Metagenome / Metatranscriptome Family F088389

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088389
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	72 residues
Representative Sequence	MNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEP
Number of Associated Samples	88
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.56 %
% of genes near scaffold ends (potentially truncated)	91.74 %
% of genes from short scaffolds (< 2000 bps)	88.07 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.064 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (17.431 % of family members)
Environment Ontology (ENVO)	Unclassified (26.606 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.624 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.81% β-sheet: 11.88% Coil/Unstructured: 69.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF02781	G6PD_C	24.77
PF13561	adh_short_C2	10.09
PF10091	Glycoamylase	7.34
PF12680	SnoaL_2	6.42
PF03807	F420_oxidored	6.42
PF09137	Glucodextran_N	2.75
PF00561	Abhydrolase_1	1.83
PF04041	Glyco_hydro_130	0.92
PF07107	WI12	0.92
PF07992	Pyr_redox_2	0.92
PF00873	ACR_tran	0.92
PF07366	SnoaL	0.92
PF00440	TetR_N	0.92
PF03061	4HBT	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	24.77
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	2.75
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.06 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.06 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.06 %
Unclassified	root	N/A	22.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.51 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.67 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.75 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.75 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.92 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.75 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.75 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.92 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.75 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Capsulimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales	0.92 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.92 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.75 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	0.92 %
Capsulimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Novosphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium	0.92 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.92 %
Silvimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.75 %
Granulicella cerasi	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	1.83 %
unclassified Novosphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium	0.92 %
Capsulimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas	0.92 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.92 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.92 %
Cyanobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	0.92 %
Silvimonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.75 %
Granulicella cerasi	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	1.83 %
unclassified Cyanobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium	0.92 %
Novosphingobium sp. AP12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. AP12	0.92 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.92 %
Mucilaginibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	0.92 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.92 %
Silvimonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.75 %
Granulicella cerasi	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	1.83 %
unclassified Mucilaginibacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → unclassified Mucilaginibacter	0.92 %
Cyanobium sp. LEGE 06143	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. LEGE 06143	0.92 %
Novosphingobium sp. AP12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. AP12	0.92 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.92 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.92 %
Silvimonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.75 %
Granulicella cerasi	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	1.83 %
Mucilaginibacter sp. BJC16-A38	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → unclassified Mucilaginibacter → Mucilaginibacter sp. BJC16-A38	0.92 %
Cyanobium sp. LEGE 06143	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. LEGE 06143	0.92 %
Novosphingobium sp. AP12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. AP12	0.92 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.92 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.92 %
Silvimonas terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	0.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001083\|JGI12678J13193_1002684	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300001471\|JGI12712J15308_10127528	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300001593\|JGI12635J15846_10650493	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300004631\|Ga0058899_11960856	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005184\|Ga0066671_11018403	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300005440\|Ga0070705_101098048	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005459\|Ga0068867_100739120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	872	Open in IMG/M
3300005712\|Ga0070764_10940000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	543	Open in IMG/M
3300005993\|Ga0080027_10035332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1790	Open in IMG/M
3300005994\|Ga0066789_10071710	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300005994\|Ga0066789_10073095	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300005995\|Ga0066790_10017187	All Organisms → cellular organisms → Bacteria	3178	Open in IMG/M
3300005995\|Ga0066790_10495156	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006893\|Ga0073928_10367195	All Organisms → cellular organisms → Bacteria → Proteobacteria	1061	Open in IMG/M
3300009089\|Ga0099828_10381715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1270	Open in IMG/M
3300010859\|Ga0126352_1242757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300010865\|Ga0126346_1018408	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300011270\|Ga0137391_10659949	Not Available	872	Open in IMG/M
3300012917\|Ga0137395_10492125	Not Available	883	Open in IMG/M
3300012929\|Ga0137404_11443815	Not Available	636	Open in IMG/M
3300014052\|Ga0120109_1062522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300014160\|Ga0181517_10161996	Not Available	1248	Open in IMG/M
3300014168\|Ga0181534_10016043	All Organisms → cellular organisms → Bacteria	3836	Open in IMG/M
3300014200\|Ga0181526_10801795	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300014489\|Ga0182018_10215027	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300014491\|Ga0182014_10434396	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300014495\|Ga0182015_10365510	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300014501\|Ga0182024_10288547	Not Available	2176	Open in IMG/M
3300014501\|Ga0182024_10870042	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300014501\|Ga0182024_12166373	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300014654\|Ga0181525_10424410	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300014657\|Ga0181522_10008037	All Organisms → cellular organisms → Bacteria	5668	Open in IMG/M
3300014657\|Ga0181522_10979236	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300017946\|Ga0187879_10350656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300017946\|Ga0187879_10558687	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300017946\|Ga0187879_10734578	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300018022\|Ga0187864_10113455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1389	Open in IMG/M
3300018034\|Ga0187863_10149998	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300018034\|Ga0187863_10396882	Not Available	769	Open in IMG/M
3300018042\|Ga0187871_10048166	All Organisms → cellular organisms → Bacteria	2576	Open in IMG/M
3300018043\|Ga0187887_10509240	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300018043\|Ga0187887_10676951	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300019881\|Ga0193707_1039075	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300019886\|Ga0193727_1136706	Not Available	683	Open in IMG/M
3300019887\|Ga0193729_1082857	Not Available	1248	Open in IMG/M
3300019887\|Ga0193729_1205873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300019888\|Ga0193751_1149448	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300019888\|Ga0193751_1190665	Not Available	696	Open in IMG/M
3300019890\|Ga0193728_1278253	Not Available	651	Open in IMG/M
3300021404\|Ga0210389_10871392	Not Available	702	Open in IMG/M
3300022557\|Ga0212123_10279787	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300023101\|Ga0224557_1263653	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300025320\|Ga0209171_10171193	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300025612\|Ga0208691_1137051	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300025625\|Ga0208219_1047073	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300027537\|Ga0209419_1019987	Not Available	1218	Open in IMG/M
3300027562\|Ga0209735_1025657	Not Available	1222	Open in IMG/M
3300027587\|Ga0209220_1039453	Not Available	1264	Open in IMG/M
3300027591\|Ga0209733_1105605	Not Available	707	Open in IMG/M
3300027610\|Ga0209528_1063832	Not Available	815	Open in IMG/M
3300027645\|Ga0209117_1005419	All Organisms → cellular organisms → Bacteria	4377	Open in IMG/M
3300027645\|Ga0209117_1137592	Not Available	644	Open in IMG/M
3300027645\|Ga0209117_1182710	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300027660\|Ga0209736_1004408	Not Available	4653	Open in IMG/M
3300027667\|Ga0209009_1003202	All Organisms → cellular organisms → Bacteria → Proteobacteria	4054	Open in IMG/M
3300027674\|Ga0209118_1006665	All Organisms → cellular organisms → Bacteria	4229	Open in IMG/M
3300027895\|Ga0209624_10950369	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300028036\|Ga0265355_1002101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1365	Open in IMG/M
3300028047\|Ga0209526_10024972	All Organisms → cellular organisms → Bacteria	4189	Open in IMG/M
3300028047\|Ga0209526_10356739	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300028047\|Ga0209526_10998840	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300028552\|Ga0302149_1152098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	602	Open in IMG/M
3300028572\|Ga0302152_10296431	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028574\|Ga0302153_10155663	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300028745\|Ga0302267_10160560	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300028762\|Ga0302202_10038430	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300028783\|Ga0302279_10283895	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300028866\|Ga0302278_10127226	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300029882\|Ga0311368_10250176	Not Available	1370	Open in IMG/M
3300029883\|Ga0311327_10421639	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300029907\|Ga0311329_10154384	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300029908\|Ga0311341_10189058	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300029908\|Ga0311341_10346925	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella cerasi	870	Open in IMG/M
3300029922\|Ga0311363_10324543	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300029939\|Ga0311328_11118323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Novosphingobium → unclassified Novosphingobium → Novosphingobium sp. AP12	507	Open in IMG/M
3300029955\|Ga0311342_10365282	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300029955\|Ga0311342_11314114	Not Available	513	Open in IMG/M
3300029957\|Ga0265324_10191960	Not Available	694	Open in IMG/M
3300029993\|Ga0302304_10185100	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300030007\|Ga0311338_10176264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	2501	Open in IMG/M
3300030011\|Ga0302270_10277515	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300030020\|Ga0311344_10445091	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300030503\|Ga0311370_11803073	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300030518\|Ga0302275_10082891	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300030520\|Ga0311372_10906846	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300030520\|Ga0311372_13065361	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300030991\|Ga0073994_10021815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	983	Open in IMG/M
3300030991\|Ga0073994_10057761	Not Available	620	Open in IMG/M
3300031231\|Ga0170824_114954905	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → unclassified Mucilaginibacter → Mucilaginibacter sp. BJC16-A38	542	Open in IMG/M
3300031234\|Ga0302325_11947803	Not Available	728	Open in IMG/M
3300031258\|Ga0302318_10691467	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031469\|Ga0170819_11840635	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300031524\|Ga0302320_10657392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. LEGE 06143	1204	Open in IMG/M
3300031525\|Ga0302326_12385056	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031525\|Ga0302326_13535832	Not Available	518	Open in IMG/M
3300031525\|Ga0302326_13573175	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031708\|Ga0310686_119792975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	1370	Open in IMG/M
3300031837\|Ga0302315_10766892	Not Available	502	Open in IMG/M
3300034124\|Ga0370483_0041772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Silvimonas → Silvimonas terrae	1426	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.82%
Aquatic	Environmental → Aquatic	17.43%
Plants	Host-Associated → Plants	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.46%
Peat	Environmental → Terrestrial → Peat	29.36%
Freshwater	Environmental → Aquatic → Freshwater	14.68%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	29.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.18%
Loam	Environmental → Terrestrial → Soil → Loam	19.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.01%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	29.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.59%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.75%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	17.43%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	17.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.67%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.75%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.92%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.92%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001083	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029957	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG	Host-Associated	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12678J13193_10026842	3300001083	Forest Soil	MADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCIMDVSTDE
JGI12712J15308_101275282	3300001471	Forest Soil	MADTVAFPVLSAAELEECPEFGTRCSFAAGEEIFGAGSQTFDCYVIVSGDVCIMDVSTDEPTCIV
JGI12635J15846_106504932	3300001593	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDV
Ga0058899_119608562	3300004631	Forest Soil	MMNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAPDEEIFGAGSQSFDCFVL
Ga0066671_110184032	3300005184	Soil	MADTVAFPVFSAAELAECTEFGTRCSFARGEELFRAGSQSFDCYVIASGQVCIMDVSTDE
Ga0070705_1010980482	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MNQTPDQLHADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDE
Ga0068867_1007391201	3300005459	Miscanthus Rhizosphere	MSQTAGELQADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVS
Ga0070764_109400002	3300005712	Soil	MKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILSGEVCIIDVLTDEPTYLVR
Ga0080027_100353321	3300005993	Prmafrost Soil	MNQTPVQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAQGEEIFGAGSQSFDCYVIVLGDVCIMDVSTDEPTCIV
Ga0066789_100717103	3300005994	Soil	MNQTPVQLQADLMADTVAFPVLSAAELAVCTEFGTRCSFAPGEEIFGAGSQSFDCYVIVLGDVCIMDV
Ga0066789_100730951	3300005994	Soil	MADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVLGDVCIMDV
Ga0066790_100171871	3300005995	Soil	MNQTPVQLQADLMADTVAFPVLSAAELAVCTEFGTRCSFAPGEEIFGAGSQSFDCYVIVLGDVCIMDVSTDEPTCIVRLG
Ga0066790_104951562	3300005995	Soil	MADTVAFPVLSAAELAECTEFGTRCSFAQGEEIFGAGSQSFDCYVIVLGDVCIMDVSTDEPTCIVRLG
Ga0073928_103671951	3300006893	Iron-Sulfur Acid Spring	MADTVAFPILSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVR
Ga0099828_103817151	3300009089	Vadose Zone Soil	MNQTPDQLRADLMADTVAFPVLSAAELAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVRYGA
Ga0126352_12427572	3300010859	Boreal Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSADEPT
Ga0126346_10184082	3300010865	Boreal Forest Soil	MNQTRDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVRYGAGQKEL*
Ga0137391_106599492	3300011270	Vadose Zone Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVS
Ga0137395_104921251	3300012917	Vadose Zone Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGRQPFDCYVIVSGDVCIMDVSTDEPTCIVRYGA
Ga0137404_114438152	3300012929	Vadose Zone Soil	MNETPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFAPGAEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVRYGAG
Ga0120109_10625221	3300014052	Permafrost	MNQTPDQFQADLMADTLAFPVLSAAELAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCLVRY
Ga0181517_101619961	3300014160	Bog	VQLEQLPYQVNKQKMIQTPDQLHTDQMKDKVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILSGE
Ga0181534_100160431	3300014168	Bog	MNQTPDQIDTDLMKDTVAFPVLSAVELEECAEFGTRCSFAAGEDLFRVGAQPFDCYVILSGEVCIIDV
Ga0181526_108017951	3300014200	Bog	MNQTPDQLHADLMADTVAFPLLSAAELEECAEFGTRCSFGAGEDLFRAGAHPFDCYVILSGEVCIIDVATDEPTYLMRLRGANSRVTLICSLGDA
Ga0182018_102150271	3300014489	Palsa	MSTAIQSSALNQLFNDLMKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILSGE
Ga0182014_104343962	3300014491	Bog	MNQTPDQLHADLMADTVAFPILSAAELEECAEFGTRCSFGAGEDLFRAGSHPFDCYVVLSGEVC
Ga0182015_103655101	3300014495	Palsa	VQLEPLPYQVNKQQMNQTPDQLHADLMKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILSG
Ga0182024_102885472	3300014501	Permafrost	MSQTPDQLHADLMADMVAFPVLSAAELAECTEFGTRCSFVPGEEIFGAGSQSFDCYVIVSGDVA*
Ga0182024_108700422	3300014501	Permafrost	MMNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFRAGSQSFDCFVIVSGDVCIMDVSTDEPTCIVRYGAGQ
Ga0182024_121663731	3300014501	Permafrost	VQLEQLPYQVNKQKMNQTPDQLHTDQMKDTVAFPVLPAAELEECAEFGTRCSFAAGEELFRAGAQPFDCYVILSGEV
Ga0181525_104244101	3300014654	Bog	MNQTPDQLHADLMKDTVAFPVLSAAELEDCAEFGTRCSFAAGEDLFRAGAQPLDCYVILSGEACIIDVSTDEPTYRTRHRG
Ga0181522_100080371	3300014657	Bog	MNQTPDQLHADLMADTVAFPLLSAAELEECAEFGTRCSFGAGEDLFRAGAQPFDCYVILSGEVCIID
Ga0181522_109792361	3300014657	Bog	MNQTPDQIDTDLMKDTVAFPVLSAVELEECAEFGTRCSFAAGEDLFRVGAQPFDCYVILSGEVCIIDVSTDEPTYLI
Ga0187879_103506562	3300017946	Peatland	MMNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFRAGSQSFDCFVI
Ga0187879_105586871	3300017946	Peatland	MTHTPDQLYTDQMKDTVAFPVLAAAELTECVEFGTRCSFAAGDDLFLAGAQPFDCYVILSGEVCIIDV
Ga0187879_107345781	3300017946	Peatland	MNQTPDQPQADPMADPVAFPILSAAELEECAEFGTRCSFGAGEDLFRAGANPFDCYVILSGEVCIIDVLTDEPTYLV
Ga0187864_101134553	3300018022	Peatland	MNQTPDQLPADLMADTVAFPILSAAELEECAEFGTRCSLAAGEDLFRAGAHPFDCYVILSGEVCII
Ga0187863_101499983	3300018034	Peatland	MADTVAFPLLSAAELEECAEFGTRCSFGAGEDLFRAGAHPFDCYVILSGEVCIIDVSTDEPT
Ga0187863_103968821	3300018034	Peatland	MNQTPDQLHADPMADAVAFPVLSAAELQECAEFGTRCSFAAGEDLFRAGDQPLDCYVILS
Ga0187871_100481661	3300018042	Peatland	VQLEPLPYQVNKQQMNQTPDQLHADLMKDTVAFPVLSAAELEECAEFGTRCSFATGEDLFRAGAQPFDCYVIL
Ga0187887_105092402	3300018043	Peatland	MNQTPDQPQADPMADPVAFPILSAAELEECAEFGTRCSFGAGEDLFRAGANPFDCYVILSGEVCIIDVSTDEPT
Ga0187887_106769512	3300018043	Peatland	MKDTVAFPVLSAAELEECAEFGTRCSFAAGEALFRAGAQPFDCYVILSGEVCIIDVSTDEPT
Ga0193707_10390751	3300019881	Soil	MNQTPDQFHADLMADTVAFPVLSAAELVECTEFGTRCSFSAGEEIFGAGSQSFDCYVIVL
Ga0193727_11367062	3300019886	Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDE
Ga0193729_10828571	3300019887	Soil	MNQTPVQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVLGDVCIMDVSTDEPTCIVRLGAG
Ga0193729_12058732	3300019887	Soil	MNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIVDVST
Ga0193751_11494483	3300019888	Soil	MSQTPDQLHADLMADTVAFPVLSAAQLAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVS
Ga0193751_11906652	3300019888	Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVR
Ga0193728_12782531	3300019890	Soil	MNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAAGAEIFGAGSQSFDCYVIVSGDVCIM
Ga0210389_108713921	3300021404	Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCIMDISTDEPTCIVPYGGWAVHR
Ga0212123_102797871	3300022557	Iron-Sulfur Acid Spring	MADTVAFPILSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTC
Ga0224557_12636532	3300023101	Soil	MNQTPDQLHADQMKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQAFDCYVIVSGEVCIIDVSTDEPIYLVRLPGGQF
Ga0209171_101711931	3300025320	Iron-Sulfur Acid Spring	MADTVAFPVLSAAELAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVSMDEPTCI
Ga0208691_11370511	3300025612	Peatland	MNQTPDQLHTDQMKDTVAFPVLSAAELEECAEFGTRCSFAAGEYLFRAGAQPFDCYVIVSGEVCI
Ga0208219_10470733	3300025625	Arctic Peat Soil	PNRKGDPDVRPIQAIQKMNQTPDQLHADLMKDTVAFPVLSAAELEECAEFGTRCSFATGEDLFRAGAQPFDCYIILSGEVCIIDVSTDEPTYLLRLRGGAIHG
Ga0209419_10199872	3300027537	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFTPGEEIFGAGSQSFDCYVIISGDVCIMDVSTDEPTCIVRYGA
Ga0209735_10256572	3300027562	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEP
Ga0209220_10394531	3300027587	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFAPGEEIFGAGSQSFDCYV
Ga0209733_11056052	3300027591	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDV
Ga0209528_10638321	3300027610	Forest Soil	MADTVAFPVLSAAELEQCTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVS
Ga0209117_10054191	3300027645	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCIMDVSTD
Ga0209117_11375922	3300027645	Forest Soil	MADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVRYGAG
Ga0209117_11827101	3300027645	Forest Soil	MADTVAFPVLSAAELAECTEFGTRCLFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVRYGAG
Ga0209736_10044081	3300027660	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIM
Ga0209009_10032021	3300027667	Forest Soil	MADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDICIMDVSTDEPTCIVRYGAGQ
Ga0209118_10066651	3300027674	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCIMDVS
Ga0209624_109503692	3300027895	Forest Soil	VQLEQLPYQVNKQKMNQTPDQLHTDQMKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILS
Ga0265355_10021013	3300028036	Rhizosphere	MADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVLGDVCIIDVSTDEPTCIVHLG
Ga0209526_100249721	3300028047	Forest Soil	MNQTPDQLQADLMADTVAFPVLSAAELEQCTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEP
Ga0209526_103567392	3300028047	Forest Soil	MADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVSGDVCIMDVST
Ga0209526_109988401	3300028047	Forest Soil	MADTVAFPVLSAAELAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVRYGAG
Ga0302149_11520981	3300028552	Bog	MADTVAFPILSTAELEECAEFGTRCSFGAGEDLFRAGARPFDCYVILSGEVCIIDVSTDEPTRLIRLRERQFTG
Ga0302152_102964311	3300028572	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLV
Ga0302153_101556632	3300028574	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTD
Ga0302267_101605603	3300028745	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRLRGGGGQFTGDI
Ga0302202_100384305	3300028762	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILSGEVCIIDVSTDEPTYLVRLPG
Ga0302279_102838952	3300028783	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAY
Ga0302278_101272263	3300028866	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRLRGGG
Ga0311368_102501762	3300029882	Palsa	MKDTVAFPVLSAAELEECAEFGTRCSFATGEDLFRAGAQPFDCYVILSGEVCIIDVSTDEPTLLIRY
Ga0311327_104216391	3300029883	Bog	MSQTPDQLNADLMADTVAFPVLSAAELQECAEFGTRCSFAAGEDLFRAGAQPLDCYVILSGEACIIDV
Ga0311329_101543842	3300029907	Bog	MQKINQTPDQLHTDQMKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRLRGGGTIHR
Ga0311341_101890583	3300029908	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRLRGGGTIHR
Ga0311341_103469251	3300029908	Bog	MNQIPDRLHADLMADTVAFPILSTAELEECAEFGTRCSFGAGEDLFRAGARPFDCYVILSGEVCIIDVSTDEPTRLIRLRE
Ga0311363_103245433	3300029922	Fen	MKDTVAFPVLSAAELEECAECGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRLRGGGTIHR
Ga0311328_111183232	3300029939	Bog	MNQTPDQLHADLRADTVAFPILSAAELEECAEFGTRCSFGAGEDLFRAGSHPFDCYVVLSGEVCIIDFSTDEPTYLIRLR
Ga0311342_103652823	3300029955	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRLRGGQF
Ga0311342_113141141	3300029955	Bog	NRNGDPDVRPIQTIQKMNQTSDQPHADLMADTVAFPILSAAELEECAEFGARCSFAAGEDLFRAGALPFDCFVILMGEVCIIDVSTDEPTYLIRLLGGAIHG
Ga0265324_101919602	3300029957	Rhizosphere	MNQTPDQLHADQMKDTVAFPVLSAAELEECAEFGTRCSFAVGEDLFRAGAQPFDCYVILSGEVCIIDVSTDEPSCL
Ga0302304_101851001	3300029993	Palsa	VQLEQLPYQVNKQKMNQTPDQLHTDQMKDTVAFPVLSAAELEECAEFGTRCSFAAGDDLFQAGAQPFDCYVILSGEVCI
Ga0311338_101762641	3300030007	Palsa	VQLEQLPYQVNKQKMNHTPDQLHTDQMKDKVAFPVLSAAELEECAEFGTRCSFAPGEDLFRAGAQPFDCYVILSGEVCIIDISTDEPTYLVRLRG
Ga0302270_102775151	3300030011	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRLR
Ga0311344_104450911	3300030020	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFTAGEDLFRACAQPFDCYVILSGEVCIIDVLTDEPAYLVRL
Ga0311370_118030732	3300030503	Palsa	MNQTPDQLHTDQMKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILSGEVCIIDV
Ga0302275_100828914	3300030518	Bog	MKDTVAFPVLSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILSGEVCIIDVSTDEPTYLVRL
Ga0311372_109068461	3300030520	Palsa	MNQTPDQLQTDQMADTAAFPVLSAAELEECAEFGTRCSFAAGEDLFQAGAQPFDCYVILSGEVCIVDVLTDEPTSLVRLRGGQF
Ga0311372_130653612	3300030520	Palsa	MNRAIGDSSDLMKDTVAFPVLSAAELEECAEFGTRCSFAAGDDLFQAGAQPFDCYVILSGEVCIVDVST
Ga0073994_100218151	3300030991	Soil	MNQTRDQLLADLIADTVAFPVLSAAELAECTEFGTRCSFTAGEEIFGAGSQSFDCYVIVSGDVCIMDVSTDEPTCIVRY
Ga0073994_100577612	3300030991	Soil	MADTVAFPVLSAAELAECTEFGTRCSFAAGEEIFGAGSQSFDCYVIVSGDVCIMDVST
Ga0170824_1149549052	3300031231	Forest Soil	MNQTQVQLQADLMADTVAFPVLSAAELAECTEFGTRCSFASGEEIFGVGSQSFDCYVIVLGDVCIVDVSTDEPTCIVRLGAGQLT
Ga0302325_119478032	3300031234	Palsa	MNQTPDQLHADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCMMDVSTDEPTCIVRYGA
Ga0302318_106914672	3300031258	Bog	MNQIPDRLHADLMADTVAFPILSTAELEECAEFGTRCSFGAGEDLFRAGARPFDCYVILSGEVCIIDVSTDE
Ga0170819_118406353	3300031469	Forest Soil	MMADTVAFPVLSAAELEECAEFGTCCSFAAGEDLFRAGAQPFDCYVILSGEVCIIDVSTDVHLTVYD
Ga0302320_106573922	3300031524	Bog	RPLQTIQKMNQTSDQPHADLMADTVAFPILSAAELEECAEFGARCSFAAGEDLFRAGALPFDCFVILMGEVCIIDVSTDEPTYLIRLLGGAIHG
Ga0302326_123850561	3300031525	Palsa	VQLEQLPYRVNKQKMNQTPDQPQTDLMKDTVAFPVLSAAELEECADFGTRCSFAAGEDLFRAGAQPFDCYVILSGEVCIIDVST
Ga0302326_135358322	3300031525	Palsa	MNQTPDQLHADLMADTVAFPILSAAELEECAEFGTRCSFAAGEDLFRAGAQPFDCYVILLGEVCIIDVSTDEPTY
Ga0302326_135731752	3300031525	Palsa	MNQTPDQLHADLMADTVAFPVLSAAELEQCTEFGTRCSFASGEELFGAGSQSFDCYVIVSGDVCMMDVSTDEPTCIVRYGAGQCTG
Ga0310686_1197929753	3300031708	Soil	MADTVAFPVLSAAELAECTEFGTRCSFAPGEEIFGAGSQSFDCYVIVLGDVCIMDVS
Ga0302315_107668921	3300031837	Palsa	MNQTPDQLHADLTADTVAFPVLSAAELQECAEFGTRCSFAAGEDLFRAGAQPFDCYVILLGEVCIIDVSTDEPTY
Ga0370483_0041772_1230_1424	3300034124	Untreated Peat Soil	MSVNKQKMNQTPDKLDADLMADTVAFPVLSAAELEECAEFGTRCSFAEGEDLFRAGDQPLDCYVI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088389

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences