Metagenome Family F088396

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088396
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	109 residues
Representative Sequence	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRIHLDTLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP
Number of Associated Samples	88
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.46 %
% of genes near scaffold ends (potentially truncated)	37.61 %
% of genes from short scaffolds (< 2000 bps)	82.57 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.459 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere (11.927 % of family members)
Environment Ontology (ENVO)	Unclassified (53.211 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.220 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.31% β-sheet: 0.00% Coil/Unstructured: 38.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.76622
a.47.2.1: t-snare proteins	d1ez3a_	1ez3	0.74563
a.191.1.1: Methenyltetrahydrofolate cyclohydrolase-like	d1o5ha_	1o5h	0.70942
a.47.1.1: STAT	d1bg1a1	1bg1	0.70596
a.24.2.0: automated matches	d4z9ha_	4z9h	0.70189

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13924	Lipocalin_5	6.42
PF13088	BNR_2	4.59
PF00132	Hexapep	4.59
PF11074	DUF2779	3.67
PF03458	Gly_transporter	1.83
PF13676	TIR_2	1.83
PF00069	Pkinase	1.83
PF01594	AI-2E_transport	1.83
PF00135	COesterase	1.83
PF13328	HD_4	0.92
PF08663	HalX	0.92
PF04977	DivIC	0.92
PF00004	AAA	0.92
PF01590	GAF	0.92
PF00144	Beta-lactamase	0.92
PF00355	Rieske	0.92
PF04389	Peptidase_M28	0.92
PF07504	FTP	0.92
PF13360	PQQ_2	0.92
PF14067	LssY_C	0.92
PF00383	dCMP_cyt_deam_1	0.92
PF03552	Cellulose_synt	0.92
PF00583	Acetyltransf_1	0.92
PF00582	Usp	0.92
PF02211	NHase_beta	0.92
PF00106	adh_short	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.34
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.83
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	1.83
COG2860	Uncharacterized membrane protein YeiH	Function unknown [S]	1.83
COG1215	Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase	Cell motility [N]	0.92
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.92
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.92
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.92
COG2919	Cell division protein FtsB	Cell cycle control, cell division, chromosome partitioning [D]	0.92
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	0.92
COG4839	Cell division protein FtsL	Cell cycle control, cell division, chromosome partitioning [D]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
All Organisms	root	All Organisms	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
cellular organisms	root	All Organisms → cellular organisms	49.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.79 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.50 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.83 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.83 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.75 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.83 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.83 %
Candidatus Woesearchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota	0.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.83 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.92 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.92 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.83 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.92 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.92 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.92 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.83 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.92 %
Kytococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Kytococcaceae	0.92 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.92 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.92 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.83 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.92 %
Pseudomonas psychrotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas psychrotolerans	0.92 %
Kytococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Kytococcaceae → Kytococcus	0.92 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.92 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.46 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	2.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.75 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.83 %
Kytococcus sedentarius	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Kytococcaceae → Kytococcus → Kytococcus sedentarius	0.92 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.92 %
Pseudomonas psychrotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas psychrotolerans	0.92 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.92 %
Candidatus Woesearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	0.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102658575	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300000956\|JGI10216J12902_120950335	Not Available	760	Open in IMG/M
3300004157\|Ga0062590_100089309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1904	Open in IMG/M
3300004157\|Ga0062590_101660484	Not Available	649	Open in IMG/M
3300004463\|Ga0063356_101712652	Not Available	940	Open in IMG/M
3300004643\|Ga0062591_100895541	Not Available	831	Open in IMG/M
3300005330\|Ga0070690_101059559	Not Available	641	Open in IMG/M
3300005331\|Ga0070670_100025386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5099	Open in IMG/M
3300005331\|Ga0070670_100048192	All Organisms → cellular organisms → Bacteria	3667	Open in IMG/M
3300005333\|Ga0070677_10025733	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300005335\|Ga0070666_10068548	Not Available	2411	Open in IMG/M
3300005340\|Ga0070689_100063890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2864	Open in IMG/M
3300005340\|Ga0070689_102120720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas psychrotolerans	515	Open in IMG/M
3300005344\|Ga0070661_100075844	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300005353\|Ga0070669_100139160	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300005353\|Ga0070669_100780995	Not Available	811	Open in IMG/M
3300005354\|Ga0070675_100034131	All Organisms → cellular organisms → Bacteria	4127	Open in IMG/M
3300005354\|Ga0070675_100300356	All Organisms → cellular organisms → Bacteria → Acidobacteria	1414	Open in IMG/M
3300005356\|Ga0070674_100006045	All Organisms → cellular organisms → Bacteria → Proteobacteria	7040	Open in IMG/M
3300005356\|Ga0070674_100384771	Not Available	1142	Open in IMG/M
3300005356\|Ga0070674_101136452	Not Available	691	Open in IMG/M
3300005364\|Ga0070673_100817738	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005365\|Ga0070688_100616984	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300005366\|Ga0070659_101501895	Not Available	600	Open in IMG/M
3300005455\|Ga0070663_100047749	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300005456\|Ga0070678_102045022	Not Available	542	Open in IMG/M
3300005457\|Ga0070662_101109324	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005543\|Ga0070672_100267763	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1442	Open in IMG/M
3300005544\|Ga0070686_101138368	Not Available	646	Open in IMG/M
3300005548\|Ga0070665_101316300	Not Available	732	Open in IMG/M
3300005578\|Ga0068854_100940834	Not Available	762	Open in IMG/M
3300005618\|Ga0068864_100538048	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300005840\|Ga0068870_10797589	Not Available	660	Open in IMG/M
3300005840\|Ga0068870_10957360	Not Available	608	Open in IMG/M
3300005844\|Ga0068862_101298656	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006881\|Ga0068865_101869014	Not Available	543	Open in IMG/M
3300006918\|Ga0079216_11347706	Not Available	586	Open in IMG/M
3300007004\|Ga0079218_11234222	Not Available	779	Open in IMG/M
3300007004\|Ga0079218_12577703	Not Available	603	Open in IMG/M
3300009094\|Ga0111539_12914333	Not Available	553	Open in IMG/M
3300009177\|Ga0105248_10100533	All Organisms → cellular organisms → Bacteria	3259	Open in IMG/M
3300011119\|Ga0105246_10737764	Not Available	867	Open in IMG/M
3300011442\|Ga0137437_1235711	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012212\|Ga0150985_121014283	Not Available	694	Open in IMG/M
3300012893\|Ga0157284_10025575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1188	Open in IMG/M
3300012895\|Ga0157309_10369220	Not Available	504	Open in IMG/M
3300012900\|Ga0157292_10036513	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300012905\|Ga0157296_10013808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1453	Open in IMG/M
3300012914\|Ga0157297_10035409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1223	Open in IMG/M
3300013308\|Ga0157375_10663904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300014325\|Ga0163163_13097633	Not Available	518	Open in IMG/M
3300014326\|Ga0157380_10387899	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300014326\|Ga0157380_10531616	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300014745\|Ga0157377_10310860	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1044	Open in IMG/M
3300014745\|Ga0157377_11582956	Not Available	524	Open in IMG/M
3300014876\|Ga0180064_1003618	All Organisms → cellular organisms → Bacteria → Acidobacteria	3204	Open in IMG/M
3300014878\|Ga0180065_1121984	Not Available	599	Open in IMG/M
3300015371\|Ga0132258_10332234	All Organisms → cellular organisms → Bacteria → Acidobacteria	3752	Open in IMG/M
3300015374\|Ga0132255_100937953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Kytococcaceae → Kytococcus → Kytococcus sedentarius	1296	Open in IMG/M
3300017792\|Ga0163161_10372161	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300018083\|Ga0184628_10001447	All Organisms → cellular organisms → Bacteria	11709	Open in IMG/M
3300018476\|Ga0190274_10842915	Not Available	978	Open in IMG/M
3300018476\|Ga0190274_11774404	Not Available	712	Open in IMG/M
3300018476\|Ga0190274_12514688	Not Available	612	Open in IMG/M
3300018476\|Ga0190274_12643307	Not Available	599	Open in IMG/M
3300018481\|Ga0190271_10002315	All Organisms → cellular organisms → Bacteria	11462	Open in IMG/M
3300019362\|Ga0173479_10052661	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300021082\|Ga0210380_10126773	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300022886\|Ga0247746_1116436	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	663	Open in IMG/M
3300022915\|Ga0247790_10026193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28	1272	Open in IMG/M
3300023066\|Ga0247793_1035655	Not Available	763	Open in IMG/M
3300025901\|Ga0207688_10280926	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300025908\|Ga0207643_10136642	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1462	Open in IMG/M
3300025923\|Ga0207681_10942932	Not Available	723	Open in IMG/M
3300025926\|Ga0207659_10007400	All Organisms → cellular organisms → Bacteria	6749	Open in IMG/M
3300025926\|Ga0207659_10638647	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300025930\|Ga0207701_10240365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1583	Open in IMG/M
3300025930\|Ga0207701_10365756	Not Available	1246	Open in IMG/M
3300025931\|Ga0207644_11015334	Not Available	696	Open in IMG/M
3300025937\|Ga0207669_10011982	All Organisms → cellular organisms → Bacteria	4245	Open in IMG/M
3300025937\|Ga0207669_10271355	Not Available	1274	Open in IMG/M
3300025938\|Ga0207704_11127556	Not Available	667	Open in IMG/M
3300025940\|Ga0207691_10221250	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300025940\|Ga0207691_10850277	Not Available	765	Open in IMG/M
3300025941\|Ga0207711_11152483	Not Available	716	Open in IMG/M
3300025960\|Ga0207651_10696015	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300025960\|Ga0207651_11380228	Not Available	634	Open in IMG/M
3300026067\|Ga0207678_10100492	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300026121\|Ga0207683_11659778	Not Available	588	Open in IMG/M
3300027886\|Ga0209486_10485097	Not Available	765	Open in IMG/M
3300028379\|Ga0268266_10450755	Not Available	1223	Open in IMG/M
3300028380\|Ga0268265_10665631	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300028381\|Ga0268264_12323765	Not Available	543	Open in IMG/M
3300028809\|Ga0247824_11115117	Not Available	505	Open in IMG/M
3300031538\|Ga0310888_10412039	Not Available	795	Open in IMG/M
3300031547\|Ga0310887_10928328	Not Available	552	Open in IMG/M
3300031847\|Ga0310907_10366867	Not Available	742	Open in IMG/M
3300031908\|Ga0310900_10029314	All Organisms → cellular organisms → Bacteria	3026	Open in IMG/M
3300031908\|Ga0310900_10405396	Not Available	1036	Open in IMG/M
3300031940\|Ga0310901_10550592	Not Available	523	Open in IMG/M
3300031944\|Ga0310884_10064580	All Organisms → cellular organisms → Bacteria → Acidobacteria	1690	Open in IMG/M
3300032004\|Ga0307414_10910192	Not Available	807	Open in IMG/M
3300032012\|Ga0310902_10753070	Not Available	660	Open in IMG/M
3300032017\|Ga0310899_10578037	Not Available	560	Open in IMG/M
3300032122\|Ga0310895_10128616	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300032144\|Ga0315910_11298409	Not Available	568	Open in IMG/M
3300032157\|Ga0315912_10592600	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	883	Open in IMG/M
3300032205\|Ga0307472_101108641	Not Available	750	Open in IMG/M
3300034113\|Ga0364937_089672	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.13%
Environmental	Environmental	45.87%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.13%
Terrestrial	Environmental → Terrestrial	41.28%
Aquatic	Environmental → Aquatic	4.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.51%
Sediment	Environmental → Aquatic → Sediment	3.67%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Floodplain	Environmental → Terrestrial → Floodplain	0.92%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	27.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.17%
Loam	Environmental → Terrestrial → Soil → Loam	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	27.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	11.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.09%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.67%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.92%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1026585752	3300000956	Soil	VTAQEALDEIHGLAARRREAYRALDVLERQLQDGGGLPPAFRGFADRPQEQARRARHAELAREIQDLRVQMERLRVNVPLDRIAEIERYWDVDHTTSHSQLRDMGRIPPRD*
JGI10216J12902_1209503351	3300000956	Soil	MTAQEAIDEIHSVAARRIEAYRTLDVLEKELLSGGGLPEAFRGFADRPQERGRRDRYAELAQEIRALRAHLDRLRQSAPFERVAEIDRHWDIEHTTSHSLLREMDRTPP*
Ga0062590_1000893092	3300004157	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRIHLDKLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP*
Ga0062590_1016604841	3300004157	Soil	EIHRVAARRMDAYRTLDVLERELMEGGGLPPAFRGFADRPQEIARRARHAELAQEIQACRADMDRLRQRVPIELRSEIDHYWDIEHTTSHSQLREMGRTPP*
Ga0063356_1017126522	3300004463	Arabidopsis Thaliana Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRADMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPPSR*
Ga0062591_1008955412	3300004643	Soil	MTAQEAIDEIHTVAARRMEAYRILDVLERELLSGGGLPEAFRGFADRPQEIARRDRHAELVREIHAFRAQLDTLRQNVPFERIAEIDRYWDIDHTTSHSLLREMGKTPP*
Ga0070690_1010595592	3300005330	Switchgrass Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP*
Ga0070670_1000253862	3300005331	Switchgrass Rhizosphere	MEAYRTLDVLERELLSGGGLPPAFRGFADRPQELARRDRHAELAQEIQALRAHLDTLRQSVPFERVAEIDQYWDIEHTTSHSILREMGRTPPEPRA*
Ga0070670_1000481925	3300005331	Switchgrass Rhizosphere	MTPREAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP*
Ga0070677_100257332	3300005333	Miscanthus Rhizosphere	MTAQEAIDEIHRVAARRMETYRTLDVLERKLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPP*
Ga0070666_100685484	3300005335	Switchgrass Rhizosphere	QEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP*
Ga0070689_1000638901	3300005340	Switchgrass Rhizosphere	RMETYRTLDVLERKLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPP*
Ga0070689_1021207201	3300005340	Switchgrass Rhizosphere	MLCDWFGCNRRTSLLSTLAQNRYQGTMTAQEAIDEIHTLAARRLEAYRTLDVLERELTDGGGLPSAFRGFAHRPQELARRDRYAELAQEIQALRARLNQLRENVPFERIAEIDHYWDIEHTTSHSLLREM
Ga0070661_1000758441	3300005344	Corn Rhizosphere	IEAYRTLDVLERELMDGGGLPAAFRGFAHRPQELARRDRHAELAQEIQALRTRLNQLRENVPFERIAEIDHYWDIEHTTSHWLLREMGKMPPSLGGSLPNAI*
Ga0070669_1001391602	3300005353	Switchgrass Rhizosphere	MTAQEAIDEIHRVAARRMEAYRTLDVLERELLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPP*
Ga0070669_1007809951	3300005353	Switchgrass Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRADMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPP*
Ga0070675_1000341315	3300005354	Miscanthus Rhizosphere	MTAQEAIDEIHSLAAHRLEAYRTLDLLERGLMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP*
Ga0070675_1003003561	3300005354	Miscanthus Rhizosphere	MTAQEAVDEIHRVAARRIEAYRTLDVLERELLNGGGLPAAFRGFADRPQELARRDRHAEVAQDIQALRAHLDKLRQSVPFERVAEIDHYWDIEH
Ga0070674_1000060457	3300005356	Miscanthus Rhizosphere	MTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP*
Ga0070674_1003847713	3300005356	Miscanthus Rhizosphere	MTAQEAIDEIHGVAARRMEAYRTLDVLERELLDGGGLPAPFRGFADRPQELARRDRHGELAQEIQALRVRLDTLRQSVPFERVAEIDHYWDIEHTTSHSLLREMGMTPP*
Ga0070674_1011364521	3300005356	Miscanthus Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRAEMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPP*
Ga0070673_1008177381	3300005364	Switchgrass Rhizosphere	LRLVAGSAQNRSKGTMTAQEAIDEIHALAARRLEAYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIKALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRDMSRTPP*
Ga0070688_1006169842	3300005365	Switchgrass Rhizosphere	METYRTLDVLERKLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTP
Ga0070659_1015018951	3300005366	Corn Rhizosphere	MTPREAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLRELGRTPP*
Ga0070663_1000477493	3300005455	Corn Rhizosphere	MRDGSAEMSQNRCEMTPQEAIDEIHRVAGRRMELYRTLDRLETELKDGGGLPEAFRGFSDRPQEIARRSRHAELAQEIQALRARLDELRHSVPFERIAEIDHYWNIEHTTSHSLLRDMGTTPP*
Ga0070678_1020450222	3300005456	Miscanthus Rhizosphere	SGTWNRSSLYLDDGADMTAEEAIAEIHSVAARRIEAYRTLDVLERELMDGGGLPAAFRGFADRPQELARRDRHRELALEIQTLRALLEKLRQSVPFERVAEIDHYWDVEHTTSHSLLREMGRTPP*
Ga0070662_1011093243	3300005457	Corn Rhizosphere	MTPREAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELGQEIQALRTDMDRLRQQVPVESRSEIDHYWDV
Ga0070672_1002677632	3300005543	Miscanthus Rhizosphere	MTAQEAIDEIHALAARRLEAYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRDMSRTPP*
Ga0070686_1011383681	3300005544	Switchgrass Rhizosphere	TMTAQEAIDEIHTVAARRMEAYRILDVLERELLRGGGLPEAFRGFADRPQEIARRDRHAELVREIHAFRAQLDTLRQNVPFERIAEIDRYWDIDHTTSHSLLREMGKTPP*
Ga0070665_1013163002	3300005548	Switchgrass Rhizosphere	MTPREAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELGQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP*
Ga0068854_1009408341	3300005578	Corn Rhizosphere	RHAPMTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRADMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPP*
Ga0068864_1005380482	3300005618	Switchgrass Rhizosphere	MTAQEAVDEIHRVAARRMEAYRTLDVLERELLSGGGLPPAFRGFADRPQELARRDRHAELVQEIQALRAHLDTLRQSVPFERVAEIDQYWDIEHTTSHSILREMGRTPPEPRA*
Ga0068870_107975891	3300005840	Miscanthus Rhizosphere	MTAQEAVDEIHRVAARRMEAYRTLDVLERELLSGGGLPPAFRGFADRPQELARRDRHAELVQEIQALRAHLDTLRQSVPFERVAEIDQYW
Ga0068870_109573601	3300005840	Miscanthus Rhizosphere	MTAQEAIDEIHRVAARRMETYRTLDVLERNLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPP*
Ga0068862_1012986561	3300005844	Switchgrass Rhizosphere	MTAQEAIDEIHRVAARRMEAYRTLDVLERELLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMG
Ga0068865_1018690141	3300006881	Miscanthus Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRAEMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPPSR*
Ga0079216_113477062	3300006918	Agricultural Soil	MTAQDAIDQIHRIATQRMELYRTLDVLERGLLDGGGLPAAFRGFADRPQEMARRDRHAELAQEIQALRVQMDRLRQGVPIDRQSEIDHYWDIEHTTSHSQLREMGRTPP*
Ga0079218_112342221	3300007004	Agricultural Soil	AIDHIHSVAAQRRDLYRTLDVLERELLDGGGLPPAFRGFANRPQDIARRDRHAELAQEIQALRARMDKLRQSVPIDRLSEIDHYWDIEHTTSHSLLREMGRTPP*
Ga0079218_125777032	3300007004	Agricultural Soil	LHLVADSRRIAHQVTMTAQEAIDEIHSVAARRMEAYRTLDILERELLERGGLPEAFRGFADRPQELARRERHAELAREILALRAHLDTLRQSVPFDLIEQIDRYWDIEHTTSHSLLREMGRTPP*
Ga0111539_129143331	3300009094	Populus Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFADRPQEIARRARHAELAQEIQTLRAEMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPP*
Ga0105248_101005332	3300009177	Switchgrass Rhizosphere	LRLVAGSAQNRSKGTMTAQEAIDEIHALAARRLEAYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRDMSRTPP*
Ga0105246_107377641	3300011119	Miscanthus Rhizosphere	MTAQEAVDEIHRVAARRMEAYRTLDVLERELLSGGGLPPAFRGFADRPQELARRDRHAELAQEIQALRAHLDTLRQSVPFERVAEIDQYWDIE
Ga0137437_12357112	3300011442	Soil	LAARRLEAYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRDMSRTPP*
Ga0150985_1210142831	3300012212	Avena Fatua Rhizosphere	MTPQEAIDEIHRVAAQRLEAYRILDVLERELLDGGLPPAFRGFADRPQEIARRARHAELAQEIQALRADIDQLRQSVPVESRAQIDHYWDIEYTTSYSQLREMGRMPPAEEPRLPARED*
Ga0157284_100255752	3300012893	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRIHLDTLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP*
Ga0157309_103692202	3300012895	Soil	RRRLGFVAVAPGRRLGSESCTKGTMTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRTQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP*
Ga0157292_100365133	3300012900	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPLAFRGFADRPQELARRDRHRELAQEIQALRIHLDKLRQSVPFERVAEIDHYW
Ga0157296_100138082	3300012905	Soil	DSPYSQEGVGMTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRIHLDKLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP*
Ga0157297_100354092	3300012914	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELALEIQTLRALLETLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP*
Ga0157375_106639042	3300013308	Miscanthus Rhizosphere	MTAQEAIDEIHRVAARRMETYRTLDVLERKLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPL*
Ga0163163_130976331	3300014325	Switchgrass Rhizosphere	MTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRDMSRTPP*
Ga0157380_103878992	3300014326	Switchgrass Rhizosphere	MTAQEAIDHIHSAAAQRMDLYRTLDVLERELLDGGGLPPAFRGFANRPQDLARSDRHAELAQEIQALRAGMEKLRQSVPLDRLPEIDHYWDIEHTTSHSLLREMGRTPP*
Ga0157380_105316162	3300014326	Switchgrass Rhizosphere	MTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRTQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP*
Ga0157377_103108602	3300014745	Miscanthus Rhizosphere	MTAQEAVDEIHRVAARRMEAYRTLDVLERELLSGGGLPPAFRGFADRPQELARRDRHAELVQEIQALRAHLDTLRQSVPFERVAEIDQYWDIEHTTSHSILREMGRTPPEPRG*
Ga0157377_115829561	3300014745	Miscanthus Rhizosphere	QEAIDEIHRVAARRMEAYRTLDVLERELLSGGDLPTAFRGFAHRPQELARRDRHAVLAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPL*
Ga0180064_10036183	3300014876	Soil	MTAQEAIDEIHSVAARRIEAYRTLDVLERELLSGGGLPEAFRGFADRPQELARRDRHAELAQDIQALRADLDKLRQSVPFERITEIDRYWDIEHTTSHSLLREMGRTPP*
Ga0180065_11219841	3300014878	Soil	IHSVAARRIEAYRTLDVLERELLSGGGLPEAFRGFADRPQELARRDRHAELAQDIQALRADLDKLRQSVPFERITEIDRYWDIEHTTSHSLLREMGRTPP*
Ga0132258_103322346	3300015371	Arabidopsis Rhizosphere	MTPQEAIDEIHRVATRRIEAYRTLDVLERELMDGGGLPAAFRGFTHRPQELARRDRHAELVQEIHALRARLNQLRESVPFERVAEIDRYWDIEHTTS
Ga0132255_1009379533	3300015374	Arabidopsis Rhizosphere	GTMTPQEAIDEIHRVATRRIEAYRTLDVLERELMDGGGLPAAFRGFTHRPQELARRDRHAELVQEIHALRARLNQLRESVPFERVAEIDRYWDIEHTTSYSLLREMGKTPP*
Ga0163161_103721611	3300017792	Switchgrass Rhizosphere	MTAQEAIDEIHALAARRIEAYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAQLALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRDMSRTPP
Ga0184628_100014475	3300018083	Groundwater Sediment	MTAQEAIDEIHALAARRLEAYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRDMSRTPP
Ga0190274_108429152	3300018476	Soil	IDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRIHLDKLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPPP
Ga0190274_117744041	3300018476	Soil	MTAQEAIDEIHRVAALRMEAYRTLDVLERELLNGGGLPAAFRGFADRPQELARRDRHAELAQEILAHRVHLDTLRQAVPFERIAEIDHYWDIEHTTSHSLLREMGKTPP
Ga0190274_125146881	3300018476	Soil	MTPQEAIDEIHSVAARRIEAYRTLDVLERELLDGGGLQPAFRGFADRPQELARRDRHRELAQEIQALRAQLDTLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP
Ga0190274_126433072	3300018476	Soil	MTAQEAIDEIHRVAARRMEAYRTLDVLERELLDGGGLPEAFRGFADRPQELARRDRHGELAQEIQALRTHLDRLRQSVPFERVAEIDHYWDIEHTTSHSLLREMDR
Ga0190271_1000231510	3300018481	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELSDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRTHLDKLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPPP
Ga0173479_100526612	3300019362	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRIHLDKLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP
Ga0210380_101267732	3300021082	Groundwater Sediment	MTAQEAIDEIHSLAAHRLEAYRTLDLLERGLMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP
Ga0247746_11164362	3300022886	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPLAFRGFADRPQELARRDRHRELAQEIQALRIHLDKLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP
Ga0247790_100261932	3300022915	Soil	GPGMTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRDRHRELAQEIQALRIHLDKLRQSVPFERVAEIHHYRYIEHTTSHSLLRDMGRTPP
Ga0247793_10356552	3300023066	Soil	MTAQEAIDEIHSVAARRIEAYHTLDVLERELMDGGGLPPAFRGFADRPQELARRNRHRELAQEIQALRIHLDTLRQSVPFERVAEIDHYWDIEHTTSHSLLRDMGRTPP
Ga0207688_102809262	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTAQEAIDEIHRVAARRMEAYRTLDVLERELLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPL
Ga0207643_101366423	3300025908	Miscanthus Rhizosphere	MTAQEAVDEIHRVAARRMEAYRTLDVLERELLSGGGLPPAFRGFADRPQELARRDRHAELVQEIQALRAHLDTLRQSVPFERVAEIDQYWDIEHTTSHSILREMGRTPPEPRG
Ga0207681_109429321	3300025923	Switchgrass Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRADMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPP
Ga0207659_100074001	3300025926	Miscanthus Rhizosphere	YRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRTQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP
Ga0207659_106386472	3300025926	Miscanthus Rhizosphere	MTAQEAIDEIHRVAARRMETYRTLDVLERKLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPL
Ga0207701_102403652	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTAQEAIDEIHRVAARRMETYRTLDVLERKLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDRYWDIDHTTSHSLLREMGRTPP
Ga0207701_103657561	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP
Ga0207644_110153342	3300025931	Switchgrass Rhizosphere	MTPREAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP
Ga0207669_100119824	3300025937	Miscanthus Rhizosphere	MTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP
Ga0207669_102713553	3300025937	Miscanthus Rhizosphere	MTAQEAIDEIHGVAARRMEAYRTLDVLERELLDGGGLPAPFRGFADRPQELARRDRHGELAQEIQALRVRLDTLRQSVPFERVAEIDHYWDIEHTTSHSLLREMGMTPP
Ga0207704_111275562	3300025938	Miscanthus Rhizosphere	MTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRY
Ga0207691_102212502	3300025940	Miscanthus Rhizosphere	MTAQEAIDEIHRVAARRMETYRTLDVLERKLLSGGDLPTAFRGFAHRPQELARRDRHAELAQEIQALRAHLDKLRQIVPFERVAEIDHYWDIDHTTSHSLLREMGRTPP
Ga0207691_108502772	3300025940	Miscanthus Rhizosphere	IDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP
Ga0207711_111524831	3300025941	Switchgrass Rhizosphere	REAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP
Ga0207651_106960152	3300025960	Switchgrass Rhizosphere	MTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRTQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLRE
Ga0207651_113802282	3300025960	Switchgrass Rhizosphere	MSRTPGASSGTWNRSSLYLDDGADMTAEEAIAEIHSVAARRIEAYRTLDVLERELMDGGGLPAAFRGFADRPQELARRDRHRELALEIQTLRALLEKLRQSVPFERVAEIDHYWDVEHTTSHSLLREMGRTPP
Ga0207678_101004923	3300026067	Corn Rhizosphere	MRDGSAEMSQNRCEMTAQEAIDEIHRVAGRRMELYRTLDRLETELKDGGGLPEAFRGFSDRPQEIARRSRHAELAQEIQALRARLDELRHSVPFERIAEIDHYWNIEHTTSHSLLRDMGTTPP
Ga0207683_116597781	3300026121	Miscanthus Rhizosphere	RTPGASSGTWNRSSLYLDDGADMTAEEAIAEIHSVAARRIEAYRTLDVLERELMDGGGLPAAFRGFADRPQELARRDRHRELALEIQTLRALLEKLRQSVPFERVAEIDHYWDVEHTTSHSLLREMGRTPP
Ga0209486_104850972	3300027886	Agricultural Soil	RRDLYRTLDVLERELLDGGGLPPAFRGFANRPQDIARRDRHAELAQEIQALRARMDKLRQSVPIDRLSEIDHYWDIEHTTSHSLLREMGRTPP
Ga0268266_104507552	3300028379	Switchgrass Rhizosphere	MTPREAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELGQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSHSQLREMGRTPP
Ga0268265_106656311	3300028380	Switchgrass Rhizosphere	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRADMDRLRQRVPVESRSEIDHYWDIEH
Ga0268264_123237652	3300028381	Switchgrass Rhizosphere	MTPREAIDEIHRVAARRLEAYRTLDLLERQLTEGGGLPPAFRGFADRPQEIARRARHAELAQEIQALRTDMDRLRQQVPVESRSEIDHYWDVEHTTSH
Ga0247824_111151171	3300028809	Soil	YGGRAGRRRLGFVAVAPGRRLGSESCTKGTMTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP
Ga0310888_104120391	3300031538	Soil	AQEAIDEIHSVASQRMDLYRTLDVLERELLDGNGLPPAFRGFANRPQEMARRDRHAELAQEIQALRAHLDKLRQSVPFERVAEIDHYWDLEHTTSHSLLREMGRTPP
Ga0310887_109283281	3300031547	Soil	MLCDWFGCNRRTSLLSTLAQNRYQGTMTTQEAIDEIHTLAARRLEAYRTLDVLERELTDGGGLPSAFRGFAHRPQELARRDRYAELAQEIQALRARLNQLRENVPFERIAEIDHYWDIEHTTSHSLLREMGKTPPSLSGSRPNAT
Ga0310907_103668672	3300031847	Soil	AIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRADMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPPSR
Ga0310900_100293142	3300031908	Soil	MTAQEAIDEIHSLAAHRLEGYRTLDLLERELMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRTQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP
Ga0310900_104053961	3300031908	Soil	MTPQEAIGEIHRVAARRLEAYRTLDVLERELMEGGGLPPAFRGFAERPQEIARRARHAELAQEIQTLRADMDRLRQRVPVESRSEIDHYWDIEHTTSHSQLREMGRTPPSR
Ga0310901_105505921	3300031940	Soil	MTAQEAIDEIHSLAAHRLEAYRTLDLLERGLMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRVQMDTLRQSVPFERVAEIDRYWDIEHTT
Ga0310884_100645801	3300031944	Soil	MLCDWFGCNRRTSLLSTLAQNRYQGTMTAQEAIDEIHTLAARRLEAYRTLDVLERELTDGGGLPSAFRGFAHRPQELARRDRYAELAQEIQALRARLNQLRENVPFERIAEIDHYWDIEHTTSHSLLREMGKTPPSLSGSRPNAT
Ga0307414_109101921	3300032004	Rhizosphere	RTLDELERQLQDGGGLPPAFRGFGDRPQEMARRERHAELAREIQDLRVQMERLRVNVPLDRIAEVEHYWDVDHTTSHSELREMGRTPPQD
Ga0310902_107530701	3300032012	Soil	MTAQEAIDEIHSVATRRLEAYRTLDVLERELMDGGGLPAAFRGFAHRPQELARRDRHAELAQEIQDLRARLNQLRENVPFERIAEIDHYWDIEHTTSHSLLREMGKTPPSLSGSRPNAT
Ga0310899_105780371	3300032017	Soil	MTAQEAIDEIHSLAAHRLEAYRTLDLLERGLMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRTQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP
Ga0310895_101286162	3300032122	Soil	MTAQEAIDEIHSLAAHRREAYRTLDLLERGLMDGGGLPAAFRGFADRPQELARRARHAELALEIQALRTQMDTLRQSVPFERVAEIDRYWDIEHTTSHSLLREMGRTPP
Ga0315910_112984091	3300032144	Soil	MTPQEAIDEIHRIARDRAQAYRTLDVLERELMDGGGLPEALRGFADRPQEMARRARHAEIAQEIQRLREAMDRVRASVPREGLSEVDHYWDIEHTTSHSLLREMGRTPP
Ga0315912_105926001	3300032157	Soil	MTAEEAIDEIHRVAARRMEAYRTLDVLERALVDGGGLPEAFRGFADRPQELARRDRHAELAQEIQVLRARLDTLRQSVPFDRIGEIDHYWDIEHTSSHSLLRDVGRTPP
Ga0307472_1011086411	3300032205	Hardwood Forest Soil	MTAQEAIDEIHAVAARRIEAYRTLDVLERELLSGGGLPEAFRGFADRPQEMARRNRHAELALEIQAFRAQLDTLRRSVPFERIAEIDHYWDIEHTTSHSLLREMGKAPPFHHRPHQSSE
Ga0364937_089672_3_284	3300034113	Sediment	MEAYRTLDVLETGLLNGGGLPAAFRGFADRPQELARRDRHAELAQEIQALRAHLDKLRQSVPFERVAEIDHYWDIEHTTSHSLLREMGKTPPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088396

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences