781541	3300016341	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLL
Ga0182032_108505531	3300016357	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTPLAVDLKVLASKKIDPSQAESACRSALRADPVNPT
Ga0182032_111131561	3300016357	Soil	MRVWELIAPAVLAITAAAFSAHVGSAQTPDLQCTQLPDLPDDGTPLAVGLNDLASKKIDPSQAESACRSALRAD
Ga0182034_101096031	3300016371	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALFLGNKRLEAIKYYLDAAGRGHSGAMNDLGGV
Ga0182034_114456182	3300016371	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTPLAVDLKVLASKKIDPSQAESACRSALRADLVNPTFMFLLGRALSLGNKRLEAIKYYLDA
Ga0182039_110950371	3300016422	Soil	MRVWELIAPAVLAITAAAFSAHVGSAQTPDLQCTQLPDLPDDGTPLAVGLNDLASKKIDPSQAESACRSVLRADPANPTFMFQLGRALSL
Ga0182038_112057421	3300016445	Soil	MRVWELIAPAVLAITAAAFSAHVGSAQTPDLQCTQLPDLPDDGTPLAVGLNDLASKKIDPSQADSACRSALRADPANPTFMFQLGRALSLGNKRLEAIKYYLDAA
Ga0184605_102700721	3300018027	Groundwater Sediment	MRVLELIAPTVLAIAAAGPSTHAGCAQTPILECTQLSNVLDDDTPPAVGLNAPASKKIEPSQAEAACRSALKGDPTNPTFMFQLGRALSL
Ga0184625_104197231	3300018081	Groundwater Sediment	MRVLKLIAPAFLAITTGGFSAHVGGAQTPDLECTQLSNVLDDDAPLAAGLKALASKNIEPSQAEAACRSALRGDPANPTFMFLLGRALSLGNKRLEAMKYYLDAA
Ga0190270_130136891	3300018469	Soil	MRVLELIAPAILAITAAGFSAHVGGTPALDLECTQLSKVLDDDAPLAVGLKALASKKIEPSQAEAA
Ga0179593_11200874	3300026555	Vadose Zone Soil	MRVLQLIAPAVLAIAAAAVSTHVGRAQMPDLQCAQLANVLDDGAPLAAGLKALAFGKIDPSQA
Ga0318541_102911711	3300031545	Soil	MRVSEITALAFLAITVAGFSTRVGSAQTPDLECAQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRQEAIKY
Ga0318573_100958951	3300031564	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLEQIPVEFTHNLRA
Ga0318515_100909203	3300031572	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALFLGNKRLEAIKY
Ga0310915_100746481	3300031573	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKRIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHAGAMNDLGGVFEYG
Ga0310915_106619511	3300031573	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLKVLASKKIDPSQAESACRSALRADPANPTFMFLLGRVLSLGNKRLEAIKYYLDAADRGHAGAMNDLGG
Ga0318542_101198352	3300031668	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVEPACRSALRADPANPTFMFH
Ga0318572_101662651	3300031681	Soil	MRVSEITALAFLAITVAGFSTRVGSAQTPDLECAQLSNVPDDGTPLAAGLKVLASKKIDPSQAESAWRSALRA
Ga0318572_104997741	3300031681	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRG
Ga0306917_103830114	3300031719	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKRIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHAGAMNDL
Ga0318500_100652794	3300031724	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVEPACR
Ga0318500_100927801	3300031724	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHAGAMND
Ga0306918_105143661	3300031744	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKRIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYL
Ga0306918_114254711	3300031744	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKR
Ga0318502_100917244	3300031747	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSAL
Ga0318492_107325671	3300031748	Soil	MRVSEITALAFLAITVAGFSTRVGSAQTPDLECAQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRQEAIKYYLDAADRGH
Ga0318509_103166681	3300031768	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALFLGNKRLEAIKYYLDAAG
Ga0318543_101435152	3300031777	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRVHA
Ga0318498_100868511	3300031778	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNRTFMF
Ga0318566_105242842	3300031779	Soil	MRVSELIAPAFLAITAAGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKKINPSQAESACRSALRADPANPTFMFQLGRALSLGN
Ga0318552_100514503	3300031782	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALFLGNKRLEAIRCRRSRPFGRDE
Ga0318552_103688661	3300031782	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKY
Ga0318548_105589351	3300031793	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCMQLFNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLANKRQEAIKYYLDAADRGHAGAMNDLGGVF
Ga0318497_101853131	3300031805	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVN
Ga0318567_102615402	3300031821	Soil	MRVLELIAPAFLVITLAGFSTHVGRAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPA
Ga0310917_102711263	3300031833	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKRIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAAD
Ga0318517_100344191	3300031835	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYY
Ga0318512_101966521	3300031846	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKRIDPSQAESACRSALRADPV
Ga0318512_106942461	3300031846	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLE
Ga0306919_100509445	3300031879	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALFLGNKRLEAIKYYLDAAGRGHSGAMNDLGGVFEYGI
Ga0306919_103014673	3300031879	Soil	MRVSKITALAFLAITVAGFSTCVDSAQTPDLECAQLSNVPDDGSPLAVGLKVLASQKIDPSQAESACRSALRADPANPTFMFLLGRALSLGNKRVEAIKYYLDAVDRGHAGAMNDLGGV
Ga0306919_105279181	3300031879	Soil	MRVSELIAPAFLAIAAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRQAAIKYYLDAAD
Ga0306925_105041451	3300031890	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKR
Ga0306925_115316131	3300031890	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLANKRQEAIKYYLDAADRGHAGAMNDLGG
Ga0306923_117065282	3300031910	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLANKRQEAIKYYLDAADRGHAGAMNDLGGV
Ga0306921_107150572	3300031912	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTRLAVDLKVLASKKIDPSQAESACRSALRADP
Ga0306921_119323941	3300031912	Soil	MRVSELIAPAFLAIAAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLE
Ga0310912_102991491	3300031941	Soil	MRVSELIALAFLAITAAAFSAHVGSAQTSDLQCTQLSNVPDDGTPLAVGLKVLASKKIDPSQAESACRSALRADPANPTFMFLLGRA
Ga0310912_114323131	3300031941	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLKVLASKKIDPSQAESACRSALRADPANPTFMFLLGRVLSLGNKRLEAIKYYLDAADRGHAGAMNDLGGVFEYG
Ga0310913_104965512	3300031945	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKRIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRG
Ga0310913_108163381	3300031945	Soil	MRVSELIALAFLAITAAAFSAHVGSAQTSDLQCTQLSNVPDDGTPLAVGLKVLASKKIDPSQAESACRSALRADPA
Ga0310910_101157181	3300031946	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFRFHLGRALFLGNKRLEAIKYYLDAAGRGHSGAMNDLGGVFEY
Ga0310909_106992122	3300031947	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTRLAVDLKVLASKKIDPSQAESACRSALRADPVNPTFM
Ga0306926_121479431	3300031954	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCMQLFNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSL
Ga0306922_108620522	3300032001	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLKVLASKKIDPSQAESACRSALRADPANPTFMFLLGRVLSLGNKRLEAIKYYLDAA
Ga0306922_112128761	3300032001	Soil	MRVWKLIAPAFLAITTAAFSAHVGSAQTPDLQCMQLPNVPDDGTPLAVSLNDLASKKIDPSQAESACRSALRADPANPTFMFLLGRVLSLGNKRLEAIKYYLDAADRGHAGAM
Ga0318556_101571143	3300032043	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHAGA
Ga0318575_103716761	3300032055	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGR
Ga0318533_100780016	3300032059	Soil	MRVSELIALAFLAITDTGFSTHVGSAQTPDFECAQLSNVPDDGTPLAVGLNDLASKRIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHAGAMNDLGGVF
Ga0318533_113909921	3300032059	Soil	MRVWELIAPAFLAITAAAFSAHVSNAQTLDFECTQLSNVPDHGTPLAVDLKDLAKKIDPSRAEAACRSALRADPANPTFMFLLGRALSLGDKRLEAIN
Ga0306924_106225301	3300032076	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTPLAVDLKVLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNK
Ga0318525_103900821	3300032089	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAI
Ga0318518_105514941	3300032090	Soil	MRVLELIAPAFLVVTLAGFSTHVGSAQTPKLECAQLSNLPDDGSPLAAGLEVLASKKIDPSQVESACRSALRADPANPTFMFHLGRALFLGNKRLEAIKYY
Ga0306920_1016583111	3300032261	Soil	MRVSELIALVFLAITTAGFSTHVSSAQTTNLECTQLSSVPDDGTRLAVDLKVLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNK
Ga0306920_1028088872	3300032261	Soil	MRVLGLIALVPLAITAAGFSAHISRAQTPDLECTKLFSNGGTSLSAGLTAPASKTIEPLQAEAACRSALKADPANPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHTGAMHDLGGV
Ga0306920_1028211631	3300032261	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCMQLPNVPDDGTPLAAGLKVLASKKIDPSQAESACRSALRADPA
Ga0306920_1036222021	3300032261	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAAGLNDLASKKIDPSQAESACRSALRADPVNPTFMFLLGRALSLGNKRLEAIKYYLDAADRGHAGAMNDLGG
Ga0310914_118244091	3300033289	Soil	MRVWELIAPAFLAITAAAFSAHVGSAQTPDLQCTQLPNVPDDGTPLAVGLNDLASKKIDPSQAESACRSALRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088458

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences